F356870

General Info

Members Datasets Scaffolds Average Seq Length
244 151 488 230

Family's Representative Sequence

Representative Sequence 3300049592|Ga0501076_0783560|Ga0501076_0783560_58_753
Length 231
Sequence LAKHIGIVACSAEGAALCYTTVCTEAPDLMGKKHAHPEVSMHTHPFSDYVRLMEAGRWDGVAALMLSSEAKLVKSGAELVICPDNTVHRVFEQVAKQAKLPWLHIAEEVAREAGRLGYKCVGLIGTQWTMESTFYKEKLDAYGVDIVLPGDKDRKLINRIIFDELVAAQFTAESRAYFTGIISEMRGQGCEGVVLGCTEVPLIITPENSPLPVLDSTRLLARAALHASLED

Samples

Sample ID Description Type Environment
1 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
4 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
52 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
53 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
54 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
55 3300022732 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU1 Metagenome Rhizosphere
56 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
57 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
59 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
85 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
86 3300028036 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
89 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
90 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
91 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
92 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
93 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
94 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
95 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
96 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
97 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
98 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
99 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
100 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
101 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
102 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
103 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
106 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
107 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
108 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
109 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
110 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
111 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
112 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
113 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
114 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
115 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
116 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
117 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
118 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
119 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
120 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
121 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
122 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
123 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
124 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
125 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
126 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
127 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
128 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
129 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
130 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
131 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
132 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
133 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
134 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
