F357181

General Info

Members Datasets Scaffolds Average Seq Length
245 146 246 221

Family's Representative Sequence

Representative Sequence 3300005535|Ga0070684_100228931|Ga0070684_1002289312
Length 225
Sequence MRLLLVEDEPKMASLLRSGLRDEGVLVDIAVNGREGVWAATENAYDVVIIDVMLPDVDGFDVCRSIRSTDETTPILMLTARSAVGDRVVGLDAGADDYLVKPFAFDELLARLRALMRRGPVSRASVLAVGELRLDPVGRRVWRGEHEIVLTAQEFALLQTLARRPGQVLTRQQLTHLAWDIAREEHSNIVDACVRGLRNRVDRPFGRHSVQTVRGVGYRLSADDS

Samples

Sample ID Description Type Environment
1 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
34 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
35 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
36 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
37 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
38 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
39 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
53 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
56 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
62 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
93 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
94 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
95 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
96 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
97 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
98 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
99 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
100 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
101 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
102 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
103 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
104 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
105 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
106 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
107 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
108 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
109 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
110 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
111 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
112 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
113 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
114 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
115 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
116 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
117 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
118 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
119 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
120 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
121 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
122 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
123 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
124 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
125 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
126 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
127 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
128 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
129 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
130 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
131 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
132 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
133 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
134 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
135 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
136 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
137 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
138 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
139 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
140 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
141 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
142 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
143 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
144 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
145 3300053722 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 endosphere Metagenome Endosphere
