F356324

General Info

Members Datasets Scaffolds Average Seq Length
244 134 488 739

Family's Representative Sequence

Representative Sequence 3300005563|Ga0068855_100007858|Ga0068855_1000078586
Length 795
Sequence VANLNVLQTFRRRSEADSASAPTPNAAARVLVASSAMLTFISFWRVAAIVLNDMGSSAFYAGAISEHFIGKTAPWFVLAIMVLAGAVALLYIESCGMFVRGGVYRVVKEAMGSTLAKFSVSALMFDYILTGPISGVSAGLYLTGLLNELLQYAHSHILIPMNAGAAMVAILVTLYFWWENIKGIPESSEKALRIMYVTTIMVVLMVGWCIYTLVVRGAHLPPLPHLRNITFLTGDHGGALGWLSHSSLPRTVGFIGILIGLGHSVLAMSGEETMAQVYREIEHPKLPNLKKSALVIFLYSLVFTAGVAFFSVMIIPDSVRGSFQDNPIGGLAMYMVGPLPLRLVFRAFVVVVGVLMLAGAVNTAIVGSNGVLNRVSEDGILPEWFRRPHRRFGTSYRILNLVVLLQLFTILLSRGDIFVLGEAYAFGVMWSFSMKGLAVLVLRYKDPGKREYRVGLNFRIGKIEIPFGLAIITASLTALCAINLFTKQVATISGIAFTVIFFTIFEVSEFLTRKRASQHSELDQFNIVPGDDLTPESLDVRPGGVLVMVRNYDTLYNLTAALDRIDPRKQDVIALHLRFLGRASGGEYELAPEQLFSTEEQILFTRALSIAEKRGKSIHLAVAGATDKWEAILKSAQSLHAAEVVLCASPNRPAAEEARLAGLAWEYLQEPRPQLTLTICFPGGREYVSYLGPHAPHLTHNEVDLLHKIWLELSDDLAPEEIHHHDVVHFALEELQHLLTTPHSPEVEQRLREHLSRIRQHRHGDTQLPMELIPVTSLLDLPPTEPSAREPAGKY

