F353912

General Info

Members Datasets Scaffolds Average Seq Length
241 155 482 279

Family's Representative Sequence

Representative Sequence 3300031903|Ga0307407_10215814|Ga0307407_102158142
Length 305
Sequence MAEPFSGAQRPSDGRIRPGSGFVEVADRCWVARFEFLDVNVGLVAGDRGLLVVDTHASEVEARRVVEQVRRLGAGEVVAVVNTHEHFDHTFGNVVFSEAYGAPAIYAHEAAAEALLVTGPALQRRAAEDPSDLRHADIAATRLLPPTETFSSARVVDLGDRIVELVHPGRGHTAGDTVVRVGDADVLFAGDLVEESAVRSGVPGFGDDCFPLEWPATLDLVIGLLGADPVVVPGHGLPVGKAFVEEQRSAVGVVAETIRDLASRGVPVTDALAATEWPYPVEALGSAVRRGYEQLPRSAKSLPLI

Samples

Sample ID Description Type Environment
1 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
27 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
46 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
47 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
48 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
71 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
74 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
75 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
76 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
77 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
78 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
79 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
80 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
83 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
84 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
85 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
86 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
87 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
88 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
89 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
90 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
91 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
92 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
93 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
94 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
95 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
96 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
97 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
98 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
99 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
100 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
101 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
102 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
103 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
104 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
105 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
106 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
107 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
108 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
109 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
110 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
111 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
112 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
113 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
122 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
123 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
124 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
125 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
126 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
127 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
128 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
129 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
130 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
131 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
