F356144

General Info

Members Datasets Scaffolds Average Seq Length
244 178 488 285

Family's Representative Sequence

Representative Sequence 3300003323|rootH1_10053291|rootH1_100532913
Length 281
Sequence MAGPYEIKGTLLPITDKVGIRYEKTGSGPPLVLLHTIRTQLEYFRSLAPILAESYTVYAIDLPGHGHSPIDPQAPFDEPYLRQGVISFIETLDLTVTLVGESIGGALALTVAATVPQRIERVFAINPYDYETRFGDGIRRGNGFANLIIGSVQIPLVGPVIAALENKAVLRGIMSGGFHDAAKFPVDLLDEYVRVSHRPRYRRAARKVLAGWRSWSKARDHYGAISAPVTLIYGDSDWSHPDERERTLATIPDARRFTLKDTGHFSAVENPSGLARILLEG

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
35 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
36 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
37 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
38 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
39 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
40 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
59 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
61 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
82 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
87 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
88 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
89 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
90 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
91 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
92 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
93 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
94 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
95 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
96 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
97 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
98 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
99 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
100 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
101 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
102 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
103 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
104 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
105 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
106 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
107 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
108 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
109 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
110 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
111 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
112 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
116 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
117 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
118 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
119 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
120 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
121 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
122 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
123 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
124 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
125 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
126 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
127 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
128 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
129 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
130 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
131 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
132 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
133 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
134 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
135 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
136 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
137 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
138 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
139 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
140 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
141 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
142 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
143 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
144 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
145 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
146 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
147 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
148 2524023205 Bradyrhizobium sp. Cp5.3 Isolate Nodule
149 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
150 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
151 2824671348 Bradyrhizobium sp. HAMBI 2125 Isolate Unclassified
152 2824687955 Bradyrhizobium sp. HAMBI 2126 Isolate Unclassified
153 2824696289 Bradyrhizobium sp. HAMBI 2127 Isolate Unclassified
154 2824773399 Bradyrhizobium sp. HAMBI 2130 Isolate Unclassified
155 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
156 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
157 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
158 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
159 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
160 2847939898 Bradyrhizobium ottawaense OO99 Isolate Unclassified
161 2874612657 Bradyrhizobium forestalis INPA54B Isolate Nodule
162 2906643746 Bradyrhizobium genosp. SA-3 Rp7b Isolate Unclassified
163 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
164 2924733363 Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1 Isolate Nodule
165 2924762789 Mesorhizobium sp. WSM4303 Isolate Unclassified
166 2935694250 Bradyrhizobium sp. LA6.1 Isolate Nodule
167 2935777560 Bradyrhizobium sp. LB14.3 Isolate Nodule
168 2937848649 Mesorhizobium sp. WSM4310 Isolate Unclassified
169 2977922695 Mesorhizobium sp. WSM4305 Isolate Unclassified
170 2987666974 Mesorhizobium sp. WSM4306 Isolate Unclassified
171 3000135777 Unclassified bacterium M00.F.Ca.ET.205.01.1.1 Isolate Unclassified
172 3004211236 Mesorhizobium sp. WSM4307 Isolate Unclassified
173 3004218560 Mesorhizobium sp. WSM4315 Isolate Unclassified
174 8006964411 Bradyrhizobium sp. sBnM-33 Isolate Nodule
175 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
176 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
177 8019538911 Bradyrhizobium sp. LB9.1b Isolate Nodule
178 8019648815 Bradyrhizobium sp. GM24.11 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 85.66
Metatranscriptomes 0
Isolates 14.34

