F352580

General Info

Members Datasets Scaffolds Average Seq Length
240 156 238 837

Family's Representative Sequence

Representative Sequence 3300005353|Ga0070669_100014527|Ga0070669_1000145273
Length 922
Sequence MSGNQDWRRDMSPADRAYRVLLRLYPREFRQRFGSDMVDFFRDRRLAARRTSGTLGIARAWARAIADVIGIAAIERAGSVARALRAVLDSWHDEPSRITFDSRNEDMMATLAGDIRYALRGMMTKRAFSAVVLATLALGIGANVAIFSVVDGVLLRPLPYPDADRVVQVTHRSPYSTVSEPEFVDYRNGAKRFERLAAFTTTSGTLTGDRDPERVTVTRVSDGFFSILKVPAAIGRTFVPEEDRRHGMPRRAAVLSHALWTRRYGGDTSLVGKEIRINDISVTVVGVMPERFDFPSSETAMWTPLRLNYDTLWTRNNHYLQMIARLTPGATAEGATAELNTLAKQFVRDYPAVYGQNEPLVATVTPLPDQLLGKTRPYLLALLGAVGFVLLIACVNVANLLLARGEARRKELAIRTALGASRGRLARQVLTESALYAIAGGALGVALAWWGQQLLRAAAPASIPRLEEVSINGGVLVFALVVTTLTGVLFGLIPALRGSRGDAIRSLREGGKTSSQFGIGRARGVLVVSEVALAVVLLTGAGLMVRSLWKLQSMELGINPENVLTMSVSYPEPRVALDDPAGPQRVIAQFYQDLTTRVGALPGVRSVGAVGALPIADCCSMWSILVDGSPMVPVSQSPSAMPQQVTPGYFRTMGIAVLRGREFTEGDRDDAPLVAIVNETAAKKLWPGKSPIGGTIKMLNDTSPWATVVGVVKDVRSQGYQQDVESTMYFPHAQAGKSAYYTPAAMNLVIKTDGDPTALAAPVRNIVRQLSAVTPVSRVQTMEQVVAASVASRRFSTQLLAGFASLALLLAGLGIYGVIAYDVSQRTHEIGLRMALGARGGQVAGMMLSRGVRLVAIGLAIGVAGSLAVTGVLQSLLVDVSRLDPLTLGGVVVVLGLVAAGAAYVPARRASSVDPMVALRRD

