F354616

General Info

Members Datasets Scaffolds Average Seq Length
242 156 484 259

Family's Representative Sequence

Representative Sequence 3300009148|Ga0105243_10133264|Ga0105243_101332642
Length 286
Sequence MSKIGLLTVTQQEARMTLATLQPTRTSTRRLSSRTIRRFGWIPDLPDQRDIIYAAPAPILASLPSSTDLRPACPAVYDQGTLGSCTANAIAGALEFDQMKQGASDVFVPSRLFIYYNERAIEGSVDDDAGAMIRDGIKSVAQLGAPHESAWPYVVGKFRAKPPAKAFADAATHQALLYQRLRLRIDQLRGCLASGFPVVFGFTVYQSFVSQTVAKTGRVPLPTAGESPIGGHAVLAVGYDDARAWFIVRNSWGPAWGMRGYFTMPYDYVLDPDLCDDFWTIRSVEV

Samples

Sample ID Description Type Environment
1 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
14 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
24 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
25 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
26 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
27 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
28 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
36 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
37 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
40 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
41 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
42 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
43 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
44 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
45 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
49 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
50 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
51 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
52 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
53 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
54 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
55 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
56 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
57 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
59 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
60 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
61 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
62 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
64 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
65 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
66 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
67 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
70 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
71 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
72 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
73 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
74 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
75 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
76 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
77 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
78 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
79 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
80 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
81 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
82 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
83 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
116 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
117 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
118 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
119 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
120 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
121 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
122 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
123 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
124 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
125 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
126 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
127 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
