F353747

General Info

Members Datasets Scaffolds Average Seq Length
241 156 482 438

Family's Representative Sequence

Representative Sequence 3300009176|Ga0105242_10031056|Ga0105242_100310562
Length 490
Sequence MPVIERASGFVPDSTPLTSHPPLRPDFRQCTVAVYHFPAPCCRAMSAIASTPATAAAPLARLLGTLDLALAAIGIVIGSGIFLVPGLVLANAGTDPLVALGVWTAGGLLSFFGALTYAELGAMRPEAGGIYVYIRDAFGPLPAFLYGWSAFFVIATGAVATLAVAFSVYLGQLVPMSPIVSRIVAVGLIAVLATVNVRGTRRSVTLQNYTTIIKVAGLAGLGLLLTVLGNPAAGLTAPAAMISVLWAYEGWQYVTCLAGEARDPQRTFPRAITLALASIALLYIVTNVGYLSAIGPTAVAQSQRVAADALAARVGPAAAGIVSALILVSIVSATNASVLSPPRITFAMARDGVFFASLARVSPRFGTPAFAIVAGSAWAMVGAGTGSFDQLLTYVVFAAWIFYGLGALSLFVYRRREPNAPRPFRVPGYPVTPVLFVAAATALVLNTLVAQPARAAVGLAIVLSGVPAFYWWRRTAAPQPDPSTPTHVPE

