F351431

General Info

Members Datasets Scaffolds Average Seq Length
238 165 230 384

Family's Representative Sequence

Representative Sequence 3300053156|Ga0500622_0000167|Ga0500622_0000167_720_1958
Length 412
Sequence MHDISPPEDTYDSHSKYGPEEGAEHGPDSRKLRRIGIGVAAVALLVVAGGAAMRLNAVNELRATSAQAAVPTVSVLSPMTDGGGGTLVLPGNIQAFNSAPIYARTNGYVRRWLVDIGDHVSAGQTLAVLDAPEVDQQLAQARADYQTALANQRLAASTERRWSAMLAKDAVSKQEADEKSGDLAAKSALSNASLANVRRLQALQGFTRLSAPFAGVVTSRSAQIGALVVSGTAASQPLFTVSEVGRMRIYVRVPQGNSASVHPGMTATLTLPEFPGRTFTATMTRSAQAVDAQSGAVLVELQADNPDGALKPGAFAQVSFAGEGAKGSGVSLPGSAILYGNDGPSVALVGSDSRVTVRPVAITRDDGSKVLVSGISAADRVIDSPPDSIRTGDQVKVQRLATAPAKGAANAR

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere
3 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere
4 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
5 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
6 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
7 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
8 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
9 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
10 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
11 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
12 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
13 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
14 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
15 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
16 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
17 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
18 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
19 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
20 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
21 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
22 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
23 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
24 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
25 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
54 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
55 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
57 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
84 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
88 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
89 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
90 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
91 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
92 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
93 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
94 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
95 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
96 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
97 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
98 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
99 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
100 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
101 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
102 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
103 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
104 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
105 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
106 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
107 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
108 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
109 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
110 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
111 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
112 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
113 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
114 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
115 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
116 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
