F355077
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 242 | 128 | 484 | 353 |
Family's Representative Sequence
| Representative Sequence | 3300049741|Ga0501079_0048990|Ga0501079_0048990_485_1720 |
| Length | 411 |
| Sequence | MAEFVMPTLGADMTEGTLVAWKKKVGDRVEKGDIIAEVETDKATIEVEVFTSGMIERLVAQPGDKVPVGTVMATIREEETAGPAPSPQPVKPIVQPEGLPPAAREEFRITMPPPFPAETPAIAPARTQEPRLRISPAARQLADQLGIDPATVTGTGPDGAITREDIQRVAGRTEVPAPPSARPDAQAQAGRMVRMRQTIAAAMARSKREIPHYYLSTTIDLHQALSWRVAENAARSVADRLLPSALLIKAVGLALKEVPELNSVWKDGQVVTSQSIHVGVAIALRGGGLVAPALHNTDRLSLTDVMGKLQDLVKRARAGSLRSSELSDPTVTVTNLGDLGVDSVLGVIYPPQVALVGFGKVAERPWVIEGQVVARPLITASLSADHRVSDGHRGGRFLAAVDRLLQSPGGL |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 2 | 3300001915 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 | Metagenome | Rhizosphere |
| 3 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 4 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 5 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 6 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 10 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 12 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 13 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 15 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 16 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 17 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 18 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 19 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 20 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 21 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 22 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 23 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 24 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 26 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 27 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 28 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 29 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300028556 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG | Metagenome | Rhizosphere |
| 42 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 43 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 44 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 45 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 46 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 47 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 48 | 3300033528 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 49 | 3300035083 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 | Metagenome | Rhizosphere |
| 50 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 51 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 52 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 53 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 54 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 55 | 3300041408 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 | Metagenome | Rhizosphere |
| 56 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 57 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 58 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 59 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 60 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 61 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300046491 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere | Metagenome | Rhizosphere |