146 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 38.37
Nodule 0
Rhizoplane 2.45
Rhizosphere 56.33
Stem 0
Stem Tuber 0
Unclassified 2.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1000653 3300001915 Bacteria 10485
2 JGI24741J21665_1002077 3300001915 Bacteria 5358
3 JGI24740J21852_10018820 3300001979 Bacteria 2442
4 JGI24737J22298_10000142 3300001990 Bacteria 22268
5 JGI24735J21928_10000025 3300002067 Bacteria 88931
6 JGI24742J22300_10000019 3300002244 Bacteria 26386
7 rootH2_10000311 3300003320 Bacteria 277677
8 rootH2_10114376 3300003320 Bacteria 4718
9 rootL2_10190440 3300003322 Bacteria 9397
10 rootH1_10142626 3300003316 Bacteria 4419
11 rootH1_10142626 3300003323 Unclassified 1855
12 rootH1_10271579 3300003323 Bacteria 4298
13 Ga0065704_10126636 3300005289 Bacteria 1677
14 Ga0070658_10000023 3300005327 Bacteria 185522
15 Ga0070658_10026444 3300005327 Bacteria 4655
16 Ga0070683_100000349 3300005329 Bacteria 31812
17 Ga0070670_100110808 3300005331 Bacteria 2365
18 Ga0068869_100410537 3300005334 Bacteria 1115
19 Ga0070682_100227175 3300005337 Unclassified 1332
20 Ga0070675_100363569 3300005354 Unclassified 1285
21 Ga0070671_100000001 3300005355 Bacteria 1228151
22 Ga0070671_100724764 3300005355 Bacteria 863
23 Ga0070674_100007728 3300005356 Bacteria 6351
24 Ga0070674_100114233 3300005356 Unclassified 1988
25 Ga0070673_100000034 3300005364 Bacteria 59468
26 Ga0070688_100275707 3300005365 Unclassified 1206
27 Ga0070667_100000001 3300005367 Bacteria 1108638
28 Ga0070667_100000594 3300005367 Bacteria 35374
29 Ga0070663_100058631 3300005455 Unclassified 2765
30 Ga0070678_100008066 3300005456 Bacteria 6283
31 Ga0070678_100129430 3300005456 Bacteria 2003
32 Ga0070681_10005783 3300005458 Bacteria 11962
33 Ga0068867_100010888 3300005459 Bacteria 6415
34 Ga0070685_10001602 3300005466 Bacteria 11930
35 Ga0070684_100008603 3300005535 Bacteria 7995
36 Ga0070684_100228931 3300005535 Bacteria 1697
37 Ga0070665_100040325 3300005548 Unclassified 4694
38 Ga0068855_100000001 3300005563 Bacteria 818777
39 Ga0068856_100000508 3300005614 Bacteria 43002
40 Ga0068856_100009453 3300005614 Bacteria 9467
41 Ga0068852_100153270 3300005616 Bacteria 2145
42 Ga0068860_100011972 3300005843 Bacteria 8547
43 Ga0075365_10000007 3300006038 Bacteria 116889
44 Ga0075365_10074458 3300006038 Unclassified 2290
45 Ga0075365_10240256 3300006038 Unclassified 1272
46 Ga0075368_10000088 3300006042 Bacteria 22805
47 Ga0075363_100000029 3300006048 Bacteria 27762
48 Ga0075364_10000008 3300006051 Bacteria 69045
49 Ga0075364_10030172 3300006051 Unclassified 3479
50 Ga0075364_10098793 3300006051 Bacteria 1942
51 Ga0075364_10109828 3300006051 Bacteria 1839
52 Ga0075364_10163489 3300006051 Bacteria 1503
53 Ga0075362_10000354 3300006177 Bacteria 13173
54 Ga0075362_10175343 3300006177 Bacteria 1037
55 Ga0075367_10000007 3300006178 Bacteria 45077
56 Ga0075367_10000242 3300006178 Bacteria 18517
57 Ga0075367_10087620 3300006178 Bacteria 1891
58 Ga0075369_10000004 3300006186 Bacteria 154675
59 Ga0075369_10001100 3300006186 Bacteria 9077
60 Ga0075369_10116172 3300006186 Bacteria 1209
61 Ga0075366_10000003 3300006195 Bacteria 114017
62 Ga0075366_10000108 3300006195 Bacteria 33670
63 Ga0075366_10000137 3300006195 Bacteria 30735
64 Ga0075366_10000809 3300006195 Bacteria 14998
65 Ga0075366_10002319 3300006195 Bacteria 9728
66 Ga0075366_10110616 3300006195 Bacteria 1652
67 Ga0075366_10201720 3300006195 Bacteria 1210
68 Ga0097621_100000130 3300006237 Bacteria 44188
69 Ga0075370_10000063 3300006353 Bacteria 32195
70 Ga0075370_10165882 3300006353 Bacteria 1297
71 Ga0068871_100000006 3300006358 Bacteria 116822
72 Ga0068871_100216712 3300006358 Unclassified 1657
73 Ga0068865_100757528 3300006881 Unclassified 834
74 Ga0105240_10000003 3300009093 Bacteria 1183681
75 Ga0105240_10002724 3300009093 Bacteria 28026
76 Ga0105245_10000007 3300009098 Bacteria 312285
77 Ga0105245_10000618 3300009098 Bacteria 32225
78 Ga0105245_10006760 3300009098 Bacteria 10058
79 Ga0105245_10107769 3300009098 Bacteria 2587
80 Ga0105245_10229761 3300009098 Bacteria 1794
81 Ga0105243_10000001 3300009148 Bacteria 1156578
82 Ga0105241_10000009 3300009174 Bacteria 258876