Samples

Sample ID Description Type Environment
1 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
43 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
48 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
49 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
50 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
51 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
54 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
75 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
108 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
109 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
110 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
111 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
112 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
113 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
114 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
115 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
116 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
117 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
118 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
119 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
120 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
121 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
122 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
123 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
124 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
125 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
126 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
127 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
128 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
129 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
130 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
131 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
132 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
133 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
134 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
135 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
136 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
137 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
138 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
139 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
140 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
141 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
142 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
143 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
144 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
145 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
146 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
147 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
148 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
149 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
150 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
151 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
152 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
153 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
154 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
155 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
156 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.76
Metatranscriptomes 1.24
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.41
Nodule 0
Rhizoplane 4.98
Rhizosphere 93.78
Stem 0
Stem Tuber 0
Unclassified 18.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105242_10031056 3300009176 Bacteria 4265
2 rootH1_10064914 3300003323 Bacteria 2885
3 Ga0070670_100003538 3300005331 Bacteria 12988
4 Ga0070670_100019613 3300005331 Bacteria 5804
5 Ga0070680_100011351 3300005336 Bacteria 6889
6 Ga0070680_100022128 3300005336 Bacteria 5057
7 Ga0070680_100102988 3300005336 Unclassified 2371
8 Ga0070682_100077794 3300005337 Unclassified 2138
9 Ga0068868_100128036 3300005338 Unclassified 2076
10 Ga0070660_100062383 3300005339 Bacteria 2895
11 Ga0070669_100093030 3300005353 Bacteria 2264
12 Ga0070673_100009500 3300005364 Bacteria 6530
13 Ga0070659_100004597 3300005366 Bacteria 9870