| 63 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 64 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 65 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 66 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 77 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 78 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 79 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 80 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 81 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 82 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 83 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 84 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 85 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 86 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 87 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 88 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 89 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 90 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 91 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 92 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 93 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 94 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 95 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 96 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 97 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 98 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 99 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 100 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 101 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 102 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 103 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 104 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 105 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 106 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 107 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 108 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 109 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 110 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 111 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 112 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 113 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 114 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 118 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 119 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 120 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 121 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 124 | 3300059424 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 125 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 126 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 127 | 2883291878 | Hypericibacter terrae R5913 | Isolate | Rhizosphere |
| 128 | 2939598168 | Arthrobacter sp. 754 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 98.35 |
| Metatranscriptomes | 0.83 |
| Isolates | 0.83 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 4.55 |
| Rhizosphere | 93.39 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.89 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0501079_0048990 | 3300049741 | Bacteria | 3261 |
| 2 | JGI24741J21665_1000206 | 3300001915 | Bacteria | 17523 |
| 3 | JGI24740J21852_10000139 | 3300001979 | Bacteria | 27863 |
| 4 | rootH1_10097487 | 3300003316 | Bacteria | 2144 |
| 5 | Ga0065715_10002876 | 3300005293 | Bacteria | 8508 |
| 6 | Ga0070670_100065375 | 3300005331 | Bacteria | 3121 |
| 7 | Ga0070661_100000104 | 3300005344 | Bacteria | 69475 |
| 8 | Ga0070659_100045326 | 3300005366 | Plasmid | 3444 |
| 9 | Ga0070694_100037950 | 3300005444 | Bacteria | 3198 |
| 10 | Ga0070663_100000564 | 3300005455 | Bacteria | 19755 |
| 11 | Ga0070698_100254859 | 3300005471 | Unclassified | 1687 |
| 12 | Ga0070697_100012225 | 3300005536 | Bacteria | 6723 |
| 13 | Ga0070664_100000037 | 3300005564 | Bacteria | 81234 |
| 14 | Ga0068856_100032391 | 3300005614 | Bacteria | 5117 |
| 15 | Ga0068864_100000945 | 3300005618 | Bacteria | 24299 |
| 16 | Ga0068870_10014237 | 3300005840 | Bacteria | 3754 |
| 17 | Ga0070712_100045122 | 3300006175 | Bacteria | 3042 |
| 18 | Ga0075428_100098391 | 3300006844 | Bacteria | 3189 |