83 Ga0105241_10187457 3300009174 Bacteria 1720
84 Ga0105242_10000001 3300009176 Bacteria 574039
85 Ga0105242_10001221 3300009176 Bacteria 20284
86 Ga0105242_10214233 3300009176 Unclassified 1718
87 Ga0105237_10423917 3300009545 Bacteria 1336
88 Ga0105238_10030485 3300009551 Bacteria 5490
89 Ga0105238_10670364 3300009551 Bacteria 1048
90 Ga0105238_10781382 3300009551 Bacteria 970
91 Ga0105249_10005213 3300009553 Bacteria 11219
92 Ga0105249_10036315 3300009553 Bacteria 4469
93 Ga0105249_10288074 3300009553 Unclassified 1643
94 Ga0105033_100050 3300009986 Bacteria 8788
95 Ga0105028_103885 3300009993 Bacteria 1562
96 Ga0105239_10030796 3300010375 Bacteria 5901
97 Ga0105239_10244170 3300010375 Unclassified 2016
98 Ga0157373_10000168 3300013100 Bacteria 53355
99 Ga0157371_10009435 3300013102 Bacteria 7680
100 Ga0157369_10000273 3300013105 Bacteria 69535
101 Ga0157369_10269209 3300013105 Bacteria 1776
102 Ga0157374_10000014 3300013296 Bacteria 396846
103 Ga0157374_10000561 3300013296 Bacteria 32999
104 Ga0157374_10005852 3300013296 Bacteria 10387
105 Ga0157374_10128021 3300013296 Unclassified 2455
106 Ga0157374_10149012 3300013296 Unclassified 2274
107 Ga0157378_10019169 3300013297 Bacteria 6012
108 Ga0163163_10037948 3300014325 Bacteria 4690
109 Ga0157380_10096331 3300014326 Bacteria 2453
110 Ga0157377_10006139 3300014745 Bacteria 5707
111 Ga0157377_10012990 3300014745 Bacteria 4203
112 Ga0157376_10000001 3300014969 Bacteria 842910
113 Ga0207647_10001312 3300025904 Bacteria 19117
114 Ga0207705_10000231 3300025909 Bacteria 55679
115 Ga0207705_10010696 3300025909 Bacteria 6662
116 Ga0207654_10000002 3300025911 Bacteria 1460142
117 Ga0207654_10103870 3300025911 Bacteria 1755
118 Ga0207707_10010143 3300025912 Bacteria 8175
119 Ga0207695_10000005 3300025913 Bacteria 1196715
120 Ga0207695_10055828 3300025913 Unclassified 4113
121 Ga0207650_10272015 3300025925 Bacteria 1377
122 Ga0207659_10267357 3300025926 Unclassified 1394
123 Ga0207687_10000008 3300025927 Bacteria 497738
124 Ga0207687_10000857 3300025927 Bacteria 20568
125 Ga0207687_10029984 3300025927 Unclassified 3663
126 Ga0207687_10240206 3300025927 Bacteria 1435
127 Ga0207687_10324908 3300025927 Bacteria 1246
128 Ga0207644_10000001 3300025931 Bacteria 1243214
129 Ga0207686_10000001 3300025934 Bacteria 1169580
130 Ga0207686_10001985 3300025934 Bacteria 11278
131 Ga0207686_10151023 3300025934 Unclassified 1617
132 Ga0207709_10000002 3300025935 Bacteria 1171536
133 Ga0207704_10019406 3300025938 Unclassified 3570
134 Ga0207691_10005744 3300025940 Bacteria 12003
135 Ga0207689_10110804 3300025942 Bacteria 2256
136 Ga0207661_10000287 3300025944 Bacteria 31844
137 Ga0207667_10000003 3300025949 Bacteria 822935
138 Ga0207651_10112007 3300025960 Unclassified 2050
139 Ga0207712_10004049 3300025961 Bacteria 9259
140 Ga0207712_10699936 3300025961 Bacteria 884
141 Ga0207658_10000003 3300025986 Bacteria 1151934
142 Ga0207658_10071082 3300025986 Bacteria 2634
143 Ga0207678_10086109 3300026067 Unclassified 2685
144 Ga0207702_10002370 3300026078 Bacteria 17996
145 Ga0207702_10013050 3300026078 Bacteria 6911
146 Ga0207702_10465035 3300026078 Bacteria 1229
147 Ga0207641_10041782 3300026088 Unclassified 3844
148 Ga0207648_10027379 3300026089 Bacteria 5060
149 Ga0207683_10016374 3300026121 Bacteria 6309
150 Ga0207698_10128916 3300026142 Bacteria 2158
151 Ga0209813_10000003 3300027866 Bacteria 207060
152 Ga0268266_10002107 3300028379 Bacteria 21977
153 Ga0268266_10071916 3300028379 Unclassified 2998
154 Ga0268264_10002081 3300028381 Bacteria 17870
155 Ga0265319_1070550 3300028563 Unclassified 1120
156 Ga0265334_10000041 3300028573 Bacteria 98258
157 Ga0265338_10003570 3300028800 Bacteria 21750
158 Ga0265338_10006085 3300028800 Viruses 15495
159 Ga0265338_10092187 3300028800 Bacteria 2500
160 Ga0265340_10000311 3300031247 Bacteria 25668
161 Ga0265313_10199479 3300031595 Bacteria 833
162 Ga0307516_10127507 3300031730 Bacteria 2328
163 Ga0395900_0109873 3300037418 Bacteria 2833
164 Ga0395898_1136048 3300037466 Bacteria 714
165 Ga0395905_0002998 3300037471 Bacteria 18308
166 Ga0395901_0003777 3300038443 Bacteria 15254
167 Ga0451807_1183158 3300041486 Bacteria 2050
168 Ga0495628_0246863 3300046516 Unclassified 1334