Samples

Sample ID Description Type Environment
1 3300000532 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_Assembled Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
45 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
46 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
47 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
48 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
51 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
52 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
53 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
56 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
57 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
60 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
62 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
65 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
66 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
67 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
68 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
69 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
78 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
79 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
107 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
110 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
111 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
112 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
113 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
114 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
115 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
116 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
117 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
118 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
119 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
120 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
121 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
122 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
123 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
124 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
125 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
126 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
127 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
128 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
129 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
130 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
131 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
132 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
133 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
134 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
135 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
136 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
137 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
138 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
139 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
140 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
141 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
142 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
143 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
144 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
145 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
148 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
153 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
154 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
155 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
156 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.58
Metatranscriptomes 0.42
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.5
Nodule 0
Rhizoplane 0.42
Rhizosphere 94.58
Stem 0
Stem Tuber 0
Unclassified 2.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 CNAas_1000199 3300000532 Bacteria 5556
2 JGI25406J46586_10006646 3300003203 Bacteria 5314
3 Ga0065712_10069197 3300005290 Bacteria 7759
4 Ga0065712_10074586 3300005290 Bacteria 4056
5 Ga0065715_10002539 3300005293 Bacteria 7330
6 Ga0070658_10017964 3300005327 Bacteria 5657
7 Ga0070683_100012439 3300005329 Bacteria 7396
8 Ga0070683_100029856 3300005329 Bacteria 4942
9 Ga0070683_100046396 3300005329 Bacteria 4014
10 Ga0070670_100022706 3300005331 Bacteria 5398
11 Ga0070670_100043897 3300005331 Bacteria 3843
12 Ga0068869_100038755 3300005334 Bacteria 3399
13 Ga0070666_10019692 3300005335 Bacteria 4359
14 Ga0070680_100031416 3300005336 Bacteria 4270
15 Ga0070668_100010884 3300005347 Bacteria 6769
16 Ga0070669_100014527 3300005353 Bacteria 5600
17 Ga0070675_100062746 3300005354 Bacteria 3071
18 Ga0070673_100037779 3300005364 Bacteria 3681
19 Ga0070703_10000017 3300005406 Bacteria 80348
20 Ga0070703_10007664 3300005406 Bacteria 3034
21 Ga0070709_10000006 3300005434 Bacteria 186534
22 Ga0070709_10021019 3300005434 Bacteria 3798
23 Ga0070713_100009828 3300005436 Bacteria 6879
24 Ga0070700_100011583 3300005441 Bacteria 4888
25 Ga0070694_100011136 3300005444 Bacteria 5569
26 Ga0070694_100016474 3300005444 Bacteria 4651
27 Ga0070708_100002307 3300005445 Bacteria 14779