135 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
136 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
137 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
138 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
139 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
140 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
141 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
142 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
143 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
144 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
145 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
146 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
147 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
148 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
149 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
150 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
151 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.77
Metatranscriptomes 1.23
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.51
Nodule 0.82
Rhizoplane 3.69
Rhizosphere 89.34
Stem 0
Stem Tuber 0
Unclassified 12.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501076_0783560 3300049592 Bacteria 787
2 LJNas_1000041 3300000546 Bacteria 17117
3 Ga0055524_1008190 3300003775 Bacteria 4363
4 Ga0055531_10005827 3300003794 Bacteria 7127
5 Ga0068869_100002204 3300005334 Bacteria 11719
6 Ga0068869_100246180 3300005334 Bacteria 1426
7 Ga0070666_10017042 3300005335 Unclassified 4654
8 Ga0068868_100014300 3300005338 Bacteria 5846
9 Ga0068868_100025396 3300005338 Unclassified 4507
10 Ga0070709_10024805 3300005434 Bacteria 3535
11 Ga0070709_10025278 3300005434 Bacteria 3507
12 Ga0070713_100028061 3300005436 Bacteria 4441
13 Ga0070713_100073143 3300005436 Unclassified 2901
14 Ga0070713_100225602 3300005436 Bacteria 1701
15 Ga0070713_100795506 3300005436 Unclassified 906
16 Ga0070710_10007013 3300005437 Bacteria 5436
17 Ga0070710_10027255 3300005437 Bacteria 3045
18 Ga0070711_100015697 3300005439 Bacteria 4796
19 Ga0070711_100129307 3300005439 Bacteria 1879
20 Ga0070711_100131176 3300005439 Unclassified 1867
21 Ga0070708_100004519 3300005445 Bacteria 10952
22 Ga0070708_100053252 3300005445 Unclassified 3590
23 Ga0070708_100064420 3300005445 Bacteria 3284
24 Ga0070708_100404394 3300005445 Bacteria 1287
25 Ga0070681_10066174 3300005458 Bacteria 3582
26 Ga0070681_10535040 3300005458 Bacteria 1085
27 Ga0070706_100002374 3300005467 Bacteria 19022
28 Ga0070706_100003656 3300005467 Bacteria 15050
29 Ga0070706_100028654 3300005467 Bacteria 5128
30 Ga0070706_100034180 3300005467 Bacteria 4695
31 Ga0070706_100053713 3300005467 Bacteria 3719
32 Ga0070707_100000278 3300005468 Bacteria 50450
33 Ga0070707_100013421 3300005468 Bacteria 7664
34 Ga0070698_100000203 3300005471 Bacteria 57165
35 Ga0070698_100128840 3300005471 Bacteria 2487
36 Ga0070699_100001034 3300005518 Bacteria 25839
37 Ga0070699_100025461 3300005518 Bacteria 5100
38 Ga0070699_100163430 3300005518 Bacteria 1971
39 Ga0070697_100004705 3300005536 Bacteria 10460
40 Ga0070697_100010820 3300005536 Bacteria 7125
41 Ga0070697_100011344 3300005536 Bacteria 6962
42 Ga0070697_100020303 3300005536 Bacteria 5254
43 Ga0070686_100814134 3300005544 Bacteria 754
44 Ga0070695_100119144 3300005545 Bacteria 1803
45 Ga0068854_100455788 3300005578 Bacteria 1069
46 Ga0068856_100003730 3300005614 Bacteria 15271
47 Ga0068866_10078732 3300005718 Bacteria 1764
48 Ga0068863_100048640 3300005841 Unclassified 4021
49 Ga0081540_1157106 3300005983 Bacteria 888
50 Ga0070717_10002031 3300006028 Bacteria 14168
51 Ga0070717_10083645 3300006028 Bacteria 2684
52 Ga0070717_10145076 3300006028 Bacteria 2050