132 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
137 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
138 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
139 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
140 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
141 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
142 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
143 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
144 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
145 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
146 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
147 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
148 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
149 2643221604 Nocardioides sp. Root190 Isolate Unclassified
150 2643221615 Nocardioides sp. Root224 Isolate Unclassified
151 2643221617 Nocardioides sp. Root79 Isolate Unclassified
152 2643221620 Nocardioides sp. Root240 Isolate Unclassified
153 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
154 2738541305 Nocardioides sp. CF167 Isolate Unclassified
155 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.27
Metatranscriptomes 0.83
Isolates 2.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.13
Nodule 0
Rhizoplane 12.03
Rhizosphere 75.1
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307407_10215814 3300031903 Bacteria 1294
2 LJQas_1002946 3300000549 Bacteria 2311
3 JGI24744J21845_10001229 3300002077 Bacteria 5025
4 rootL2_10223299 3300003322 Bacteria 1325
5 Ga0006562J51391_1038408 3300003578 Bacteria 3340
6 Ga0070683_100371364 3300005329 Bacteria 1362
7 Ga0070682_100075512 3300005337 Bacteria 2167
8 Ga0070682_100112369 3300005337 Bacteria 1818
9 Ga0070682_100116762 3300005337 Bacteria 1786
10 Ga0070689_100105612 3300005340 Bacteria 2234
11 Ga0070687_100014384 3300005343 Bacteria 3555
12 Ga0070692_10001188 3300005345 Bacteria 9212
13 Ga0070669_100179137 3300005353 Bacteria 1657
14 Ga0070673_100140394 3300005364 Bacteria 2037
15 Ga0070659_100088247 3300005366 Bacteria 2483
16 Ga0070659_100218122 3300005366 Bacteria 1574
17 Ga0070659_100386486 3300005366 Bacteria 1179
18 Ga0070700_100014285 3300005441 Bacteria 4480
19 Ga0070663_100049841 3300005455 Bacteria 2976
20 Ga0070681_10152279 3300005458 Bacteria 2239
21 Ga0068867_100150994 3300005459 Bacteria 1825
22 Ga0070679_100046629 3300005530 Bacteria 4319
23 Ga0070684_100019258 3300005535 Bacteria 5643
24 Ga0070684_100133289 3300005535 Bacteria 2242
25 Ga0070684_100375698 3300005535 Bacteria 1309
26 Ga0070672_100026819 3300005543 Bacteria 4293
27 Ga0070665_100001493 3300005548 Bacteria 27224
28 Ga0070664_100027019 3300005564 Bacteria 4767
29 Ga0068854_100066338 3300005578 Bacteria 2627
30 Ga0068852_100003391 3300005616 Bacteria 11128
31 Ga0068864_100146195 3300005618 Bacteria 2137
32 Ga0068866_10051967 3300005718 Bacteria 2089
33 Ga0068870_10006073 3300005840 Bacteria 5305
34 Ga0068862_100245198 3300005844 Bacteria 1631
35 Ga0081455_10048948 3300005937 Bacteria 3647
36 Ga0075365_10044439 3300006038 Bacteria 2910
37 Ga0075365_10049346 3300006038 Bacteria 2773
38 Ga0075365_10049751 3300006038 Bacteria 2762
39 Ga0075365_10051565 3300006038 Bacteria 2718
40 Ga0075365_10064350 3300006038 Bacteria 2456
41 Ga0075365_10081780 3300006038 Bacteria 2189
42 Ga0075365_10156638 3300006038 Bacteria 1586
43 Ga0075365_10321028 3300006038 Bacteria 1091
44 Ga0075368_10005213 3300006042 Bacteria 4460
45 Ga0075364_10054747 3300006051 Bacteria 2609
46 Ga0075364_10212604 3300006051 Bacteria 1312
47 Ga0075428_100403499 3300006844 Bacteria 1465
48 Ga0075430_100178920 3300006846 Bacteria 1764