169 Ga0495588_0000322 3300046674 Bacteria 31828
170 Ga0495658_0474785 3300046683 Unclassified 799
171 Ga0495671_0122554 3300046692 Bacteria 1268
172 Ga0495649_0000025 3300046694 Bacteria 175449
173 Ga0495672_0000323 3300047320 Bacteria 63547
174 Ga0495672_0059562 3300047320 Bacteria 2209
175 Ga0496105_0318171 3300048908 Unclassified 1248
176 Ga0496108_0154884 3300048911 Bacteria 1979
177 Ga0496109_0093213 3300048912 Unclassified 2787
178 Ga0496110_0643765 3300048913 Bacteria 960
179 Ga0496112_0078434 3300048915 Unclassified 3266
180 Ga0496126_0645521 3300048929 Bacteria 829
181 nmdc:mga03683_43_c1 3300050489 Bacteria 16741
182 nmdc:mga03683_50075_c1 3300050489 Bacteria 729
183 nmdc:mga03n38_181_c1 3300050490 Bacteria 14176
184 nmdc:mga00v17_175932_c1 3300050491 Bacteria 1380
185 nmdc:mga00v17_24826_c1 3300050491 Unclassified 3479
186 nmdc:mga00v17_34187_c1 3300050491 Bacteria 3017
187 nmdc:mga00v17_8274_c1 3300050491 Bacteria 5200
188 nmdc:mga0yw44_117899_c1 3300050492 Bacteria 1707
189 nmdc:mga0yw44_7_c1 3300050492 Bacteria 260877
190 nmdc:mga0yw44_80553_c1 3300050492 Bacteria 2040
191 nmdc:mga0yw44_98744_c1 3300050492 Unclassified 1857
192 nmdc:mga0k408_15_c1 3300050493 Bacteria 124193
193 nmdc:mga0k408_1794_c1 3300050493 Bacteria 11080
194 nmdc:mga0k408_181_c1 3300050493 Bacteria 33119
195 nmdc:mga0k408_1_c1 3300050493 Bacteria 1089059
196 nmdc:mga0k408_245455_c1 3300050493 Bacteria 1069
197 nmdc:mga0k408_263791_c1 3300050493 Bacteria 1028
198 nmdc:mga0k408_56_c1 3300050493 Bacteria 57024
199 nmdc:mga0k408_59_c1 3300050493 Bacteria 39640
200 nmdc:mga06z11_144_c1 3300050494 Bacteria 28448
201 nmdc:mga06z11_2_c1 3300050494 Bacteria 169056
202 nmdc:mga06z11_56769_c1 3300050494 Bacteria 2026
203 nmdc:mga04h51_3164_c1 3300050495 Bacteria 3973
204 nmdc:mga04h51_3_c1 3300050495 Bacteria 207078
205 nmdc:mga07m45_155257_c1 3300050496 Bacteria 1328
206 nmdc:mga07m45_31159_c1 3300050496 Unclassified 2954
207 nmdc:mga07m45_44962_c1 3300050496 Bacteria 2479
208 nmdc:mga0sz30_10_c3 3300050516 Bacteria 40799
209 nmdc:mga0sz30_2_c1 3300050516 Bacteria 626403
210 nmdc:mga0sz30_3037_c2 3300050516 Bacteria 5590
211 Ga0500610_0000011 3300053079 Bacteria 91172
212 Ga0500610_0123031 3300053079 Bacteria 1325
213 Ga0500643_000061 3300053087 Bacteria 127538
214 Ga0500643_000102 3300053087 Bacteria 88029
215 Ga0500643_002543 3300053087 Bacteria 9306
216 Ga0500644_0000197 3300053088 Bacteria 37504
217 Ga0500644_0000612 3300053088 Bacteria 13424
218 Ga0500644_0008221 3300053088 Bacteria 2748
219 Ga0500646_0004656 3300053090 Bacteria 3467
220 Ga0500583_0000085 3300053092 Bacteria 52578
221 Ga0500583_0163156 3300053092 Bacteria 1110
222 Ga0500651_0000011 3300053093 Bacteria 246573
223 Ga0500651_0106283 3300053093 Bacteria 1716
224 Ga0500641_0172745 3300053096 Unclassified 930
225 Ga0500650_0000018 3300053098 Bacteria 70093
226 Ga0500555_000001 3300053103 Bacteria 1353713
227 Ga0500555_000002 3300053103 Bacteria 1314346
228 Ga0500562_000002 3300053108 Bacteria 977234
229 Ga0500594_0000001 3300053118 Bacteria 1178472
230 Ga0500594_0000021 3300053118 Bacteria 54302
231 Ga0500614_000001 3300053123 Bacteria 1274484
232 Ga0500614_042141 3300053123 Bacteria 1165
233 Ga0500628_000005 3300053129 Bacteria 201423
234 Ga0500628_011514 3300053129 Bacteria 1610
235 Ga0500642_0000289 3300053130 Bacteria 18350
236 Ga0500652_000093 3300053131 Bacteria 37239
237 Ga0500655_000677 3300053133 Bacteria 6762
238 Ga0500561_0000002 3300053137 Bacteria 394147
239 Ga0500568_0004708 3300053139 Bacteria 7239
240 Ga0500577_0000374 3300053142 Bacteria 11367
241 Ga0500577_0001830 3300053142 Bacteria 5432
242 Ga0500589_000003 3300053147 Bacteria 220717
243 Ga0500633_0005463 3300053160 Bacteria 3023
244 Ga0500649_000006 3300053722 Bacteria 116211
245 Ga0500611_001595 3300053727 Bacteria 2539
246 Ga0500611_004561 3300053727 Unclassified 1877

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300026078 Ga0207702_10465035 Ga0207702_104650352 207
2 3300006186 Ga0075369_10000004 Ga0075369_1000000444 209
3 3300006358 Ga0068871_100000006 Ga0068871_10000000641 214
4 3300025927 Ga0207687_10000008 Ga0207687_10000008328 214