53 Ga0070717_10506199 3300006028 Unclassified 1092
54 Ga0070717_10586786 3300006028 Bacteria 1011
55 Ga0070715_10010353 3300006163 Bacteria 3321
56 Ga0070716_100000492 3300006173 Bacteria 16423
57 Ga0070716_100050302 3300006173 Bacteria 2364
58 Ga0070716_100323401 3300006173 Bacteria 1082
59 Ga0070712_100001995 3300006175 Bacteria 12494
60 Ga0070712_100004983 3300006175 Bacteria 8217
61 Ga0070712_100023272 3300006175 Bacteria 4091
62 Ga0070712_100175264 3300006175 Bacteria 1667
63 Ga0097621_100027845 3300006237 Bacteria 4449
64 Ga0097621_100411374 3300006237 Bacteria 1212
65 Ga0068871_100013150 3300006358 Bacteria 6137
66 Ga0068871_100031711 3300006358 Bacteria 4170
67 Ga0068871_100413710 3300006358 Bacteria 1203
68 Ga0075434_100688307 3300006871 Unclassified 1040
69 Ga0068865_100078780 3300006881 Bacteria 2358
70 Ga0075436_100000459 3300006914 Bacteria 26338
71 Ga0099823_1059706 3300006944 Bacteria 2022
72 Ga0075435_100000506 3300007076 Bacteria 23788
73 Ga0105240_10037194 3300009093 Bacteria 6256
74 Ga0105240_10153360 3300009093 Unclassified 2742
75 Ga0105245_10000286 3300009098 Bacteria 48236
76 Ga0105245_10231274 3300009098 Bacteria 1788
77 Ga0105241_10111396 3300009174 Bacteria 2191
78 Ga0105241_10984549 3300009174 Bacteria 788
79 Ga0105242_10007645 3300009176 Bacteria 8319
80 Ga0105248_10294241 3300009177 Unclassified 1828
81 Ga0105248_11255767 3300009177 Unclassified 838
82 Ga0105237_10027698 3300009545 Bacteria 5779
83 Ga0105237_10136338 3300009545 Viruses 2449
84 Ga0105237_10267156 3300009545 Bacteria 1714
85 Ga0105239_10060437 3300010375 Unclassified 4159
86 Ga0105239_10918060 3300010375 Bacteria 1005
87 Ga0157319_1000006 3300012497 Bacteria 361506
88 Ga0157369_10223718 3300013105 Bacteria 1969
89 Ga0157369_10494525 3300013105 Bacteria 1265
90 Ga0157374_10014756 3300013296 Bacteria 6842
91 Ga0157374_10047547 3300013296 Unclassified 3978
92 Ga0157374_10285201 3300013296 Bacteria 1631
93 Ga0157378_10000023 3300013297 Bacteria 129977
94 Ga0157378_10039281 3300013297 Unclassified 4197
95 Ga0157378_10080013 3300013297 Bacteria 2951
96 Ga0163162_10021429 3300013306 Bacteria 6365
97 Ga0163162_10023877 3300013306 Bacteria 6034
98 Ga0157372_10031391 3300013307 Bacteria 5817
99 Ga0157375_10013298 3300013308 Bacteria 7319
100 Ga0157377_10440797 3300014745 Bacteria 897
101 Ga0157379_10065605 3300014968 Unclassified 3246
102 Ga0157376_10049351 3300014969 Bacteria 3485
103 Ga0157376_10074029 3300014969 Unclassified 2902
104 Ga0157376_10096498 3300014969 Bacteria 2573
105 Ga0157376_10132924 3300014969 Bacteria 2223
106 Ga0157376_10273706 3300014969 Bacteria 1587
107 Ga0157376_10343311 3300014969 Bacteria 1427
108 Ga0213876_10114591 3300021384 Bacteria 1431
109 Ga0224569_101733 3300022732 Bacteria 1807
110 Ga0228598_1000319 3300024227 Bacteria 9409
111 Ga0209258_103347 3300025242 Bacteria 3506
112 Ga0209673_1006357 3300025273 Bacteria 5718
113 Ga0209050_1006598 3300025298 Bacteria 6814
114 Ga0209256_1000873 3300025299 Bacteria 37313
115 Ga0209051_1002172 3300025303 Bacteria 14538
116 Ga0209257_1000747 3300025304 Bacteria 49140
117 Ga0209257_1001305 3300025304 Bacteria 30352
118 Ga0207692_10011530 3300025898 Bacteria 3766
119 Ga0207692_10067845 3300025898 Bacteria 1869
120 Ga0207685_10000460 3300025905 Bacteria 6829
121 Ga0207685_10060243 3300025905 Bacteria 1500
122 Ga0207699_10007804 3300025906 Bacteria 5244
123 Ga0207684_10003387 3300025910 Bacteria 15613
124 Ga0207684_10003840 3300025910 Bacteria 14465
125 Ga0207684_10044026 3300025910 Bacteria 3785
126 Ga0207707_10061696 3300025912 Bacteria 3262
127 Ga0207695_10248658 3300025913 Unclassified 1678
128 Ga0207693_10012918 3300025915 Bacteria 6739
129 Ga0207693_10015106 3300025915 Bacteria 6198