28 Ga0070708_100031584 3300005445 Unclassified 4585
29 Ga0070708_100046055 3300005445 Bacteria 3846
30 Ga0070681_10020687 3300005458 Bacteria 6592
31 Ga0070706_100000085 3300005467 Bacteria 108868
32 Ga0070706_100001572 3300005467 Bacteria 23838
33 Ga0070706_100028296 3300005467 Bacteria 5160
34 Ga0070707_100000919 3300005468 Bacteria 29204
35 Ga0070698_100000172 3300005471 Bacteria 60229
36 Ga0070698_100001611 3300005471 Bacteria 25109
37 Ga0070698_100010046 3300005471 Bacteria 10108
38 Ga0070698_100089067 3300005471 Bacteria 3070
39 Ga0070699_100010713 3300005518 Bacteria 7933
40 Ga0070699_100030145 3300005518 Unclassified 4681
41 Ga0070699_100049338 3300005518 Bacteria 3643
42 Ga0070679_100003365 3300005530 Bacteria 14650
43 Ga0070697_100000287 3300005536 Bacteria 40901
44 Ga0070697_100000530 3300005536 Bacteria 28718
45 Ga0070697_100006395 3300005536 Bacteria 9120
46 Ga0070697_100020807 3300005536 Bacteria 5195
47 Ga0068853_100037184 3300005539 Unclassified 4141
48 Ga0070695_100019195 3300005545 Unclassified 4159
49 Ga0070665_100011725 3300005548 Bacteria 8857
50 Ga0070704_100049797 3300005549 Bacteria 2941
51 Ga0068855_100011346 3300005563 Bacteria 10756
52 Ga0068857_100003782 3300005577 Bacteria 12726
53 Ga0068857_100025107 3300005577 Bacteria 5248
54 Ga0068852_100010643 3300005616 Bacteria 6884
55 Ga0068859_100029125 3300005617 Bacteria 5541
56 Ga0068859_100048352 3300005617 Bacteria 4273
57 Ga0068864_100005165 3300005618 Bacteria 10693
58 Ga0068864_100018623 3300005618 Bacteria 5803
59 Ga0068861_100012121 3300005719 Bacteria 6008
60 Ga0068861_100014774 3300005719 Bacteria 5486
61 Ga0068851_10005014 3300005834 Bacteria 6000
62 Ga0068863_100012744 3300005841 Bacteria 8108
63 Ga0068858_100012314 3300005842 Bacteria 8067
64 Ga0068860_100004526 3300005843 Bacteria 14189
65 Ga0068860_100011268 3300005843 Bacteria 8810
66 Ga0068860_100023630 3300005843 Bacteria 5940
67 Ga0068862_100008559 3300005844 Bacteria 8465
68 Ga0081539_10000130 3300005985 Bacteria 178299
69 Ga0081539_10003585 3300005985 Bacteria 18819
70 Ga0075365_10025384 3300006038 Bacteria 3750
71 Ga0075364_10013881 3300006051 Bacteria 4965
72 Ga0070716_100009885 3300006173 Unclassified 4768
73 Ga0075367_10002279 3300006178 Bacteria 8700
74 Ga0075366_10020683 3300006195 Bacteria 3820
75 Ga0097621_100003815 3300006237 Bacteria 10443
76 Ga0075370_10038997 3300006353 Bacteria 2675
77 Ga0068871_100049438 3300006358 Unclassified 3399
78 Ga0075428_100033546 3300006844 Bacteria 5667
79 Ga0075428_100037063 3300006844 Bacteria 5371
80 Ga0075428_100067239 3300006844 Bacteria 3923
81 Ga0075430_100011781 3300006846 Bacteria 7443
82 Ga0075430_100039001 3300006846 Unclassified 4023
83 Ga0075430_100082579 3300006846 Bacteria 2693
84 Ga0075431_100025225 3300006847 Bacteria 6095
85 Ga0075431_100025391 3300006847 Bacteria 6074
86 Ga0075431_100028356 3300006847 Bacteria 5752
87 Ga0075431_100129262 3300006847 Bacteria 2606
88 Ga0075434_100014852 3300006871 Bacteria 7450
89 Ga0075434_100044448 3300006871 Bacteria 4407
90 Ga0075429_100006111 3300006880 Bacteria 10409
91 Ga0097620_100029125 3300006931 Bacteria 5541
92 Ga0097620_100048351 3300006931 Bacteria 4273
93 Ga0111539_10021205 3300009094 Bacteria 8002
94 Ga0111539_10097948 3300009094 Bacteria 3445
95 Ga0111539_10101433 3300009094 Bacteria 3379
96 Ga0105245_10087815 3300009098 Bacteria 2855
97 Ga0114129_10047538 3300009147 Bacteria 6029
98 Ga0114129_10119089 3300009147 Bacteria 3637
99 Ga0105243_10000120 3300009148 Bacteria 90809
100 Ga0105242_10000008 3300009176 Bacteria 172348
101 Ga0105248_10008590 3300009177 Bacteria 11217
102 Ga0105248_10049344 3300009177 Bacteria 4721
103 Ga0105248_10053163 3300009177 Bacteria 4545
104 Ga0105237_10001369 3300009545 Bacteria 32161
105 Ga0105238_10036290 3300009551 Bacteria 5010
106 Ga0105249_10003479 3300009553 Bacteria 13642
107 Ga0105249_10019949 3300009553 Bacteria 5985
108 Ga0105249_10028043 3300009553 Bacteria 5082
109 Ga0105246_10013363 3300011119 Bacteria 5145
110 Ga0157373_10012935 3300013100 Bacteria 6127
111 Ga0157370_10008646 3300013104 Bacteria 10957
112 Ga0157369_10001481 3300013105 Bacteria 28793
113 Ga0157369_10066698 3300013105 Bacteria 3871
114 Ga0157378_10011462 3300013297 Bacteria 7758
115 Ga0163162_10030313 3300013306 Bacteria 5360
116 Ga0163162_10042083 3300013306 Bacteria 4571
117 Ga0157372_10047353 3300013307 Bacteria 4778
118 Ga0157375_10125205 3300013308 Bacteria 2684
119 Ga0163163_10030608 3300014325 Bacteria 5187
120 Ga0157380_10013276 3300014326 Bacteria 6001
121 Ga0157376_10013522 3300014969 Bacteria 6093
122 Ga0213876_10000062 3300021384 Bacteria 128625
123 Ga0213876_10000109 3300021384 Bacteria 90784
124 Ga0213876_10000592 3300021384 Bacteria 26961
125 Ga0207697_10000638 3300025315 Bacteria 19975
126 Ga0207697_10004274 3300025315 Bacteria 6851
127 Ga0207656_10001463 3300025321 Bacteria 7826
128 Ga0207653_10000066 3300025885 Bacteria 80383
129 Ga0207699_10000003 3300025906 Bacteria 577076
130 Ga0207699_10027615 3300025906 Bacteria 3144
131 Ga0207645_10007821 3300025907 Bacteria 7518
132 Ga0207645_10009041 3300025907 Bacteria 6915
133 Ga0207684_10000091 3300025910 Bacteria 170468