5 3300006038 Ga0075365_10074458 Ga0075365_100744582 217
6 3300006042 Ga0075368_10000088 Ga0075368_100000883 217
7 3300006048 Ga0075363_100000029 Ga0075363_10000002914 217
8 3300006178 Ga0075367_10000242 Ga0075367_100002423 217
9 3300006186 Ga0075369_10116172 Ga0075369_101161722 217
10 3300006353 Ga0075370_10000063 Ga0075370_1000006338 217
11 3300027866 Ga0209813_10000003 Ga0209813_10000003149 217
12 3300050490 nmdc:mga03n38_181_c1 nmdc:mga03n38_181_c1_9184_9837 217
13 3300050494 nmdc:mga06z11_2_c1 nmdc:mga06z11_2_c1_31316_31969 217
14 3300050495 nmdc:mga04h51_3_c1 nmdc:mga04h51_3_c1_69336_69989 217
15 3300050496 nmdc:mga07m45_44962_c1 nmdc:mga07m45_44962_c1_1468_2121 217
16 3300050516 nmdc:mga0sz30_3037_c2 nmdc:mga0sz30_3037_c2_1347_2000 217
17 3300003320 rootH2_10000311 rootH2_10000311223 218
18 3300003320 rootH2_10114376 rootH2_101143763 218
19 3300003323 rootH1_10142626 rootH1_101426261 218
20 3300005289 Ga0065704_10126636 Ga0065704_101266361 218
21 3300005334 Ga0068869_100410537 Ga0068869_1004105372 218
22 3300005367 Ga0070667_100000594 Ga0070667_10000059425 218
23 3300005535 Ga0070684_100228931 Ga0070684_1002289312 218
24 3300006051 Ga0075364_10000008 Ga0075364_1000000868 218
25 3300006178 Ga0075367_10087620 Ga0075367_100876202 218
26 3300006195 Ga0075366_10000137 Ga0075366_1000013731 218
27 3300006195 Ga0075366_10002319 Ga0075366_100023194 218
28 3300006237 Ga0097621_100000130 Ga0097621_10000013027 218
29 3300006353 Ga0075370_10165882 Ga0075370_101658822 218
30 3300009098 Ga0105245_10000007 Ga0105245_10000007328 218
31 3300009551 Ga0105238_10670364 Ga0105238_106703642 218
32 3300009551 Ga0105238_10781382 Ga0105238_107813822 218
33 3300009553 Ga0105249_10005213 Ga0105249_100052138 218
34 3300013296 Ga0157374_10000014 Ga0157374_10000014328 218
35 3300013296 Ga0157374_10005852 Ga0157374_100058526 218
36 3300014325 Ga0163163_10037948 Ga0163163_100379483 218
37 3300014745 Ga0157377_10012990 Ga0157377_100129903 218
38 3300025942 Ga0207689_10110804 Ga0207689_101108042 218
39 3300025961 Ga0207712_10004049 Ga0207712_100040499 218
40 3300025986 Ga0207658_10071082 Ga0207658_100710823 218
41 3300031730 Ga0307516_10127507 Ga0307516_101275073 218
42 3300046692 Ga0495671_0122554 Ga0495671_0122554_585_1241 218
43 3300047320 Ga0495672_0059562 Ga0495672_0059562_1054_1710 218
44 3300048911 Ga0496108_0154884 Ga0496108_0154884_1137_1814 218
45 3300048913 Ga0496110_0643765 Ga0496110_0643765_101_778 218
46 3300050491 nmdc:mga00v17_175932_c1 nmdc:mga00v17_175932_c1_67_723 218
47 3300050493 nmdc:mga0k408_1794_c1 nmdc:mga0k408_1794_c1_8384_9040 218
48 3300050493 nmdc:mga0k408_59_c1 nmdc:mga0k408_59_c1_11056_11721 218
49 3300050494 nmdc:mga06z11_56769_c1 nmdc:mga06z11_56769_c1_1101_1757 218
50 3300050496 nmdc:mga07m45_155257_c1 nmdc:mga07m45_155257_c1_218_874 218
51 3300050516 nmdc:mga0sz30_2_c1 nmdc:mga0sz30_2_c1_183201_183857 218
52 3300053079 Ga0500610_0000011 Ga0500610_0000011_27159_27815 218
53 3300053079 Ga0500610_0123031 Ga0500610_0123031_24_680 218
54 3300053087 Ga0500643_002543 Ga0500643_002543_6076_6732 218
55 3300053088 Ga0500644_0000197 Ga0500644_0000197_33816_34472 218
56 3300053088 Ga0500644_0000612 Ga0500644_0000612_4732_5388 218
57 3300053092 Ga0500583_0000085 Ga0500583_0000085_24041_24697 218
58 3300053092 Ga0500583_0163156 Ga0500583_0163156_17_673 218
59 3300053096 Ga0500641_0172745 Ga0500641_0172745_181_837 218
60 3300053103 Ga0500555_000001 Ga0500555_000001_114991_115647 218
61 3300053103 Ga0500555_000002 Ga0500555_000002_1178781_1179437 218
62 3300053118 Ga0500594_0000021 Ga0500594_0000021_4421_5077 218
63 3300053129 Ga0500628_000005 Ga0500628_000005_167821_168477 218
64 3300053129 Ga0500628_011514 Ga0500628_011514_840_1496 218
65 3300053130 Ga0500642_0000289 Ga0500642_0000289_6238_6894 218
66 3300053131 Ga0500652_000093 Ga0500652_000093_33322_33978 218
67 3300053142 Ga0500577_0001830 Ga0500577_0001830_1732_2388 218
68 3300053147 Ga0500589_000003 Ga0500589_000003_108678_109334 218
69 3300053727 Ga0500611_001595 Ga0500611_001595_1784_2440 218
70 3300025904 Ga0207647_10001312 Ga0207647_100013128 219
71 3300050493 nmdc:mga0k408_263791_c1 nmdc:mga0k408_263791_c1_268_930 219
72 3300053087 Ga0500643_000102 Ga0500643_000102_50350_51009 219