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.75
Nodule 9.02
Rhizoplane 2.46
Rhizosphere 61.07
Stem 0
Stem Tuber 0
Unclassified 2.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10053291 3300003323 Bacteria 4899
2 rootH2_10091510 3300003320 Bacteria 1881
3 rootH2_10092601 3300003320 Bacteria 1695
4 rootH2_10111212 3300003320 Bacteria 4991
5 rootH2_10211094 3300003320 Bacteria 1599
6 rootL2_10129236 3300003322 Bacteria 1553
7 rootH1_10074586 3300003323 Bacteria 3527
8 rootH1_10155304 3300003323 Unclassified 2121
9 JGI25160J50197_1000263 3300003354 Bacteria 39637
10 Ga0055539_1008220 3300003752 Bacteria 1309
11 Ga0070676_10392548 3300005328 Bacteria 964
12 Ga0070670_100022698 3300005331 Bacteria 5400
13 Ga0070666_10249891 3300005335 Bacteria 1255
14 Ga0068868_100003888 3300005338 Bacteria 10437
15 Ga0068868_100110343 3300005338 Bacteria 2235
16 Ga0070671_100002074 3300005355 Bacteria 15433
17 Ga0070688_100158981 3300005365 Bacteria 1551
18 Ga0070659_100092875 3300005366 Bacteria 2421
19 Ga0070667_100012853 3300005367 Bacteria 6917
20 Ga0070667_100230945 3300005367 Bacteria 1649
21 Ga0070694_100121674 3300005444 Bacteria 1873
22 Ga0070663_100109929 3300005455 Bacteria 2070
23 Ga0070678_100290140 3300005456 Bacteria 1386
24 Ga0070662_100109604 3300005457 Bacteria 2101
25 Ga0070681_10319077 3300005458 Bacteria 1463
26 Ga0070699_100168122 3300005518 Bacteria 1943
27 Ga0070686_100061930 3300005544 Bacteria 2419
28 Ga0070704_100122476 3300005549 Bacteria 2001
29 Ga0068855_100248518 3300005563 Bacteria 1984
30 Ga0068852_100136544 3300005616 Bacteria 2265
31 Ga0068859_100005465 3300005617 Bacteria 12929
32 Ga0068859_100007008 3300005617 Bacteria 11447
33 Ga0068859_100098718 3300005617 Bacteria 2974
34 Ga0068864_100003905 3300005618 Bacteria 12275
35 Ga0068861_100000342 3300005719 Bacteria 26513
36 Ga0068861_100036400 3300005719 Bacteria 3652
37 Ga0068863_100006320 3300005841 Bacteria 11622
38 Ga0068863_100058295 3300005841 Bacteria 3654
39 Ga0068858_100008967 3300005842 Bacteria 9580
40 Ga0068858_100314038 3300005842 Bacteria 1497
41 Ga0068862_100015773 3300005844 Bacteria 6278
42 Ga0081455_10007929 3300005937 Bacteria 11110
43 Ga0081455_10016006 3300005937 Bacteria 7257
44 Ga0081455_10048034 3300005937 Bacteria 3691
45 Ga0081540_1002682 3300005983 Bacteria 14479
46 Ga0081540_1005591 3300005983 Bacteria 9357
47 Ga0081540_1020063 3300005983 Bacteria 4035
48 Ga0081539_10000155 3300005985 Bacteria 159271
49 Ga0075365_10010445 3300006038 Bacteria 5410
50 Ga0075368_10113890 3300006042 Bacteria 1116
51 Ga0075364_10050524 3300006051 Bacteria 2714
52 Ga0075362_10031230 3300006177 Bacteria 2304
53 Ga0075367_10208870 3300006178 Bacteria 1220
54 Ga0075369_10000537 3300006186 Bacteria 12003
55 Ga0075369_10050479 3300006186 Bacteria 1799
56 Ga0075366_10023327 3300006195 Bacteria 3605
57 Ga0075370_10009584 3300006353 Bacteria 5035
58 Ga0075370_10056878 3300006353 Bacteria 2223
59 Ga0075370_10111234 3300006353 Bacteria 1591
60 Ga0068871_100014577 3300006358 Bacteria 5862
61 Ga0068871_100411195 3300006358 Unclassified 1206
62 Ga0075428_100082657 3300006844 Bacteria 3504
63 Ga0075433_10225327 3300006852 Bacteria 1665
64 Ga0075434_100198368 3300006871 Bacteria 2027
65 Ga0075434_100414722 3300006871 Unclassified 1368
66 Ga0068865_100044264 3300006881 Bacteria 3046
67 Ga0097620_100005465 3300006931 Bacteria 12929
68 Ga0097620_100007008 3300006931 Bacteria 11447