| 19 | Ga0075433_10145293 | 3300006852 | Unclassified | 2108 |
| 20 | Ga0105240_10043729 | 3300009093 | Bacteria | 5696 |
| 21 | Ga0111539_10122040 | 3300009094 | Bacteria | 3053 |
| 22 | Ga0114129_10003494 | 3300009147 | Bacteria | 22095 |
| 23 | Ga0114129_10009810 | 3300009147 | Bacteria | 13655 |
| 24 | Ga0105237_10045845 | 3300009545 | Bacteria | 4399 |
| 25 | Ga0105246_10004598 | 3300011119 | Bacteria | 8400 |
| 26 | Ga0157371_10000213 | 3300013102 | Bacteria | 84696 |
| 27 | Ga0157372_10000116 | 3300013307 | Bacteria | 84694 |
| 28 | Ga0163163_10026784 | 3300014325 | Bacteria | 5515 |
| 29 | Ga0209759_1000488 | 3300025256 | Bacteria | 43668 |
| 30 | Ga0207695_10035127 | 3300025913 | Bacteria | 5440 |
| 31 | Ga0207671_10041811 | 3300025914 | Bacteria | 3392 |
| 32 | Ga0207693_10197932 | 3300025915 | Bacteria | 1580 |
| 33 | Ga0207649_10000105 | 3300025920 | Bacteria | 69483 |
| 34 | Ga0207650_10037763 | 3300025925 | Bacteria | 3522 |
| 35 | Ga0207691_10213257 | 3300025940 | Bacteria | 1676 |
| 36 | Ga0207679_10000067 | 3300025945 | Bacteria | 96016 |
| 37 | Ga0207668_10256458 | 3300025972 | Bacteria | 1423 |
| 38 | Ga0207678_10000041 | 3300026067 | Bacteria | 96726 |
| 39 | Ga0207702_10000605 | 3300026078 | Bacteria | 39648 |
| 40 | Ga0207641_10339534 | 3300026088 | Bacteria | 1429 |
| 41 | Ga0207674_10003402 | 3300026116 | Bacteria | 19502 |
| 42 | Ga0265337_1000205 | 3300028556 | Bacteria | 31699 |
| 43 | Ga0307509_10047224 | 3300031507 | Bacteria | 4632 |
| 44 | Ga0307509_10222486 | 3300031507 | Unclassified | 1699 |
| 45 | Ga0307408_100007538 | 3300031548 | Bacteria | 7193 |
| 46 | Ga0307408_100247855 | 3300031548 | Bacteria | 1467 |
| 47 | Ga0316578_10059122 | 3300031728 | Bacteria | 2254 |
| 48 | Ga0307413_10072793 | 3300031824 | Unclassified | 2170 |
| 49 | Ga0307412_10000966 | 3300031911 | Bacteria | 16391 |
| 50 | Ga0307412_10010972 | 3300031911 | Bacteria | 5231 |
| 51 | Ga0307416_100070856 | 3300032002 | Bacteria | 2893 |
| 52 | Ga0316588_1000885 | 3300033528 | Bacteria | 4570 |
| 53 | Ga0316588_1001709 | 3300033528 | Bacteria | 3680 |
| 54 | Ga0373926_0031578 | 3300035083 | Bacteria | 1868 |
| 55 | Ga0316574_0004009 | 3300035398 | Bacteria | 7671 |
| 56 | Ga0373935_0144615 | 3300035692 | Bacteria | 1609 |
| 57 | Ga0373927_0020533 | 3300035695 | Bacteria | 4332 |
| 58 | Ga0373937_0029376 | 3300036401 | Bacteria | 4979 |
| 59 | Ga0373937_0327669 | 3300036401 | Bacteria | 1449 |
| 60 | Ga0439436_0046437 | 3300041404 | Bacteria | 1234 |
| 61 | Ga0439453_0005931 | 3300041408 | Bacteria | 1882 |
| 62 | Ga0439449_0003434 | 3300042007 | Bacteria | 6167 |
| 63 | Ga0439434_0026860 | 3300042435 | Bacteria | 1739 |
| 64 | Ga0495629_0009408 | 3300046459 | Bacteria | 7147 |
| 65 | Ga0495641_0032780 | 3300046461 | Bacteria | 2470 |
| 66 | Ga0495651_0002459 | 3300046462 | Bacteria | 14320 |
| 67 | Ga0495651_0080797 | 3300046462 | Bacteria | 2455 |
| 68 | Ga0495653_0207673 | 3300046463 | Bacteria | 1325 |
| 69 | Ga0495584_0009231 | 3300046491 | Bacteria | 5086 |
| 70 | Ga0495585_0000287 | 3300046492 | Bacteria | 50518 |
| 71 | Ga0495608_0004431 | 3300046511 | Bacteria | 10056 |
| 72 | Ga0495630_0128192 | 3300046517 | Bacteria | 1926 |
| 73 | Ga0495587_0025306 | 3300046536 | Bacteria | 3627 |
| 74 | Ga0495587_0060446 | 3300046536 | Bacteria | 2222 |
| 75 | Ga0495633_0046701 | 3300046558 | Bacteria | 2048 |
| 76 | Ga0495667_0012279 | 3300046559 | Bacteria | 5806 |
| 77 | Ga0495635_0037485 | 3300046663 | Bacteria | 3356 |
| 78 | Ga0495657_0001472 | 3300046675 | Bacteria | 20271 |
| 79 | Ga0495657_0002508 | 3300046675 | Bacteria | 15434 |
| 80 | Ga0495604_0074882 | 3300047317 | Bacteria | 2550 |
| 81 | Ga0495674_0018648 | 3300047319 | Bacteria | 6457 |
| 82 | Ga0495676_0066995 | 3300047321 | Bacteria | 2779 |
| 83 | Ga0495680_0003919 | 3300047322 | Bacteria | 14398 |