73 3300053139 Ga0500568_0004708 Ga0500568_0004708_2544_3203 219
74 3300001915 JGI24741J21665_1000653 JGI24741J21665_100065311 220
75 3300001915 JGI24741J21665_1002077 JGI24741J21665_10020772 220
76 3300001979 JGI24740J21852_10018820 JGI24740J21852_100188202 220
77 3300001990 JGI24737J22298_10000142 JGI24737J22298_1000014223 220
78 3300002067 JGI24735J21928_10000025 JGI24735J21928_100000256 220
79 3300002244 JGI24742J22300_10000019 JGI24742J22300_1000001914 220
80 3300003322 rootL2_10190440 rootL2_101904407 220
81 3300003323 rootH1_10271579 rootH1_102715792 220
82 3300005327 Ga0070658_10000023 Ga0070658_10000023145 220
83 3300005327 Ga0070658_10026444 Ga0070658_100264444 220
84 3300005329 Ga0070683_100000349 Ga0070683_10000034917 220
85 3300005331 Ga0070670_100110808 Ga0070670_1001108082 220
86 3300005337 Ga0070682_100227175 Ga0070682_1002271752 220
87 3300005354 Ga0070675_100363569 Ga0070675_1003635692 220
88 3300005355 Ga0070671_100000001 Ga0070671_1000000011195 220
89 3300005355 Ga0070671_100724764 Ga0070671_1007247641 220
90 3300005356 Ga0070674_100007728 Ga0070674_1000077282 220
91 3300005356 Ga0070674_100114233 Ga0070674_1001142331 220
92 3300005364 Ga0070673_100000034 Ga0070673_10000003456 220
93 3300005365 Ga0070688_100275707 Ga0070688_1002757072 220
94 3300005367 Ga0070667_100000001 Ga0070667_100000001117 220
95 3300005455 Ga0070663_100058631 Ga0070663_1000586312 220
96 3300005456 Ga0070678_100008066 Ga0070678_1000080664 220
97 3300005456 Ga0070678_100129430 Ga0070678_1001294303 220
98 3300005458 Ga0070681_10005783 Ga0070681_1000578311 220
99 3300005459 Ga0068867_100010888 Ga0068867_1000108885 220
100 3300005466 Ga0070685_10001602 Ga0070685_100016024 220
101 3300005535 Ga0070684_100008603 Ga0070684_1000086035 220
102 3300005548 Ga0070665_100040325 Ga0070665_1000403255 220
103 3300005563 Ga0068855_100000001 Ga0068855_100000001771 220
104 3300005614 Ga0068856_100000508 Ga0068856_10000050837 220
105 3300005614 Ga0068856_100009453 Ga0068856_1000094535 220
106 3300005616 Ga0068852_100153270 Ga0068852_1001532702 220
107 3300005843 Ga0068860_100011972 Ga0068860_1000119727 220
108 3300006038 Ga0075365_10000007 Ga0075365_10000007116 220
109 3300006038 Ga0075365_10240256 Ga0075365_102402562 220
110 3300006051 Ga0075364_10030172 Ga0075364_100301724 220
111 3300006051 Ga0075364_10098793 Ga0075364_100987932 220
112 3300006051 Ga0075364_10109828 Ga0075364_101098282 220
113 3300006051 Ga0075364_10163489 Ga0075364_101634892 220
114 3300006177 Ga0075362_10000354 Ga0075362_100003546 220
115 3300006177 Ga0075362_10175343 Ga0075362_101753432 220
116 3300006178 Ga0075367_10000007 Ga0075367_1000000719 220
117 3300006186 Ga0075369_10001100 Ga0075369_100011005 220
118 3300006195 Ga0075366_10000003 Ga0075366_1000000310 220
119 3300006195 Ga0075366_10000108 Ga0075366_100001085 220
120 3300006195 Ga0075366_10000809 Ga0075366_100008099 220
121 3300006195 Ga0075366_10110616 Ga0075366_101106162 220
122 3300006195 Ga0075366_10201720 Ga0075366_102017202 220
123 3300006358 Ga0068871_100216712 Ga0068871_1002167123 220
124 3300006881 Ga0068865_100757528 Ga0068865_1007575281 220
125 3300009093 Ga0105240_10000003 Ga0105240_10000003124 220
126 3300009093 Ga0105240_10002724 Ga0105240_100027245 220
127 3300009098 Ga0105245_10000618 Ga0105245_1000061828 220
128 3300009098 Ga0105245_10006760 Ga0105245_100067605 220
129 3300009098 Ga0105245_10107769 Ga0105245_101077692 220
130 3300009098 Ga0105245_10229761 Ga0105245_102297612 220
131 3300009148 Ga0105243_10000001 Ga0105243_100000011126 220
132 3300009174 Ga0105241_10000009 Ga0105241_10000009146 220
133 3300009174 Ga0105241_10187457 Ga0105241_101874572 220
134 3300009176 Ga0105242_10000001 Ga0105242_10000001132 220
135 3300009176 Ga0105242_10001221 Ga0105242_1000122119 220
136 3300009176 Ga0105242_10214233 Ga0105242_102142332 220
137 3300009545 Ga0105237_10423917 Ga0105237_104239172 220
138 3300009551 Ga0105238_10030485 Ga0105238_100304855 220
139 3300009553 Ga0105249_10036315 Ga0105249_100363152 220
140 3300009553 Ga0105249_10288074 Ga0105249_102880742 220
141 3300009986 Ga0105033_100050 Ga0105033_10005011 220
142 3300009993 Ga0105028_103885 Ga0105028_1038852 220