134 Ga0207684_10013066 3300025910 Bacteria 7187
135 Ga0207684_10013870 3300025910 Bacteria 6960
136 Ga0207707_10037352 3300025912 Bacteria 4245
137 Ga0207671_10012147 3300025914 Bacteria 6950
138 Ga0207649_10005616 3300025920 Bacteria 6784
139 Ga0207646_10000977 3300025922 Bacteria 36797
140 Ga0207646_10031183 3300025922 Unclassified 4827
141 Ga0207650_10006279 3300025925 Bacteria 8096
142 Ga0207700_10031627 3300025928 Bacteria 3762
143 Ga0207644_10029124 3300025931 Bacteria 3828
144 Ga0207706_10000409 3300025933 Bacteria 46145
145 Ga0207686_10000023 3300025934 Bacteria 172422
146 Ga0207709_10000062 3300025935 Bacteria 194534
147 Ga0207670_10025571 3300025936 Bacteria 3707
148 Ga0207665_10006998 3300025939 Bacteria 7465
149 Ga0207691_10012664 3300025940 Bacteria 8077
150 Ga0207711_10008408 3300025941 Bacteria 8631
151 Ga0207711_10042917 3300025941 Bacteria 3855
152 Ga0207661_10014930 3300025944 Bacteria 5702
153 Ga0207661_10023287 3300025944 Bacteria 4677
154 Ga0207679_10008828 3300025945 Bacteria 6425
155 Ga0207679_10012847 3300025945 Bacteria 5475
156 Ga0207712_10008080 3300025961 Bacteria 6656
157 Ga0207678_10015707 3300026067 Bacteria 6653
158 Ga0207641_10000700 3300026088 Bacteria 36107
159 Ga0207674_10007391 3300026116 Bacteria 12798
160 Ga0207674_10007775 3300026116 Bacteria 12472
161 Ga0207674_10016875 3300026116 Bacteria 7978
162 Ga0207674_10027724 3300026116 Bacteria 5986
163 Ga0207675_100002226 3300026118 Bacteria 19271
164 Ga0207675_100002926 3300026118 Bacteria 16793
165 Ga0207675_100013980 3300026118 Bacteria 7484
166 Ga0207675_100037777 3300026118 Bacteria 4504
167 Ga0207675_100051996 3300026118 Bacteria 3823
168 Ga0207428_10014399 3300027907 Bacteria 6875
169 Ga0268265_10007703 3300028380 Bacteria 7266
170 Ga0268265_10041517 3300028380 Bacteria 3405
171 Ga0268264_10044902 3300028381 Unclassified 3667
172 Ga0265762_1000110 3300030760 Bacteria 12081
173 Ga0265332_10016977 3300031238 Unclassified 3211
174 Ga0265325_10001153 3300031241 Bacteria 18929
175 Ga0265329_10003347 3300031242 Bacteria 7011
176 Ga0265331_10017239 3300031250 Bacteria 3773
177 Ga0265314_10000554 3300031711 Bacteria 47642
178 Ga0307413_10008068 3300031824 Bacteria 4942
179 Ga0307406_10022984 3300031901 Bacteria 3704
180 Ga0307412_10009747 3300031911 Bacteria 5516
181 Ga0307412_10014489 3300031911 Bacteria 4650
182 Ga0307409_100002138 3300031995 Bacteria 10183
183 Ga0307411_10011161 3300032005 Bacteria 4833
184 Ga0373927_0017619 3300035695 Bacteria 4699
185 Ga0395900_0017657 3300037418 Bacteria 7282
186 Ga0395905_0005943 3300037471 Bacteria 12366
187 Ga0395905_0006696 3300037471 Bacteria 11544
188 Ga0395901_0001947 3300038443 Bacteria 21253
189 Ga0436365_0453322 3300039437 Bacteria 114543
190 Ga0436365_0924676 3300039437 Bacteria 448697
191 Ga0436365_1022591 3300039437 Bacteria 77387
192 Ga0451576_0049508 3300045051 Bacteria 4409
193 Ga0451576_0052522 3300045051 Bacteria 4270
194 Ga0495580_0029614 3300046472 Bacteria 3972
195 Ga0495594_0006164 3300046499 Bacteria 6168
196 Ga0495608_0009919 3300046511 Bacteria 6649
197 Ga0495618_0021163 3300046514 Bacteria 4009
198 Ga0495620_0000957 3300046515 Bacteria 17767
199 Ga0495628_0034946 3300046516 Bacteria 4041
200 Ga0495628_0038630 3300046516 Bacteria 3820
201 Ga0495630_0033725 3300046517 Bacteria 3819
202 Ga0495652_0020451 3300046529 Bacteria 5885
203 Ga0495587_0018055 3300046536 Bacteria 4374
204 Ga0495645_0008439 3300046543 Bacteria 7198
205 Ga0495645_0014055 3300046543 Bacteria 5674
206 Ga0495667_0053907 3300046559 Bacteria 2647
207 Ga0495634_0044255 3300046642 Bacteria 3014
208 Ga0495635_0024254 3300046663 Bacteria 4229
209 Ga0495657_0020901 3300046675 Bacteria 4704
210 Ga0495599_0020876 3300046678 Bacteria 4082
211 Ga0495599_0030504 3300046678 Bacteria 3383
212 Ga0495623_0033807 3300046679 Bacteria 3281
213 Ga0495674_0008251 3300047319 Bacteria 9936
214 Ga0495674_0058320 3300047319 Bacteria 3375
215 Ga0495680_0003913 3300047322 Bacteria 14410
216 Ga0495680_0052591 3300047322 Bacteria 3174
217 Ga0495684_0024947 3300047471 Bacteria 4598
218 Ga0495602_0032845 3300048088 Bacteria 4880
219 Ga0496109_0000047 3300048912 Bacteria 130578
220 Ga0501079_0046446 3300049741 Bacteria 3351
221 nmdc:mga00v17_28894_c1 3300050491 Bacteria 3250
222 nmdc:mga05p37_16165_c2 3300050507 Bacteria 5494
223 nmdc:mga05p37_1878_c1 3300050507 Bacteria 24473
224 nmdc:mga05p37_92252_c1 3300050507 Bacteria 3731
225 nmdc:mga06r32_23023_c1 3300050510 Bacteria 5762
226 nmdc:mga06r32_3178_c1 3300050510 Bacteria 14715
227 nmdc:mga06r32_5885_c1 3300050510 Bacteria 11036
228 nmdc:mga06r32_67166_c1 3300050510 Bacteria 3461
229 nmdc:mga06r32_90206_c1 3300050510 Bacteria 2994
230 nmdc:mga08y16_13028_c1 3300050511 Bacteria 8751
231 nmdc:mga0rr50_49992_c1 3300050513 Unclassified 3096
232 nmdc:mga0a205_610_c1 3300050515 Bacteria 28472
233 nmdc:mga0a205_96833_c1 3300050515 Unclassified 2850
234 Ga0495601_0013014 3300053077 Bacteria 4998
235 Ga0590075_000060 3300059424 Bacteria 27746
236 Ga0590075_000636 3300059424 Bacteria 9337
237 Ga0590077_000131 3300059426 Bacteria 20206
238 Ga0590077_002408 3300059426 Bacteria 4011