128 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
129 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
130 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
131 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
132 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
133 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
134 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
135 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
136 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
137 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
138 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
139 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
140 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
141 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
142 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
143 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
144 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
145 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
146 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
147 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
148 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
149 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
150 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
151 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
152 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
153 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
154 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
155 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
156 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.69
Metatranscriptomes 2.48
Isolates 0.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.61
Nodule 0
Rhizoplane 4.55
Rhizosphere 88.43
Stem 0
Stem Tuber 0
Unclassified 7.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105243_10133264 3300009148 Bacteria 2111
2 JGI25406J46586_10014427 3300003203 Bacteria 3360
3 rootL2_10002280 3300003322 Bacteria 3008
4 Ga0065715_10163057 3300005293 Bacteria 1611
5 Ga0065715_10316121 3300005293 Bacteria 1011
6 Ga0070658_10089121 3300005327 Bacteria 2540
7 Ga0070683_100017279 3300005329 Bacteria 6375
8 Ga0070683_100091847 3300005329 Bacteria 2851
9 Ga0070683_100282535 3300005329 Bacteria 1579
10 Ga0070690_100009218 3300005330 Bacteria 5711
11 Ga0070690_100212112 3300005330 Bacteria 1353
12 Ga0070670_100192734 3300005331 Bacteria 1771
13 Ga0068869_100178680 3300005334 Bacteria 1663
14 Ga0070666_10024367 3300005335 Bacteria 3941
15 Ga0070680_100023076 3300005336 Bacteria 4959
16 Ga0070680_100119582 3300005336 Bacteria 2198
17 Ga0070680_100126350 3300005336 Bacteria 2136
18 Ga0070680_100136420 3300005336 Bacteria 2056
19 Ga0070680_100163518 3300005336 Bacteria 1871
20 Ga0070680_100698237 3300005336 Bacteria 873
21 Ga0070660_100032576 3300005339 Bacteria 3923
22 Ga0070691_10012337 3300005341 Bacteria 3913
23 Ga0070687_100102696 3300005343 Bacteria 1604
24 Ga0070687_100286793 3300005343 Bacteria 1039
25 Ga0070661_100036938 3300005344 Bacteria 3552
26 Ga0070661_100056805 3300005344 Bacteria 2868
27 Ga0070661_100522582 3300005344 Bacteria 952
28 Ga0070668_100031034 3300005347 Bacteria 4066
29 Ga0070668_100088561 3300005347 Bacteria 2437
30 Ga0070675_100145960 3300005354 Bacteria 2026
31 Ga0070671_100111553 3300005355 Bacteria 2297
32 Ga0070673_100067796 3300005364 Bacteria 2854
33 Ga0070688_100385472 3300005365 Bacteria 1034
34 Ga0070714_100077388 3300005435 Bacteria 2889
35 Ga0070714_100183465 3300005435 Bacteria 1905
36 Ga0070713_100202925 3300005436 Bacteria 1791
37 Ga0070710_10231074 3300005437 Bacteria 1181
38 Ga0070711_100023082 3300005439 Bacteria 4041
39 Ga0070705_100033196 3300005440 Unclassified 2875
40 Ga0070700_100030457 3300005441 Bacteria 3225