Samples

Sample ID Description Type Environment
1 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
43 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
51 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
78 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
79 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
80 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
81 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
82 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
83 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
84 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
85 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
86 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
87 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
88 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
89 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
90 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
91 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
92 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
93 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
94 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
95 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
96 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
97 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
98 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
99 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
100 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
101 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
102 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
103 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
104 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
105 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
106 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
107 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
108 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
109 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
110 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
111 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
112 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
113 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
114 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
115 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
116 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
117 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
118 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
119 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
120 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
121 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
122 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
123 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
124 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
125 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
126 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
127 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
128 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
129 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
130 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
131 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
132 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
133 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
134 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.41
Rhizosphere 99.59
Stem 0
Stem Tuber 0
Unclassified 10.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068855_100007858 3300005563 Bacteria 12887
2 Ga0065712_10068959 3300005290 Bacteria 8460
3 Ga0070658_10008955 3300005327 Bacteria 8044
4 Ga0070683_100019458 3300005329 Bacteria 6031
5 Ga0068868_100005515 3300005338 Bacteria 8898
6 Ga0070714_100049894 3300005435 Bacteria 3563
7 Ga0070713_100008200 3300005436 Bacteria 7400
8 Ga0070713_100008322 3300005436 Bacteria 7354
9 Ga0070713_100019153 3300005436 Bacteria 5217
10 Ga0070713_100071893 3300005436 Unclassified 2925
11 Ga0070711_100001322 3300005439 Bacteria 13510
12 Ga0070708_100002134 3300005445 Bacteria 15284
13 Ga0070708_100019670 3300005445 Bacteria 5679