| 84 | Ga0495680_0026868 | 3300047322 | Bacteria | 4739 |
| 85 | Ga0495684_0194863 | 3300047471 | Bacteria | 1496 |
| 86 | Ga0496102_0029367 | 3300048905 | Bacteria | 4921 |
| 87 | Ga0496102_0061657 | 3300048905 | Bacteria | 3432 |
| 88 | Ga0496103_0187055 | 3300048906 | Bacteria | 1331 |
| 89 | Ga0496104_0012115 | 3300048907 | Bacteria | 7742 |
| 90 | Ga0496105_0006501 | 3300048908 | Bacteria | 8987 |
| 91 | Ga0496108_0049070 | 3300048911 | Bacteria | 3530 |
| 92 | Ga0496109_0001375 | 3300048912 | Bacteria | 20176 |
| 93 | Ga0496110_0005932 | 3300048913 | Bacteria | 9614 |
| 94 | Ga0496111_0007035 | 3300048914 | Bacteria | 7351 |
| 95 | Ga0496112_0009659 | 3300048915 | Bacteria | 8705 |
| 96 | Ga0496113_0000087 | 3300048916 | Bacteria | 40247 |
| 97 | Ga0496121_0007300 | 3300048924 | Bacteria | 13369 |
| 98 | Ga0501031_0000532 | 3300049568 | Bacteria | 22249 |
| 99 | Ga0501031_0033623 | 3300049568 | Bacteria | 3346 |
| 100 | Ga0501032_0018418 | 3300049569 | Bacteria | 4893 |
| 101 | Ga0501033_0000987 | 3300049570 | Bacteria | 25891 |
| 102 | Ga0501034_0000553 | 3300049571 | Bacteria | 59344 |
| 103 | Ga0501036_0000681 | 3300049572 | Bacteria | 25022 |
| 104 | Ga0501036_0006748 | 3300049572 | Bacteria | 9331 |
| 105 | Ga0501036_0021819 | 3300049572 | Bacteria | 5383 |
| 106 | Ga0501036_0030266 | 3300049572 | Bacteria | 4575 |
| 107 | Ga0501036_0068883 | 3300049572 | Bacteria | 2994 |
| 108 | Ga0501036_0101622 | 3300049572 | Bacteria | 2432 |
| 109 | Ga0501036_0170811 | 3300049572 | Bacteria | 1832 |
| 110 | Ga0501037_0001001 | 3300049573 | Bacteria | 20939 |
| 111 | Ga0501037_0044737 | 3300049573 | Bacteria | 3251 |
| 112 | Ga0501038_0001029 | 3300049574 | Bacteria | 25172 |
| 113 | Ga0501038_0034729 | 3300049574 | Bacteria | 4432 |
| 114 | Ga0501038_0074111 | 3300049574 | Bacteria | 2881 |
| 115 | Ga0501039_0007217 | 3300049575 | Bacteria | 8468 |
| 116 | Ga0501039_0012530 | 3300049575 | Bacteria | 6477 |
| 117 | Ga0501039_0045976 | 3300049575 | Bacteria | 3373 |
| 118 | Ga0501039_0055468 | 3300049575 | Bacteria | 3069 |
| 119 | Ga0501040_0001264 | 3300049576 | Bacteria | 16082 |
| 120 | Ga0501040_0007554 | 3300049576 | Bacteria | 7030 |
| 121 | Ga0501040_0031706 | 3300049576 | Bacteria | 3573 |
| 122 | Ga0501040_0082513 | 3300049576 | Bacteria | 2229 |
| 123 | Ga0501040_0131248 | 3300049576 | Bacteria | 1762 |
| 124 | Ga0501041_0000640 | 3300049577 | Bacteria | 18331 |
| 125 | Ga0501041_0005438 | 3300049577 | Bacteria | 7460 |
| 126 | Ga0501041_0027231 | 3300049577 | Bacteria | 3444 |
| 127 | Ga0501041_0033494 | 3300049577 | Bacteria | 3108 |
| 128 | Ga0501042_0014330 | 3300049578 | Bacteria | 5410 |
| 129 | Ga0501042_0017270 | 3300049578 | Bacteria | 4974 |
| 130 | Ga0501042_0099921 | 3300049578 | Bacteria | 2086 |
| 131 | Ga0501042_0114167 | 3300049578 | Bacteria | 1945 |
| 132 | Ga0501043_0000750 | 3300049579 | Bacteria | 28826 |
| 133 | Ga0501043_0001646 | 3300049579 | Bacteria | 19403 |
| 134 | Ga0501043_0081547 | 3300049579 | Bacteria | 2542 |
| 135 | Ga0501046_0000475 | 3300049580 | Bacteria | 40215 |
| 136 | Ga0501046_0010062 | 3300049580 | Bacteria | 8145 |
| 137 | Ga0501046_0043455 | 3300049580 | Bacteria | 3577 |
| 138 | Ga0501046_0056997 | 3300049580 | Bacteria | 3065 |
| 139 | Ga0501046_0262556 | 3300049580 | Bacteria | 1268 |
| 140 | Ga0501047_0000004 | 3300049581 | Bacteria | 463872 |
| 141 | Ga0501047_0001366 | 3300049581 | Bacteria | 23962 |
| 142 | Ga0501048_0000881 | 3300049582 | Bacteria | 22170 |
| 143 | Ga0501048_0028673 | 3300049582 | Bacteria | 4041 |
| 144 | Ga0501048_0054563 | 3300049582 | Unclassified | 2839 |
| 145 | Ga0501048_0076354 | 3300049582 | Bacteria | 2364 |
| 146 | Ga0501048_0142866 | 3300049582 | Bacteria | 1692 |
| 147 | Ga0501068_0000481 | 3300049584 | Bacteria | 20160 |
| 148 | Ga0501068_0007001 | 3300049584 | Bacteria | 6238 |
| 149 | Ga0501068_0027021 | 3300049584 | Bacteria | 3386 |