41 Ga0070708_100316263 3300005445 Bacteria 1471
42 Ga0070663_100042439 3300005455 Bacteria 3196
43 Ga0070662_100060327 3300005457 Bacteria 2765
44 Ga0070681_10025668 3300005458 Bacteria 5927
45 Ga0070681_10152351 3300005458 Bacteria 2238
46 Ga0070681_10221853 3300005458 Bacteria 1805
47 Ga0070681_10327889 3300005458 Bacteria 1440
48 Ga0070707_100059024 3300005468 Bacteria 3680
49 Ga0070699_100009406 3300005518 Bacteria 8465
50 Ga0070679_100033367 3300005530 Bacteria 5097
51 Ga0070679_100042569 3300005530 Bacteria 4523
52 Ga0070679_100069320 3300005530 Bacteria 3517
53 Ga0070679_100086564 3300005530 Bacteria 3120
54 Ga0070684_100004352 3300005535 Bacteria 10762
55 Ga0070684_100386279 3300005535 Bacteria 1290
56 Ga0070684_100492468 3300005535 Unclassified 1135
57 Ga0070672_100005123 3300005543 Bacteria 8646
58 Ga0070686_100000267 3300005544 Bacteria 35636
59 Ga0070686_100043274 3300005544 Bacteria 2825
60 Ga0070695_100115965 3300005545 Bacteria 1825
61 Ga0068855_100014094 3300005563 Bacteria 9633
62 Ga0068857_100191320 3300005577 Bacteria 1864
63 Ga0068854_100012932 3300005578 Bacteria 5466
64 Ga0068854_100189768 3300005578 Bacteria 1610
65 Ga0068856_100056241 3300005614 Bacteria 3882
66 Ga0068856_100222340 3300005614 Bacteria 1903
67 Ga0068856_100545881 3300005614 Bacteria 1180
68 Ga0070702_100162344 3300005615 Bacteria 1445
69 Ga0068852_100073265 3300005616 Bacteria 3012
70 Ga0068859_100023846 3300005617 Bacteria 6142
71 Ga0068859_100471718 3300005617 Bacteria 1350
72 Ga0068859_100512610 3300005617 Bacteria 1294
73 Ga0068861_100086680 3300005719 Unclassified 2462
74 Ga0068863_100180069 3300005841 Bacteria 2029
75 Ga0068863_100867151 3300005841 Bacteria 902
76 Ga0068858_100048773 3300005842 Bacteria 3922
77 Ga0068858_100508713 3300005842 Unclassified 1164
78 Ga0081540_1003627 3300005983 Bacteria 12113
79 Ga0081539_10000033 3300005985 Bacteria 309306
80 Ga0075365_10049259 3300006038 Bacteria 2775
81 Ga0075365_10050402 3300006038 Bacteria 2746
82 Ga0075368_10004019 3300006042 Bacteria 4953
83 Ga0075364_10009849 3300006051 Bacteria 5748
84 Ga0075364_10047957 3300006051 Bacteria 2783
85 Ga0070716_100205354 3300006173 Bacteria 1313
86 Ga0070712_100008517 3300006175 Bacteria 6453
87 Ga0070712_100267519 3300006175 Bacteria 1372
88 Ga0075367_10006986 3300006178 Bacteria 5749
89 Ga0075366_10005975 3300006195 Bacteria 6627
90 Ga0075366_10085257 3300006195 Bacteria 1889
91 Ga0097621_100120628 3300006237 Bacteria 2224
92 Ga0075370_10046459 3300006353 Bacteria 2457
93 Ga0068871_100188151 3300006358 Bacteria 1777
94 Ga0068871_100349856 3300006358 Unclassified 1307
95 Ga0075434_100773167 3300006871 Bacteria 977
96 Ga0068865_100076012 3300006881 Bacteria 2396
97 Ga0097620_100023846 3300006931 Bacteria 6142
98 Ga0097620_100471701 3300006931 Bacteria 1350
99 Ga0097620_100512608 3300006931 Bacteria 1294
100 Ga0075435_100134091 3300007076 Bacteria 2073
101 Ga0075435_100190239 3300007076 Bacteria 1737
102 Ga0099794_10000010 3300007265 Bacteria 90057
103 Ga0099794_10004926 3300007265 Bacteria 5308
104 Ga0105240_10142107 3300009093 Bacteria 2869
105 Ga0105240_10219981 3300009093 Bacteria 2213
106 Ga0105240_10362391 3300009093 Bacteria 1641
107 Ga0105242_10120900 3300009176 Bacteria 2247
108 Ga0105248_10197566 3300009177 Bacteria 2266
109 Ga0105248_10385648 3300009177 Bacteria 1578
110 Ga0105238_10005235 3300009551 Bacteria 12819
111 Ga0105238_10172830 3300009551 Unclassified 2137
112 Ga0105249_10000182 3300009553 Bacteria 73467
113 Ga0105249_10343884 3300009553 Bacteria 1509
114 Ga0105249_10763320 3300009553 Bacteria 1029
115 Ga0105239_10192585 3300010375 Bacteria 2282
116 Ga0157371_10036182 3300013102 Bacteria 3535
117 Ga0157370_10033608 3300013104 Bacteria 5000
118 Ga0157370_10053875 3300013104 Bacteria 3835
119 Ga0157370_10282447 3300013104 Bacteria 1534
120 Ga0157369_10013168 3300013105 Bacteria 9360