14 Ga0070667_100004110 3300005367 Bacteria 12322
15 Ga0070709_10019697 3300005434 Unclassified 3904
16 Ga0070714_100000866 3300005435 Bacteria 21455
17 Ga0070714_100066214 3300005435 Bacteria 3113
18 Ga0070713_100018917 3300005436 Bacteria 5245
19 Ga0070711_100008579 3300005439 Bacteria 6267
20 Ga0070708_100002427 3300005445 Bacteria 14447
21 Ga0070708_100002919 3300005445 Bacteria 13293
22 Ga0070708_100031029 3300005445 Bacteria 4623
23 Ga0070708_100113438 3300005445 Unclassified 2493
24 Ga0070708_100161039 3300005445 Unclassified 2091
25 Ga0070663_100013301 3300005455 Bacteria 5242
26 Ga0070662_100002809 3300005457 Bacteria 10792
27 Ga0070681_10002059 3300005458 Bacteria 18237
28 Ga0070681_10029936 3300005458 Bacteria 5464
29 Ga0070681_10109414 3300005458 Bacteria 2703
30 Ga0068867_100035287 3300005459 Bacteria 3627
31 Ga0070685_10076505 3300005466 Bacteria 1996
32 Ga0070706_100003294 3300005467 Bacteria 15973
33 Ga0070706_100015369 3300005467 Bacteria 7069
34 Ga0070706_100061372 3300005467 Bacteria 3471
35 Ga0070706_100064085 3300005467 Bacteria 3397
36 Ga0070707_100004579 3300005468 Bacteria 12947
37 Ga0070707_100026795 3300005468 Bacteria 5475
38 Ga0070707_100075996 3300005468 Unclassified 3240
39 Ga0070698_100004502 3300005471 Bacteria 15322
40 Ga0070698_100022895 3300005471 Bacteria 6532
41 Ga0070699_100003677 3300005518 Bacteria 13583
42 Ga0070699_100147534 3300005518 Unclassified 2079
43 Ga0070679_100119771 3300005530 Unclassified 2617
44 Ga0070684_100119944 3300005535 Bacteria 2366
45 Ga0070684_100231754 3300005535 Unclassified 1686
46 Ga0070697_100001646 3300005536 Bacteria 17009
47 Ga0070697_100006877 3300005536 Bacteria 8837
48 Ga0070697_100085491 3300005536 Bacteria 2602
49 Ga0070697_100234588 3300005536 Unclassified 1566
50 Ga0068853_100096581 3300005539 Bacteria 2607
51 Ga0070695_100160475 3300005545 Bacteria 1577
52 Ga0070696_100006796 3300005546 Bacteria 7640
53 Ga0070696_100103897 3300005546 Unclassified 2039
54 Ga0070665_100091857 3300005548 Bacteria 3040
55 Ga0068855_100029014 3300005563 Bacteria 6617
56 Ga0070664_100034609 3300005564 Bacteria 4237
57 Ga0068856_100050713 3300005614 Bacteria 4091
58 Ga0068856_100122043 3300005614 Unclassified 2608
59 Ga0068852_100010185 3300005616 Bacteria 7008
60 Ga0068859_100022979 3300005617 Bacteria 6253
61 Ga0068859_100192425 3300005617 Bacteria 2124
62 Ga0068864_100009890 3300005618 Bacteria 7866
63 Ga0068858_100002079 3300005842 Bacteria 20356
64 Ga0068860_100011935 3300005843 Bacteria 8563
65 Ga0068860_100098358 3300005843 Bacteria 2790
66 Ga0068862_100030767 3300005844 Bacteria 4525
67 Ga0070717_10143949 3300006028 Bacteria 2058
68 Ga0070716_100154211 3300006173 Bacteria 1481
69 Ga0097621_100018842 3300006237 Bacteria 5283
70 Ga0097621_100144697 3300006237 Bacteria 2034
71 Ga0068871_100016919 3300006358 Bacteria 5505
72 Ga0075428_100006496 3300006844 Bacteria 12995
73 Ga0075430_100090732 3300006846 Bacteria 2556
74 Ga0075431_100286903 3300006847 Unclassified 1666
75 Ga0075433_10001526 3300006852 Bacteria 17097
76 Ga0075434_100000123 3300006871 Bacteria 45651
77 Ga0075434_100026386 3300006871 Bacteria 5691
78 Ga0075436_100009336 3300006914 Bacteria 6708
79 Ga0075436_100009364 3300006914 Bacteria 6697
80 Ga0097620_100022980 3300006931 Bacteria 6253
81 Ga0097620_100192426 3300006931 Bacteria 2124
82 Ga0075435_100008913 3300007076 Bacteria 7230
83 Ga0099794_10036945 3300007265 Bacteria 2311
84 Ga0105240_10000616 3300009093 Bacteria 65942
85 Ga0105240_10018199 3300009093 Bacteria 9444
86 Ga0105240_10036593 3300009093 Bacteria 6312
87 Ga0105241_10014363 3300009174 Bacteria 5799
88 Ga0105242_10021098 3300009176 Bacteria 5112
89 Ga0105242_10057208 3300009176 Bacteria 3192
90 Ga0105248_10006415 3300009177 Bacteria 12905
91 Ga0105248_10072002 3300009177 Bacteria 3884
92 Ga0105248_10345580 3300009177 Unclassified 1675
93 Ga0105237_10005000 3300009545 Bacteria 15098
94 Ga0105237_10167142 3300009545 Bacteria 2199
95 Ga0105238_10166326 3300009551 Unclassified 2181
96 Ga0105249_10004749 3300009553 Bacteria 11725
97 Ga0105249_10203688 3300009553 Bacteria 1938
98 Ga0105239_10223960 3300010375 Unclassified 2109
99 Ga0157373_10037170 3300013100 Bacteria 3492