49 Ga0075431_100007995 3300006847 Bacteria 10550
50 Ga0068865_100155192 3300006881 Bacteria 1740
51 Ga0111539_10010196 3300009094 Bacteria 11840
52 Ga0105243_10009691 3300009148 Bacteria 7335
53 Ga0105243_10274136 3300009148 Bacteria 1516
54 Ga0105242_10127381 3300009176 Bacteria 2193
55 Ga0105242_10284370 3300009176 Bacteria 1503
56 Ga0105248_10044056 3300009177 Bacteria 5004
57 Ga0105238_10553276 3300009551 Bacteria 1155
58 Ga0105239_10095899 3300010375 Bacteria 3277
59 Ga0105239_10919905 3300010375 Bacteria 1004
60 Ga0157375_10086578 3300013308 Bacteria 3184
61 Ga0157375_10110319 3300013308 Bacteria 2848
62 Ga0157375_10202705 3300013308 Bacteria 2140
63 Ga0163163_10026220 3300014325 Bacteria 5568
64 Ga0163163_10093979 3300014325 Bacteria 3016
65 Ga0157380_10022222 3300014326 Bacteria 4771
66 Ga0157377_10006906 3300014745 Bacteria 5445
67 Ga0157377_10163833 3300014745 Bacteria 1385
68 Ga0206353_11308877 3300020082 Bacteria 2139
69 Ga0207642_10022899 3300025899 Bacteria 2486
70 Ga0207688_10215279 3300025901 Bacteria 1155
71 Ga0207647_10016646 3300025904 Bacteria 5014
72 Ga0207643_10001992 3300025908 Bacteria 11289
73 Ga0207707_10126103 3300025912 Bacteria 2239
74 Ga0207662_10017029 3300025918 Bacteria 4106
75 Ga0207652_10042240 3300025921 Bacteria 3879
76 Ga0207681_10160555 3300025923 Bacteria 1694
77 Ga0207694_10061308 3300025924 Bacteria 2927
78 Ga0207659_10012921 3300025926 Bacteria 5332
79 Ga0207690_10020115 3300025932 Bacteria 4120
80 Ga0207686_10100018 3300025934 Bacteria 1934
81 Ga0207686_10185257 3300025934 Bacteria 1479
82 Ga0207669_10111841 3300025937 Bacteria 1832
83 Ga0207691_10004679 3300025940 Bacteria 13250
84 Ga0207661_10315175 3300025944 Bacteria 1405
85 Ga0207679_10245086 3300025945 Bacteria 1520
86 Ga0207679_10376233 3300025945 Bacteria 1244
87 Ga0207640_10020658 3300025981 Bacteria 3912
88 Ga0207678_10064386 3300026067 Bacteria 3150
89 Ga0207678_10104576 3300026067 Bacteria 2416
90 Ga0207708_10002352 3300026075 Bacteria 13889
91 Ga0207648_10009793 3300026089 Bacteria 9157
92 Ga0207676_10134011 3300026095 Bacteria 2111
93 Ga0207675_100082366 3300026118 Bacteria 3018
94 Ga0207428_10084317 3300027907 Bacteria 2477
95 Ga0268266_10012927 3300028379 Bacteria 7201
96 Ga0268265_10307968 3300028380 Bacteria 1429
97 Ga0307408_100439435 3300031548 Bacteria 1129
98 Ga0307405_10050782 3300031731 Bacteria 2570
99 Ga0307413_10267121 3300031824 Bacteria 1279
100 Ga0307407_10113981 3300031903 Bacteria 1702
101 Ga0307412_10117390 3300031911 Bacteria 1910
102 Ga0307412_10371981 3300031911 Bacteria 1154
103 Ga0307409_100028387 3300031995 Bacteria 3985
104 Ga0307409_100031752 3300031995 Bacteria 3817
105 Ga0307409_100166458 3300031995 Bacteria 1935
106 Ga0307416_100003062 3300032002 Bacteria 9770
107 Ga0307416_100062065 3300032002 Bacteria 3054
108 Ga0307411_10371493 3300032005 Bacteria 1173
109 Ga0307415_100000385 3300032126 Bacteria 18744
110 Ga0307415_100026245 3300032126 Bacteria 3671
111 Ga0395900_0127257 3300037418 Bacteria 2612
112 Ga0395900_0196549 3300037418 Bacteria 2043
113 Ga0439438_037652 3300041405 Bacteria 1265
114 Ga0439445_0057354 3300042004 Bacteria 1060
115 Ga0439434_0007888 3300042435 Bacteria 3122
116 Ga0466972_0048945 3300044658 Bacteria 2042
117 Ga0466965_0008197 3300044683 Bacteria 4825
118 Ga0466965_0082512 3300044683 Bacteria 1626
119 Ga0466965_0168270 3300044683 Bacteria 1152
120 Ga0466961_0073328 3300044693 Bacteria 2171
121 Ga0466963_0101945 3300044694 Bacteria 1965
122 Ga0466963_0320716 3300044694 Bacteria 1090
123 Ga0466971_0009885 3300044719 Bacteria 4166
124 Ga0466970_0077898 3300044765 Bacteria 1788
125 Ga0466957_0139483 3300044842 Bacteria 1561