69 Ga0097620_100098722 3300006931 Bacteria 2974
70 Ga0075435_100037398 3300007076 Bacteria 3865
71 Ga0105247_10011403 3300009101 Bacteria 5361
72 Ga0114129_10075412 3300009147 Bacteria 4696
73 Ga0114129_10384588 3300009147 Bacteria 1853
74 Ga0105241_10080433 3300009174 Bacteria 2551
75 Ga0105248_10000774 3300009177 Bacteria 35872
76 Ga0105248_10168814 3300009177 Bacteria 2466
77 Ga0105237_10094789 3300009545 Bacteria 2974
78 Ga0105237_10116480 3300009545 Bacteria 2665
79 Ga0105239_10221269 3300010375 Bacteria 2123
80 Ga0157378_10004228 3300013297 Bacteria 12667
81 Ga0163162_10394142 3300013306 Bacteria 1517
82 Ga0163161_10494230 3300017792 Bacteria 995
83 Ga0209677_101886 3300025253 Bacteria 8474
84 Ga0209233_1010306 3300025261 Bacteria 2807
85 Ga0209455_1012102 3300025272 Bacteria 2083
86 Ga0207426_1000225 3300025302 Bacteria 129646
87 Ga0207710_10008414 3300025900 Bacteria 4349
88 Ga0207680_10081783 3300025903 Bacteria 2031
89 Ga0207707_10294436 3300025912 Bacteria 1404
90 Ga0207671_10033856 3300025914 Bacteria 3799
91 Ga0207671_10150086 3300025914 Bacteria 1800
92 Ga0207671_10257450 3300025914 Bacteria 1373
93 Ga0207693_10398071 3300025915 Bacteria 1077
94 Ga0207694_10059731 3300025924 Bacteria 2966
95 Ga0207687_10068989 3300025927 Bacteria 2520
96 Ga0207706_10107624 3300025933 Bacteria 2453
97 Ga0207686_10026466 3300025934 Bacteria 3384
98 Ga0207686_10430230 3300025934 Bacteria 1011
99 Ga0207711_10003926 3300025941 Bacteria 12797
100 Ga0207711_10025166 3300025941 Bacteria 4994
101 Ga0207711_10638303 3300025941 Bacteria 993
102 Ga0207689_10024033 3300025942 Bacteria 5112
103 Ga0207689_10256062 3300025942 Bacteria 1448
104 Ga0207679_10002963 3300025945 Bacteria 10525
105 Ga0207677_10107690 3300026023 Bacteria 2068
106 Ga0207677_10276407 3300026023 Bacteria 1376
107 Ga0207703_10097264 3300026035 Bacteria 2487
108 Ga0207703_10251344 3300026035 Bacteria 1594
109 Ga0207703_10382812 3300026035 Bacteria 1302
110 Ga0207708_10154162 3300026075 Bacteria 1811
111 Ga0207641_10089679 3300026088 Bacteria 2688
112 Ga0207641_10447649 3300026088 Bacteria 1247
113 Ga0207648_10577580 3300026089 Bacteria 1034
114 Ga0207676_10016167 3300026095 Bacteria 5400
115 Ga0207675_100000078 3300026118 Bacteria 75565
116 Ga0207698_10118646 3300026142 Bacteria 2235
117 Ga0209813_10029736 3300027866 Bacteria 1601
118 Ga0268266_10114259 3300028379 Bacteria 2395
119 Ga0268264_10084774 3300028381 Bacteria 2717
120 Ga0307509_10035928 3300031507 Bacteria 5432
121 Ga0307416_100146292 3300032002 Bacteria 2158
122 Ga0307510_10251477 3300033180 Bacteria 1255
123 Ga0395899_0016648 3300037312 Bacteria 5607
124 Ga0395899_0103380 3300037312 Bacteria 2055
125 Ga0395900_0006973 3300037418 Bacteria 11707
126 Ga0395900_0008410 3300037418 Bacteria 10619
127 Ga0395900_0019254 3300037418 Bacteria 6959
128 Ga0395900_0032094 3300037418 Bacteria 5399
129 Ga0395900_0114305 3300037418 Bacteria 2770
130 Ga0395900_0551204 3300037418 Bacteria 1097
131 Ga0395898_0005606 3300037466 Bacteria 13532
132 Ga0395898_0098761 3300037466 Bacteria 2803
133 Ga0395898_0293821 3300037466 Bacteria 1550
134 Ga0395898_0421793 3300037466 Bacteria 1271
135 Ga0395905_0017073 3300037471 Bacteria 6892
136 Ga0395905_0185525 3300037471 Bacteria 1952
137 Ga0395905_0191587 3300037471 Bacteria 1918
138 Ga0395905_0516994 3300037471 Bacteria 1094
139 Ga0395901_0002526 3300038443 Bacteria 18540
140 Ga0395901_0016960 3300038443 Bacteria 7422
