F354115

General Info

Members Datasets Scaffolds Average Seq Length
241 196 482 280

Family's Representative Sequence

Representative Sequence 3300049569|Ga0501032_0012290|Ga0501032_0012290_2145_3056
Length 303
Sequence VFAVGVARSGRGEARSGAVAERETAGRLVELLSDHDGTLADTWVGTVARTLKGRVTRAELSAELNELFTAITEALHGGTLDARSENFSEVRALLAELSRNRARQGFTPSETAVSVFALKEVLEPTLTGGESADVAAYLALSRVLDALGLFTIETYARTREEIITTQAEQLLELSTPVVKLWDGVVAVPLVGTLDSARTQVVMEKLLQALVDTESDQAIIDITGVPAVDTQVAQHLLKTIVAARLMGAECTVSGIRPQIAQTIVALGIEFGDITTKATLADALRHAMARINAGREAAGTRGAAR

Samples

Sample ID Description Type Environment
1 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
53 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
54 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
81 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
82 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
83 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
84 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
87 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
88 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
89 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
90 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
91 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
92 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
93 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
94 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
95 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
96 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
97 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
98 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
99 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
100 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
101 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
102 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
103 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
104 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
105 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
106 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
107 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
108 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
109 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
110 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
111 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
112 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
113 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
114 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
115 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
116 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
117 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
118 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
119 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
120 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
121 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
122 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
131 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
132 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
133 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
136 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
137 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
138 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
139 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
140 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
141 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
142 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
143 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
144 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
145 2501939600 Micromonospora sp. L5 Isolate Unclassified
146 2508501039 Frankia saprophytica CN3 Isolate Nodule