14 Ga0070681_10000105 3300005458 Bacteria 62694
15 Ga0070681_10051254 3300005458 Unclassified 4117
16 Ga0070706_100020491 3300005467 Bacteria 6093
17 Ga0070707_100000122 3300005468 Bacteria 72981
18 Ga0070699_100002384 3300005518 Bacteria 16852
19 Ga0070679_100017236 3300005530 Bacteria 6987
20 Ga0070684_100033775 3300005535 Unclassified 4371
21 Ga0070697_100041014 3300005536 Bacteria 3745
22 Ga0068853_100032148 3300005539 Unclassified 4443
23 Ga0068855_100000143 3300005563 Bacteria 91719
24 Ga0068855_100001962 3300005563 Bacteria 25558
25 Ga0068855_100013160 3300005563 Bacteria 9979
26 Ga0068855_100039252 3300005563 Bacteria 5620
27 Ga0070664_100002276 3300005564 Bacteria 15447
28 Ga0068857_100000036 3300005577 Bacteria 72327
29 Ga0068857_100001375 3300005577 Bacteria 19189
30 Ga0068854_100002502 3300005578 Bacteria 11400
31 Ga0068856_100000241 3300005614 Bacteria 59474
32 Ga0068856_100000666 3300005614 Bacteria 37244
33 Ga0068856_100004863 3300005614 Bacteria 13305
34 Ga0068856_100111643 3300005614 Bacteria 2731
35 Ga0068852_100009053 3300005616 Bacteria 7371
36 Ga0068859_100000707 3300005617 Bacteria 33542
37 Ga0068864_100003140 3300005618 Bacteria 13649
38 Ga0068858_100000678 3300005842 Bacteria 35515
39 Ga0068858_100003608 3300005842 Bacteria 15311
40 Ga0068858_100015288 3300005842 Bacteria 7222
41 Ga0068860_100007217 3300005843 Bacteria 11109
42 Ga0068860_100044177 3300005843 Unclassified 4248
43 Ga0070717_10000295 3300006028 Bacteria 33556
44 Ga0070717_10002738 3300006028 Bacteria 12452
45 Ga0070717_10003284 3300006028 Bacteria 11573
46 Ga0070717_10008289 3300006028 Bacteria 7758
47 Ga0070717_10017643 3300006028 Bacteria 5557
48 Ga0070717_10018714 3300006028 Bacteria 5416
49 Ga0070717_10026397 3300006028 Unclassified 4632
50 Ga0070717_10039817 3300006028 Bacteria 3825
51 Ga0070717_10055582 3300006028 Bacteria 3267
52 Ga0070712_100002158 3300006175 Bacteria 12108
53 Ga0070712_100002755 3300006175 Bacteria 10862
54 Ga0097621_100000055 3300006237 Bacteria 59474
55 Ga0097621_100000171 3300006237 Bacteria 40994
56 Ga0097621_100007044 3300006237 Bacteria 8009
57 Ga0068871_100000898 3300006358 Bacteria 19832
58 Ga0068871_100007599 3300006358 Bacteria 7750
59 Ga0075434_100013140 3300006871 Bacteria 7865
60 Ga0075434_100028485 3300006871 Bacteria 5488
61 Ga0075434_100029856 3300006871 Bacteria 5366
62 Ga0075434_100081428 3300006871 Bacteria 3235
63 Ga0097620_100000707 3300006931 Bacteria 33542
64 Ga0105240_10001411 3300009093 Bacteria 41214
65 Ga0105240_10012503 3300009093 Bacteria 11713
66 Ga0105240_10017943 3300009093 Bacteria 9518
67 Ga0105240_10034136 3300009093 Bacteria 6565
68 Ga0105240_10095280 3300009093 Bacteria 3629
69 Ga0105245_10031203 3300009098 Bacteria 4716
70 Ga0114129_10002966 3300009147 Bacteria 23747
71 Ga0114129_10018751 3300009147 Bacteria 9855
72 Ga0114129_10056929 3300009147 Bacteria 5473
73 Ga0105241_10001564 3300009174 Bacteria 17507
74 Ga0105242_10040358 3300009176 Bacteria 3762
75 Ga0105248_10043089 3300009177 Bacteria 5061
76 Ga0105237_10022201 3300009545 Bacteria 6512
77 Ga0105237_10072133 3300009545 Unclassified 3447
78 Ga0105238_10002152 3300009551 Bacteria 19923
79 Ga0105239_10072491 3300010375 Unclassified 3786
80 Ga0157373_10001695 3300013100 Bacteria 16810
81 Ga0157373_10064250 3300013100 Unclassified 2598
82 Ga0157370_10010797 3300013104 Bacteria 9600
83 Ga0157369_10000187 3300013105 Bacteria 85960
84 Ga0157369_10017664 3300013105 Bacteria 8014
85 Ga0157369_10026450 3300013105 Bacteria 6434
86 Ga0157369_10047648 3300013105 Unclassified 4652
87 Ga0157369_10153348 3300013105 Bacteria 2435
88 Ga0157374_10000674 3300013296 Bacteria 30061
89 Ga0157374_10003180 3300013296 Bacteria 13792
90 Ga0157374_10003353 3300013296 Bacteria 13447
91 Ga0157374_10009641 3300013296 Bacteria 8294
92 Ga0157378_10000020 3300013297 Bacteria 131245
93 Ga0157378_10000072 3300013297 Bacteria 91281
94 Ga0157378_10003689 3300013297 Bacteria 13577
95 Ga0157378_10032014 3300013297 Unclassified 4645
96 Ga0163162_10087451 3300013306 Unclassified 3195
97 Ga0157372_10000083 3300013307 Bacteria 99009
98 Ga0157372_10000877 3300013307 Bacteria 32693
99 Ga0157372_10001005 3300013307 Bacteria 30808