141 Ga0395901_0020563 3300038443 Bacteria 6754
142 Ga0395901_0146610 3300038443 Bacteria 2480
143 Ga0395901_0221008 3300038443 Bacteria 1980
144 Ga0395901_0319070 3300038443 Unclassified 1608
145 Ga0395901_0837217 3300038443 Unclassified 906
146 Ga0436363_0684325 3300039450 Bacteria 1812
147 Ga0495617_005164 3300046452 Bacteria 4662
148 Ga0495590_0072027 3300046457 Bacteria 1214
149 Ga0495638_0002335 3300046460 Bacteria 15593
150 Ga0495641_0113984 3300046461 Unclassified 1206
151 Ga0495584_0018623 3300046491 Bacteria 3530
152 Ga0495584_0063259 3300046491 Bacteria 1860
153 Ga0495583_0000021 3300046506 Bacteria 287046
154 Ga0495616_0074908 3300046513 Bacteria 1630
155 Ga0495616_0126153 3300046513 Bacteria 1177
156 Ga0495632_0097314 3300046519 Bacteria 1389
157 Ga0495648_0019306 3300046524 Bacteria 4798
158 Ga0495642_0079768 3300046528 Bacteria 1377
159 Ga0495654_0159377 3300046530 Bacteria 992
160 Ga0495609_0000097 3300046538 Bacteria 103246
161 Ga0495668_0011187 3300046616 Bacteria 5385
162 Ga0495668_0106689 3300046616 Bacteria 1532
163 Ga0495611_0000159 3300046648 Bacteria 48631
164 Ga0495625_0001137 3300046660 Bacteria 34397
165 Ga0495625_0282129 3300046660 Unclassified 1068
166 Ga0495659_0003583 3300046664 Bacteria 4940
167 Ga0495649_0096571 3300046694 Bacteria 1572
168 Ga0495687_001982 3300047443 Bacteria 17454
169 Ga0495677_0002034 3300047445 Bacteria 8067
170 Ga0495673_0114346 3300047469 Bacteria 1075
171 Ga0496104_0001802 3300048907 Bacteria 18572
172 Ga0496105_0001132 3300048908 Bacteria 18572
173 Ga0496106_0030617 3300048909 Bacteria 4011
174 Ga0496106_0224569 3300048909 Bacteria 1498
175 Ga0496114_0078997 3300048917 Bacteria 2776
176 Ga0496115_0054157 3300048918 Bacteria 3221
177 Ga0496117_0018247 3300048920 Bacteria 5823
178 Ga0496118_0023568 3300048921 Bacteria 5342
179 Ga0496121_0000191 3300048924 Bacteria 136529
180 Ga0496121_0068345 3300048924 Bacteria 2874
181 Ga0496124_0002311 3300048927 Bacteria 25168
182 Ga0496124_0118594 3300048927 Bacteria 2118
183 Ga0496125_0015093 3300048928 Bacteria 7494
184 Ga0495682_0003913 3300049460 Bacteria 6503
185 Ga0501048_0039544 3300049582 Bacteria 3383
186 nmdc:mga03683_42819_c1 3300050489 Bacteria 1865
187 nmdc:mga00v17_13857_c1 3300050491 Bacteria 1582
188 nmdc:mga00v17_43105_c1 3300050491 Bacteria 2716
189 nmdc:mga0yw44_7086_c1 3300050492 Bacteria 5488
190 nmdc:mga0k408_9316_c1 3300050493 Bacteria 5292
191 nmdc:mga06z11_56875_c1 3300050494 Bacteria 2024
192 nmdc:mga07m45_5640_c1 3300050496 Bacteria 6254
193 nmdc:mga05p37_47392_c1 3300050507 Bacteria 5285
194 nmdc:mga0n895_198175_c1 3300050512 Bacteria 2039
195 nmdc:mga0n895_353628_c1 3300050512 Bacteria 1488
196 nmdc:mga0n895_453683_c1 3300050512 Bacteria 1294
197 nmdc:mga0rr50_405604_c1 3300050513 Bacteria 1152
198 nmdc:mga0a205_257514_c1 3300050515 Bacteria 1623
199 nmdc:mga0sz30_31384_c1 3300050516 Bacteria 2198
200 nmdc:mga0sz30_757_c1 3300050516 Bacteria 11811
201 Ga0500583_0074207 3300053092 Bacteria 1632
202 Ga0500651_0079820 3300053093 Bacteria 2027
203 Ga0500569_003195 3300053109 Bacteria 3316
204 Ga0500573_0030793 3300053140 Bacteria 3095
205 Ga0500588_0078475 3300053146 Bacteria 1099
206 Ga0500616_0000212 3300053153 Bacteria 93017
207 Ga0500616_0080864 3300053153 Bacteria 1633
208 Ga0500636_0019346 3300053177 Bacteria 4029
209 Ga0500596_002177 3300053735 Bacteria 3882
210 2513621593 2513237092 Bacteria 8341956