117 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
118 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
119 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
120 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
121 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
122 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
123 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
124 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
125 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
126 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
127 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
128 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
129 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
130 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
131 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
132 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
133 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
134 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
135 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
136 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
137 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
138 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
139 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
140 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
141 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
142 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
143 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
144 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
145 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
146 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
147 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
148 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
149 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
153 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
154 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
155 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
156 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
157 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
158 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
159 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
160 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
161 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
162 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
163 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
164 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere
165 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.64
Metatranscriptomes 0
Isolates 3.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.76
Nodule 0
Rhizoplane 0.84
Rhizosphere 72.27
Stem 0
Stem Tuber 0
Unclassified 15.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1754374 2162886007 Bacteria 2522
2 JGI24741J21665_1000259 3300001915 Bacteria 15846
3 JGI24740J21852_10000406 3300001979 Bacteria 18505
4 JGI24739J22299_10001066 3300001989 Bacteria 10210
5 JGI24739J22299_10021840 3300001989 Bacteria 2275
6 JGI24737J22298_10034607 3300001990 Bacteria 1566
7 JGI24735J21928_10003109 3300002067 Bacteria 5685
8 JGI24735J21928_10011656 3300002067 Bacteria 2785
9 JGI24738J21930_10001086 3300002075 Bacteria 7689
10 JGI25165J46597_1000100 3300003214 Bacteria 157712
11 rootH2_10158041 3300003320 Bacteria 2147
12 rootL2_10153846 3300003322 Bacteria 1731
13 Ga0055530_10004181 3300003791 Bacteria 7611
14 Ga0070658_10000957 3300005327 Bacteria 24684
15 Ga0070658_10005952 3300005327 Bacteria 9896
16 Ga0070666_10096297 3300005335 Bacteria 2037
17 Ga0070660_100037753 3300005339 Bacteria 3662
18 Ga0070668_100000237 3300005347 Bacteria 36121
19 Ga0070669_100043516 3300005353 Bacteria 3271
20 Ga0070671_100004413 3300005355 Bacteria 11121