100 Ga0157372_10001859 3300013307 Bacteria 22893
101 Ga0157372_10004705 3300013307 Bacteria 14496
102 Ga0157372_10004915 3300013307 Bacteria 14209
103 Ga0157372_10039768 3300013307 Bacteria 5191
104 Ga0157376_10098179 3300014969 Bacteria 2553
105 Ga0228598_1001538 3300024227 Bacteria 5052
106 Ga0207647_10011380 3300025904 Bacteria 6240
107 Ga0207705_10013930 3300025909 Bacteria 5798
108 Ga0207684_10059698 3300025910 Bacteria 3239
109 Ga0207707_10002675 3300025912 Bacteria 15921
110 Ga0207707_10095798 3300025912 Bacteria 2594
111 Ga0207695_10000532 3300025913 Bacteria 79697
112 Ga0207695_10020269 3300025913 Bacteria 7621
113 Ga0207695_10042382 3300025913 Unclassified 4862
114 Ga0207693_10001035 3300025915 Bacteria 24894
115 Ga0207663_10008207 3300025916 Bacteria 5448
116 Ga0207663_10028191 3300025916 Bacteria 3284
117 Ga0207646_10000246 3300025922 Bacteria 74117
118 Ga0207646_10095609 3300025922 Bacteria 2662
119 Ga0207694_10001611 3300025924 Bacteria 19038
120 Ga0207700_10007531 3300025928 Bacteria 6661
121 Ga0207700_10057222 3300025928 Unclassified 2939
122 Ga0207700_10069994 3300025928 Unclassified 2695
123 Ga0207664_10003052 3300025929 Bacteria 11134
124 Ga0207664_10040309 3300025929 Bacteria 3631
125 Ga0207706_10037378 3300025933 Bacteria 4312
126 Ga0207711_10013082 3300025941 Bacteria 6894
127 Ga0207711_10032839 3300025941 Bacteria 4390
128 Ga0207689_10001035 3300025942 Bacteria 26688
129 Ga0207661_10007808 3300025944 Bacteria 7621
130 Ga0207679_10000886 3300025945 Bacteria 19082
131 Ga0207667_10000591 3300025949 Bacteria 47010
132 Ga0207667_10001808 3300025949 Bacteria 26932
133 Ga0207667_10008658 3300025949 Bacteria 12067
134 Ga0207667_10026355 3300025949 Bacteria 6353
135 Ga0207677_10004302 3300026023 Bacteria 7626
136 Ga0207677_10040895 3300026023 Bacteria 3061
137 Ga0207703_10003341 3300026035 Bacteria 13475
138 Ga0207703_10003637 3300026035 Bacteria 12857
139 Ga0207639_10025980 3300026041 Unclassified 4251
140 Ga0207702_10000152 3300026078 Bacteria 81294
141 Ga0207702_10010819 3300026078 Bacteria 7611
142 Ga0207702_10013340 3300026078 Bacteria 6834
143 Ga0207641_10023247 3300026088 Bacteria 5108
144 Ga0207676_10004679 3300026095 Bacteria 9694
145 Ga0207676_10036509 3300026095 Unclassified 3739
146 Ga0207674_10002759 3300026116 Bacteria 21903
147 Ga0207674_10010204 3300026116 Bacteria 10667
148 Ga0207674_10067100 3300026116 Bacteria 3612
149 Ga0207698_10088248 3300026142 Unclassified 2529
150 Ga0268264_10031546 3300028381 Unclassified 4343
151 Ga0265319_1001610 3300028563 Bacteria 13160
152 Ga0265318_10000246 3300028577 Bacteria 47255
153 Ga0265318_10001625 3300028577 Bacteria 12978
154 Ga0265338_10018578 3300028800 Bacteria 7431
155 Ga0265320_10000466 3300031240 Bacteria 31706
156 Ga0265320_10013336 3300031240 Bacteria 4731
157 Ga0265325_10001695 3300031241 Bacteria 15304
158 Ga0265325_10002348 3300031241 Bacteria 12809
159 Ga0265329_10000475 3300031242 Bacteria 20908
160 Ga0265331_10000266 3300031250 Bacteria 58865
161 Ga0265331_10001821 3300031250 Bacteria 15105
162 Ga0265316_10004376 3300031344 Bacteria 14087
163 Ga0265316_10009195 3300031344 Bacteria 9101
164 Ga0265316_10011150 3300031344 Bacteria 8134
165 Ga0265314_10004384 3300031711 Bacteria 13130
166 Ga0265342_10000322 3300031712 Bacteria 53898
167 Ga0373923_0003766 3300035111 Bacteria 4921
168 Ga0373935_0001724 3300035692 Bacteria 12246
169 Ga0373927_0001856 3300035695 Bacteria 15658
170 Ga0373933_0000129 3300035724 Bacteria 47946
171 Ga0373933_0049898 3300035724 Unclassified 2496
172 Ga0373947_0004902 3300035725 Bacteria 7833
173 Ga0373937_0000015 3300036401 Bacteria 148228
174 Ga0373937_0021553 3300036401 Bacteria 5782
175 Ga0373925_0105263 3300037068 Unclassified 2174
176 Ga0436362_0848211 3300039453 Bacteria 15307
177 Ga0451577_0000760 3300042876 Bacteria 49191
178 Ga0453683_0007315 3300044673 Bacteria 7508
179 Ga0453684_0000104 3300044712 Bacteria 365431
180 Ga0495592_0009943 3300046454 Bacteria 7164
181 Ga0495651_0000269 3300046462 Bacteria 40351
182 Ga0495651_0005060 3300046462 Bacteria 10063
183 Ga0495653_0000689 3300046463 Bacteria 25814
184 Ga0495653_0002979 3300046463 Bacteria 13564
185 Ga0495580_0001097 3300046472 Bacteria 23738
186 Ga0495580_0005195 3300046472 Bacteria 10818