211 2513696716 2513237101 Bacteria 7952346
212 2513877396 2513237139 Bacteria 8737671
213 2514013067 2513237161 Bacteria 8871253
214 2524437276 2524023205 Bacteria 8918781
215 2617348227 2617270735 Bacteria 9163226
216 2805918953 2802429603 Bacteria 8777136
217 2824675614 2824671348 Bacteria 8369588
218 2824689648 2824687955 Bacteria 8360029
219 2824700624 2824696289 Bacteria 8335049
220 2824773781 2824773399 Bacteria 8360218
221 2841947598 2841941048 Bacteria 8688029
222 2841956566 2841949485 Bacteria 8680857
223 2841971634 2841966195 Bacteria 8673214
224 2841982602 2841974524 Bacteria 8931498
225 2841986806 2841983080 Bacteria 8395090
226 2847940215 2847939898 Bacteria 8606328
227 2874617560 2874612657 Bacteria 8252029
228 2906644238 2906643746 Bacteria 8722424
229 2922387139 2922386360 Bacteria 7017218
230 2924740183 2924733363 Bacteria 7574837
231 2924768242 2924762789 Bacteria 6561353
232 2935700811 2935694250 Bacteria 9291695
233 2935784416 2935777560 Bacteria 8077691
234 2937851072 2937848649 Bacteria 6983481
235 2977926216 2977922695 Bacteria 6956781
236 2987671338 2987666974 Bacteria 6509233
237 3000139740 3000135777 Bacteria 6891109
238 3004215185 3004211236 Bacteria 7417683
239 3004220774 3004218560 Bacteria 7421728
240 8006968504 8006964411 Bacteria 8966052
241 8016604388 8016603502 Bacteria 8731218
242 8016620967 8016613128 Bacteria 8794220
243 8019542785 8019538911 Bacteria 7872763
244 8019652902 8019648815 Bacteria 10014479
245 rootH1_10053291
246 rootH2_10091510
247 rootH2_10092601
248 rootH2_10111212
249 rootH2_10211094
250 rootL2_10129236
251 rootH1_10074586
252 rootH1_10155304
253 JGI25160J50197_1000263
254 Ga0055539_1008220
255 Ga0070676_10392548
256 Ga0070670_100022698
257 Ga0070666_10249891
258 Ga0068868_100003888
259 Ga0068868_100110343
260 Ga0070671_100002074
261 Ga0070688_100158981
262 Ga0070659_100092875
263 Ga0070667_100012853
264 Ga0070667_100230945
265 Ga0070694_100121674
266 Ga0070663_100109929
267 Ga0070678_100290140
268 Ga0070662_100109604
269 Ga0070681_10319077
270 Ga0070699_100168122
271 Ga0070686_100061930
272 Ga0070704_100122476
273 Ga0068855_100248518
274 Ga0068852_100136544
275 Ga0068859_100005465
276 Ga0068859_100007008
277 Ga0068859_100098718
278 Ga0068864_100003905
279 Ga0068861_100000342
280 Ga0068861_100036400
281 Ga0068863_100006320
282 Ga0068863_100058295
283 Ga0068858_100008967
284 Ga0068858_100314038
285 Ga0068862_100015773
286 Ga0081455_10007929
287 Ga0081455_10016006
288 Ga0081455_10048034
289 Ga0081540_1002682
290 Ga0081540_1005591
291 Ga0081540_1020063
292 Ga0081539_10000155
293 Ga0075365_10010445
294 Ga0075368_10113890
295 Ga0075364_10050524
296 Ga0075362_10031230
297 Ga0075367_10208870
298 Ga0075369_10000537
299 Ga0075369_10050479
300 Ga0075366_10023327
301 Ga0075370_10009584
302 Ga0075370_10056878
303 Ga0075370_10111234
304 Ga0068871_100014577
305 Ga0068871_100411195
306 Ga0075428_100082657
307 Ga0075433_10225327
308 Ga0075434_100198368
309 Ga0075434_100414722
310 Ga0068865_100044264
311 Ga0097620_100005465
312 Ga0097620_100007008
313 Ga0097620_100098722
314 Ga0075435_100037398
315 Ga0105247_10011403
316 Ga0114129_10075412
317 Ga0114129_10384588
318 Ga0105241_10080433
319 Ga0105248_10000774
320 Ga0105248_10168814
321 Ga0105237_10094789
322 Ga0105237_10116480
323 Ga0105239_10221269
324 Ga0157378_10004228
325 Ga0163162_10394142
326 Ga0163161_10494230
327 Ga0209677_101886