147 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
148 2626541554 Frankia sp. AvcI.1 Isolate Nodule
149 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
150 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
151 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
152 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
153 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
154 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
155 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
156 2855683550 Micromonospora sp. RP3T Isolate Unclassified
157 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
158 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
159 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
160 2858868258 Micromonospora sp. MH33 Isolate Unclassified
161 2858882152 Micromonospora noduli MED15 Isolate Nodule
162 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
163 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
164 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
165 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
166 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
167 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
168 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
169 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
170 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
171 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
172 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
173 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
174 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
175 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
176 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
177 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
178 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
179 2902582711 Micromonospora sp. AP08 Isolate Unclassified
180 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
181 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
182 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
183 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
184 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
185 649633069 Micromonospora sp. L5 Isolate Unclassified
186 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
187 8002775197 Frankia nepalensis CN7 Isolate Nodule
188 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
189 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
190 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
191 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
192 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere
193 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
194 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
195 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
196 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 75.1
Metatranscriptomes 3.32
Isolates 21.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.24
Nodule 3.73
Rhizoplane 1.66
Rhizosphere 76.76
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501032_0012290 3300049569 Bacteria 6125
2 JGI25406J46586_10024545 3300003203 Bacteria 2360
3 JGI25406J46586_10031670 3300003203 Bacteria 1975
4 Ga0070658_10001868 3300005327 Bacteria 17746
5 Ga0070683_100000685 3300005329 Bacteria 24512
6 Ga0070683_100020241 3300005329 Bacteria 5920
7 Ga0070660_100296455 3300005339 Bacteria 1325
8 Ga0070661_100015040 3300005344 Bacteria 5459
9 Ga0070692_10072736 3300005345 Bacteria 1835
10 Ga0070668_100000936 3300005347 Bacteria 20339
11 Ga0070668_100030190 3300005347 Bacteria 4121
12 Ga0070659_100025803 3300005366 Bacteria 4519
13 Ga0070713_100213300 3300005436 Bacteria 1749
14 Ga0070663_100067307 3300005455 Bacteria 2597
15 Ga0070678_100055149 3300005456 Bacteria 2900
16 Ga0070681_10126953 3300005458 Bacteria 2483
17 Ga0070679_100068479 3300005530 Bacteria 3540