187 Ga0495580_0006329 3300046472 Bacteria 9662
188 Ga0495582_0064465 3300046473 Bacteria 2023
189 Ga0495664_0008044 3300046477 Bacteria 5871
190 Ga0495608_0004438 3300046511 Bacteria 10045
191 Ga0495608_0099747 3300046511 Bacteria 1873
192 Ga0495628_0004733 3300046516 Bacteria 12002
193 Ga0495628_0025404 3300046516 Unclassified 4839
194 Ga0495628_0069813 3300046516 Bacteria 2740
195 Ga0495630_0011787 3300046517 Bacteria 6336
196 Ga0495652_0002730 3300046529 Bacteria 17880
197 Ga0495665_0001492 3300046531 Bacteria 12540
198 Ga0495586_0002699 3300046535 Bacteria 9598
199 Ga0495587_0000219 3300046536 Bacteria 42459
200 Ga0495587_0000313 3300046536 Bacteria 34462
201 Ga0495587_0025143 3300046536 Bacteria 3641
202 Ga0495645_0035594 3300046543 Bacteria 3629
203 Ga0495667_0000598 3300046559 Bacteria 22976
204 Ga0495667_0002420 3300046559 Bacteria 12460
205 Ga0495667_0014847 3300046559 Bacteria 5262
206 Ga0495667_0023049 3300046559 Bacteria 4195
207 Ga0495634_0066430 3300046642 Bacteria 2388
208 Ga0495635_0028240 3300046663 Bacteria 3899
209 Ga0495657_0002169 3300046675 Bacteria 16646
210 Ga0495657_0017219 3300046675 Bacteria 5249
211 Ga0495657_0020513 3300046675 Unclassified 4750
212 Ga0495599_0001424 3300046678 Bacteria 13692
213 Ga0495623_0002356 3300046679 Bacteria 12571
214 Ga0495646_0041149 3300046680 Bacteria 2841
215 Ga0495613_0003355 3300046689 Bacteria 11968
216 Ga0495613_0005356 3300046689 Bacteria 9637
217 Ga0495613_0007562 3300046689 Bacteria 8084
218 Ga0495624_0004295 3300046690 Bacteria 10466
219 Ga0495600_0019383 3300046809 Unclassified 4345
220 Ga0495604_0001935 3300047317 Bacteria 16759
221 Ga0495604_0017560 3300047317 Bacteria 5729
222 Ga0495674_0027073 3300047319 Bacteria 5243
223 Ga0495680_0000041 3300047322 Bacteria 99386
224 Ga0495680_0008627 3300047322 Bacteria 9253
225 Ga0495680_0038826 3300047322 Bacteria 3802
226 Ga0495675_0002783 3300047444 Bacteria 10486
227 Ga0495675_0005927 3300047444 Bacteria 7468
228 Ga0495675_0007235 3300047444 Bacteria 6835
229 Ga0495675_0048376 3300047444 Bacteria 2705
230 Ga0495684_0000521 3300047471 Bacteria 31227
231 Ga0495684_0001787 3300047471 Bacteria 17259
232 Ga0495684_0005181 3300047471 Bacteria 10160
233 Ga0495593_0001139 3300047673 Bacteria 15479
234 Ga0495602_0000206 3300048088 Bacteria 54913
235 Ga0495602_0008070 3300048088 Bacteria 11003
236 Ga0495614_0001812 3300048089 Bacteria 9358
237 Ga0496104_0020846 3300048907 Bacteria 6011
238 nmdc:mga05p37_113684_c1 3300050507 Bacteria 3328
239 nmdc:mga05p37_16876_c2 3300050507 Bacteria 6866
240 nmdc:mga05p37_23444_c1 3300050507 Bacteria 7488
241 nmdc:mga0n895_127513_c1 3300050512 Bacteria 2568
242 nmdc:mga0n895_22058_c1 3300050512 Bacteria 5966
243 nmdc:mga08x19_33650_c1 3300050514 Unclassified 3235
244 Ga0495612_0001319 3300053078 Bacteria 10233
245 Ga0068855_100007858
246 Ga0065712_10068959
247 Ga0070658_10008955
248 Ga0070683_100019458
249 Ga0068868_100005515
250 Ga0070714_100049894
251 Ga0070713_100008200
252 Ga0070713_100008322
253 Ga0070713_100019153
254 Ga0070713_100071893
255 Ga0070711_100001322
256 Ga0070708_100002134
257 Ga0070708_100019670
258 Ga0070681_10000105
259 Ga0070681_10051254
260 Ga0070706_100020491
261 Ga0070707_100000122
262 Ga0070699_100002384
263 Ga0070679_100017236
264 Ga0070684_100033775
265 Ga0070697_100041014
266 Ga0068853_100032148
267 Ga0068855_100000143
268 Ga0068855_100001962
269 Ga0068855_100013160
270 Ga0068855_100039252
271 Ga0070664_100002276
272 Ga0068857_100000036
273 Ga0068857_100001375
274 Ga0068854_100002502
275 Ga0068856_100000241
276 Ga0068856_100000666
277 Ga0068856_100004863
278 Ga0068856_100111643
279 Ga0068852_100009053
280 Ga0068859_100000707
281 Ga0068864_100003140
282 Ga0068858_100000678
283 Ga0068858_100003608
284 Ga0068858_100015288
285 Ga0068860_100007217
286 Ga0068860_100044177
287 Ga0070717_10000295
288 Ga0070717_10002738
289 Ga0070717_10003284
290 Ga0070717_10008289
291 Ga0070717_10017643
292 Ga0070717_10018714
293 Ga0070717_10026397
294 Ga0070717_10039817
295 Ga0070717_10055582
296 Ga0070712_100002158
297 Ga0070712_100002755
298 Ga0097621_100000055
299 Ga0097621_100000171
300 Ga0097621_100007044
301 Ga0068871_100000898
302 Ga0068871_100007599
303 Ga0075434_100013140