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006173 Ga0070716_100009885 Ga0070716_1000098851 612
2 3300031238 Ga0265332_10016977 Ga0265332_100169772 624
3 3300046472 Ga0495580_0029614 Ga0495580_0029614_59_2173 642
4 3300031911 Ga0307412_10009747 Ga0307412_100097474 688
5 3300037418 Ga0395900_0017657 Ga0395900_0017657_561_3221 693
6 3300037471 Ga0395905_0006696 Ga0395905_0006696_2198_4858 693
7 3300038443 Ga0395901_0001947 Ga0395901_0001947_7765_10425 693
8 3300046678 Ga0495599_0030504 Ga0495599_0030504_843_3191 693
9 3300026116 Ga0207674_10016875 Ga0207674_100168753 694
10 3300009094 Ga0111539_10101433 Ga0111539_101014331 703
11 3300009553 Ga0105249_10028043 Ga0105249_100280432 703
12 3300031995 Ga0307409_100002138 Ga0307409_1000021383 703
13 3300032005 Ga0307411_10011161 Ga0307411_100111611 703
14 3300050507 nmdc:mga05p37_92252_c1 nmdc:mga05p37_92252_c1_567_3038 703
15 3300050513 nmdc:mga0rr50_49992_c1 nmdc:mga0rr50_49992_c1_216_2669 703
16 3300005445 Ga0070708_100002307 Ga0070708_1000023076 704
17 3300006195 Ga0075366_10020683 Ga0075366_100206833 706
18 3300006844 Ga0075428_100033546 Ga0075428_1000335466 706
19 3300009147 Ga0114129_10047538 Ga0114129_100475385 706
20 3300050507 nmdc:mga05p37_1878_c1 nmdc:mga05p37_1878_c1_7254_9674 706
21 3300021384 Ga0213876_10000109 Ga0213876_1000010931 707
22 3300039437 Ga0436365_0453322 Ga0436365_0453322_1590_4031 707
23 3300049741 Ga0501079_0046446 Ga0501079_0046446_590_3040 707
24 3300050491 nmdc:mga00v17_28894_c1 nmdc:mga00v17_28894_c1_429_3092 707
25 3300005434 Ga0070709_10021019 Ga0070709_100210192 710
26 3300005436 Ga0070713_100009828 Ga0070713_1000098282 710
27 3300025906 Ga0207699_10027615 Ga0207699_100276152 710
28 3300025928 Ga0207700_10031627 Ga0207700_100316272 710
29 3300025939 Ga0207665_10006998 Ga0207665_100069982 710
30 3300006844 Ga0075428_100067239 Ga0075428_1000672392 712
31 3300031242 Ga0265329_10003347 Ga0265329_100033472 712
32 3300031711 Ga0265314_10000554 Ga0265314_1000055414 712
33 3300046642 Ga0495634_0044255 Ga0495634_0044255_434_2860 715
34 3300046511 Ga0495608_0009919 Ga0495608_0009919_200_2626 716
35 3300046514 Ga0495618_0021163 Ga0495618_0021163_37_2463 716
36 3300046516 Ga0495628_0034946 Ga0495628_0034946_709_3135 716
37 3300046543 Ga0495645_0008439 Ga0495645_0008439_1055_3475 716
38 3300046663 Ga0495635_0024254 Ga0495635_0024254_994_3414 716
39 3300046675 Ga0495657_0020901 Ga0495657_0020901_1860_4286 716
40 3300009177 Ga0105248_10049344 Ga0105248_100493442 717
41 3300025941 Ga0207711_10008408 Ga0207711_100084083 717
42 3300047322 Ga0495680_0052591 Ga0495680_0052591_703_3129 718
43 3300005471 Ga0070698_100000172 Ga0070698_10000017240 719
44 3300031250 Ga0265331_10017239 Ga0265331_100172392 719
45 3300031824 Ga0307413_10008068 Ga0307413_100080682 719
46 3300046559 Ga0495667_0053907 Ga0495667_0053907_40_2466 719
47 3300047319 Ga0495674_0058320 Ga0495674_0058320_55_2481 719
48 3300005468 Ga0070707_100000919 Ga0070707_1000009195 720
49 3300005549 Ga0070704_100049797 Ga0070704_1000497972 720
50 3300009148 Ga0105243_10000120 Ga0105243_100001206 720
51 3300009176 Ga0105242_10000008 Ga0105242_1000000844 720
52 3300025922 Ga0207646_10000977 Ga0207646_1000097718 720
53 3300025934 Ga0207686_10000023 Ga0207686_1000002343 720
54 3300025935 Ga0207709_10000062 Ga0207709_1000006258 720
55 3300005834 Ga0068851_10005014 Ga0068851_100050143 721
56 3300006846 Ga0075430_100011781 Ga0075430_1000117814 721
57 3300009545 Ga0105237_10001369 Ga0105237_100013693 721
58 3300025321 Ga0207656_10001463 Ga0207656_100014632 721
59 3300025914 Ga0207671_10012147 Ga0207671_100121473 721
60 3300005336 Ga0070680_100031416 Ga0070680_1000314163 722
61 3300005406 Ga0070703_10000017 Ga0070703_1000001732 722
62 3300005441 Ga0070700_100011583 Ga0070700_1000115832 722
63 3300025885 Ga0207653_10000066 Ga0207653_100000667 722
64 3300030760 Ga0265762_1000110 Ga0265762_10001106 722
65 3300053077 Ga0495601_0013014 Ga0495601_0013014_2269_4923 722
66 3300006847 Ga0075431_100025225 Ga0075431_1000252252 723
67 3300006880 Ga0075429_100006111 Ga0075429_1000061114 723
68 3300045051 Ga0451576_0049508 Ga0451576_0049508_688_3099 723
69 3300050510 nmdc:mga06r32_90206_c1 nmdc:mga06r32_90206_c1_274_2685 723
70 3300005444 Ga0070694_100016474 Ga0070694_1000164742 724
71 3300059424 Ga0590075_000060 Ga0590075_000060_1440_4085 724
72 3300059424 Ga0590075_000636 Ga0590075_000636_6595_9231 724
73 3300059426 Ga0590077_000131 Ga0590077_000131_7488_10124 724
74 3300059426 Ga0590077_002408 Ga0590077_002408_1059_3704 724
75 3300005617 Ga0068859_100048352 Ga0068859_1000483524 725
76 3300005843 Ga0068860_100004526 Ga0068860_1000045268 725
77 3300006931 Ga0097620_100048351 Ga0097620_1000483514 725
78 3300026118 Ga0207675_100013980 Ga0207675_1000139804 725
79 3300005327 Ga0070658_10017964 Ga0070658_100179642 726
80 3300013105 Ga0157369_10066698 Ga0157369_100666982 726