18 Ga0070684_100003854 3300005535 Bacteria 11345
19 Ga0070684_100004937 3300005535 Bacteria 10179
20 Ga0070684_100069293 3300005535 Bacteria 3102
21 Ga0070665_100041959 3300005548 Bacteria 4599
22 Ga0068855_100010603 3300005563 Bacteria 11109
23 Ga0070664_100239008 3300005564 Bacteria 1630
24 Ga0068857_100128674 3300005577 Bacteria 2283
25 Ga0068857_100147575 3300005577 Bacteria 2129
26 Ga0068856_100310138 3300005614 Bacteria 1595
27 Ga0068856_100480126 3300005614 Bacteria 1264
28 Ga0068852_100002599 3300005616 Bacteria 12471
29 Ga0068864_100261108 3300005618 Bacteria 1611
30 Ga0068870_10390759 3300005840 Bacteria 903
31 Ga0068858_100015114 3300005842 Bacteria 7260
32 Ga0068860_100212542 3300005843 Bacteria 1876
33 Ga0068862_100272367 3300005844 Bacteria 1549
34 Ga0081540_1002033 3300005983 Bacteria 16870
35 Ga0081540_1025620 3300005983 Bacteria 3388
36 Ga0081540_1101840 3300005983 Bacteria 1235
37 Ga0081539_10001271 3300005985 Bacteria 44503
38 Ga0081539_10002480 3300005985 Bacteria 25953
39 Ga0081539_10003880 3300005985 Bacteria 17462
40 Ga0081539_10024215 3300005985 Bacteria 3947
41 Ga0070717_10314786 3300006028 Bacteria 1394
42 Ga0068871_100383545 3300006358 Bacteria 1249
43 Ga0075428_100002213 3300006844 Bacteria 21066
44 Ga0075428_100217059 3300006844 Bacteria 2066
45 Ga0075430_100000091 3300006846 Bacteria 52409
46 Ga0075431_100049976 3300006847 Bacteria 4311
47 Ga0075431_100082469 3300006847 Bacteria 3319
48 Ga0075429_100001463 3300006880 Bacteria 19406
49 Ga0105240_10025821 3300009093 Bacteria 7714
50 Ga0111539_10130431 3300009094 Bacteria 2943
51 Ga0114129_10011782 3300009147 Bacteria 12442
52 Ga0114129_10131418 3300009147 Bacteria 3438
53 Ga0114129_10250278 3300009147 Bacteria 2379
54 Ga0114129_10301852 3300009147 Bacteria 2134
55 Ga0105241_10002124 3300009174 Bacteria 14987
56 Ga0105241_10569341 3300009174 Bacteria 1019
57 Ga0105237_10041641 3300009545 Bacteria 4632
58 Ga0105238_10018236 3300009551 Bacteria 7139
59 Ga0105239_10128529 3300010375 Bacteria 2817
60 Ga0157369_10036739 3300013105 Bacteria 5366
61 Ga0157369_10295042 3300013105 Bacteria 1687
62 Ga0157374_10179181 3300013296 Bacteria 2069
63 Ga0157378_10229632 3300013297 Bacteria 1768
64 Ga0163162_10372840 3300013306 Bacteria 1560
65 Ga0157372_10157129 3300013307 Bacteria 2627
66 Ga0163163_10162859 3300014325 Bacteria 2276
67 Ga0163163_10598204 3300014325 Bacteria 1166
68 Ga0197907_10781823 3300020069 Bacteria 1000
69 Ga0197907_11101578 3300020069 Bacteria 1694
70 Ga0206356_11502305 3300020070 Bacteria 2481
71 Ga0206351_10332341 3300020077 Bacteria 932
72 Ga0206352_11082911 3300020078 Bacteria 1345
73 Ga0206354_11117902 3300020081 Bacteria 4011
74 Ga0224712_10013404 3300022467 Bacteria 2609
75 Ga0224712_10060851 3300022467 Bacteria 1504
76 Ga0207647_10003964 3300025904 Bacteria 11048
77 Ga0207705_10004789 3300025909 Bacteria 10191
78 Ga0207654_10013421 3300025911 Bacteria 4215
79 Ga0207707_10090531 3300025912 Bacteria 2674
80 Ga0207695_10007586 3300025913 Bacteria 13756
81 Ga0207671_10001734 3300025914 Bacteria 24557
82 Ga0207657_10116140 3300025919 Bacteria 2205
83 Ga0207649_10055702 3300025920 Bacteria 2466
84 Ga0207652_10082723 3300025921 Bacteria 2809
85 Ga0207694_10005933 3300025924 Bacteria 9368
86 Ga0207664_10248387 3300025929 Bacteria 1552
87 Ga0207709_10112381 3300025935 Bacteria 1824
88 Ga0207661_10002915 3300025944 Bacteria 11821
89 Ga0207661_10010866 3300025944 Bacteria 6570
90 Ga0207679_10018197 3300025945 Bacteria 4703
91 Ga0207712_10173282 3300025961 Bacteria 1688
92 Ga0207668_10001644 3300025972 Bacteria 13055
93 Ga0207668_10031750 3300025972 Bacteria 3483
94 Ga0207678_10160951 3300026067 Bacteria 1917
95 Ga0207702_10087807 3300026078 Bacteria 2716
96 Ga0207676_10437033 3300026095 Bacteria 1231
97 Ga0207674_10067976 3300026116 Bacteria 3586
98 Ga0207674_10566982 3300026116 Bacteria 1097
99 Ga0207683_10121605 3300026121 Bacteria 2344