21 Ga0070659_100048342 3300005366 Bacteria 3341
22 Ga0070667_100000030 3300005367 Bacteria 178327
23 Ga0070663_100002500 3300005455 Bacteria 10364
24 Ga0070663_100010237 3300005455 Bacteria 5842
25 Ga0068867_100202155 3300005459 Bacteria 1591
26 Ga0068853_100014819 3300005539 Bacteria 6400
27 Ga0068853_100047496 3300005539 Bacteria 3684
28 Ga0070665_100107363 3300005548 Bacteria 2794
29 Ga0068855_100003431 3300005563 Bacteria 19388
30 Ga0068856_100009056 3300005614 Bacteria 9686
31 Ga0068852_100047381 3300005616 Bacteria 3667
32 Ga0068852_100328025 3300005616 Bacteria 1488
33 Ga0068859_100025914 3300005617 Bacteria 5882
34 Ga0068859_100218119 3300005617 Bacteria 1995
35 Ga0068863_100000049 3300005841 Bacteria 132539
36 Ga0068863_100010424 3300005841 Bacteria 9033
37 Ga0068860_100010692 3300005843 Bacteria 9066
38 Ga0068860_100016810 3300005843 Bacteria 7133
39 Ga0068860_100188949 3300005843 Bacteria 1993
40 Ga0068862_100000023 3300005844 Bacteria 203389
41 Ga0081539_10020892 3300005985 Bacteria 4399
42 Ga0075368_10000334 3300006042 Bacteria 13820
43 Ga0075367_10000138 3300006178 Bacteria 21936
44 Ga0097620_100025914 3300006931 Bacteria 5882
45 Ga0097620_100218131 3300006931 Bacteria 1995
46 Ga0105240_10019826 3300009093 Bacteria 8983
47 Ga0105240_10104042 3300009093 Bacteria 3448
48 Ga0105240_10109337 3300009093 Bacteria 3348
49 Ga0105241_10041243 3300009174 Bacteria 3487
50 Ga0105248_10003285 3300009177 Bacteria 17946
51 Ga0105238_10297523 3300009551 Bacteria 1597
52 Ga0105249_10000004 3300009553 Bacteria 368014
53 Ga0105239_10000216 3300010375 Bacteria 85418
54 Ga0157373_10044446 3300013100 Bacteria 3171
55 Ga0157371_10090038 3300013102 Bacteria 2174
56 Ga0157370_10000152 3300013104 Bacteria 85001
57 Ga0157369_10037431 3300013105 Bacteria 5312
58 Ga0157369_10118752 3300013105 Bacteria 2807
59 Ga0163161_10001478 3300017792 Bacteria 17345
60 Ga0209147_103111 3300025229 Bacteria 3462
61 Ga0207427_103551 3300025231 Bacteria 3193
62 Ga0209026_1002331 3300025250 Bacteria 7208
63 Ga0209148_1001591 3300025254 Bacteria 10691
64 Ga0209233_1000143 3300025261 Bacteria 191568
65 Ga0209455_1009779 3300025272 Bacteria 2490
66 Ga0209050_1000191 3300025298 Bacteria 138334
67 Ga0209257_1006686 3300025304 Bacteria 7303
68 Ga0207680_10010295 3300025903 Bacteria 4672
69 Ga0207647_10008047 3300025904 Bacteria 7580
70 Ga0207647_10032312 3300025904 Bacteria 3364
71 Ga0207647_10035100 3300025904 Bacteria 3197
72 Ga0207705_10004906 3300025909 Bacteria 10039
73 Ga0207695_10007578 3300025913 Bacteria 13763
74 Ga0207695_10093596 3300025913 Bacteria 3014
75 Ga0207671_10033939 3300025914 Bacteria 3794
76 Ga0207671_10094503 3300025914 Bacteria 2256
77 Ga0207657_10007059 3300025919 Bacteria 11539
78 Ga0207657_10044085 3300025919 Bacteria 3924
79 Ga0207657_10102225 3300025919 Bacteria 2377
80 Ga0207694_10226408 3300025924 Bacteria 1526
81 Ga0207644_10009484 3300025931 Bacteria 6393
82 Ga0207690_10030892 3300025932 Bacteria 3422
83 Ga0207706_10072429 3300025933 Bacteria 3031
84 Ga0207711_10004532 3300025941 Bacteria 11828
85 Ga0207679_10172521 3300025945 Bacteria 1782
86 Ga0207667_10024052 3300025949 Bacteria 6698
87 Ga0207667_10166604 3300025949 Bacteria 2265
88 Ga0207712_10000008 3300025961 Bacteria 527957
89 Ga0207640_10106181 3300025981 Bacteria 1980
90 Ga0207658_10000019 3300025986 Bacteria 206335
91 Ga0207639_10003489 3300026041 Bacteria 10581
92 Ga0207639_10057084 3300026041 Bacteria 2996
93 Ga0207678_10001592 3300026067 Bacteria 20882
94 Ga0207678_10025465 3300026067 Bacteria 5164
95 Ga0207702_10003325 3300026078 Bacteria 14768
96 Ga0207702_10003623 3300026078 Bacteria 14015
97 Ga0207641_10000029 3300026088 Bacteria 229383
98 Ga0207641_10017853 3300026088 Bacteria 5812
99 Ga0207648_10094970 3300026089 Bacteria 2607
100 Ga0207674_10034681 3300026116 Bacteria 5272
101 Ga0207698_10078411 3300026142 Bacteria 2652