121 Ga0157369_10048689 3300013105 Bacteria 4598
122 Ga0157369_10049172 3300013105 Bacteria 4572
123 Ga0157369_10151185 3300013105 Bacteria 2453
124 Ga0157372_10036811 3300013307 Bacteria 5396
125 Ga0157372_10051378 3300013307 Unclassified 4588
126 Ga0157372_10152945 3300013307 Bacteria 2664
127 Ga0163163_10000294 3300014325 Bacteria 49809
128 Ga0163163_10583572 3300014325 Bacteria 1181
129 Ga0157379_10002467 3300014968 Bacteria 15485
130 Ga0157376_10047537 3300014969 Bacteria 3543
131 Ga0157376_10103526 3300014969 Unclassified 2493
132 Ga0197907_10553529 3300020069 Bacteria 1121
133 Ga0206356_10717437 3300020070 Bacteria 1886
134 Ga0206356_11774420 3300020070 Bacteria 1486
135 Ga0206351_10009552 3300020077 Bacteria 1008
136 Ga0206353_11648435 3300020082 Bacteria 1560
137 Ga0224712_10082540 3300022467 Bacteria 1330
138 Ga0207680_10032528 3300025903 Bacteria 2966
139 Ga0207680_10052602 3300025903 Bacteria 2441
140 Ga0207699_10071580 3300025906 Bacteria 2121
141 Ga0207705_10072166 3300025909 Bacteria 2503
142 Ga0207684_10468412 3300025910 Unclassified 1081
143 Ga0207707_10020020 3300025912 Bacteria 5838
144 Ga0207707_10021304 3300025912 Bacteria 5666
145 Ga0207707_10025391 3300025912 Bacteria 5184
146 Ga0207707_10101057 3300025912 Bacteria 2520
147 Ga0207695_10114471 3300025913 Bacteria 2672
148 Ga0207695_10277415 3300025913 Bacteria 1570
149 Ga0207693_10001446 3300025915 Bacteria 21017
150 Ga0207660_10126449 3300025917 Bacteria 1941
151 Ga0207660_10206683 3300025917 Bacteria 1536
152 Ga0207662_10002292 3300025918 Bacteria 9584
153 Ga0207662_10133486 3300025918 Bacteria 1567
154 Ga0207657_10005220 3300025919 Bacteria 13608
155 Ga0207649_10059393 3300025920 Bacteria 2399
156 Ga0207649_10140366 3300025920 Bacteria 1652
157 Ga0207652_10013592 3300025921 Bacteria 6583
158 Ga0207652_10093257 3300025921 Bacteria 2649
159 Ga0207652_10169857 3300025921 Bacteria 1956
160 Ga0207652_10265354 3300025921 Bacteria 1549
161 Ga0207646_10348380 3300025922 Unclassified 1338
162 Ga0207650_10270417 3300025925 Unclassified 1381
163 Ga0207700_10199626 3300025928 Bacteria 1685
164 Ga0207704_10051075 3300025938 Bacteria 2498
165 Ga0207665_10227266 3300025939 Bacteria 1370
166 Ga0207691_10298125 3300025940 Bacteria 1385
167 Ga0207711_10056971 3300025941 Bacteria 3359
168 Ga0207711_10470683 3300025941 Bacteria 1170
169 Ga0207661_10015201 3300025944 Bacteria 5660
170 Ga0207661_10040448 3300025944 Bacteria 3664
171 Ga0207661_10674404 3300025944 Bacteria 950
172 Ga0207679_10614479 3300025945 Bacteria 981
173 Ga0207667_10234832 3300025949 Bacteria 1877
174 Ga0207712_10000063 3300025961 Bacteria 133704
175 Ga0207668_10001620 3300025972 Bacteria 13148
176 Ga0207703_10083067 3300026035 Bacteria 2675
177 Ga0207703_10735091 3300026035 Bacteria 940
178 Ga0207639_10013386 3300026041 Bacteria 5742
179 Ga0207678_10026722 3300026067 Bacteria 5035
180 Ga0207674_10174292 3300026116 Bacteria 2103
181 Ga0207675_100047303 3300026118 Bacteria 4017
182 Ga0207675_100184158 3300026118 Bacteria 2001
183 Ga0207683_10173353 3300026121 Bacteria 1954
184 Ga0207698_10050916 3300026142 Bacteria 3163
185 Ga0207698_10112325 3300026142 Unclassified 2287
186 Ga0207698_10166569 3300026142 Bacteria 1935
187 Ga0207698_10269939 3300026142 Bacteria 1568
188 Ga0207698_10463407 3300026142 Bacteria 1226
189 Ga0209588_1000008 3300027671 Bacteria 177025
190 Ga0209813_10057080 3300027866 Unclassified 1237
191 Ga0265319_1000696 3300028563 Bacteria 21914
192 Ga0265318_10003471 3300028577 Bacteria 7907
193 Ga0265323_10030516 3300028653 Bacteria 2007
194 Ga0265322_10000651 3300028654 Bacteria 13030
195 Ga0265322_10014181 3300028654 Unclassified 2304
196 Ga0265338_10005490 3300028800 Bacteria 16527
197 Ga0265314_10061730 3300031711 Bacteria 2550
198 Ga0373946_0026249 3300035171 Bacteria 2296
199 Ga0373935_0002296 3300035692 Bacteria 10895
200 Ga0373947_0009675 3300035725 Bacteria 5533