126 Ga0466957_0273566 3300044842 Bacteria 1128
127 Ga0466960_0023397 3300044901 Bacteria 2774
128 Ga0466960_0034949 3300044901 Bacteria 2345
129 Ga0466960_0036185 3300044901 Bacteria 2311
130 Ga0466960_0151903 3300044901 Bacteria 1238
131 Ga0466967_0017776 3300045976 Bacteria 5659
132 Ga0466967_0070047 3300045976 Bacteria 3136
133 Ga0466967_0070845 3300045976 Bacteria 3119
134 Ga0466967_0098525 3300045976 Bacteria 2669
135 Ga0466967_0240780 3300045976 Bacteria 1726
136 Ga0466967_0290677 3300045976 Bacteria 1570
137 Ga0495651_0170545 3300046462 Bacteria 1550
138 Ga0495582_0399841 3300046473 Bacteria 792
139 Ga0495639_0100633 3300046475 Bacteria 1364
140 Ga0495608_0114852 3300046511 Bacteria 1729
141 Ga0495658_0263774 3300046683 Bacteria 1085
142 Ga0495674_0692927 3300047319 Bacteria 800
143 Ga0496101_0018431 3300048904 Bacteria 4747
144 Ga0496101_0274550 3300048904 Bacteria 1316
145 Ga0496102_0097817 3300048905 Bacteria 2722
146 Ga0496103_0086889 3300048906 Bacteria 1971
147 Ga0496103_0270663 3300048906 Bacteria 1093
148 Ga0496104_0002517 3300048907 Bacteria 15782
149 Ga0496105_0001870 3300048908 Bacteria 15098
150 Ga0496107_0015662 3300048910 Bacteria 5316
151 Ga0496107_0027684 3300048910 Bacteria 4025
152 Ga0496107_0056410 3300048910 Bacteria 2838
153 Ga0496108_0023034 3300048911 Bacteria 5123
154 Ga0496108_0106102 3300048911 Bacteria 2399
155 Ga0496108_0427699 3300048911 Bacteria 1157
156 Ga0496108_0600805 3300048911 Bacteria 959
157 Ga0496109_0010364 3300048912 Bacteria 7962
158 Ga0496109_0184122 3300048912 Bacteria 1962
159 Ga0496109_0532353 3300048912 Bacteria 1109
160 Ga0496110_0054521 3300048913 Bacteria 3517
161 Ga0496110_0071505 3300048913 Bacteria 3076
162 Ga0496110_0172883 3300048913 Bacteria 1960
163 Ga0496110_0477661 3300048913 Bacteria 1135
164 Ga0496110_0482999 3300048913 Bacteria 1129
165 Ga0496111_0008803 3300048914 Bacteria 6703
166 Ga0496113_0712595 3300048916 Bacteria 800
167 Ga0496114_0003751 3300048917 Bacteria 11707
168 Ga0496114_0339829 3300048917 Bacteria 1327
169 Ga0496114_0361984 3300048917 Bacteria 1283
170 Ga0496114_0597401 3300048917 Bacteria 973
171 Ga0496115_0004043 3300048918 Bacteria 10588
172 Ga0501031_0056941 3300049568 Bacteria 2547
173 Ga0501031_0102140 3300049568 Bacteria 1871
174 Ga0501032_0120286 3300049569 Bacteria 1736
175 Ga0501032_0254161 3300049569 Bacteria 1140
176 Ga0501034_0004327 3300049571 Bacteria 15834
177 Ga0501034_0044288 3300049571 Bacteria 4501
178 Ga0501039_0187609 3300049575 Bacteria 1626
179 Ga0501039_0195247 3300049575 Bacteria 1591
180 Ga0501039_0228111 3300049575 Bacteria 1464
181 Ga0501040_0012770 3300049576 Bacteria 5513
182 Ga0501042_0073898 3300049578 Bacteria 2439
183 Ga0501042_0148823 3300049578 Bacteria 1688
184 Ga0501047_0212027 3300049581 Bacteria 1795
185 Ga0501048_0082742 3300049582 Bacteria 2264
186 Ga0501048_0117789 3300049582 Bacteria 1876
187 Ga0501067_0001340 3300049583 Bacteria 13344
188 Ga0501067_0008425 3300049583 Bacteria 5722
189 Ga0501067_0010794 3300049583 Bacteria 5052
190 Ga0501067_0013813 3300049583 Bacteria 4472
191 Ga0501067_0058450 3300049583 Bacteria 2136
192 Ga0501068_0003304 3300049584 Bacteria 8642
193 Ga0501068_0037399 3300049584 Bacteria 2906
194 Ga0501069_0065801 3300049585 Bacteria 2027
195 Ga0501070_0003767 3300049586 Bacteria 13097
196 Ga0501070_0008331 3300049586 Bacteria 8758
197 Ga0501071_0003680 3300049587 Bacteria 9618
198 Ga0501072_0005873 3300049588 Bacteria 9348
199 Ga0501072_0017945 3300049588 Bacteria 5440
200 Ga0501073_0004447 3300049589 Bacteria 10531
201 Ga0501073_0029753 3300049589 Bacteria 3903
202 Ga0501074_0001641 3300049590 Bacteria 15162