102 Ga0209813_10000023 3300027866 Bacteria 72775
103 Ga0268266_10068308 3300028379 Bacteria 3077
104 Ga0268266_10082567 3300028379 Bacteria 2804
105 Ga0268265_10000035 3300028380 Bacteria 207267
106 Ga0268264_10011935 3300028381 Bacteria 7154
107 Ga0268264_10039036 3300028381 Bacteria 3922
108 Ga0265338_10109720 3300028800 Bacteria 2226
109 Ga0265331_10005484 3300031250 Bacteria 7659
110 Ga0265316_10087476 3300031344 Bacteria 2380
111 Ga0307513_10045163 3300031456 Bacteria 4817
112 Ga0307408_100002177 3300031548 Bacteria 14019
113 Ga0307413_10107276 3300031824 Bacteria 1861
114 Ga0307406_10002504 3300031901 Bacteria 10014
115 Ga0307412_10012602 3300031911 Bacteria 4933
116 Ga0307416_100029208 3300032002 Bacteria 4114
117 Ga0307510_10007699 3300033180 Bacteria 12843
118 Ga0395899_0013597 3300037312 Bacteria 6222
119 Ga0395900_0095517 3300037418 Bacteria 3054
120 Ga0395905_0106562 3300037471 Bacteria 2632
121 Ga0439448_0001499 3300042005 Bacteria 6073
122 Ga0439448_0011617 3300042005 Bacteria 2626
123 Ga0439458_0000028 3300042157 Bacteria 23026
124 Ga0466972_0002239 3300044658 Bacteria 9506
125 Ga0466964_0007781 3300044706 Bacteria 4012
126 Ga0466968_0022254 3300044735 Bacteria 2576
127 Ga0466968_0035338 3300044735 Bacteria 2090
128 Ga0466970_0018164 3300044765 Bacteria 3639
129 Ga0466957_0013736 3300044842 Bacteria 4703
130 Ga0466967_0229063 3300045976 Bacteria 1769
131 Ga0495617_040102 3300046452 Bacteria 1566
132 Ga0495627_000060 3300046453 Bacteria 140874
133 Ga0495627_001408 3300046453 Bacteria 14219
134 Ga0495638_0000073 3300046460 Bacteria 164378
135 Ga0495650_0000281 3300046471 Bacteria 97226
136 Ga0495584_0015478 3300046491 Bacteria 3886
137 Ga0495596_0000115 3300046500 Bacteria 55143
138 Ga0495596_0007116 3300046500 Bacteria 5066
139 Ga0495607_0004772 3300046501 Bacteria 9908
140 Ga0495583_0000087 3300046506 Bacteria 164974
141 Ga0495583_0001958 3300046506 Bacteria 18923
142 Ga0495606_0000259 3300046507 Bacteria 93403
143 Ga0495606_0021113 3300046507 Bacteria 4776
144 Ga0495610_0000241 3300046512 Bacteria 57706
145 Ga0495610_0000882 3300046512 Bacteria 27913
146 Ga0495616_0000015 3300046513 Bacteria 187751
147 Ga0495632_0000001 3300046519 Bacteria 873295
148 Ga0495632_0000083 3300046519 Bacteria 97159
149 Ga0495632_0011990 3300046519 Bacteria 5022
150 Ga0495637_0000939 3300046520 Bacteria 18610
151 Ga0495637_0010495 3300046520 Bacteria 4476
152 Ga0495643_0000004 3300046522 Bacteria 519944
153 Ga0495643_0000006 3300046522 Bacteria 419524
154 Ga0495643_0008117 3300046522 Bacteria 6685
155 Ga0495648_0000049 3300046524 Bacteria 164366
156 Ga0495648_0018038 3300046524 Bacteria 5018
157 Ga0495648_0065623 3300046524 Bacteria 2133
158 Ga0495663_0000001 3300046525 Bacteria 595264
159 Ga0495654_0034479 3300046530 Bacteria 2553
160 Ga0495654_0050011 3300046530 Bacteria 2044
161 Ga0495609_0001709 3300046538 Bacteria 14220
162 Ga0495633_0000743 3300046558 Bacteria 29407
163 Ga0495668_0001490 3300046616 Bacteria 22423
164 Ga0495625_0007961 3300046660 Bacteria 9107
165 Ga0495670_0057689 3300046691 Bacteria 1949
166 Ga0495671_0000008 3300046692 Bacteria 419524
167 Ga0495671_0000042 3300046692 Bacteria 165201
168 Ga0495671_0018669 3300046692 Bacteria 3677
169 Ga0495677_0008946 3300047445 Bacteria 3704
170 Ga0495673_0000111 3300047469 Bacteria 164974
171 Ga0495681_0000012 3300047470 Bacteria 200275
172 Ga0495681_0000047 3300047470 Bacteria 110934
173 Ga0495681_0002112 3300047470 Bacteria 14449
174 Ga0495686_0000060 3300047472 Bacteria 237402
175 Ga0495686_0000952 3300047472 Bacteria 35779
176 Ga0495686_0002534 3300047472 Bacteria 17076
177 Ga0495686_0009449 3300047472 Bacteria 7024
178 Ga0495615_0000021 3300048090 Bacteria 52484
179 Ga0495626_0002316 3300048091 Bacteria 13467
180 Ga0496108_0010951 3300048911 Bacteria 7364
181 Ga0496110_0002309 3300048913 Bacteria 14255
182 Ga0496116_0000116 3300048919 Bacteria 172374