100 Ga0207698_10020775 3300026142 Bacteria 4526
101 Ga0207428_10113677 3300027907 Bacteria 2081
102 Ga0268266_10118153 3300028379 Bacteria 2357
103 Ga0268266_10127315 3300028379 Bacteria 2274
104 Ga0268266_10300022 3300028379 Bacteria 1498
105 Ga0268265_10025618 3300028380 Bacteria 4190
106 Ga0268265_10278581 3300028380 Bacteria 1495
107 Ga0268264_10065455 3300028381 Bacteria 3062
108 Ga0307515_10000038 3300028794 Bacteria 331376
109 Ga0307515_10042640 3300028794 Bacteria 7089
110 Ga0307509_10025678 3300031507 Bacteria 6577
111 Ga0307516_10000553 3300031730 Bacteria 50262
112 Ga0307516_10099515 3300031730 Bacteria 2724
113 Ga0307406_10091239 3300031901 Bacteria 2052
114 Ga0307406_10472168 3300031901 Bacteria 1011
115 Ga0307406_10486089 3300031901 Bacteria 998
116 Ga0307409_100010729 3300031995 Bacteria 5721
117 Ga0307409_100086798 3300031995 Bacteria 2548
118 Ga0307416_100246594 3300032002 Bacteria 1735
119 Ga0307415_100219144 3300032126 Bacteria 1524
120 Ga0373951_0000125 3300035091 Bacteria 28828
121 Ga0373953_0075216 3300035117 Bacteria 1398
122 Ga0373935_0015006 3300035692 Bacteria 4678
123 Ga0451853_3748319 3300041512 Bacteria 2546
124 Ga0466972_0000700 3300044658 Bacteria 16015
125 Ga0466965_0001836 3300044683 Bacteria 8834
126 Ga0466966_0205161 3300044684 Bacteria 1192
127 Ga0466970_0010370 3300044765 Bacteria 4730
128 Ga0466957_0139504 3300044842 Bacteria 1561
129 Ga0466960_0000433 3300044901 Bacteria 14318
130 Ga0466967_0234354 3300045976 Bacteria 1749
131 Ga0495603_0097669 3300046455 Bacteria 1715
132 Ga0495638_0128750 3300046460 Bacteria 1489
133 Ga0495662_0102140 3300046476 Bacteria 1403
134 Ga0495585_0016274 3300046492 Bacteria 4309
135 Ga0495606_0001394 3300046507 Bacteria 32668
136 Ga0495628_0045438 3300046516 Bacteria 3492
137 Ga0495640_0001568 3300046533 Bacteria 18001
138 Ga0495668_0001004 3300046616 Bacteria 30347
139 Ga0495634_0038296 3300046642 Bacteria 3270
140 Ga0495625_0000363 3300046660 Bacteria 69433
141 Ga0495588_0071567 3300046674 Bacteria 1803
142 Ga0495613_0009222 3300046689 Bacteria 7317
143 Ga0495604_0021018 3300047317 Bacteria 5207
144 Ga0495676_0011755 3300047321 Bacteria 7896
145 Ga0495683_0175326 3300047323 Bacteria 983
146 Ga0495685_055555 3300047447 Bacteria 1339
147 Ga0495686_0128275 3300047472 Bacteria 1506
148 Ga0495626_0000052 3300048091 Bacteria 156421
149 Ga0496108_0000035 3300048911 Bacteria 154937
150 Ga0496108_0210856 3300048911 Bacteria 1686
151 Ga0496111_0024129 3300048914 Bacteria 4278
152 Ga0496112_0055970 3300048915 Bacteria 3881
153 Ga0496120_0112097 3300048923 Bacteria 1423
154 Ga0496124_0183452 3300048927 Bacteria 1608
155 Ga0496126_0121564 3300048929 Bacteria 2264
156 Ga0496126_0123655 3300048929 Bacteria 2241
157 Ga0501033_0014081 3300049570 Bacteria 6081
158 Ga0501034_0018108 3300049571 Bacteria 7229
159 Ga0501034_0141473 3300049571 Bacteria 2385
160 Ga0501036_0005157 3300049572 Bacteria 10561
161 Ga0501037_0004374 3300049573 Bacteria 10257
162 Ga0501038_0003804 3300049574 Bacteria 14045
163 Ga0501039_0010961 3300049575 Bacteria 6909
164 Ga0501043_0106119 3300049579 Bacteria 2206
165 Ga0501043_0145871 3300049579 Bacteria 1853
166 Ga0501047_0007291 3300049581 Bacteria 10394
167 Ga0501047_0027750 3300049581 Bacteria 5454
168 Ga0501047_0091691 3300049581 Bacteria 2917
169 Ga0501068_0106082 3300049584 Bacteria 1744
170 Ga0501070_0008181 3300049586 Bacteria 8844
171 Ga0501235_021257 3300049669 Bacteria 1442
172 Ga0501282_002463 3300049778 Bacteria 2009
173 Ga0501044_0007912 3300049823 Bacteria 11689
174 Ga0501044_0020899 3300049823 Bacteria 6988
175 Ga0501044_0045370 3300049823 Bacteria 4553
176 Ga0501044_0105282 3300049823 Bacteria 2834
177 Ga0501045_0068708 3300049824 Bacteria 2603
178 nmdc:mga05p37_143408_c1 3300050507 Bacteria 2925
179 nmdc:mga05p37_70709_c1 3300050507 Bacteria 4293
180 nmdc:mga0qj67_692_c1 3300050509 Bacteria 22986
181 nmdc:mga06r32_23060_c1 3300050510 Bacteria 5757