143 3300010375 Ga0105239_10030796 Ga0105239_100307962 220
144 3300010375 Ga0105239_10244170 Ga0105239_102441703 220
145 3300013100 Ga0157373_10000168 Ga0157373_1000016853 220
146 3300013102 Ga0157371_10009435 Ga0157371_100094352 220
147 3300013105 Ga0157369_10000273 Ga0157369_1000027325 220
148 3300013105 Ga0157369_10269209 Ga0157369_102692092 220
149 3300013296 Ga0157374_10000561 Ga0157374_1000056113 220
150 3300013296 Ga0157374_10128021 Ga0157374_101280213 220
151 3300013296 Ga0157374_10149012 Ga0157374_101490123 220
152 3300013297 Ga0157378_10019169 Ga0157378_100191696 220
153 3300014326 Ga0157380_10096331 Ga0157380_100963312 220
154 3300014745 Ga0157377_10006139 Ga0157377_1000613910 220
155 3300014969 Ga0157376_10000001 Ga0157376_10000001783 220
156 3300025909 Ga0207705_10000231 Ga0207705_1000023146 220
157 3300025909 Ga0207705_10010696 Ga0207705_100106963 220
158 3300025911 Ga0207654_10000002 Ga0207654_10000002132 220
159 3300025911 Ga0207654_10103870 Ga0207654_101038702 220
160 3300025912 Ga0207707_10010143 Ga0207707_100101435 220
161 3300025913 Ga0207695_10000005 Ga0207695_10000005131 220
162 3300025913 Ga0207695_10055828 Ga0207695_100558285 220
163 3300025925 Ga0207650_10272015 Ga0207650_102720152 220
164 3300025926 Ga0207659_10267357 Ga0207659_102673572 220
165 3300025927 Ga0207687_10000857 Ga0207687_1000085712 220
166 3300025927 Ga0207687_10029984 Ga0207687_100299844 220
167 3300025927 Ga0207687_10240206 Ga0207687_102402061 220
168 3300025927 Ga0207687_10324908 Ga0207687_103249082 220
169 3300025931 Ga0207644_10000001 Ga0207644_10000001240 220
170 3300025934 Ga0207686_10000001 Ga0207686_1000000114 220
171 3300025934 Ga0207686_10001985 Ga0207686_1000198512 220
172 3300025934 Ga0207686_10151023 Ga0207686_101510232 220
173 3300025935 Ga0207709_10000002 Ga0207709_10000002131 220
174 3300025938 Ga0207704_10019406 Ga0207704_100194062 220
175 3300025940 Ga0207691_10005744 Ga0207691_1000574414 220
176 3300025944 Ga0207661_10000287 Ga0207661_1000028716 220
177 3300025949 Ga0207667_10000003 Ga0207667_10000003754 220
178 3300025960 Ga0207651_10112007 Ga0207651_101120072 220
179 3300025961 Ga0207712_10699936 Ga0207712_106999362 220
180 3300025986 Ga0207658_10000003 Ga0207658_1000000345 220
181 3300026067 Ga0207678_10086109 Ga0207678_100861094 220
182 3300026078 Ga0207702_10002370 Ga0207702_1000237011 220
183 3300026078 Ga0207702_10013050 Ga0207702_1001305010 220
184 3300026088 Ga0207641_10041782 Ga0207641_100417823 220
185 3300026089 Ga0207648_10027379 Ga0207648_100273792 220
186 3300026121 Ga0207683_10016374 Ga0207683_100163744 220
187 3300026142 Ga0207698_10128916 Ga0207698_101289162 220
188 3300028379 Ga0268266_10002107 Ga0268266_100021072 220
189 3300028379 Ga0268266_10071916 Ga0268266_100719164 220
190 3300028381 Ga0268264_10002081 Ga0268264_100020817 220
191 3300028563 Ga0265319_1070550 Ga0265319_10705502 220
192 3300028573 Ga0265334_10000041 Ga0265334_1000004184 220
193 3300028800 Ga0265338_10003570 Ga0265338_1000357019 220
194 3300028800 Ga0265338_10006085 Ga0265338_100060855 220
195 3300028800 Ga0265338_10092187 Ga0265338_100921873 220
196 3300031247 Ga0265340_10000311 Ga0265340_1000031126 220
197 3300031595 Ga0265313_10199479 Ga0265313_101994792 220
198 3300037418 Ga0395900_0109873 Ga0395900_0109873_2139_2807 220
199 3300037466 Ga0395898_1136048 Ga0395898_1136048_34_702 220
200 3300037471 Ga0395905_0002998 Ga0395905_0002998_5474_6142 220
201 3300038443 Ga0395901_0003777 Ga0395901_0003777_9384_10052 220
202 3300041486 Ga0451807_1183158 Ga0451807_1183158_677_1339 220
203 3300046516 Ga0495628_0246863 Ga0495628_0246863_488_1150 220
204 3300046674 Ga0495588_0000322 Ga0495588_0000322_17256_17918 220
205 3300046683 Ga0495658_0474785 Ga0495658_0474785_41_709 220
206 3300046694 Ga0495649_0000025 Ga0495649_0000025_129932_130594 220
207 3300047320 Ga0495672_0000323 Ga0495672_0000323_29788_30450 220
208 3300048908 Ga0496105_0318171 Ga0496105_0318171_97_765 220
209 3300048912 Ga0496109_0093213 Ga0496109_0093213_867_1535 220
210 3300048915 Ga0496112_0078434 Ga0496112_0078434_1679_2347 220
211 3300048929 Ga0496126_0645521 Ga0496126_0645521_42_704 220
212 3300050489 nmdc:mga03683_43_c1 nmdc:mga03683_43_c1_3991_4653 220