81 3300005434 Ga0070709_10000006 Ga0070709_1000000697 727
82 3300005985 Ga0081539_10003585 Ga0081539_100035851 727
83 3300021384 Ga0213876_10000062 Ga0213876_1000006247 727
84 3300025906 Ga0207699_10000003 Ga0207699_10000003155 727
85 3300039437 Ga0436365_0924676 Ga0436365_0924676_384053_386503 727
86 3300031241 Ga0265325_10001153 Ga0265325_1000115310 728
87 3300005331 Ga0070670_100022706 Ga0070670_1000227064 731
88 3300005563 Ga0068855_100011346 Ga0068855_1000113465 731
89 3300009177 Ga0105248_10008590 Ga0105248_100085903 731
90 3300013105 Ga0157369_10001481 Ga0157369_1000148113 731
91 3300013297 Ga0157378_10011462 Ga0157378_100114622 731
92 3300013307 Ga0157372_10047353 Ga0157372_100473532 731
93 3300003203 JGI25406J46586_10006646 JGI25406J46586_100066462 733
94 3300005985 Ga0081539_10000130 Ga0081539_10000130137 733
95 3300031901 Ga0307406_10022984 Ga0307406_100229843 733
96 3300031911 Ga0307412_10014489 Ga0307412_100144893 733
97 3300005467 Ga0070706_100001572 Ga0070706_1000015723 734
98 3300005536 Ga0070697_100000530 Ga0070697_10000053012 734
99 3300006846 Ga0075430_100082579 Ga0075430_1000825791 734
100 3300009094 Ga0111539_10097948 Ga0111539_100979481 734
101 3300025910 Ga0207684_10013870 Ga0207684_100138703 734
102 3300027907 Ga0207428_10014399 Ga0207428_100143992 734
103 3300050510 nmdc:mga06r32_67166_c1 nmdc:mga06r32_67166_c1_790_3219 734
104 3300050511 nmdc:mga08y16_13028_c1 nmdc:mga08y16_13028_c1_2560_4986 734
105 3300005467 Ga0070706_100001572 Ga0070706_1000015725 735
106 3300005471 Ga0070698_100010046 Ga0070698_1000100465 735
107 3300005536 Ga0070697_100000530 Ga0070697_10000053014 735
108 3300006871 Ga0075434_100014852 Ga0075434_1000148525 735
109 3300013104 Ga0157370_10008646 Ga0157370_100086463 735
110 3300005290 Ga0065712_10074586 Ga0065712_100745864 736
111 3300005445 Ga0070708_100031584 Ga0070708_1000315842 736
112 3300005467 Ga0070706_100028296 Ga0070706_1000282964 736
113 3300005471 Ga0070698_100089067 Ga0070698_1000890671 736
114 3300005518 Ga0070699_100030145 Ga0070699_1000301451 736
115 3300006847 Ga0075431_100129262 Ga0075431_1001292621 736
116 3300025910 Ga0207684_10013066 Ga0207684_100130667 736
117 3300025922 Ga0207646_10031183 Ga0207646_100311832 736
118 3300046516 Ga0495628_0038630 Ga0495628_0038630_760_3453 736
119 3300046517 Ga0495630_0033725 Ga0495630_0033725_31_2724 736
120 3300046529 Ga0495652_0020451 Ga0495652_0020451_1003_3696 736
121 3300046536 Ga0495587_0018055 Ga0495587_0018055_898_3591 736
122 3300046543 Ga0495645_0014055 Ga0495645_0014055_2966_5659 736
123 3300046678 Ga0495599_0020876 Ga0495599_0020876_291_2984 736
124 3300046679 Ga0495623_0033807 Ga0495623_0033807_827_3253 736
125 3300047319 Ga0495674_0008251 Ga0495674_0008251_182_2875 736
126 3300047322 Ga0495680_0003913 Ga0495680_0003913_10980_13673 736
127 3300047471 Ga0495684_0024947 Ga0495684_0024947_807_3500 736
128 3300048088 Ga0495602_0032845 Ga0495602_0032845_2104_4797 736
129 3300050507 nmdc:mga05p37_16165_c2 nmdc:mga05p37_16165_c2_27_2798 736
130 3300005841 Ga0068863_100012744 Ga0068863_1000127445 737
131 3300006844 Ga0075428_100037063 Ga0075428_1000370632 737
132 3300006871 Ga0075434_100044448 Ga0075434_1000444481 737
133 3300013100 Ga0157373_10012935 Ga0157373_100129352 737
134 3300026088 Ga0207641_10000700 Ga0207641_100007005 737
135 3300035695 Ga0373927_0017619 Ga0373927_0017619_665_3274 737
136 3300046499 Ga0495594_0006164 Ga0495594_0006164_987_3596 737
137 3300050515 nmdc:mga0a205_610_c1 nmdc:mga0a205_610_c1_18213_20960 737
138 3300005329 Ga0070683_100012439 Ga0070683_1000124397 738
139 3300005329 Ga0070683_100029856 Ga0070683_1000298563 738
140 3300005334 Ga0068869_100038755 Ga0068869_1000387552 738
141 3300005347 Ga0070668_100010884 Ga0070668_1000108843 738
142 3300005353 Ga0070669_100014527 Ga0070669_1000145273 738
143 3300005364 Ga0070673_100037779 Ga0070673_1000377792 738
144 3300005444 Ga0070694_100011136 Ga0070694_1000111365 738
145 3300005458 Ga0070681_10020687 Ga0070681_100206873 738
146 3300005530 Ga0070679_100003365 Ga0070679_1000033654 738
147 3300005536 Ga0070697_100000287 Ga0070697_10000028713 738
148 3300005577 Ga0068857_100003782 Ga0068857_1000037822 738
149 3300005577 Ga0068857_100025107 Ga0068857_1000251073 738
150 3300005616 Ga0068852_100010643 Ga0068852_1000106432 738
151 3300005618 Ga0068864_100018623 Ga0068864_1000186233 738
152 3300005719 Ga0068861_100012121 Ga0068861_1000121213 738
153 3300005719 Ga0068861_100014774 Ga0068861_1000147743 738
154 3300005842 Ga0068858_100012314 Ga0068858_1000123142 738
155 3300005844 Ga0068862_100008559 Ga0068862_1000085595 738
156 3300006038 Ga0075365_10025384 Ga0075365_100253841 738
157 3300006051 Ga0075364_10013881 Ga0075364_100138813 738
158 3300006353 Ga0075370_10038997 Ga0075370_100389972 738
159 3300006846 Ga0075430_100039001 Ga0075430_1000390012 738