| 150 | Ga0501068_0210847 | 3300049584 | Bacteria | 1233 |
| 151 | Ga0501069_0005364 | 3300049585 | Bacteria | 6668 |
| 152 | Ga0501069_0032130 | 3300049585 | Bacteria | 2889 |
| 153 | Ga0501070_0002558 | 3300049586 | Bacteria | 15924 |
| 154 | Ga0501070_0020668 | 3300049586 | Bacteria | 5522 |
| 155 | Ga0501070_0067455 | 3300049586 | Bacteria | 2963 |
| 156 | Ga0501071_0001196 | 3300049587 | Bacteria | 14649 |
| 157 | Ga0501071_0013499 | 3300049587 | Bacteria | 5568 |
| 158 | Ga0501071_0058018 | 3300049587 | Bacteria | 2798 |
| 159 | Ga0501072_0000365 | 3300049588 | Bacteria | 32224 |
| 160 | Ga0501072_0001214 | 3300049588 | Bacteria | 19236 |
| 161 | Ga0501072_0012436 | 3300049588 | Bacteria | 6503 |
| 162 | Ga0501072_0015318 | 3300049588 | Bacteria | 5881 |
| 163 | Ga0501072_0017234 | 3300049588 | Bacteria | 5553 |
| 164 | Ga0501072_0050754 | 3300049588 | Bacteria | 3266 |
| 165 | Ga0501072_0118948 | 3300049588 | Bacteria | 2105 |
| 166 | Ga0501072_0148425 | 3300049588 | Bacteria | 1869 |
| 167 | Ga0501073_0002069 | 3300049589 | Bacteria | 15002 |
| 168 | Ga0501073_0030858 | 3300049589 | Bacteria | 3826 |
| 169 | Ga0501074_0000505 | 3300049590 | Bacteria | 23892 |
| 170 | Ga0501074_0010434 | 3300049590 | Bacteria | 6741 |
| 171 | Ga0501074_0020967 | 3300049590 | Bacteria | 4745 |
| 172 | Ga0501074_0027435 | 3300049590 | Bacteria | 4129 |
| 173 | Ga0501075_0000445 | 3300049591 | Bacteria | 24506 |
| 174 | Ga0501075_0021817 | 3300049591 | Bacteria | 4671 |
| 175 | Ga0501075_0034288 | 3300049591 | Bacteria | 3779 |
| 176 | Ga0501075_0060516 | 3300049591 | Bacteria | 2853 |
| 177 | Ga0501075_0065909 | 3300049591 | Bacteria | 2732 |
| 178 | Ga0501075_0167509 | 3300049591 | Bacteria | 1676 |
| 179 | Ga0501076_0000349 | 3300049592 | Bacteria | 28511 |
| 180 | Ga0501076_0000974 | 3300049592 | Bacteria | 18753 |
| 181 | Ga0501076_0006044 | 3300049592 | Bacteria | 8758 |
| 182 | Ga0501076_0014932 | 3300049592 | Bacteria | 5861 |
| 183 | Ga0501076_0131880 | 3300049592 | Bacteria | 2027 |
| 184 | Ga0501076_0144445 | 3300049592 | Bacteria | 1934 |
| 185 | Ga0501077_0000802 | 3300049593 | Bacteria | 19026 |
| 186 | Ga0501077_0002667 | 3300049593 | Bacteria | 10702 |
| 187 | Ga0501077_0010423 | 3300049593 | Bacteria | 5783 |
| 188 | Ga0501077_0019901 | 3300049593 | Bacteria | 4246 |
| 189 | Ga0501077_0040350 | 3300049593 | Bacteria | 2974 |
| 190 | Ga0501077_0054603 | 3300049593 | Bacteria | 2537 |
| 191 | Ga0501077_0065318 | 3300049593 | Bacteria | 2307 |
| 192 | Ga0501079_0000646 | 3300049741 | Bacteria | 23202 |
| 193 | Ga0501079_0004897 | 3300049741 | Bacteria | 9924 |
| 194 | Ga0501079_0010359 | 3300049741 | Bacteria | 7085 |
| 195 | Ga0501079_0020499 | 3300049741 | Bacteria | 5055 |
| 196 | Ga0501079_0057839 | 3300049741 | Bacteria | 2992 |
| 197 | Ga0501079_0183516 | 3300049741 | Bacteria | 1633 |
| 198 | Ga0501080_0001159 | 3300049742 | Bacteria | 21759 |
| 199 | Ga0501080_0025129 | 3300049742 | Bacteria | 5529 |
| 200 | Ga0501080_0064541 | 3300049742 | Bacteria | 3405 |
| 201 | Ga0501080_0123599 | 3300049742 | Bacteria | 2397 |
| 202 | Ga0501081_0000511 | 3300049743 | Bacteria | 21798 |
| 203 | Ga0501081_0040294 | 3300049743 | Bacteria | 3198 |
| 204 | Ga0501081_0056498 | 3300049743 | Bacteria | 2713 |
| 205 | Ga0501081_0092561 | 3300049743 | Bacteria | 2127 |
| 206 | Ga0501081_0129533 | 3300049743 | Bacteria | 1802 |
| 207 | Ga0501083_0000230 | 3300049744 | Bacteria | 35835 |
| 208 | Ga0501083_0005037 | 3300049744 | Bacteria | 9358 |
| 209 | Ga0501035_0000561 | 3300049822 | Bacteria | 41148 |
| 210 | Ga0501035_0112919 | 3300049822 | Unclassified | 2380 |
| 211 | Ga0501044_0012130 | 3300049823 | Bacteria | 9332 |
| 212 | Ga0501045_0000699 | 3300049824 | Bacteria | 21322 |
| 213 | Ga0501045_0003210 | 3300049824 | Bacteria | 11177 |
| 214 | Ga0501045_0003863 | 3300049824 | Bacteria | 10312 |