130 Ga0207693_10105115 3300025915 Bacteria 2214
131 Ga0207693_10630705 3300025915 Bacteria 833
132 Ga0207663_10001859 3300025916 Bacteria 9984
133 Ga0207663_10011127 3300025916 Bacteria 4818
134 Ga0207663_10154354 3300025916 Unclassified 1614
135 Ga0207646_10178429 3300025922 Bacteria 1918
136 Ga0207694_10166045 3300025924 Unclassified 1785
137 Ga0207687_10010868 3300025927 Bacteria 5948
138 Ga0207700_10000334 3300025928 Bacteria 27747
139 Ga0207700_10098551 3300025928 Unclassified 2325
140 Ga0207700_10328671 3300025928 Bacteria 1327
141 Ga0207700_10423521 3300025928 Bacteria 1170
142 Ga0207664_10319818 3300025929 Bacteria 1369
143 Ga0207664_10347164 3300025929 Unclassified 1313
144 Ga0207704_10148625 3300025938 Unclassified 1650
145 Ga0207665_10001360 3300025939 Bacteria 16473
146 Ga0207665_10005963 3300025939 Bacteria 8106
147 Ga0207665_10017266 3300025939 Bacteria 4741
148 Ga0207665_10017346 3300025939 Bacteria 4731
149 Ga0207665_10033512 3300025939 Bacteria 3405
150 Ga0207689_10265539 3300025942 Bacteria 1420
151 Ga0207661_10103187 3300025944 Bacteria 2400
152 Ga0207640_10485910 3300025981 Bacteria 1025
153 Ga0207677_10053003 3300026023 Bacteria 2759
154 Ga0207702_10028314 3300026078 Bacteria 4656
155 Ga0207641_10047976 3300026088 Unclassified 3604
156 Ga0209389_1080423 3300027296 Bacteria 1574
157 Ga0265356_1005217 3300028017 Bacteria 1558
158 Ga0265355_1004179 3300028036 Bacteria 1082
159 Ga0268265_10806402 3300028380 Bacteria 915
160 Ga0265762_1000940 3300030760 Bacteria 5215
161 Ga0265762_1004260 3300030760 Bacteria 2565
162 Ga0265760_10023883 3300031090 Bacteria 1778
163 Ga0265342_10020396 3300031712 Bacteria 4252
164 Ga0316576_10012544 3300031727 Bacteria 5602
165 Ga0316578_10063181 3300031728 Bacteria 2184
166 Ga0316580_10056867 3300032139 Bacteria 1202
167 Ga0373923_0095413 3300035111 Bacteria 1306
168 Ga0373936_0051313 3300035113 Bacteria 1669
169 Ga0373945_0039046 3300035116 Bacteria 1710
170 Ga0373943_0010107 3300035170 Bacteria 4233
171 Ga0373943_0054423 3300035170 Bacteria 1979
172 Ga0373946_0004947 3300035171 Bacteria 4798
173 Ga0373955_0208445 3300035172 Bacteria 1165
174 Ga0373924_0043368 3300035410 Bacteria 1847
175 Ga0373931_0268985 3300035691 Bacteria 1043
176 Ga0373935_0041117 3300035692 Bacteria 2903
177 Ga0373927_0262934 3300035695 Unclassified 1135
178 Ga0373937_0016169 3300036401 Bacteria 6619
179 Ga0373937_0508902 3300036401 Bacteria 1144
180 Ga0373925_0000270 3300037068 Bacteria 54195
181 Ga0373925_0051180 3300037068 Bacteria 3082
182 Ga0373925_0121110 3300037068 Bacteria 2031
183 Ga0395899_0051321 3300037312 Bacteria 3061
184 Ga0395900_0248645 3300037418 Bacteria 1780
185 Ga0395905_0845842 3300037471 Bacteria 818
186 Ga0436364_0594629 3300037853 Bacteria 1097
187 Ga0436365_0360940 3300039437 Bacteria 2838
188 Ga0436365_0871220 3300039437 Bacteria 927
189 Ga0436360_0179924 3300039438 Unclassified 1377
190 Ga0436362_1289488 3300039453 Bacteria 3408
191 Ga0451577_0040994 3300042876 Bacteria 4157
192 Ga0466959_0172687 3300045049 Bacteria 1516
193 Ga0451576_0099081 3300045051 Bacteria 3032
194 Ga0495603_0049566 3300046455 Bacteria 2500
195 Ga0495603_0207312 3300046455 Bacteria 1132
196 Ga0495629_0000391 3300046459 Bacteria 36806
197 Ga0495629_0046913 3300046459 Bacteria 3030
198 Ga0495580_0000098 3300046472 Bacteria 57956
199 Ga0495580_0003909 3300046472 Bacteria 12587
200 Ga0495580_0005442 3300046472 Bacteria 10520
201 Ga0495580_0017554 3300046472 Bacteria 5349
202 Ga0495580_0019742 3300046472 Bacteria 5003
203 Ga0495580_0061141 3300046472 Bacteria 2646
204 Ga0495580_0117058 3300046472 Bacteria 1851
205 Ga0495580_0278570 3300046472 Bacteria 1141
206 Ga0495580_0549154 3300046472 Unclassified 767