203 Ga0501074_0004535 3300049590 Bacteria 9940
204 Ga0501075_0234871 3300049591 Bacteria 1398
205 Ga0501076_0238523 3300049592 Bacteria 1487
206 Ga0501076_0378957 3300049592 Bacteria 1163
207 Ga0501077_0001879 3300049593 Bacteria 12707
208 Ga0501079_0019585 3300049741 Bacteria 5168
209 Ga0501079_0048729 3300049741 Bacteria 3269
210 Ga0501079_0181462 3300049741 Bacteria 1643
211 Ga0501079_0408702 3300049741 Bacteria 1065
212 Ga0501080_0003825 3300049742 Bacteria 13305
213 Ga0501080_0010078 3300049742 Bacteria 8639
214 Ga0501080_0545242 3300049742 Bacteria 1033
215 Ga0501083_0043533 3300049744 Bacteria 3041
216 Ga0501035_0050435 3300049822 Bacteria 3730
217 Ga0501045_0096589 3300049824 Bacteria 2186
218 nmdc:mga03n38_48512_c1 3300050490 Bacteria 1884
219 nmdc:mga00v17_299836_c1 3300050491 Bacteria 1044
220 nmdc:mga00v17_38727_c1 3300050491 Bacteria 2852
221 nmdc:mga0yw44_141981_c1 3300050492 Bacteria 1561
222 nmdc:mga0yw44_1990_c1 3300050492 Bacteria 8485
223 nmdc:mga06z11_39581_c1 3300050494 Bacteria 2347
224 nmdc:mga04h51_30681_c1 3300050495 Bacteria 1693
225 nmdc:mga06r32_1299_c1 3300050510 Bacteria 22518
226 nmdc:mga08y16_40654_c1 3300050511 Bacteria 4872
227 Ga0500556_0003975 3300053104 Bacteria 4267
228 Ga0500593_000032 3300053117 Bacteria 49592
229 Ga0500573_0004416 3300053140 Bacteria 7411
230 Ga0500573_0181813 3300053140 Bacteria 1130
231 Ga0501084_0051850 3300054114 Bacteria 3434
232 Ga0501084_0167893 3300054114 Bacteria 1852
233 Ga0501082_0014409 3300060353 Bacteria 6803
234 Ga0501082_0094038 3300060353 Bacteria 2590
235 2644034239 2643221604 Bacteria 5014917
236 2644090205 2643221615 Bacteria 5487866
237 2644098633 2643221617 Bacteria 5139111
238 2644115994 2643221620 Bacteria 5134593
239 2644320049 2643221657 Bacteria 5490246
240 2738871467 2738541305 Bacteria 4910150
241 2812333601 2811994874 Bacteria 5367947
242 Ga0307407_10215814
243 LJQas_1002946
244 JGI24744J21845_10001229
245 rootL2_10223299
246 Ga0006562J51391_1038408
247 Ga0070683_100371364
248 Ga0070682_100075512
249 Ga0070682_100112369
250 Ga0070682_100116762
251 Ga0070689_100105612
252 Ga0070687_100014384
253 Ga0070692_10001188
254 Ga0070669_100179137
255 Ga0070673_100140394
256 Ga0070659_100088247
257 Ga0070659_100218122
258 Ga0070659_100386486
259 Ga0070700_100014285
260 Ga0070663_100049841
261 Ga0070681_10152279
262 Ga0068867_100150994
263 Ga0070679_100046629
264 Ga0070684_100019258
265 Ga0070684_100133289
266 Ga0070684_100375698
267 Ga0070672_100026819
268 Ga0070665_100001493
269 Ga0070664_100027019
270 Ga0068854_100066338
271 Ga0068852_100003391
272 Ga0068864_100146195
273 Ga0068866_10051967
274 Ga0068870_10006073
275 Ga0068862_100245198
276 Ga0081455_10048948
277 Ga0075365_10044439
278 Ga0075365_10049346
279 Ga0075365_10049751
280 Ga0075365_10051565
281 Ga0075365_10064350
282 Ga0075365_10081780
283 Ga0075365_10156638
284 Ga0075365_10321028
285 Ga0075368_10005213
286 Ga0075364_10054747
287 Ga0075364_10212604
288 Ga0075428_100403499
289 Ga0075430_100178920
290 Ga0075431_100007995
291 Ga0068865_100155192
292 Ga0111539_10010196
293 Ga0105243_10009691
294 Ga0105243_10274136
295 Ga0105242_10127381
296 Ga0105242_10284370
297 Ga0105248_10044056
298 Ga0105238_10553276
299 Ga0105239_10095899
300 Ga0105239_10919905
301 Ga0157375_10086578
302 Ga0157375_10110319
303 Ga0157375_10202705
304 Ga0163163_10026220
305 Ga0163163_10093979
306 Ga0157380_10022222
307 Ga0157377_10006906
308 Ga0157377_10163833
309 Ga0206353_11308877
310 Ga0207642_10022899
311 Ga0207688_10215279
312 Ga0207647_10016646
313 Ga0207643_10001992
314 Ga0207707_10126103
315 Ga0207662_10017029
316 Ga0207652_10042240
317 Ga0207681_10160555
318 Ga0207694_10061308