213 3300050489 nmdc:mga03683_50075_c1 nmdc:mga03683_50075_c1_23_685 220
214 3300050491 nmdc:mga00v17_24826_c1 nmdc:mga00v17_24826_c1_1733_2395 220
215 3300050491 nmdc:mga00v17_34187_c1 nmdc:mga00v17_34187_c1_858_1520 220
216 3300050491 nmdc:mga00v17_8274_c1 nmdc:mga00v17_8274_c1_3536_4198 220
217 3300050492 nmdc:mga0yw44_117899_c1 nmdc:mga0yw44_117899_c1_228_890 220
218 3300050492 nmdc:mga0yw44_7_c1 nmdc:mga0yw44_7_c1_151598_152260 220
219 3300050492 nmdc:mga0yw44_80553_c1 nmdc:mga0yw44_80553_c1_799_1461 220
220 3300050492 nmdc:mga0yw44_98744_c1 nmdc:mga0yw44_98744_c1_572_1234 220
221 3300050493 nmdc:mga0k408_15_c1 nmdc:mga0k408_15_c1_46973_47635 220
222 3300050493 nmdc:mga0k408_181_c1 nmdc:mga0k408_181_c1_1497_2159 220
223 3300050493 nmdc:mga0k408_1_c1 nmdc:mga0k408_1_c1_108776_109438 220
224 3300050493 nmdc:mga0k408_245455_c1 nmdc:mga0k408_245455_c1_186_848 220
225 3300050493 nmdc:mga0k408_56_c1 nmdc:mga0k408_56_c1_51634_52296 220
226 3300050494 nmdc:mga06z11_144_c1 nmdc:mga06z11_144_c1_12072_12734 220
227 3300050495 nmdc:mga04h51_3164_c1 nmdc:mga04h51_3164_c1_3046_3708 220
228 3300050496 nmdc:mga07m45_31159_c1 nmdc:mga07m45_31159_c1_396_1058 220
229 3300050516 nmdc:mga0sz30_10_c3 nmdc:mga0sz30_10_c3_37543_38205 220
230 3300053087 Ga0500643_000061 Ga0500643_000061_16218_16880 220
231 3300053088 Ga0500644_0008221 Ga0500644_0008221_352_1020 220
232 3300053090 Ga0500646_0004656 Ga0500646_0004656_442_1110 220
233 3300053093 Ga0500651_0000011 Ga0500651_0000011_217182_217850 220
234 3300053093 Ga0500651_0106283 Ga0500651_0106283_986_1654 220
235 3300053098 Ga0500650_0000018 Ga0500650_0000018_9293_9961 220
236 3300053108 Ga0500562_000002 Ga0500562_000002_359168_359830 220
237 3300053118 Ga0500594_0000001 Ga0500594_0000001_531001_531669 220
238 3300053123 Ga0500614_000001 Ga0500614_000001_938052_938714 220
239 3300053123 Ga0500614_042141 Ga0500614_042141_318_986 220
240 3300053133 Ga0500655_000677 Ga0500655_000677_2426_3094 220
241 3300053137 Ga0500561_0000002 Ga0500561_0000002_273209_273871 220
242 3300053142 Ga0500577_0000374 Ga0500577_0000374_2617_3285 220
243 3300053160 Ga0500633_0005463 Ga0500633_0005463_1139_1807 220
244 3300053722 Ga0500649_000006 Ga0500649_000006_31527_32189 220
245 3300053727 Ga0500611_004561 Ga0500611_004561_345_1007 220

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

3

113

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
2d1v-assembly1.cif.gz_A crystal structure of dna-binding domain of bacillus subtilis yycf 0.938 126 219
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9353 1 120
2a9r-assembly1.cif.gz_A-2 rr02-rec phosphate in the active site 0.9328 1 120
8fk2-assembly1.cif.gz_B the n-terminal vicr from streptococcus mutans 0.931 2 119
3q15-assembly2.cif.gz_D-3 crystal structure of raph complexed with spo0f 0.9287 1 115
ID Description Score Start End Superfamily
af_Q2FXN6_3_86_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.982 1 84 3.40.50.2300
af_O07776_22_102_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9806 1 81 3.40.50.2300
af_P9WGN1_2_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.973 1 81 3.40.50.2300
af_Q2G2U6_3_86_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9712 1 85 3.40.50.2300
af_P23836_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9704 1 81 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A839JPS4-F1-model_v4 Response regulator transcription factor 0.7896 1 219 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A839JPS4-F1-model_v4 Response regulator transcription factor 0.7835 1 219 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A563DDZ0-F1-model_v4 Response regulator transcription factor 0.7777 1 219 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A563DDZ0-F1-model_v4 Response regulator transcription factor 0.7717 1 219 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A431KV11-F1-model_v4 Response regulator transcription factor 0.7415 1 220 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993

Feature Viewer

pLDDT pTM Quality
85.46 0.55 Medium
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Predicted Structure (AlphaFold2)

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