207 Ga0495582_0257587 3300046473 Bacteria 1001
208 Ga0495639_0000156 3300046475 Bacteria 35075
209 Ga0495594_0008444 3300046499 Bacteria 5308
210 Ga0495628_0139078 3300046516 Bacteria 1854
211 Ga0495630_0073547 3300046517 Unclassified 2574
212 Ga0495630_0229788 3300046517 Bacteria 1417
213 Ga0495666_0000057 3300046526 Bacteria 42678
214 Ga0495642_0162696 3300046528 Bacteria 968
215 Ga0495586_0000308 3300046535 Bacteria 30944
216 Ga0495622_0001685 3300046557 Bacteria 10931
217 Ga0495658_0010771 3300046683 Bacteria 4579
218 Ga0495669_0231291 3300046684 Bacteria 887
219 Ga0495613_0172809 3300046689 Bacteria 1533
220 Ga0495581_0038883 3300047315 Bacteria 2754
221 Ga0495674_0013659 3300047319 Bacteria 7630
222 Ga0495676_0019982 3300047321 Bacteria 5883
223 Ga0495593_0312408 3300047673 Unclassified 786
224 Ga0496100_0124798 3300048903 Bacteria 1806
225 Ga0496102_0004607 3300048905 Bacteria 11666
226 Ga0496104_0096735 3300048907 Unclassified 2825
227 Ga0496104_0353389 3300048907 Bacteria 1382
228 Ga0496105_0080298 3300048908 Bacteria 2694
229 Ga0496109_0142370 3300048912 Bacteria 2243
230 Ga0496112_0025220 3300048915 Bacteria 5707
231 Ga0496115_0085994 3300048918 Bacteria 2565
232 Ga0496115_0279211 3300048918 Bacteria 1371
233 Ga0501075_0277979 3300049591 Bacteria 1276
234 Ga0501077_0023367 3300049593 Bacteria 3920
235 Ga0501080_0103156 3300049742 Bacteria 2645
236 Ga0501080_0654441 3300049742 Bacteria 929
237 nmdc:mga0k408_109211_c1 3300050493 Bacteria 1634
238 nmdc:mga0n895_218290_c1 3300050512 Archaea 1936
239 nmdc:mga0n895_878017_c1 3300050512 Unclassified 883
240 Ga0495601_0051535 3300053077 Bacteria 2598
241 Ga0495612_0089165 3300053078 Bacteria 1303
242 Ga0495619_0224306 3300053085 Bacteria 1302
243 Ga0500616_0058128 3300053153 Bacteria 2013
244 Ga0501084_0000312 3300054114 Bacteria 36929
245 Ga0501076_0783560
246 LJNas_1000041
247 Ga0055524_1008190
248 Ga0055531_10005827
249 Ga0068869_100002204
250 Ga0068869_100246180
251 Ga0070666_10017042
252 Ga0068868_100014300
253 Ga0068868_100025396
254 Ga0070709_10024805
255 Ga0070709_10025278
256 Ga0070713_100028061
257 Ga0070713_100073143
258 Ga0070713_100225602
259 Ga0070713_100795506
260 Ga0070710_10007013
261 Ga0070710_10027255
262 Ga0070711_100015697
263 Ga0070711_100129307
264 Ga0070711_100131176
265 Ga0070708_100004519
266 Ga0070708_100053252
267 Ga0070708_100064420
268 Ga0070708_100404394
269 Ga0070681_10066174
270 Ga0070681_10535040
271 Ga0070706_100002374
272 Ga0070706_100003656
273 Ga0070706_100028654
274 Ga0070706_100034180
275 Ga0070706_100053713
276 Ga0070707_100000278
277 Ga0070707_100013421
278 Ga0070698_100000203
279 Ga0070698_100128840
280 Ga0070699_100001034
281 Ga0070699_100025461
282 Ga0070699_100163430
283 Ga0070697_100004705
284 Ga0070697_100010820
285 Ga0070697_100011344
286 Ga0070697_100020303
287 Ga0070686_100814134
288 Ga0070695_100119144
289 Ga0068854_100455788
290 Ga0068856_100003730
291 Ga0068866_10078732
292 Ga0068863_100048640
293 Ga0081540_1157106
294 Ga0070717_10002031
295 Ga0070717_10083645
296 Ga0070717_10145076
297 Ga0070717_10506199
298 Ga0070717_10586786
299 Ga0070715_10010353
300 Ga0070716_100000492
301 Ga0070716_100050302
302 Ga0070716_100323401
303 Ga0070712_100001995
304 Ga0070712_100004983
305 Ga0070712_100023272
306 Ga0070712_100175264
307 Ga0097621_100027845
308 Ga0097621_100411374
309 Ga0068871_100013150
310 Ga0068871_100031711
311 Ga0068871_100413710
312 Ga0075434_100688307
313 Ga0068865_100078780
314 Ga0075436_100000459
315 Ga0099823_1059706
316 Ga0075435_100000506
317 Ga0105240_10037194
318 Ga0105240_10153360
319 Ga0105245_10000286
320 Ga0105245_10231274
321 Ga0105241_10111396
322 Ga0105241_10984549
323 Ga0105242_10007645
324 Ga0105248_10294241