201 Ga0373947_0044683 3300035725 Bacteria 2649
202 Ga0373925_0005096 3300037068 Bacteria 9838
203 Ga0439444_0029652 3300042437 Bacteria 1020
204 Ga0451577_0002665 3300042876 Bacteria 20860
205 Ga0451577_0130584 3300042876 Bacteria 2253
206 Ga0466965_0078363 3300044683 Bacteria 1669
207 Ga0466966_0104389 3300044684 Bacteria 1751
208 Ga0453684_0003658 3300044712 Bacteria 34143
209 Ga0453684_0003751 3300044712 Bacteria 33596
210 Ga0466967_0383297 3300045976 Bacteria 1365
211 Ga0466967_0881844 3300045976 Bacteria 889
212 Ga0495580_0005403 3300046472 Bacteria 10564
213 Ga0495635_0095792 3300046663 Unclassified 2029
214 Ga0495599_0351721 3300046678 Bacteria 883
215 Ga0496104_0298006 3300048907 Bacteria 1525
216 Ga0496104_0530799 3300048907 Bacteria 1088
217 Ga0496105_0084616 3300048908 Bacteria 2620
218 Ga0496105_0547098 3300048908 Bacteria 904
219 Ga0496106_0122253 3300048909 Bacteria 2036
220 Ga0496106_0390122 3300048909 Bacteria 1119
221 Ga0496109_0952947 3300048912 Bacteria 796
222 Ga0496110_0194665 3300048913 Unclassified 1841
223 Ga0496112_0346495 3300048915 Bacteria 1428
224 Ga0496113_0185313 3300048916 Bacteria 1651
225 Ga0496114_0006492 3300048917 Bacteria 9215
226 Ga0501070_0093542 3300049586 Bacteria 2487
227 Ga0501074_0454618 3300049590 Bacteria 908
228 Ga0501083_0023364 3300049744 Bacteria 4288
229 nmdc:mga03683_9700_c1 3300050489 Bacteria 2635
230 nmdc:mga00v17_32275_c1 3300050491 Bacteria 3095
231 nmdc:mga0yw44_247335_c1 3300050492 Bacteria 1186
232 nmdc:mga0yw44_60272_c1 3300050492 Bacteria 2324
233 nmdc:mga0k408_115673_c1 3300050493 Bacteria 1587
234 nmdc:mga04h51_16142_c1 3300050495 Bacteria 2164
235 nmdc:mga0n895_91347_c1 3300050512 Bacteria 3047
236 nmdc:mga0rr50_116988_c1 3300050513 Bacteria 2117
237 nmdc:mga0rr50_177138_c1 3300050513 Bacteria 1741
238 nmdc:mga0rr50_183789_c1 3300050513 Bacteria 1710
239 Ga0495619_0258052 3300053085 Unclassified 1208
240 Ga0501082_0293625 3300060353 Bacteria 1415
241 8004023886 8004021418 Bacteria 4313954
242 8004027047 8004025490 Bacteria 4327753
243 Ga0105243_10133264
244 JGI25406J46586_10014427
245 rootL2_10002280
246 Ga0065715_10163057
247 Ga0065715_10316121
248 Ga0070658_10089121
249 Ga0070683_100017279
250 Ga0070683_100091847
251 Ga0070683_100282535
252 Ga0070690_100009218
253 Ga0070690_100212112
254 Ga0070670_100192734
255 Ga0068869_100178680
256 Ga0070666_10024367
257 Ga0070680_100023076
258 Ga0070680_100119582
259 Ga0070680_100126350
260 Ga0070680_100136420
261 Ga0070680_100163518
262 Ga0070680_100698237
263 Ga0070660_100032576
264 Ga0070691_10012337
265 Ga0070687_100102696
266 Ga0070687_100286793
267 Ga0070661_100036938
268 Ga0070661_100056805
269 Ga0070661_100522582
270 Ga0070668_100031034
271 Ga0070668_100088561
272 Ga0070675_100145960
273 Ga0070671_100111553
274 Ga0070673_100067796
275 Ga0070688_100385472
276 Ga0070714_100077388
277 Ga0070714_100183465
278 Ga0070713_100202925
279 Ga0070710_10231074
280 Ga0070711_100023082
281 Ga0070705_100033196
282 Ga0070700_100030457
283 Ga0070708_100316263
284 Ga0070663_100042439
285 Ga0070662_100060327
286 Ga0070681_10025668
287 Ga0070681_10152351
288 Ga0070681_10221853
289 Ga0070681_10327889
290 Ga0070707_100059024
291 Ga0070699_100009406
292 Ga0070679_100033367
293 Ga0070679_100042569
294 Ga0070679_100069320
295 Ga0070679_100086564
296 Ga0070684_100004352
297 Ga0070684_100386279
298 Ga0070684_100492468
299 Ga0070672_100005123
300 Ga0070686_100000267
301 Ga0070686_100043274
302 Ga0070695_100115965
303 Ga0068855_100014094
304 Ga0068857_100191320
305 Ga0068854_100012932
306 Ga0068854_100189768
307 Ga0068856_100056241
308 Ga0068856_100222340
309 Ga0068856_100545881
310 Ga0070702_100162344
311 Ga0068852_100073265
312 Ga0068859_100023846
313 Ga0068859_100471718
314 Ga0068859_100512610
315 Ga0068861_100086680
316 Ga0068863_100180069
317 Ga0068863_100867151