100 Ga0157373_10058385 3300013100 Bacteria 2736
101 Ga0157371_10006414 3300013102 Bacteria 9715
102 Ga0157370_10011672 3300013104 Bacteria 9171
103 Ga0157370_10039135 3300013104 Bacteria 4583
104 Ga0157369_10002480 3300013105 Bacteria 22116
105 Ga0157369_10036780 3300013105 Bacteria 5362
106 Ga0157369_10101584 3300013105 Bacteria 3065
107 Ga0157374_10041188 3300013296 Unclassified 4255
108 Ga0157374_10050905 3300013296 Unclassified 3852
109 Ga0157378_10014975 3300013297 Bacteria 6790
110 Ga0157378_10107615 3300013297 Bacteria 2552
111 Ga0163162_10005578 3300013306 Bacteria 12175
112 Ga0163162_10006992 3300013306 Bacteria 10945
113 Ga0163162_10009890 3300013306 Bacteria 9274
114 Ga0157372_10010815 3300013307 Bacteria 9714
115 Ga0157372_10029096 3300013307 Bacteria 6029
116 Ga0157372_10030986 3300013307 Bacteria 5854
117 Ga0157372_10130215 3300013307 Bacteria 2894
118 Ga0157375_10024807 3300013308 Bacteria 5557
119 Ga0157375_10088434 3300013308 Bacteria 3153
120 Ga0157375_10158281 3300013308 Bacteria 2405
121 Ga0163163_10023440 3300014325 Bacteria 5859
122 Ga0163163_10049953 3300014325 Bacteria 4117
123 Ga0157379_10052007 3300014968 Bacteria 3658
124 Ga0157379_10105147 3300014968 Bacteria 2534
125 Ga0157376_10036692 3300014969 Unclassified 3973
126 Ga0157376_10059118 3300014969 Bacteria 3214
127 Ga0224572_1000777 3300024225 Bacteria 4198
128 Ga0207647_10004171 3300025904 Bacteria 10717
129 Ga0207699_10141083 3300025906 Unclassified 1584
130 Ga0207684_10002652 3300025910 Bacteria 17907
131 Ga0207684_10031047 3300025910 Bacteria 4547
132 Ga0207684_10188118 3300025910 Unclassified 1780
133 Ga0207654_10037098 3300025911 Unclassified 2727
134 Ga0207654_10109402 3300025911 Bacteria 1717
135 Ga0207707_10008801 3300025912 Bacteria 8760
136 Ga0207707_10204077 3300025912 Bacteria 1723
137 Ga0207695_10002709 3300025913 Bacteria 25848
138 Ga0207695_10204639 3300025913 Bacteria 1887
139 Ga0207671_10043533 3300025914 Unclassified 3320
140 Ga0207663_10013189 3300025916 Unclassified 4486
141 Ga0207660_10022628 3300025917 Bacteria 4235
142 Ga0207657_10012381 3300025919 Bacteria 8427
143 Ga0207646_10004465 3300025922 Bacteria 15169
144 Ga0207646_10026052 3300025922 Bacteria 5344
145 Ga0207646_10067380 3300025922 Unclassified 3196
146 Ga0207646_10147550 3300025922 Unclassified 2120
147 Ga0207646_10237927 3300025922 Bacteria 1645
148 Ga0207681_10025246 3300025923 Bacteria 3821
149 Ga0207650_10027237 3300025925 Bacteria 4089
150 Ga0207664_10043082 3300025929 Bacteria 3528
151 Ga0207664_10048563 3300025929 Unclassified 3338
152 Ga0207706_10003473 3300025933 Bacteria 15041
153 Ga0207686_10046840 3300025934 Unclassified 2669
154 Ga0207709_10028145 3300025935 Bacteria 3246
155 Ga0207704_10080353 3300025938 Bacteria 2105
156 Ga0207665_10038958 3300025939 Bacteria 3167
157 Ga0207691_10015921 3300025940 Bacteria 7143
158 Ga0207689_10001816 3300025942 Bacteria 20159
159 Ga0207679_10013952 3300025945 Bacteria 5269
160 Ga0207667_10006069 3300025949 Bacteria 14691
161 Ga0207667_10076690 3300025949 Bacteria 3468
162 Ga0207712_10004428 3300025961 Bacteria 8875
163 Ga0207677_10089412 3300026023 Unclassified 2236
164 Ga0207703_10001518 3300026035 Bacteria 21118
165 Ga0207702_10007236 3300026078 Bacteria 9495
166 Ga0207702_10040781 3300026078 Unclassified 3892
167 Ga0207641_10097727 3300026088 Unclassified 2581
168 Ga0207641_10180940 3300026088 Bacteria 1931
169 Ga0207648_10020013 3300026089 Bacteria 6037
170 Ga0207676_10007960 3300026095 Bacteria 7535
171 Ga0207674_10026435 3300026116 Bacteria 6163
172 Ga0207698_10171679 3300026142 Bacteria 1910
173 Ga0265356_1000564 3300028017 Bacteria 6568
174 Ga0265338_10010900 3300028800 Bacteria 10577
175 Ga0265762_1000046 3300030760 Bacteria 14833
176 Ga0265760_10000096 3300031090 Bacteria 22944
177 Ga0265760_10004308 3300031090 Bacteria 4084
178 Ga0265316_10000949 3300031344 Bacteria 31606
179 Ga0265314_10000699 3300031711 Bacteria 40640
180 Ga0307415_100102637 3300032126 Bacteria 2102
181 Ga0373936_0000796 3300035113 Bacteria 11164
182 Ga0373953_0035881 3300035117 Bacteria 1950
183 Ga0373956_0006923 3300035119 Bacteria 4555
184 Ga0373943_0000201 3300035170 Bacteria 24360