| 215 | Ga0501045_0054081 | 3300049824 | Bacteria | 2935 |
| 216 | Ga0501045_0104512 | 3300049824 | Bacteria | 2098 |
| 217 | nmdc:mga05p37_4151_c1 | 3300050507 | Bacteria | 16912 |
| 218 | nmdc:mga05p37_8636_c1 | 3300050507 | Bacteria | 12043 |
| 219 | nmdc:mga08y16_24388_c1 | 3300050511 | Bacteria | 5002 |
| 220 | nmdc:mga0rr50_121985_c1 | 3300050513 | Unclassified | 2076 |
| 221 | Ga0495595_0021844 | 3300053084 | Bacteria | 2801 |
| 222 | Ga0495619_0004253 | 3300053085 | Bacteria | 9121 |
| 223 | Ga0495619_0067982 | 3300053085 | Bacteria | 2379 |
| 224 | Ga0501084_0000001 | 3300054114 | Bacteria | 346664 |
| 225 | Ga0501084_0000557 | 3300054114 | Bacteria | 28483 |
| 226 | Ga0501084_0007508 | 3300054114 | Bacteria | 8988 |
| 227 | Ga0590075_018580 | 3300059424 | Bacteria | 1720 |
| 228 | Ga0501082_0001026 | 3300060353 | Bacteria | 24703 |
| 229 | Ga0501082_0015048 | 3300060353 | Bacteria | 6667 |
| 230 | Ga0501082_0018819 | 3300060353 | Bacteria | 5950 |
| 231 | Ga0501082_0035359 | 3300060353 | Bacteria | 4305 |
| 232 | Ga0501082_0098151 | 3300060353 | Bacteria | 2533 |
| 233 | Ga0501082_0269356 | 3300060353 | Bacteria | 1482 |
| 234 | Ga0530510_0000499 | 3300061734 | Bacteria | 24903 |
| 235 | Ga0530510_0002752 | 3300061734 | Bacteria | 12078 |
| 236 | Ga0530510_0008359 | 3300061734 | Bacteria | 7212 |
| 237 | Ga0530510_0020284 | 3300061734 | Bacteria | 4726 |
| 238 | Ga0530510_0089734 | 3300061734 | Bacteria | 2241 |
| 239 | Ga0530510_0151456 | 3300061734 | Bacteria | 1713 |
| 240 | Ga0530510_0187585 | 3300061734 | Bacteria | 1534 |
| 241 | 2883293590 | 2883291878 | Bacteria | 5894118 |
| 242 | 2939600807 | 2939598168 | Bacteria | 4687164 |
| 243 | Ga0501079_0048990 | |||
| 244 | JGI24741J21665_1000206 | |||
| 245 | JGI24740J21852_10000139 | |||
| 246 | rootH1_10097487 | |||
| 247 | Ga0065715_10002876 | |||
| 248 | Ga0070670_100065375 | |||
| 249 | Ga0070661_100000104 | |||
| 250 | Ga0070659_100045326 | |||
| 251 | Ga0070694_100037950 | |||
| 252 | Ga0070663_100000564 | |||
| 253 | Ga0070698_100254859 | |||
| 254 | Ga0070697_100012225 | |||
| 255 | Ga0070664_100000037 | |||
| 256 | Ga0068856_100032391 | |||
| 257 | Ga0068864_100000945 | |||
| 258 | Ga0068870_10014237 | |||
| 259 | Ga0070712_100045122 | |||
| 260 | Ga0075428_100098391 | |||
| 261 | Ga0075433_10145293 | |||
| 262 | Ga0105240_10043729 | |||
| 263 | Ga0111539_10122040 | |||
| 264 | Ga0114129_10003494 | |||
| 265 | Ga0114129_10009810 | |||
| 266 | Ga0105237_10045845 | |||
| 267 | Ga0105246_10004598 | |||
| 268 | Ga0157371_10000213 | |||
| 269 | Ga0157372_10000116 | |||
| 270 | Ga0163163_10026784 | |||
| 271 | Ga0209759_1000488 | |||
| 272 | Ga0207695_10035127 | |||
| 273 | Ga0207671_10041811 | |||
| 274 | Ga0207693_10197932 | |||
| 275 | Ga0207649_10000105 | |||
| 276 | Ga0207650_10037763 | |||
| 277 | Ga0207691_10213257 | |||
| 278 | Ga0207679_10000067 | |||
| 279 | Ga0207668_10256458 | |||
| 280 | Ga0207678_10000041 | |||
| 281 | Ga0207702_10000605 | |||
| 282 | Ga0207641_10339534 | |||
| 283 | Ga0207674_10003402 | |||
| 284 | Ga0265337_1000205 | |||
| 285 | Ga0307509_10047224 | |||
| 286 | Ga0307509_10222486 | |||
| 287 | Ga0307408_100007538 | |||
| 288 | Ga0307408_100247855 | |||
| 289 | Ga0316578_10059122 | |||
| 290 | Ga0307413_10072793 | |||
| 291 | Ga0307412_10000966 | |||
| 292 | Ga0307412_10010972 | |||
| 293 | Ga0307416_100070856 | |||
| 294 | Ga0316588_1000885 | |||
| 295 | Ga0316588_1001709 | |||
| 296 | Ga0373926_0031578 | |||
| 297 | Ga0316574_0004009 | |||
| 298 | Ga0373935_0144615 | |||
| 299 | Ga0373927_0020533 | |||
| 300 | Ga0373937_0029376 | |||
| 301 | Ga0373937_0327669 | |||
| 302 | Ga0439436_0046437 | |||
| 303 | Ga0439453_0005931 | |||
| 304 | Ga0439449_0003434 | |||
| 305 | Ga0439434_0026860 | |||
| 306 | Ga0495629_0009408 | |||
| 307 | Ga0495641_0032780 | |||
| 308 | Ga0495651_0002459 | |||