328 Ga0209233_1010306
329 Ga0209455_1012102
330 Ga0207426_1000225
331 Ga0207710_10008414
332 Ga0207680_10081783
333 Ga0207707_10294436
334 Ga0207671_10033856
335 Ga0207671_10150086
336 Ga0207671_10257450
337 Ga0207693_10398071
338 Ga0207694_10059731
339 Ga0207687_10068989
340 Ga0207706_10107624
341 Ga0207686_10026466
342 Ga0207686_10430230
343 Ga0207711_10003926
344 Ga0207711_10025166
345 Ga0207711_10638303
346 Ga0207689_10024033
347 Ga0207689_10256062
348 Ga0207679_10002963
349 Ga0207677_10107690
350 Ga0207677_10276407
351 Ga0207703_10097264
352 Ga0207703_10251344
353 Ga0207703_10382812
354 Ga0207708_10154162
355 Ga0207641_10089679
356 Ga0207641_10447649
357 Ga0207648_10577580
358 Ga0207676_10016167
359 Ga0207675_100000078
360 Ga0207698_10118646
361 Ga0209813_10029736
362 Ga0268266_10114259
363 Ga0268264_10084774
364 Ga0307509_10035928
365 Ga0307416_100146292
366 Ga0307510_10251477
367 Ga0395899_0016648
368 Ga0395899_0103380
369 Ga0395900_0006973
370 Ga0395900_0008410
371 Ga0395900_0019254
372 Ga0395900_0032094
373 Ga0395900_0114305
374 Ga0395900_0551204
375 Ga0395898_0005606
376 Ga0395898_0098761
377 Ga0395898_0293821
378 Ga0395898_0421793
379 Ga0395905_0017073
380 Ga0395905_0185525
381 Ga0395905_0191587
382 Ga0395905_0516994
383 Ga0395901_0002526
384 Ga0395901_0016960
385 Ga0395901_0020563
386 Ga0395901_0146610
387 Ga0395901_0221008
388 Ga0395901_0319070
389 Ga0395901_0837217
390 Ga0436363_0684325
391 Ga0495617_005164
392 Ga0495590_0072027
393 Ga0495638_0002335
394 Ga0495641_0113984
395 Ga0495584_0018623
396 Ga0495584_0063259
397 Ga0495583_0000021
398 Ga0495616_0074908
399 Ga0495616_0126153
400 Ga0495632_0097314
401 Ga0495648_0019306
402 Ga0495642_0079768
403 Ga0495654_0159377
404 Ga0495609_0000097
405 Ga0495668_0011187
406 Ga0495668_0106689
407 Ga0495611_0000159
408 Ga0495625_0001137
409 Ga0495625_0282129
410 Ga0495659_0003583
411 Ga0495649_0096571
412 Ga0495687_001982
413 Ga0495677_0002034
414 Ga0495673_0114346
415 Ga0496104_0001802
416 Ga0496105_0001132
417 Ga0496106_0030617
418 Ga0496106_0224569
419 Ga0496114_0078997
420 Ga0496115_0054157
421 Ga0496117_0018247
422 Ga0496118_0023568
423 Ga0496121_0000191
424 Ga0496121_0068345
425 Ga0496124_0002311
426 Ga0496124_0118594
427 Ga0496125_0015093
428 Ga0495682_0003913
429 Ga0501048_0039544
430 nmdc:mga03683_42819_c1
431 nmdc:mga00v17_13857_c1
432 nmdc:mga00v17_43105_c1
433 nmdc:mga0yw44_7086_c1
434 nmdc:mga0k408_9316_c1
435 nmdc:mga06z11_56875_c1
436 nmdc:mga07m45_5640_c1
437 nmdc:mga05p37_47392_c1
438 nmdc:mga0n895_198175_c1
439 nmdc:mga0n895_353628_c1
440 nmdc:mga0n895_453683_c1
441 nmdc:mga0rr50_405604_c1
442 nmdc:mga0a205_257514_c1
443 nmdc:mga0sz30_31384_c1
444 nmdc:mga0sz30_757_c1
445 Ga0500583_0074207
446 Ga0500651_0079820
447 Ga0500569_003195
448 Ga0500573_0030793
449 Ga0500588_0078475
450 Ga0500616_0000212
451 Ga0500616_0080864
452 Ga0500636_0019346
453 Ga0500596_002177
454 2513621593
455 2513696716
456 2513877396
457 2514013067
458 2524437276
459 2617348227
460 2805918953
461 2824675614
462 2824689648
463 2824700624
464 2824773781
465 2841947598
466 2841956566
467 2841971634
468 2841982602
469 2841986806
470 2847940215
471 2874617560
472 2906644238
473 2922387139
474 2924740183
475 2924768242
476 2935700811
477 2935784416
478 2937851072
479 2977926216
480 2987671338
481 3000139740
482 3004215185
483 3004220774
484 8006968504
485 8016604388
486 8016620967
487 8019542785
488 8019652902