182 nmdc:mga06r32_6652_c1 3300050510 Bacteria 10388
183 nmdc:mga08y16_85861_c1 3300050511 Bacteria 3280
184 Ga0495619_0079095 3300053085 Bacteria 2211
185 Ga0500644_0035411 3300053088 Bacteria 1617
186 Ga0500644_0074101 3300053088 Bacteria 1235
187 Ga0500630_074801 3300053159 Bacteria 1596
188 Ga0501084_0154497 3300054114 Bacteria 1935
189 Ga0466962_0131875 3300061719 Bacteria 1208
190 2501942442 2501939600 Bacteria 6907073
191 2508678150 2508501039 Bacteria 9978592
192 2623586077 2622736626 Bacteria 7181580
193 2626635971 2626541554 Bacteria 7741902
194 2676480539 2675903059 Bacteria 8644972
195 2772641270 2772190715 Bacteria 6959372
196 2804846845 2802429296 Bacteria 7227771
197 2831940758 2831935698 Bacteria 5963223
198 2832009617 2832004796 Bacteria 6538017
199 2855671715 2855670206 Bacteria 7120389
200 2855683186 2855676851 Bacteria 7063653
201 2855684933 2855683550 Bacteria 7134265
202 2856859974 2856858025 Bacteria 7255264
203 2857294289 2857288857 Bacteria 7189066
204 2858852361 2858848962 Bacteria 6963058
205 2858873655 2858868258 Bacteria 7683772
206 2858887890 2858882152 Bacteria 7230291
207 2858895137 2858888857 Bacteria 7060307
208 2858898874 2858895516 Bacteria 7378898
209 2858904641 2858902515 Bacteria 7086037
210 2866065521 2866065130 Bacteria 6518152
211 2867304387 2867302475 Bacteria 7087181
212 2867313716 2867312974 Bacteria 7058875
213 2867322460 2867319477 Bacteria 7069771
214 2867508707 2867507094 Bacteria 6506033
215 2869054476 2869048445 Bacteria 6875584
216 2869068019 2869061728 Bacteria 7112407
217 2869071091 2869068681 Bacteria 7205615
218 2875396279 2875391855 Bacteria 7600475
219 2880494181 2880489317 Bacteria 7096270
220 2880498145 2880495981 Bacteria 7340502
221 2884995867 2884994152 Bacteria 4492978
222 2887485147 2887478801 Bacteria 8972725
223 2891329319 2891326441 Bacteria 6439512
224 2902587562 2902582711 Bacteria 6187705
225 2929220188 2929219909 Bacteria 6984360
226 2929226722 2929226422 Bacteria 7248583
227 2966604862 2966598605 Bacteria 7676064
228 2996226158 2996221748 Bacteria 6799777
229 3006328336 3006321560 Bacteria 8247479
230 649810457 649633069 Bacteria 6962533
231 8001787561 8001781756 Bacteria 9586736
232 8002775217 8002775197 Bacteria 10728764
233 8003832560 8003830390 Bacteria 6541657
234 8003858143 8003856774 Bacteria 7675274
235 8003875397 8003870546 Bacteria 7396674
236 8025417910 8025413630 Bacteria 7014048
237 8054476498 8054472261 Bacteria 7464355
238 8054705462 8054704163 Bacteria 7247792
239 8054728075 8054727385 Bacteria 7558670
240 8054740827 8054734606 Bacteria 6947278
241 8055413287 8055412473 Bacteria 6257500
242 Ga0501032_0012290
243 JGI25406J46586_10024545
244 JGI25406J46586_10031670
245 Ga0070658_10001868
246 Ga0070683_100000685
247 Ga0070683_100020241
248 Ga0070660_100296455
249 Ga0070661_100015040
250 Ga0070692_10072736
251 Ga0070668_100000936
252 Ga0070668_100030190
253 Ga0070659_100025803
254 Ga0070713_100213300
255 Ga0070663_100067307
256 Ga0070678_100055149
257 Ga0070681_10126953
258 Ga0070679_100068479
259 Ga0070684_100003854
260 Ga0070684_100004937
261 Ga0070684_100069293
262 Ga0070665_100041959
263 Ga0068855_100010603
264 Ga0070664_100239008
265 Ga0068857_100128674
266 Ga0068857_100147575
267 Ga0068856_100310138
268 Ga0068856_100480126
269 Ga0068852_100002599
270 Ga0068864_100261108
271 Ga0068870_10390759
272 Ga0068858_100015114
273 Ga0068860_100212542
274 Ga0068862_100272367
275 Ga0081540_1002033
276 Ga0081540_1025620
277 Ga0081540_1101840
278 Ga0081539_10001271
279 Ga0081539_10002480
280 Ga0081539_10003880
281 Ga0081539_10024215
282 Ga0070717_10314786
283 Ga0068871_100383545
284 Ga0075428_100002213
285 Ga0075428_100217059
286 Ga0075430_100000091
287 Ga0075431_100049976
288 Ga0075431_100082469
289 Ga0075429_100001463
290 Ga0105240_10025821
291 Ga0111539_10130431
292 Ga0114129_10011782
293 Ga0114129_10131418