160 3300009094 Ga0111539_10021205 Ga0111539_100212052 738
161 3300009098 Ga0105245_10087815 Ga0105245_100878151 738
162 3300009177 Ga0105248_10053163 Ga0105248_100531633 738
163 3300009553 Ga0105249_10003479 Ga0105249_100034793 738
164 3300009553 Ga0105249_10019949 Ga0105249_100199492 738
165 3300013306 Ga0163162_10030313 Ga0163162_100303132 738
166 3300013306 Ga0163162_10042083 Ga0163162_100420834 738
167 3300014326 Ga0157380_10013276 Ga0157380_100132765 738
168 3300025907 Ga0207645_10007821 Ga0207645_100078212 738
169 3300025912 Ga0207707_10037352 Ga0207707_100373523 738
170 3300025920 Ga0207649_10005616 Ga0207649_100056165 738
171 3300025933 Ga0207706_10000409 Ga0207706_100004092 738
172 3300025936 Ga0207670_10025571 Ga0207670_100255711 738
173 3300025940 Ga0207691_10012664 Ga0207691_100126644 738
174 3300025941 Ga0207711_10042917 Ga0207711_100429172 738
175 3300025944 Ga0207661_10014930 Ga0207661_100149303 738
176 3300025944 Ga0207661_10023287 Ga0207661_100232872 738
177 3300025945 Ga0207679_10008828 Ga0207679_100088283 738
178 3300025945 Ga0207679_10012847 Ga0207679_100128471 738
179 3300025961 Ga0207712_10008080 Ga0207712_100080803 738
180 3300026067 Ga0207678_10015707 Ga0207678_100157073 738
181 3300026116 Ga0207674_10007391 Ga0207674_100073912 738
182 3300026116 Ga0207674_10007775 Ga0207674_100077753 738
183 3300026116 Ga0207674_10027724 Ga0207674_100277243 738
184 3300026118 Ga0207675_100002226 Ga0207675_1000022269 738
185 3300026118 Ga0207675_100037777 Ga0207675_1000377773 738
186 3300028380 Ga0268265_10007703 Ga0268265_100077033 738
187 3300028380 Ga0268265_10041517 Ga0268265_100415171 738
188 3300048912 Ga0496109_0000047 Ga0496109_0000047_50561_52990 738
189 3300050510 nmdc:mga06r32_5885_c1 nmdc:mga06r32_5885_c1_8250_11003 738
190 3300005331 Ga0070670_100043897 Ga0070670_1000438974 739
191 3300005335 Ga0070666_10019692 Ga0070666_100196921 739
192 3300005354 Ga0070675_100062746 Ga0070675_1000627462 739
193 3300005445 Ga0070708_100046055 Ga0070708_1000460552 739
194 3300005471 Ga0070698_100001611 Ga0070698_10000161117 739
195 3300005518 Ga0070699_100010713 Ga0070699_1000107135 739
196 3300005536 Ga0070697_100020807 Ga0070697_1000208074 739
197 3300005548 Ga0070665_100011725 Ga0070665_1000117252 739
198 3300006178 Ga0075367_10002279 Ga0075367_100022793 739
199 3300006847 Ga0075431_100025391 Ga0075431_1000253913 739
200 3300013308 Ga0157375_10125205 Ga0157375_101252051 739
201 3300014325 Ga0163163_10030608 Ga0163163_100306083 739
202 3300014969 Ga0157376_10013522 Ga0157376_100135222 739
203 3300025315 Ga0207697_10000638 Ga0207697_100006387 739
204 3300025315 Ga0207697_10004274 Ga0207697_100042743 739
205 3300025907 Ga0207645_10009041 Ga0207645_100090412 739
206 3300025925 Ga0207650_10006279 Ga0207650_100062794 739
207 3300025931 Ga0207644_10029124 Ga0207644_100291241 739
208 3300026118 Ga0207675_100051996 Ga0207675_1000519962 739
209 3300046515 Ga0495620_0000957 Ga0495620_0000957_419_2830 739
210 3300050510 nmdc:mga06r32_3178_c1 nmdc:mga06r32_3178_c1_8199_10610 739
211 3300005290 Ga0065712_10069197 Ga0065712_100691973 742
212 3300005329 Ga0070683_100046396 Ga0070683_1000463963 742
213 3300006847 Ga0075431_100028356 Ga0075431_1000283562 742
214 3300050510 nmdc:mga06r32_23023_c1 nmdc:mga06r32_23023_c1_1221_3650 742
215 3300021384 Ga0213876_10000592 Ga0213876_100005922 743
216 3300037471 Ga0395905_0005943 Ga0395905_0005943_1030_3471 743
217 3300039437 Ga0436365_1022591 Ga0436365_1022591_1126_3573 743
218 3300005293 Ga0065715_10002539 Ga0065715_100025395 744
219 3300005539 Ga0068853_100037184 Ga0068853_1000371844 744
220 3300005545 Ga0070695_100019195 Ga0070695_1000191952 744
221 3300005617 Ga0068859_100029125 Ga0068859_1000291252 744
222 3300005843 Ga0068860_100011268 Ga0068860_1000112683 744
223 3300005843 Ga0068860_100023630 Ga0068860_1000236303 744
224 3300006237 Ga0097621_100003815 Ga0097621_1000038157 744
225 3300006358 Ga0068871_100049438 Ga0068871_1000494381 744
226 3300006931 Ga0097620_100029125 Ga0097620_1000291252 744
227 3300009551 Ga0105238_10036290 Ga0105238_100362904 744
228 3300028381 Ga0268264_10044902 Ga0268264_100449023 744
229 3300005406 Ga0070703_10007664 Ga0070703_100076642 745
230 3300005518 Ga0070699_100049338 Ga0070699_1000493382 747
231 3300005536 Ga0070697_100006395 Ga0070697_1000063954 747
232 3300026118 Ga0207675_100002926 Ga0207675_1000029263 747
233 3300045051 Ga0451576_0052522 Ga0451576_0052522_1561_3978 747
234 3300009147 Ga0114129_10119089 Ga0114129_101190892 748
235 3300005618 Ga0068864_100005165 Ga0068864_1000051655 749
236 3300011119 Ga0105246_10013363 Ga0105246_100133632 750
237 3300050515 nmdc:mga0a205_96833_c1 nmdc:mga0a205_96833_c1_257_2758 750
238 3300005467 Ga0070706_100000085 Ga0070706_1000000855 751
239 3300025910 Ga0207684_10000091 Ga0207684_10000091107 751
240 3300000532 CNAas_1000199 CNAas_10001994 755