| 309 | Ga0495651_0080797 | |||
| 310 | Ga0495653_0207673 | |||
| 311 | Ga0495584_0009231 | |||
| 312 | Ga0495585_0000287 | |||
| 313 | Ga0495608_0004431 | |||
| 314 | Ga0495630_0128192 | |||
| 315 | Ga0495587_0025306 | |||
| 316 | Ga0495587_0060446 | |||
| 317 | Ga0495633_0046701 | |||
| 318 | Ga0495667_0012279 | |||
| 319 | Ga0495635_0037485 | |||
| 320 | Ga0495657_0001472 | |||
| 321 | Ga0495657_0002508 | |||
| 322 | Ga0495604_0074882 | |||
| 323 | Ga0495674_0018648 | |||
| 324 | Ga0495676_0066995 | |||
| 325 | Ga0495680_0003919 | |||
| 326 | Ga0495680_0026868 | |||
| 327 | Ga0495684_0194863 | |||
| 328 | Ga0496102_0029367 | |||
| 329 | Ga0496102_0061657 | |||
| 330 | Ga0496103_0187055 | |||
| 331 | Ga0496104_0012115 | |||
| 332 | Ga0496105_0006501 | |||
| 333 | Ga0496108_0049070 | |||
| 334 | Ga0496109_0001375 | |||
| 335 | Ga0496110_0005932 | |||
| 336 | Ga0496111_0007035 | |||
| 337 | Ga0496112_0009659 | |||
| 338 | Ga0496113_0000087 | |||
| 339 | Ga0496121_0007300 | |||
| 340 | Ga0501031_0000532 | |||
| 341 | Ga0501031_0033623 | |||
| 342 | Ga0501032_0018418 | |||
| 343 | Ga0501033_0000987 | |||
| 344 | Ga0501034_0000553 | |||
| 345 | Ga0501036_0000681 | |||
| 346 | Ga0501036_0006748 | |||
| 347 | Ga0501036_0021819 | |||
| 348 | Ga0501036_0030266 | |||
| 349 | Ga0501036_0068883 | |||
| 350 | Ga0501036_0101622 | |||
| 351 | Ga0501036_0170811 | |||
| 352 | Ga0501037_0001001 | |||
| 353 | Ga0501037_0044737 | |||
| 354 | Ga0501038_0001029 | |||
| 355 | Ga0501038_0034729 | |||
| 356 | Ga0501038_0074111 | |||
| 357 | Ga0501039_0007217 | |||
| 358 | Ga0501039_0012530 | |||
| 359 | Ga0501039_0045976 | |||
| 360 | Ga0501039_0055468 | |||
| 361 | Ga0501040_0001264 | |||
| 362 | Ga0501040_0007554 | |||
| 363 | Ga0501040_0031706 | |||
| 364 | Ga0501040_0082513 | |||
| 365 | Ga0501040_0131248 | |||
| 366 | Ga0501041_0000640 | |||
| 367 | Ga0501041_0005438 | |||
| 368 | Ga0501041_0027231 | |||
| 369 | Ga0501041_0033494 | |||
| 370 | Ga0501042_0014330 | |||
| 371 | Ga0501042_0017270 | |||
| 372 | Ga0501042_0099921 | |||
| 373 | Ga0501042_0114167 | |||
| 374 | Ga0501043_0000750 | |||
| 375 | Ga0501043_0001646 | |||
| 376 | Ga0501043_0081547 | |||
| 377 | Ga0501046_0000475 | |||
| 378 | Ga0501046_0010062 | |||
| 379 | Ga0501046_0043455 | |||
| 380 | Ga0501046_0056997 | |||
| 381 | Ga0501046_0262556 | |||
| 382 | Ga0501047_0000004 | |||
| 383 | Ga0501047_0001366 | |||
| 384 | Ga0501048_0000881 | |||
| 385 | Ga0501048_0028673 | |||
| 386 | Ga0501048_0054563 | |||
| 387 | Ga0501048_0076354 | |||
| 388 | Ga0501048_0142866 | |||
| 389 | Ga0501068_0000481 | |||
| 390 | Ga0501068_0007001 | |||
| 391 | Ga0501068_0027021 | |||
| 392 | Ga0501068_0210847 | |||
| 393 | Ga0501069_0005364 | |||
| 394 | Ga0501069_0032130 | |||
| 395 | Ga0501070_0002558 | |||
| 396 | Ga0501070_0020668 | |||
| 397 | Ga0501070_0067455 | |||
| 398 | Ga0501071_0001196 | |||
| 399 | Ga0501071_0013499 | |||
| 400 | Ga0501071_0058018 | |||
| 401 | Ga0501072_0000365 | |||
| 402 | Ga0501072_0001214 | |||
| 403 | Ga0501072_0012436 | |||
| 404 | Ga0501072_0015318 | |||
| 405 | Ga0501072_0017234 | |||
| 406 | Ga0501072_0050754 | |||
| 407 | Ga0501072_0118948 | |||
| 408 | Ga0501072_0148425 | |||
| 409 | Ga0501073_0002069 | |||
| 410 | Ga0501073_0030858 | |||
| 411 | Ga0501074_0000505 | |||
| 412 | Ga0501074_0010434 | |||
| 413 | Ga0501074_0020967 | |||
| 414 | Ga0501074_0027435 | |||
| 415 | Ga0501075_0000445 | |||
| 416 | Ga0501075_0021817 | |||
| 417 | Ga0501075_0034288 | |||
| 418 | Ga0501075_0060516 | |||
| 419 | Ga0501075_0065909 | |||
| 420 | Ga0501075_0167509 | |||
| 421 | Ga0501076_0000349 | |||
| 422 | Ga0501076_0000974 | |||
| 423 | Ga0501076_0006044 | |||
| 424 | Ga0501076_0014932 | |||
| 425 | Ga0501076_0131880 | |||
| 426 | Ga0501076_0144445 | |||
| 427 | Ga0501077_0000802 | |||
| 428 | Ga0501077_0002667 | |||