319 Ga0207659_10012921
320 Ga0207690_10020115
321 Ga0207686_10100018
322 Ga0207686_10185257
323 Ga0207669_10111841
324 Ga0207691_10004679
325 Ga0207661_10315175
326 Ga0207679_10245086
327 Ga0207679_10376233
328 Ga0207640_10020658
329 Ga0207678_10064386
330 Ga0207678_10104576
331 Ga0207708_10002352
332 Ga0207648_10009793
333 Ga0207676_10134011
334 Ga0207675_100082366
335 Ga0207428_10084317
336 Ga0268266_10012927
337 Ga0268265_10307968
338 Ga0307408_100439435
339 Ga0307405_10050782
340 Ga0307413_10267121
341 Ga0307407_10113981
342 Ga0307412_10117390
343 Ga0307412_10371981
344 Ga0307409_100028387
345 Ga0307409_100031752
346 Ga0307409_100166458
347 Ga0307416_100003062
348 Ga0307416_100062065
349 Ga0307411_10371493
350 Ga0307415_100000385
351 Ga0307415_100026245
352 Ga0395900_0127257
353 Ga0395900_0196549
354 Ga0439438_037652
355 Ga0439445_0057354
356 Ga0439434_0007888
357 Ga0466972_0048945
358 Ga0466965_0008197
359 Ga0466965_0082512
360 Ga0466965_0168270
361 Ga0466961_0073328
362 Ga0466963_0101945
363 Ga0466963_0320716
364 Ga0466971_0009885
365 Ga0466970_0077898
366 Ga0466957_0139483
367 Ga0466957_0273566
368 Ga0466960_0023397
369 Ga0466960_0034949
370 Ga0466960_0036185
371 Ga0466960_0151903
372 Ga0466967_0017776
373 Ga0466967_0070047
374 Ga0466967_0070845
375 Ga0466967_0098525
376 Ga0466967_0240780
377 Ga0466967_0290677
378 Ga0495651_0170545
379 Ga0495582_0399841
380 Ga0495639_0100633
381 Ga0495608_0114852
382 Ga0495658_0263774
383 Ga0495674_0692927
384 Ga0496101_0018431
385 Ga0496101_0274550
386 Ga0496102_0097817
387 Ga0496103_0086889
388 Ga0496103_0270663
389 Ga0496104_0002517
390 Ga0496105_0001870
391 Ga0496107_0015662
392 Ga0496107_0027684
393 Ga0496107_0056410
394 Ga0496108_0023034
395 Ga0496108_0106102
396 Ga0496108_0427699
397 Ga0496108_0600805
398 Ga0496109_0010364
399 Ga0496109_0184122
400 Ga0496109_0532353
401 Ga0496110_0054521
402 Ga0496110_0071505
403 Ga0496110_0172883
404 Ga0496110_0477661
405 Ga0496110_0482999
406 Ga0496111_0008803
407 Ga0496113_0712595
408 Ga0496114_0003751
409 Ga0496114_0339829
410 Ga0496114_0361984
411 Ga0496114_0597401
412 Ga0496115_0004043
413 Ga0501031_0056941
414 Ga0501031_0102140
415 Ga0501032_0120286
416 Ga0501032_0254161
417 Ga0501034_0004327
418 Ga0501034_0044288
419 Ga0501039_0187609
420 Ga0501039_0195247
421 Ga0501039_0228111
422 Ga0501040_0012770
423 Ga0501042_0073898
424 Ga0501042_0148823
425 Ga0501047_0212027
426 Ga0501048_0082742
427 Ga0501048_0117789
428 Ga0501067_0001340
429 Ga0501067_0008425
430 Ga0501067_0010794
431 Ga0501067_0013813
432 Ga0501067_0058450
433 Ga0501068_0003304
434 Ga0501068_0037399
435 Ga0501069_0065801
436 Ga0501070_0003767
437 Ga0501070_0008331
438 Ga0501071_0003680
439 Ga0501072_0005873
440 Ga0501072_0017945
441 Ga0501073_0004447
442 Ga0501073_0029753
443 Ga0501074_0001641
444 Ga0501074_0004535
445 Ga0501075_0234871
446 Ga0501076_0238523
447 Ga0501076_0378957
448 Ga0501077_0001879
449 Ga0501079_0019585
450 Ga0501079_0048729
451 Ga0501079_0181462
452 Ga0501079_0408702
453 Ga0501080_0003825
454 Ga0501080_0010078
455 Ga0501080_0545242
456 Ga0501083_0043533
457 Ga0501035_0050435
458 Ga0501045_0096589
459 nmdc:mga03n38_48512_c1
460 nmdc:mga00v17_299836_c1
461 nmdc:mga00v17_38727_c1
462 nmdc:mga0yw44_141981_c1
463 nmdc:mga0yw44_1990_c1
464 nmdc:mga06z11_39581_c1
465 nmdc:mga04h51_30681_c1
466 nmdc:mga06r32_1299_c1
467 nmdc:mga08y16_40654_c1
468 Ga0500556_0003975
469 Ga0500593_000032
470 Ga0500573_0004416
471 Ga0500573_0181813
472 Ga0501084_0051850
473 Ga0501084_0167893
474 Ga0501082_0014409
475 Ga0501082_0094038
476 2644034239
477 2644090205
478 2644098633
479 2644115994
480 2644320049
481 2738871467
482 2812333601