185 Ga0373946_0001047 3300035171 Bacteria 9510
186 Ga0373931_0018675 3300035691 Bacteria 3449
187 Ga0373927_0000486 3300035695 Bacteria 30592
188 Ga0373927_0001462 3300035695 Bacteria 17816
189 Ga0373927_0113139 3300035695 Unclassified 1769
190 Ga0373933_0006949 3300035724 Bacteria 6169
191 Ga0373933_0151105 3300035724 Bacteria 1471
192 Ga0373947_0023131 3300035725 Bacteria 3612
193 Ga0373937_0022481 3300036401 Bacteria 5670
194 Ga0373937_0191092 3300036401 Unclassified 1924
195 Ga0373925_0000773 3300037068 Bacteria 29397
196 Ga0395898_0054461 3300037466 Bacteria 3904
197 Ga0436364_1342615 3300037853 Bacteria 2987
198 Ga0453684_0176312 3300044712 Unclassified 2514
199 Ga0466967_0093949 3300045976 Unclassified 2730
200 Ga0466967_0266821 3300045976 Bacteria 1639
201 Ga0495651_0004934 3300046462 Bacteria 10200
202 Ga0495580_0002362 3300046472 Bacteria 16477
203 Ga0495580_0008170 3300046472 Bacteria 8334
204 Ga0495580_0014259 3300046472 Bacteria 6033
205 Ga0495580_0029031 3300046472 Bacteria 4017
206 Ga0495580_0063603 3300046472 Unclassified 2587
207 Ga0495582_0068587 3300046473 Bacteria 1960
208 Ga0495664_0031606 3300046477 Bacteria 3104
209 Ga0495594_0005655 3300046499 Bacteria 6429
210 Ga0495630_0218843 3300046517 Bacteria 1454
211 Ga0495642_0026476 3300046528 Bacteria 2304
212 Ga0495645_0025507 3300046543 Unclassified 4290
213 Ga0495645_0055832 3300046543 Bacteria 2867
214 Ga0495635_0061812 3300046663 Unclassified 2572
215 Ga0495599_0141196 3300046678 Bacteria 1494
216 Ga0495623_0018310 3300046679 Bacteria 4524
217 Ga0495623_0041708 3300046679 Bacteria 2926
218 Ga0495669_0059690 3300046684 Bacteria 1723
219 Ga0495674_0006176 3300047319 Bacteria 11493
220 Ga0495674_0035999 3300047319 Unclassified 4460
221 Ga0495672_0037005 3300047320 Bacteria 2991
222 Ga0495684_0110756 3300047471 Bacteria 2072
223 Ga0496100_0112687 3300048903 Unclassified 1892
224 Ga0496101_0047921 3300048904 Unclassified 3069
225 Ga0496104_0049855 3300048907 Unclassified 3949
226 Ga0496109_0092071 3300048912 Bacteria 2804
227 Ga0496109_0112347 3300048912 Bacteria 2533
228 Ga0496112_0000854 3300048915 Bacteria 21742
229 Ga0496112_0025686 3300048915 Bacteria 5658
230 Ga0496112_0135250 3300048915 Unclassified 2435
231 Ga0496112_0238736 3300048915 Bacteria 1771
232 Ga0496113_0000422 3300048916 Bacteria 20604
233 Ga0496114_0067834 3300048917 Unclassified 2993
234 Ga0496115_0020511 3300048918 Bacteria 5099
235 nmdc:mga0qj67_141464_c1 3300050509 Bacteria 1951
236 nmdc:mga0n895_194_c1 3300050512 Bacteria 37839
237 nmdc:mga0n895_24100_c1 3300050512 Bacteria 5730
238 nmdc:mga0rr50_3110_c1 3300050513 Bacteria 9486
239 nmdc:mga0a205_14339_c1 3300050515 Bacteria 7390
240 nmdc:mga0a205_1531_c1 3300050515 Bacteria 19758
241 Ga0500568_0009506 3300053139 Bacteria 4610
242 Ga0105242_10031056
243 rootH1_10064914
244 Ga0070670_100003538
245 Ga0070670_100019613
246 Ga0070680_100011351
247 Ga0070680_100022128
248 Ga0070680_100102988
249 Ga0070682_100077794
250 Ga0068868_100128036
251 Ga0070660_100062383
252 Ga0070669_100093030
253 Ga0070673_100009500
254 Ga0070659_100004597
255 Ga0070667_100004110
256 Ga0070709_10019697
257 Ga0070714_100000866
258 Ga0070714_100066214
259 Ga0070713_100018917
260 Ga0070711_100008579
261 Ga0070708_100002427
262 Ga0070708_100002919
263 Ga0070708_100031029
264 Ga0070708_100113438
265 Ga0070708_100161039
266 Ga0070663_100013301
267 Ga0070662_100002809
268 Ga0070681_10002059
269 Ga0070681_10029936
270 Ga0070681_10109414
271 Ga0068867_100035287
272 Ga0070685_10076505
273 Ga0070706_100003294
274 Ga0070706_100015369
275 Ga0070706_100061372
276 Ga0070706_100064085
277 Ga0070707_100004579
278 Ga0070707_100026795
279 Ga0070707_100075996
280 Ga0070698_100004502
281 Ga0070698_100022895
282 Ga0070699_100003677
283 Ga0070699_100147534
284 Ga0070679_100119771
285 Ga0070684_100119944
286 Ga0070684_100231754
287 Ga0070697_100001646
288 Ga0070697_100006877
289 Ga0070697_100085491
290 Ga0070697_100234588
291 Ga0068853_100096581
292 Ga0070695_100160475
293 Ga0070696_100006796
294 Ga0070696_100103897
295 Ga0070665_100091857
296 Ga0068855_100029014
297 Ga0070664_100034609
298 Ga0068856_100050713
299 Ga0068856_100122043
300 Ga0068852_100010185