| 429 | Ga0501077_0010423 | |||
| 430 | Ga0501077_0019901 | |||
| 431 | Ga0501077_0040350 | |||
| 432 | Ga0501077_0054603 | |||
| 433 | Ga0501077_0065318 | |||
| 434 | Ga0501079_0000646 | |||
| 435 | Ga0501079_0004897 | |||
| 436 | Ga0501079_0010359 | |||
| 437 | Ga0501079_0020499 | |||
| 438 | Ga0501079_0057839 | |||
| 439 | Ga0501079_0183516 | |||
| 440 | Ga0501080_0001159 | |||
| 441 | Ga0501080_0025129 | |||
| 442 | Ga0501080_0064541 | |||
| 443 | Ga0501080_0123599 | |||
| 444 | Ga0501081_0000511 | |||
| 445 | Ga0501081_0040294 | |||
| 446 | Ga0501081_0056498 | |||
| 447 | Ga0501081_0092561 | |||
| 448 | Ga0501081_0129533 | |||
| 449 | Ga0501083_0000230 | |||
| 450 | Ga0501083_0005037 | |||
| 451 | Ga0501035_0000561 | |||
| 452 | Ga0501035_0112919 | |||
| 453 | Ga0501044_0012130 | |||
| 454 | Ga0501045_0000699 | |||
| 455 | Ga0501045_0003210 | |||
| 456 | Ga0501045_0003863 | |||
| 457 | Ga0501045_0054081 | |||
| 458 | Ga0501045_0104512 | |||
| 459 | nmdc:mga05p37_4151_c1 | |||
| 460 | nmdc:mga05p37_8636_c1 | |||
| 461 | nmdc:mga08y16_24388_c1 | |||
| 462 | nmdc:mga0rr50_121985_c1 | |||
| 463 | Ga0495595_0021844 | |||
| 464 | Ga0495619_0004253 | |||
| 465 | Ga0495619_0067982 | |||
| 466 | Ga0501084_0000001 | |||
| 467 | Ga0501084_0000557 | |||
| 468 | Ga0501084_0007508 | |||
| 469 | Ga0590075_018580 | |||
| 470 | Ga0501082_0001026 | |||
| 471 | Ga0501082_0015048 | |||
| 472 | Ga0501082_0018819 | |||
| 473 | Ga0501082_0035359 | |||
| 474 | Ga0501082_0098151 | |||
| 475 | Ga0501082_0269356 | |||
| 476 | Ga0530510_0000499 | |||
| 477 | Ga0530510_0002752 | |||
| 478 | Ga0530510_0008359 | |||
| 479 | Ga0530510_0020284 | |||
| 480 | Ga0530510_0089734 | |||
| 481 | Ga0530510_0151456 | |||
| 482 | Ga0530510_0187585 | |||
| 483 | 2883293590 | |||
| 484 | 2939600807 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1dd2-assembly1.cif.gz_A | biotin carboxyl carrier domain of transcarboxylase (tc 1.3s) | 0.9494 | 16 | 49 |
| 5gu9-assembly1.cif.gz_A | structure of biotin carboxyl carrier protein from pyrococcus horikoshi ot3 (delta n79) a138i mutant | 0.9447 | 16 | 49 |
| 3rnm-assembly1.cif.gz_E | the crystal structure of the subunit binding of human dihydrolipoamide transacylase (e2b) bound to human dihydrolipoamide dehydrogenase (e3) | 0.9367 | 82 | 122 |
| 2d5d-assembly1.cif.gz_A | structure of biotin carboxyl carrier protein (74val start) from pyrococcus horikoshi ot3 ligand free form ii | 0.9366 | 16 | 49 |
| 2ejg-assembly1.cif.gz_C | crystal structure of the biotin protein ligase (mutation r48a) and biotin carboxyl carrier protein complex from pyrococcus horikoshii ot3 | 0.9362 | 16 | 49 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q8IJJ4_178_282_2.40.50.100 | Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.9639 | 16 | 49 | 2.40.50.100 |
| af_P96890_525_598_2.40.50.100 | Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.9376 | 16 | 49 | 2.40.50.100 |
| 3rnmE00 | Few Secondary Structures;Irregular;Dihydrolipoamide Transferase;E3-binding domain | 0.9368 | 82 | 122 | 4.10.320.10 |
| 1w88J00 | Few Secondary Structures;Irregular;Dihydrolipoamide Transferase;E3-binding domain | 0.9364 | 80 | 117 | 4.10.320.10 |
| 2d5dB00 | Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.9359 | 16 | 49 | 2.40.50.100 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3A0AJA4-F1-model_v4 | 2-oxoacid dehydrogenase acyltransferase catalytic domain-containing protein | 0.978 | 200 | 352 |
GO:0005737
GO:0016407 GO:0031405 |
| AF-A0A656IQR0-F1-model_v4 | deleted | 0.9691 | 186 | 348 |
|
| AF-A0A833G887-F1-model_v4 | 2-oxo acid dehydrogenase subunit E2 | 0.9687 | 199 | 351 |
GO:0005737
GO:0016407 GO:0031405 |
| AF-A0A7D7VVG5-F1-model_v4 | deleted | 0.9663 | 144 | 351 |
|
| AF-A0A1I4BWZ4-F1-model_v4 | Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component | 0.9639 | 148 | 351 |
GO:0005737
GO:0016407 GO:0031405 |