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02687

FtsX

FtsX-like permease family

383

503

0.95

PF02687

FtsX

FtsX-like permease family

801

915

0.9

PF12704

MacB_PCD

MacB-like periplasmic core domain

129

342

0.8

PF12704

MacB_PCD

MacB-like periplasmic core domain

525

770

0.65

Structural Annotation

Top 5 Hits

ID Description Score Start End
3is6-assembly1.cif.gz_B the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.7506 39 251
5f9q-assembly1.cif.gz_A crystal structure of the extracellular domain of noncanonic abc-type transporter yknz from gram-positive bacteria 0.7485 45 244
5f9q-assembly1.cif.gz_A crystal structure of the extracellular domain of noncanonic abc-type transporter yknz from gram-positive bacteria 0.7391 45 244
3is6-assembly1.cif.gz_B the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.7349 39 251
3is6-assembly1.cif.gz_A the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.7035 37 244
ID Description Score Start End Superfamily
2iruB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.7133 198 233 3.30.70.3300
af_Q47208_1_107_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.6414 607 633 3.30.70.260
af_P9WNV3_16_301_3.90.920.10 Alpha Beta;Alpha-Beta Complex;DNA primase, PRIM domain;DNA primase, PRIM domain 0.5485 198 247 3.90.920.10
af_Q2FZQ5_283_457_1.10.357.20 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;SLC41 divalent cation transporters, integral membrane domain 0.4525 210 377 1.10.357.20
af_Q7ZUW8_47_325_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.3916 607 669 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A2V9WDV6-F1-model_v4 MacB-like periplasmic core domain-containing protein 0.9482 449 603
AF-A0A7X6AS08-F1-model_v4 MacB-like periplasmic core domain-containing protein 0.9351 35 201
AF-A0A2V9KRE3-F1-model_v4 MacB-like periplasmic core domain-containing protein 0.9345 80 192
AF-A0A2V7XNV6-F1-model_v4 MacB-like periplasmic core domain-containing protein 0.9166 23 283 GO:0005886
GO:0022857
AF-A0A1Q7Z9V7-F1-model_v4 MacB-like periplasmic core domain-containing protein 0.9111 22 185 GO:0016020

Feature Viewer

pLDDT pTM Quality
75.21 0.73 High
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Predicted Structure (AlphaFold2)

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