325 Ga0105248_11255767
326 Ga0105237_10027698
327 Ga0105237_10136338
328 Ga0105237_10267156
329 Ga0105239_10060437
330 Ga0105239_10918060
331 Ga0157319_1000006
332 Ga0157369_10223718
333 Ga0157369_10494525
334 Ga0157374_10014756
335 Ga0157374_10047547
336 Ga0157374_10285201
337 Ga0157378_10000023
338 Ga0157378_10039281
339 Ga0157378_10080013
340 Ga0163162_10021429
341 Ga0163162_10023877
342 Ga0157372_10031391
343 Ga0157375_10013298
344 Ga0157377_10440797
345 Ga0157379_10065605
346 Ga0157376_10049351
347 Ga0157376_10074029
348 Ga0157376_10096498
349 Ga0157376_10132924
350 Ga0157376_10273706
351 Ga0157376_10343311
352 Ga0213876_10114591
353 Ga0224569_101733
354 Ga0228598_1000319
355 Ga0209258_103347
356 Ga0209673_1006357
357 Ga0209050_1006598
358 Ga0209256_1000873
359 Ga0209051_1002172
360 Ga0209257_1000747
361 Ga0209257_1001305
362 Ga0207692_10011530
363 Ga0207692_10067845
364 Ga0207685_10000460
365 Ga0207685_10060243
366 Ga0207699_10007804
367 Ga0207684_10003387
368 Ga0207684_10003840
369 Ga0207684_10044026
370 Ga0207707_10061696
371 Ga0207695_10248658
372 Ga0207693_10012918
373 Ga0207693_10015106
374 Ga0207693_10105115
375 Ga0207693_10630705
376 Ga0207663_10001859
377 Ga0207663_10011127
378 Ga0207663_10154354
379 Ga0207646_10178429
380 Ga0207694_10166045
381 Ga0207687_10010868
382 Ga0207700_10000334
383 Ga0207700_10098551
384 Ga0207700_10328671
385 Ga0207700_10423521
386 Ga0207664_10319818
387 Ga0207664_10347164
388 Ga0207704_10148625
389 Ga0207665_10001360
390 Ga0207665_10005963
391 Ga0207665_10017266
392 Ga0207665_10017346
393 Ga0207665_10033512
394 Ga0207689_10265539
395 Ga0207661_10103187
396 Ga0207640_10485910
397 Ga0207677_10053003
398 Ga0207702_10028314
399 Ga0207641_10047976
400 Ga0209389_1080423
401 Ga0265356_1005217
402 Ga0265355_1004179
403 Ga0268265_10806402
404 Ga0265762_1000940
405 Ga0265762_1004260
406 Ga0265760_10023883
407 Ga0265342_10020396
408 Ga0316576_10012544
409 Ga0316578_10063181
410 Ga0316580_10056867
411 Ga0373923_0095413
412 Ga0373936_0051313
413 Ga0373945_0039046
414 Ga0373943_0010107
415 Ga0373943_0054423
416 Ga0373946_0004947
417 Ga0373955_0208445
418 Ga0373924_0043368
419 Ga0373931_0268985
420 Ga0373935_0041117
421 Ga0373927_0262934
422 Ga0373937_0016169
423 Ga0373937_0508902
424 Ga0373925_0000270
425 Ga0373925_0051180
426 Ga0373925_0121110
427 Ga0395899_0051321
428 Ga0395900_0248645
429 Ga0395905_0845842
430 Ga0436364_0594629
431 Ga0436365_0360940
432 Ga0436365_0871220
433 Ga0436360_0179924
434 Ga0436362_1289488
435 Ga0451577_0040994
436 Ga0466959_0172687
437 Ga0451576_0099081
438 Ga0495603_0049566
439 Ga0495603_0207312
440 Ga0495629_0000391
441 Ga0495629_0046913
442 Ga0495580_0000098
443 Ga0495580_0003909
444 Ga0495580_0005442
445 Ga0495580_0017554
446 Ga0495580_0019742
447 Ga0495580_0061141
448 Ga0495580_0117058
449 Ga0495580_0278570
450 Ga0495580_0549154
451 Ga0495582_0257587
452 Ga0495639_0000156
453 Ga0495594_0008444
454 Ga0495628_0139078
455 Ga0495630_0073547
456 Ga0495630_0229788
457 Ga0495666_0000057
458 Ga0495642_0162696
459 Ga0495586_0000308
460 Ga0495622_0001685
461 Ga0495658_0010771
462 Ga0495669_0231291
463 Ga0495613_0172809
464 Ga0495581_0038883
465 Ga0495674_0013659
466 Ga0495676_0019982
467 Ga0495593_0312408
468 Ga0496100_0124798
469 Ga0496102_0004607
470 Ga0496104_0096735
471 Ga0496104_0353389
472 Ga0496105_0080298
473 Ga0496109_0142370
474 Ga0496112_0025220
475 Ga0496115_0085994
476 Ga0496115_0279211
477 Ga0501075_0277979
478 Ga0501077_0023367
479 Ga0501080_0103156
480 Ga0501080_0654441
481 nmdc:mga0k408_109211_c1
482 nmdc:mga0n895_218290_c1
483 nmdc:mga0n895_878017_c1
484 Ga0495601_0051535
485 Ga0495612_0089165
486 Ga0495619_0224306
487 Ga0500616_0058128
488 Ga0501084_0000312