301 Ga0068859_100022979
302 Ga0068859_100192425
303 Ga0068864_100009890
304 Ga0068858_100002079
305 Ga0068860_100011935
306 Ga0068860_100098358
307 Ga0068862_100030767
308 Ga0070717_10143949
309 Ga0070716_100154211
310 Ga0097621_100018842
311 Ga0097621_100144697
312 Ga0068871_100016919
313 Ga0075428_100006496
314 Ga0075430_100090732
315 Ga0075431_100286903
316 Ga0075433_10001526
317 Ga0075434_100000123
318 Ga0075434_100026386
319 Ga0075436_100009336
320 Ga0075436_100009364
321 Ga0097620_100022980
322 Ga0097620_100192426
323 Ga0075435_100008913
324 Ga0099794_10036945
325 Ga0105240_10000616
326 Ga0105240_10018199
327 Ga0105240_10036593
328 Ga0105241_10014363
329 Ga0105242_10021098
330 Ga0105242_10057208
331 Ga0105248_10006415
332 Ga0105248_10072002
333 Ga0105248_10345580
334 Ga0105237_10005000
335 Ga0105237_10167142
336 Ga0105238_10166326
337 Ga0105249_10004749
338 Ga0105249_10203688
339 Ga0105239_10223960
340 Ga0157373_10037170
341 Ga0157373_10058385
342 Ga0157371_10006414
343 Ga0157370_10011672
344 Ga0157370_10039135
345 Ga0157369_10002480
346 Ga0157369_10036780
347 Ga0157369_10101584
348 Ga0157374_10041188
349 Ga0157374_10050905
350 Ga0157378_10014975
351 Ga0157378_10107615
352 Ga0163162_10005578
353 Ga0163162_10006992
354 Ga0163162_10009890
355 Ga0157372_10010815
356 Ga0157372_10029096
357 Ga0157372_10030986
358 Ga0157372_10130215
359 Ga0157375_10024807
360 Ga0157375_10088434
361 Ga0157375_10158281
362 Ga0163163_10023440
363 Ga0163163_10049953
364 Ga0157379_10052007
365 Ga0157379_10105147
366 Ga0157376_10036692
367 Ga0157376_10059118
368 Ga0224572_1000777
369 Ga0207647_10004171
370 Ga0207699_10141083
371 Ga0207684_10002652
372 Ga0207684_10031047
373 Ga0207684_10188118
374 Ga0207654_10037098
375 Ga0207654_10109402
376 Ga0207707_10008801
377 Ga0207707_10204077
378 Ga0207695_10002709
379 Ga0207695_10204639
380 Ga0207671_10043533
381 Ga0207663_10013189
382 Ga0207660_10022628
383 Ga0207657_10012381
384 Ga0207646_10004465
385 Ga0207646_10026052
386 Ga0207646_10067380
387 Ga0207646_10147550
388 Ga0207646_10237927
389 Ga0207681_10025246
390 Ga0207650_10027237
391 Ga0207664_10043082
392 Ga0207664_10048563
393 Ga0207706_10003473
394 Ga0207686_10046840
395 Ga0207709_10028145
396 Ga0207704_10080353
397 Ga0207665_10038958
398 Ga0207691_10015921
399 Ga0207689_10001816
400 Ga0207679_10013952
401 Ga0207667_10006069
402 Ga0207667_10076690
403 Ga0207712_10004428
404 Ga0207677_10089412
405 Ga0207703_10001518
406 Ga0207702_10007236
407 Ga0207702_10040781
408 Ga0207641_10097727
409 Ga0207641_10180940
410 Ga0207648_10020013
411 Ga0207676_10007960
412 Ga0207674_10026435
413 Ga0207698_10171679
414 Ga0265356_1000564
415 Ga0265338_10010900
416 Ga0265762_1000046
417 Ga0265760_10000096
418 Ga0265760_10004308
419 Ga0265316_10000949
420 Ga0265314_10000699
421 Ga0307415_100102637
422 Ga0373936_0000796
423 Ga0373953_0035881
424 Ga0373956_0006923
425 Ga0373943_0000201
426 Ga0373946_0001047
427 Ga0373931_0018675
428 Ga0373927_0000486
429 Ga0373927_0001462
430 Ga0373927_0113139
431 Ga0373933_0006949
432 Ga0373933_0151105
433 Ga0373947_0023131
434 Ga0373937_0022481
435 Ga0373937_0191092
436 Ga0373925_0000773
437 Ga0395898_0054461
438 Ga0436364_1342615
439 Ga0453684_0176312
440 Ga0466967_0093949
441 Ga0466967_0266821
442 Ga0495651_0004934
443 Ga0495580_0002362
444 Ga0495580_0008170
445 Ga0495580_0014259
446 Ga0495580_0029031
447 Ga0495580_0063603
448 Ga0495582_0068587
449 Ga0495664_0031606
450 Ga0495594_0005655
451 Ga0495630_0218843
452 Ga0495642_0026476
453 Ga0495645_0025507
454 Ga0495645_0055832
455 Ga0495635_0061812
456 Ga0495599_0141196
457 Ga0495623_0018310
458 Ga0495623_0041708
459 Ga0495669_0059690
460 Ga0495674_0006176
461 Ga0495674_0035999
462 Ga0495672_0037005
463 Ga0495684_0110756
464 Ga0496100_0112687
465 Ga0496101_0047921
466 Ga0496104_0049855
467 Ga0496109_0092071
468 Ga0496109_0112347
469 Ga0496112_0000854
470 Ga0496112_0025686
471 Ga0496112_0135250
472 Ga0496112_0238736
473 Ga0496113_0000422
474 Ga0496114_0067834
475 Ga0496115_0020511
476 nmdc:mga0qj67_141464_c1
477 nmdc:mga0n895_194_c1
478 nmdc:mga0n895_24100_c1
479 nmdc:mga0rr50_3110_c1
480 nmdc:mga0a205_14339_c1
481 nmdc:mga0a205_1531_c1
482 Ga0500568_0009506