294 Ga0114129_10250278
295 Ga0114129_10301852
296 Ga0105241_10002124
297 Ga0105241_10569341
298 Ga0105237_10041641
299 Ga0105238_10018236
300 Ga0105239_10128529
301 Ga0157369_10036739
302 Ga0157369_10295042
303 Ga0157374_10179181
304 Ga0157378_10229632
305 Ga0163162_10372840
306 Ga0157372_10157129
307 Ga0163163_10162859
308 Ga0163163_10598204
309 Ga0197907_10781823
310 Ga0197907_11101578
311 Ga0206356_11502305
312 Ga0206351_10332341
313 Ga0206352_11082911
314 Ga0206354_11117902
315 Ga0224712_10013404
316 Ga0224712_10060851
317 Ga0207647_10003964
318 Ga0207705_10004789
319 Ga0207654_10013421
320 Ga0207707_10090531
321 Ga0207695_10007586
322 Ga0207671_10001734
323 Ga0207657_10116140
324 Ga0207649_10055702
325 Ga0207652_10082723
326 Ga0207694_10005933
327 Ga0207664_10248387
328 Ga0207709_10112381
329 Ga0207661_10002915
330 Ga0207661_10010866
331 Ga0207679_10018197
332 Ga0207712_10173282
333 Ga0207668_10001644
334 Ga0207668_10031750
335 Ga0207678_10160951
336 Ga0207702_10087807
337 Ga0207676_10437033
338 Ga0207674_10067976
339 Ga0207674_10566982
340 Ga0207683_10121605
341 Ga0207698_10020775
342 Ga0207428_10113677
343 Ga0268266_10118153
344 Ga0268266_10127315
345 Ga0268266_10300022
346 Ga0268265_10025618
347 Ga0268265_10278581
348 Ga0268264_10065455
349 Ga0307515_10000038
350 Ga0307515_10042640
351 Ga0307509_10025678
352 Ga0307516_10000553
353 Ga0307516_10099515
354 Ga0307406_10091239
355 Ga0307406_10472168
356 Ga0307406_10486089
357 Ga0307409_100010729
358 Ga0307409_100086798
359 Ga0307416_100246594
360 Ga0307415_100219144
361 Ga0373951_0000125
362 Ga0373953_0075216
363 Ga0373935_0015006
364 Ga0451853_3748319
365 Ga0466972_0000700
366 Ga0466965_0001836
367 Ga0466966_0205161
368 Ga0466970_0010370
369 Ga0466957_0139504
370 Ga0466960_0000433
371 Ga0466967_0234354
372 Ga0495603_0097669
373 Ga0495638_0128750
374 Ga0495662_0102140
375 Ga0495585_0016274
376 Ga0495606_0001394
377 Ga0495628_0045438
378 Ga0495640_0001568
379 Ga0495668_0001004
380 Ga0495634_0038296
381 Ga0495625_0000363
382 Ga0495588_0071567
383 Ga0495613_0009222
384 Ga0495604_0021018
385 Ga0495676_0011755
386 Ga0495683_0175326
387 Ga0495685_055555
388 Ga0495686_0128275
389 Ga0495626_0000052
390 Ga0496108_0000035
391 Ga0496108_0210856
392 Ga0496111_0024129
393 Ga0496112_0055970
394 Ga0496120_0112097
395 Ga0496124_0183452
396 Ga0496126_0121564
397 Ga0496126_0123655
398 Ga0501033_0014081
399 Ga0501034_0018108
400 Ga0501034_0141473
401 Ga0501036_0005157
402 Ga0501037_0004374
403 Ga0501038_0003804
404 Ga0501039_0010961
405 Ga0501043_0106119
406 Ga0501043_0145871
407 Ga0501047_0007291
408 Ga0501047_0027750
409 Ga0501047_0091691
410 Ga0501068_0106082
411 Ga0501070_0008181
412 Ga0501235_021257
413 Ga0501282_002463
414 Ga0501044_0007912
415 Ga0501044_0020899
416 Ga0501044_0045370
417 Ga0501044_0105282
418 Ga0501045_0068708
419 nmdc:mga05p37_143408_c1
420 nmdc:mga05p37_70709_c1
421 nmdc:mga0qj67_692_c1
422 nmdc:mga06r32_23060_c1
423 nmdc:mga06r32_6652_c1
424 nmdc:mga08y16_85861_c1
425 Ga0495619_0079095
426 Ga0500644_0035411
427 Ga0500644_0074101
428 Ga0500630_074801
429 Ga0501084_0154497
430 Ga0466962_0131875
431 2501942442
432 2508678150
433 2623586077
434 2626635971
435 2676480539
436 2772641270
437 2804846845
438 2831940758
439 2832009617
440 2855671715
441 2855683186
442 2855684933
443 2856859974
444 2857294289
445 2858852361
446 2858873655
447 2858887890
448 2858895137
449 2858898874
450 2858904641
451 2866065521
452 2867304387
453 2867313716
454 2867322460
455 2867508707
456 2869054476
457 2869068019
458 2869071091
459 2875396279
460 2880494181
461 2880498145
462 2884995867
463 2887485147
464 2891329319
465 2902587562
466 2929220188
467 2929226722
468 2966604862
469 2996226158
470 3006328336
471 649810457
472 8001787561
473 8002775217
474 8003832560
475 8003858143
476 8003875397
477 8025417910
478 8054476498
479 8054705462
480 8054728075
481 8054740827
482 8055413287