318 Ga0068858_100048773
319 Ga0068858_100508713
320 Ga0081540_1003627
321 Ga0081539_10000033
322 Ga0075365_10049259
323 Ga0075365_10050402
324 Ga0075368_10004019
325 Ga0075364_10009849
326 Ga0075364_10047957
327 Ga0070716_100205354
328 Ga0070712_100008517
329 Ga0070712_100267519
330 Ga0075367_10006986
331 Ga0075366_10005975
332 Ga0075366_10085257
333 Ga0097621_100120628
334 Ga0075370_10046459
335 Ga0068871_100188151
336 Ga0068871_100349856
337 Ga0075434_100773167
338 Ga0068865_100076012
339 Ga0097620_100023846
340 Ga0097620_100471701
341 Ga0097620_100512608
342 Ga0075435_100134091
343 Ga0075435_100190239
344 Ga0099794_10000010
345 Ga0099794_10004926
346 Ga0105240_10142107
347 Ga0105240_10219981
348 Ga0105240_10362391
349 Ga0105242_10120900
350 Ga0105248_10197566
351 Ga0105248_10385648
352 Ga0105238_10005235
353 Ga0105238_10172830
354 Ga0105249_10000182
355 Ga0105249_10343884
356 Ga0105249_10763320
357 Ga0105239_10192585
358 Ga0157371_10036182
359 Ga0157370_10033608
360 Ga0157370_10053875
361 Ga0157370_10282447
362 Ga0157369_10013168
363 Ga0157369_10048689
364 Ga0157369_10049172
365 Ga0157369_10151185
366 Ga0157372_10036811
367 Ga0157372_10051378
368 Ga0157372_10152945
369 Ga0163163_10000294
370 Ga0163163_10583572
371 Ga0157379_10002467
372 Ga0157376_10047537
373 Ga0157376_10103526
374 Ga0197907_10553529
375 Ga0206356_10717437
376 Ga0206356_11774420
377 Ga0206351_10009552
378 Ga0206353_11648435
379 Ga0224712_10082540
380 Ga0207680_10032528
381 Ga0207680_10052602
382 Ga0207699_10071580
383 Ga0207705_10072166
384 Ga0207684_10468412
385 Ga0207707_10020020
386 Ga0207707_10021304
387 Ga0207707_10025391
388 Ga0207707_10101057
389 Ga0207695_10114471
390 Ga0207695_10277415
391 Ga0207693_10001446
392 Ga0207660_10126449
393 Ga0207660_10206683
394 Ga0207662_10002292
395 Ga0207662_10133486
396 Ga0207657_10005220
397 Ga0207649_10059393
398 Ga0207649_10140366
399 Ga0207652_10013592
400 Ga0207652_10093257
401 Ga0207652_10169857
402 Ga0207652_10265354
403 Ga0207646_10348380
404 Ga0207650_10270417
405 Ga0207700_10199626
406 Ga0207704_10051075
407 Ga0207665_10227266
408 Ga0207691_10298125
409 Ga0207711_10056971
410 Ga0207711_10470683
411 Ga0207661_10015201
412 Ga0207661_10040448
413 Ga0207661_10674404
414 Ga0207679_10614479
415 Ga0207667_10234832
416 Ga0207712_10000063
417 Ga0207668_10001620
418 Ga0207703_10083067
419 Ga0207703_10735091
420 Ga0207639_10013386
421 Ga0207678_10026722
422 Ga0207674_10174292
423 Ga0207675_100047303
424 Ga0207675_100184158
425 Ga0207683_10173353
426 Ga0207698_10050916
427 Ga0207698_10112325
428 Ga0207698_10166569
429 Ga0207698_10269939
430 Ga0207698_10463407
431 Ga0209588_1000008
432 Ga0209813_10057080
433 Ga0265319_1000696
434 Ga0265318_10003471
435 Ga0265323_10030516
436 Ga0265322_10000651
437 Ga0265322_10014181
438 Ga0265338_10005490
439 Ga0265314_10061730
440 Ga0373946_0026249
441 Ga0373935_0002296
442 Ga0373947_0009675
443 Ga0373947_0044683
444 Ga0373925_0005096
445 Ga0439444_0029652
446 Ga0451577_0002665
447 Ga0451577_0130584
448 Ga0466965_0078363
449 Ga0466966_0104389
450 Ga0453684_0003658
451 Ga0453684_0003751
452 Ga0466967_0383297
453 Ga0466967_0881844
454 Ga0495580_0005403
455 Ga0495635_0095792
456 Ga0495599_0351721
457 Ga0496104_0298006
458 Ga0496104_0530799
459 Ga0496105_0084616
460 Ga0496105_0547098
461 Ga0496106_0122253
462 Ga0496106_0390122
463 Ga0496109_0952947
464 Ga0496110_0194665
465 Ga0496112_0346495
466 Ga0496113_0185313
467 Ga0496114_0006492
468 Ga0501070_0093542
469 Ga0501074_0454618
470 Ga0501083_0023364
471 nmdc:mga03683_9700_c1
472 nmdc:mga00v17_32275_c1
473 nmdc:mga0yw44_247335_c1
474 nmdc:mga0yw44_60272_c1
475 nmdc:mga0k408_115673_c1
476 nmdc:mga04h51_16142_c1
477 nmdc:mga0n895_91347_c1
478 nmdc:mga0rr50_116988_c1
479 nmdc:mga0rr50_177138_c1
480 nmdc:mga0rr50_183789_c1
481 Ga0495619_0258052
482 Ga0501082_0293625
483 8004023886
484 8004027047