304 Ga0075434_100028485
305 Ga0075434_100029856
306 Ga0075434_100081428
307 Ga0097620_100000707
308 Ga0105240_10001411
309 Ga0105240_10012503
310 Ga0105240_10017943
311 Ga0105240_10034136
312 Ga0105240_10095280
313 Ga0105245_10031203
314 Ga0114129_10002966
315 Ga0114129_10018751
316 Ga0114129_10056929
317 Ga0105241_10001564
318 Ga0105242_10040358
319 Ga0105248_10043089
320 Ga0105237_10022201
321 Ga0105237_10072133
322 Ga0105238_10002152
323 Ga0105239_10072491
324 Ga0157373_10001695
325 Ga0157373_10064250
326 Ga0157370_10010797
327 Ga0157369_10000187
328 Ga0157369_10017664
329 Ga0157369_10026450
330 Ga0157369_10047648
331 Ga0157369_10153348
332 Ga0157374_10000674
333 Ga0157374_10003180
334 Ga0157374_10003353
335 Ga0157374_10009641
336 Ga0157378_10000020
337 Ga0157378_10000072
338 Ga0157378_10003689
339 Ga0157378_10032014
340 Ga0163162_10087451
341 Ga0157372_10000083
342 Ga0157372_10000877
343 Ga0157372_10001005
344 Ga0157372_10001859
345 Ga0157372_10004705
346 Ga0157372_10004915
347 Ga0157372_10039768
348 Ga0157376_10098179
349 Ga0228598_1001538
350 Ga0207647_10011380
351 Ga0207705_10013930
352 Ga0207684_10059698
353 Ga0207707_10002675
354 Ga0207707_10095798
355 Ga0207695_10000532
356 Ga0207695_10020269
357 Ga0207695_10042382
358 Ga0207693_10001035
359 Ga0207663_10008207
360 Ga0207663_10028191
361 Ga0207646_10000246
362 Ga0207646_10095609
363 Ga0207694_10001611
364 Ga0207700_10007531
365 Ga0207700_10057222
366 Ga0207700_10069994
367 Ga0207664_10003052
368 Ga0207664_10040309
369 Ga0207706_10037378
370 Ga0207711_10013082
371 Ga0207711_10032839
372 Ga0207689_10001035
373 Ga0207661_10007808
374 Ga0207679_10000886
375 Ga0207667_10000591
376 Ga0207667_10001808
377 Ga0207667_10008658
378 Ga0207667_10026355
379 Ga0207677_10004302
380 Ga0207677_10040895
381 Ga0207703_10003341
382 Ga0207703_10003637
383 Ga0207639_10025980
384 Ga0207702_10000152
385 Ga0207702_10010819
386 Ga0207702_10013340
387 Ga0207641_10023247
388 Ga0207676_10004679
389 Ga0207676_10036509
390 Ga0207674_10002759
391 Ga0207674_10010204
392 Ga0207674_10067100
393 Ga0207698_10088248
394 Ga0268264_10031546
395 Ga0265319_1001610
396 Ga0265318_10000246
397 Ga0265318_10001625
398 Ga0265338_10018578
399 Ga0265320_10000466
400 Ga0265320_10013336
401 Ga0265325_10001695
402 Ga0265325_10002348
403 Ga0265329_10000475
404 Ga0265331_10000266
405 Ga0265331_10001821
406 Ga0265316_10004376
407 Ga0265316_10009195
408 Ga0265316_10011150
409 Ga0265314_10004384
410 Ga0265342_10000322
411 Ga0373923_0003766
412 Ga0373935_0001724
413 Ga0373927_0001856
414 Ga0373933_0000129
415 Ga0373933_0049898
416 Ga0373947_0004902
417 Ga0373937_0000015
418 Ga0373937_0021553
419 Ga0373925_0105263
420 Ga0436362_0848211
421 Ga0451577_0000760
422 Ga0453683_0007315
423 Ga0453684_0000104
424 Ga0495592_0009943
425 Ga0495651_0000269
426 Ga0495651_0005060
427 Ga0495653_0000689
428 Ga0495653_0002979
429 Ga0495580_0001097
430 Ga0495580_0005195
431 Ga0495580_0006329
432 Ga0495582_0064465
433 Ga0495664_0008044
434 Ga0495608_0004438
435 Ga0495608_0099747
436 Ga0495628_0004733
437 Ga0495628_0025404
438 Ga0495628_0069813
439 Ga0495630_0011787
440 Ga0495652_0002730
441 Ga0495665_0001492
442 Ga0495586_0002699
443 Ga0495587_0000219
444 Ga0495587_0000313
445 Ga0495587_0025143
446 Ga0495645_0035594
447 Ga0495667_0000598
448 Ga0495667_0002420
449 Ga0495667_0014847
450 Ga0495667_0023049
451 Ga0495634_0066430
452 Ga0495635_0028240
453 Ga0495657_0002169
454 Ga0495657_0017219
455 Ga0495657_0020513
456 Ga0495599_0001424
457 Ga0495623_0002356
458 Ga0495646_0041149
459 Ga0495613_0003355
460 Ga0495613_0005356
461 Ga0495613_0007562
462 Ga0495624_0004295
463 Ga0495600_0019383
464 Ga0495604_0001935
465 Ga0495604_0017560
466 Ga0495674_0027073
467 Ga0495680_0000041
468 Ga0495680_0008627
469 Ga0495680_0038826
470 Ga0495675_0002783
471 Ga0495675_0005927
472 Ga0495675_0007235
473 Ga0495675_0048376
474 Ga0495684_0000521
475 Ga0495684_0001787
476 Ga0495684_0005181
477 Ga0495593_0001139
478 Ga0495602_0000206
479 Ga0495602_0008070
480 Ga0495614_0001812
481 Ga0496104_0020846
482 nmdc:mga05p37_113684_c1
483 nmdc:mga05p37_16876_c2
484 nmdc:mga05p37_23444_c1
485 nmdc:mga0n895_127513_c1
486 nmdc:mga0n895_22058_c1
487 nmdc:mga08x19_33650_c1
488 Ga0495612_0001319