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14361

RsbRD_N

RsbT co-antagonist protein rsbRD N-terminal domain

28

127

0.96

PF01740

STAS

STAS domain

175

281

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6jhk-assembly1.cif.gz_A crystal structure of bacillus subtilis rsbs 0.9065 161 275
6jhk-assembly1.cif.gz_A crystal structure of bacillus subtilis rsbs 0.8849 161 275
3zxn-assembly1.cif.gz_A moorella thermoacetica rsbs s58e 0.8752 163 277
6qcm-assembly1.cif.gz_d cryo em structure of the listeria stressosome 0.8641 160 269
7b0u-assembly1.cif.gz_F stressosome complex from listeria innocua 0.8561 163 277
ID Description Score Start End Superfamily
3if5A02 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.8517 158 238 3.30.750.24
af_A0A1D8PRZ2_628_764_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.844 169 272 3.30.750.24
af_Q7K155_460_563_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.834 171 263 3.30.750.24
af_P53273_654_785_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.8175 169 275 3.30.750.24
af_P9WGF7_437_560_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.8173 165 274 3.30.750.24
ID Description Score Start End GO Terms
AF-A0A017T942-F1-model_v4 RsbR, positive regulator of sigma-B 0.8969 162 284
AF-A0A564Q1T5-F1-model_v4 STAS domain-containing protein 0.8886 160 253
AF-A0A6J4IML5-F1-model_v4 RsbS, negative regulator of sigma-B 0.8875 163 283
AF-A0A6G2XJT0-F1-model_v4 STAS domain-containing protein 0.8857 161 284
AF-A0A1I1NNQ9-F1-model_v4 Anti-anti-sigma factor 0.881 163 277

Map