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00112

Peptidase_C1

Papain family cysteine protease

63

272

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ois-assembly1.cif.gz_A crystal structure xylellain, a cysteine protease from xylella fastidiosa 0.9356 11 268
4qrv-assembly1.cif.gz_A crystal structure of i86f mutant of papain 0.8182 42 266
4i04-assembly1.cif.gz_A structure of zymogen of cathepsin b1 from schistosoma mansoni 0.8123 17 248
7pk4-assembly1.cif.gz_A tick salivary cystatin ricistatin in complex with cathepsin v 0.8112 42 262
2vhs-assembly1.cif.gz_D cathsilicatein, a chimera 0.8105 44 262
ID Description Score Start End Superfamily
3oisC00 Alpha Beta;Alpha-Beta Complex;Cathepsin B; Chain A;Cysteine proteinases 0.9392 11 268 3.90.70.10
4oelB00 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Cysteine proteinases. Chain C 0.9358 228 248 2.40.50.170
af_A0A0R0KWV5_150_228_2.40.50.170 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Cysteine proteinases. Chain C 0.9275 228 247 2.40.50.170
3oisC00 Alpha Beta;Alpha-Beta Complex;Cathepsin B; Chain A;Cysteine proteinases 0.9049 11 268 3.90.70.10
3qt4A00 Alpha Beta;Alpha-Beta Complex;Cathepsin B; Chain A;Cysteine proteinases 0.8225 17 262 3.90.70.10
ID Description Score Start End GO Terms
AF-A0A812U2C5-F1-model_v4 Peptidase C1A papain C-terminal domain-containing protein 0.9929 160 264 GO:0006508
GO:0008234
AF-A0A535H0A3-F1-model_v4 Peptidase 0.9902 42 268 GO:0006508
GO:0008234
AF-A0A3B8XGG8-F1-model_v4 Peptidase 0.9901 156 268 GO:0006508
GO:0008234
AF-A0A3B9MAM4-F1-model_v4 Peptidase 0.9888 94 268 GO:0006508
GO:0008234
AF-A0A538AF61-F1-model_v4 Peptidase 0.9875 32 268 GO:0006508
GO:0008234

Map