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13520

AA_permease_2

Amino acid permease

41

520

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3gi8-assembly1.cif.gz_C crystal structure of apct k158a transporter bound to 7f11 monoclonal fab fragment 0.8458 15 480
3gia-assembly1.cif.gz_A crystal structure of apct transporter 0.8383 15 480
3gi9-assembly1.cif.gz_C crystal structure of apct transporter bound to 7f11 monoclonal fab fragment 0.819 15 480
5oqt-assembly1.cif.gz_A crystal structure of a bacterial cationic amino acid transporter (cat) homologue 0.8143 17 478
6f34-assembly1.cif.gz_A crystal structure of a bacterial cationic amino acid transporter (cat) homologue bound to arginine. 0.8115 17 475
ID Description Score Start End Superfamily
af_Q4DQR3_170_606_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8506 16 489 1.20.1740.10
af_P71892_30_474_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.843 13 479 1.20.1740.10
af_Q86I87_92_535_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8424 16 485 1.20.1740.10
3giaA00 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8383 15 480 1.20.1740.10
af_Q9Y1A7_38_480_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8378 17 488 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A2G9SSZ9-F1-model_v4 APC family permease 0.9322 1 392 GO:0016020
GO:0022857
AF-A0A534Y9S5-F1-model_v4 APC family permease 0.8758 16 487 GO:0005886
GO:0022857
AF-A0A7J2VWD7-F1-model_v4 Amino acid permease 0.8666 15 478 GO:0005886
GO:0022857
AF-A0A2V8JFY2-F1-model_v4 Uncharacterized protein 0.8634 531 735
AF-A0A2V9JLL5-F1-model_v4 APC family permease 0.8625 164 521 GO:0005886
GO:0022857

Map