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13520

AA_permease_2

Amino acid permease

63

469

0.85

PF00324

AA_permease

Amino acid permease

67

479

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
7dsk-assembly1.cif.gz_B overall structure of the lat1-4f2hc bound with jx-075 0.8854 6 421
7dsk-assembly1.cif.gz_B overall structure of the lat1-4f2hc bound with jx-075 0.8483 6 421
5j4i-assembly1.cif.gz_A crystal structure of the l-arginine/agmatine antiporter from e. coli at 2.2 angstroem resolution 0.8477 9 420
6f2g-assembly1.cif.gz_A bacterial asc transporter crystal structure in open to in conformation 0.8462 16 424
6irt-assembly1.cif.gz_B human lat1-4f2hc complex bound with bch 0.8368 16 421
ID Description Score Start End Superfamily
af_Q2FYJ4_6_440_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9102 6 426 1.20.1740.10
af_D4ADU2_38_483_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9039 7 421 1.20.1740.10
af_Q19151_16_462_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.897 5 421 1.20.1740.10
af_P45539_5_443_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8968 6 429 1.20.1740.10
af_Q5RKI7_10_447_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8856 7 425 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A7W8IX14-F1-model_v4 deleted 0.9464 11 426
AF-A0A2V8RFG1-F1-model_v4 Amino acid permease 0.9405 1 424 GO:0005886
GO:0015179
AF-A0A7Y4XBB4-F1-model_v4 APC family permease 0.9369 7 341 GO:0005886
GO:0015179
AF-A0A7V1ULB2-F1-model_v4 Amino acid permease 0.9334 2 425 GO:0005886
GO:0015179
AF-A0A7V8SYY9-F1-model_v4 Amino acid permease 0.9324 153 434 GO:0005886
GO:0015179

Map