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01177

Asp_Glu_race

Asp/Glu/Hydantoin racemase

7

224

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
5elm-assembly2.cif.gz_D error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9228 3 217
5hqt-assembly1.cif.gz_A crystal structure of an aspartate/glutamate racemase from escherichia coli o157 0.9189 3 216
5elm-assembly2.cif.gz_D error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9107 3 217
3ojc-assembly1.cif.gz_A crystal structure of a putative asp/glu racemase from yersinia pestis 0.9054 3 215
5hqt-assembly1.cif.gz_A crystal structure of an aspartate/glutamate racemase from escherichia coli o157 0.9028 3 216
ID Description Score Start End Superfamily
af_P03813_2_229_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9414 4 211 3.40.50.720
af_P03813_2_104_3.40.50.1860 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9291 4 103 3.40.50.1860
af_P03813_2_229_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8998 4 211 3.40.50.720
af_P03813_105_213_3.40.50.1860 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8988 105 198 3.40.50.1860
af_P03813_2_104_3.40.50.1860 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8954 4 103 3.40.50.1860
ID Description Score Start End GO Terms
AF-A0A7V7WWD4-F1-model_v4 Aspartate/glutamate racemase family protein 0.9824 1 115 GO:0016855
AF-X1E7D8-F1-model_v4 Aspartate racemase 0.9665 1 125 GO:0036361
AF-A0A1M6P2G2-F1-model_v4 Aspartate racemase 0.9628 1 214 GO:0047661
AF-C5CUV6-F1-model_v4 Aspartate racemase 0.9613 1 214 GO:0047661
AF-A0A2V7W9L1-F1-model_v4 Aspartate racemase 0.9607 33 216 GO:0047661

Map