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00561

Abhydrolase_1

alpha/beta hydrolase fold

29

143

0.89

PF12146

Hydrolase_4

Serine aminopeptidase, S33

30

265

0.68

PF12697

Abhydrolase_6

Alpha/beta hydrolase family

31

277

0.63

Structural Annotation

Top 5 Hits

ID Description Score Start End
5o2g-assembly1.cif.gz_B crystal structure determination from picosecond infrared laser ablated protein crystals by serial synchrotron crystallography 0.8741 8 281
7clz-assembly2.cif.gz_D crystal structure of alp1u w187f/y247f in complex with fluostatin c 0.8711 9 281
4nvr-assembly2.cif.gz_D 2.22 angstrom resolution crystal structure of a putative acyltransferase from salmonella enterica 0.8641 9 281
3kd2-assembly2.cif.gz_C crystal structure of the cftr inhibitory factor cif 0.8637 8 281
6qhz-assembly1.cif.gz_B time resolved structural analysis of the full turnover of an enzyme - 6788 ms 0.8629 8 281
ID Description Score Start End Superfamily
af_Q9NQF3_11_190_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9182 8 120 3.40.50.1820
4mebB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8613 3 281 3.40.50.1820
1j1iA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8585 8 281 3.40.50.1820
af_A0A1D6JHK5_54_270_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8576 78 129 3.40.50.1820
af_A0A0R4ILH2_75_359_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.857 10 281 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A511XCG0-F1-model_v4 Alpha/beta hydrolase 0.9621 4 280 GO:0016787
AF-A0A250KTF4-F1-model_v4 AB hydrolase-1 domain-containing protein 0.9604 9 281 GO:0016787
AF-N0B0P6-F1-model_v4 Alpha/beta hydrolase 0.9571 1 281 GO:0016787
AF-N0B0P6-F1-model_v4 Alpha/beta hydrolase 0.9538 1 281 GO:0016787
AF-A0A2E4E2Q1-F1-model_v4 AB hydrolase-1 domain-containing protein 0.9529 8 280 GO:0016787

Map