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00753

Lactamase_B

Metallo-beta-lactamase superfamily

35

235

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
1bmc-assembly1.cif.gz_A structure of a zinc metallo-beta-lactamase from bacillus cereus 0.9077 9 234
1bc2-assembly1.cif.gz_B zn-dependent metallo-beta-lactamase from bacillus cereus 0.905 9 234
2nzf-assembly1.cif.gz_A structure of beta-lactamase ii from bacillus cereus. r121h, c221s double mutant. space group c2. 0.8994 9 234
5ls3-assembly2.cif.gz_A crystal structure of metallo-beta-lactamase spm-1 with y58c mutation 0.8962 9 242
2bga-assembly2.cif.gz_B bacillus cereus metallo-beta-lactamase (bcii) arg (121) cys mutant. solved at ph7 using 20 micromolar znso4 in the buffer. 1mm dtt was used as a reducing agent. cys221 is oxidized. 0.8941 9 234
ID Description Score Start End Superfamily
af_O07720_1_237_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8919 9 239 3.60.15.10
af_O07720_1_237_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8668 9 239 3.60.15.10
4nq7A00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8645 9 234 3.60.15.10
af_O86346_330_578_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8541 8 239 3.60.15.10
1x8gA00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8516 9 235 3.60.15.10
ID Description Score Start End GO Terms
AF-A0A6L6AG62-F1-model_v4 deleted 0.9921 9 288
AF-A0A1I1D6K0-F1-model_v4 Glyoxylase, beta-lactamase superfamily II 0.99 1 239 GO:0016787
GO:0017001
GO:0042597
GO:0046677
GO:0046872
AF-A0A7Y5NID0-F1-model_v4 MBL fold metallo-hydrolase 0.9793 134 278 GO:0016787
AF-A0A7V9PTR9-F1-model_v4 MBL fold metallo-hydrolase 0.9786 8 280 GO:0016787
GO:0017001
GO:0042597
GO:0046677
GO:0046872
AF-A0A132MQE8-F1-model_v4 Metallo-beta-lactamase domain-containing protein 0.975 8 276 GO:0016787
GO:0017001
GO:0042597
GO:0046677
GO:0046872

Map