183 Ga0496117_0013677 3300048920 Bacteria 7060
184 Ga0496117_0103887 3300048920 Bacteria 1790
185 Ga0496118_0014995 3300048921 Bacteria 7208
186 Ga0496121_0002592 3300048924 Bacteria 27296
187 Ga0496121_0008029 3300048924 Bacteria 12586
188 Ga0496121_0010099 3300048924 Bacteria 10706
189 Ga0496121_0029913 3300048924 Bacteria 5018
190 Ga0496122_0000745 3300048925 Bacteria 63497
191 Ga0496122_0007794 3300048925 Bacteria 11772
192 Ga0496122_0011119 3300048925 Bacteria 9171
193 Ga0496123_0000386 3300048926 Bacteria 82804
194 Ga0496123_0000805 3300048926 Bacteria 50631
195 Ga0496123_0001287 3300048926 Bacteria 35798
196 Ga0496123_0018505 3300048926 Bacteria 5538
197 Ga0496124_0001758 3300048927 Bacteria 30259
198 Ga0496124_0008937 3300048927 Bacteria 10380
199 Ga0496124_0025981 3300048927 Bacteria 5289
200 Ga0496124_0031968 3300048927 Bacteria 4654
201 Ga0496124_0056519 3300048927 Bacteria 3309
202 Ga0496124_0172102 3300048927 Bacteria 1675
203 Ga0496125_0002816 3300048928 Bacteria 21947
204 Ga0496125_0063481 3300048928 Bacteria 2945
205 Ga0496125_0090365 3300048928 Bacteria 2298
206 Ga0496126_0000428 3300048929 Bacteria 84757
207 Ga0496126_0019453 3300048929 Bacteria 6687
208 Ga0496126_0023271 3300048929 Bacteria 6004
209 Ga0495678_027735 3300049459 Bacteria 2399
210 Ga0501032_0035570 3300049569 Bacteria 3404
211 Ga0501043_0010127 3300049579 Bacteria 7392
212 Ga0501043_0051248 3300049579 Bacteria 3243
213 Ga0501047_0000256 3300049581 Bacteria 62551
214 Ga0501035_0089211 3300049822 Bacteria 2716
215 nmdc:mga06z11_192_c1 3300050494 Bacteria 24606
216 nmdc:mga04h51_78_c1 3300050495 Bacteria 31657
217 Ga0500643_000552 3300053087 Bacteria 26025
218 Ga0500643_000649 3300053087 Bacteria 23360
219 Ga0500643_010293 3300053087 Bacteria 3492
220 Ga0500643_032525 3300053087 Bacteria 1583
221 Ga0500594_0006592 3300053118 Bacteria 2613
222 Ga0500594_0023845 3300053118 Bacteria 1555
223 Ga0500559_0004956 3300053136 Bacteria 6190
224 Ga0500568_0026256 3300053139 Bacteria 2447
225 Ga0500590_024594 3300053148 Bacteria 3126
226 Ga0500616_0013292 3300053153 Bacteria 4787
227 Ga0500622_0000167 3300053156 Bacteria 70349
228 Ga0500624_000010 3300053157 Bacteria 172530
229 Ga0500624_000011 3300053157 Bacteria 168125
230 Ga0500627_0000002 3300053158 Bacteria 235747

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037312 Ga0395899_0013597 Ga0395899_0013597_5164_6210 316
2 3300053148 Ga0500590_024594 Ga0500590_024594_1728_2912 334
3 3300053118 Ga0500594_0023845 Ga0500594_0023845_214_1365 341
4 3300046512 Ga0495610_0000241 Ga0495610_0000241_50296_51483 343
5 3300037471 Ga0395905_0106562 Ga0395905_0106562_128_1273 344
6 3300025250 Ga0209026_1002331 Ga0209026_10023317 348
7 3300046507 Ga0495606_0000259 Ga0495606_0000259_51342_52505 349
8 3300013104 Ga0157370_10000152 Ga0157370_1000015254 350
9 3300005614 Ga0068856_100009056 Ga0068856_1000090562 351
10 3300026078 Ga0207702_10003325 Ga0207702_100033255 351
11 3300045976 Ga0466967_0229063 Ga0466967_0229063_250_1404 351
12 3300003214 JGI25165J46597_1000100 JGI25165J46597_1000100109 352
13 3300003320 rootH2_10158041 rootH2_101580412 352
14 3300005327 Ga0070658_10000957 Ga0070658_100009572 352
15 3300005339 Ga0070660_100037753 Ga0070660_1000377532 352
16 3300013105 Ga0157369_10037431 Ga0157369_100374314 352
17 3300025231 Ga0207427_103551 Ga0207427_1035512 352
18 3300025261 Ga0209233_1000143 Ga0209233_1000143108 352
19 3300025904 Ga0207647_10035100 Ga0207647_100351002 352
20 3300025909 Ga0207705_10004906 Ga0207705_100049065 352
21 3300037418 Ga0395900_0095517 Ga0395900_0095517_1751_2905 352
22 3300044735 Ga0466968_0035338 Ga0466968_0035338_393_1589 352
23 3300025254 Ga0209148_1001591 Ga0209148_10015916 353
24 3300025272 Ga0209455_1009779 Ga0209455_10097792 353
25 3300025919 Ga0207657_10007059 Ga0207657_100070592 353
26 3300048928 Ga0496125_0063481 Ga0496125_0063481_111_1301 353
27 3300005843 Ga0068860_100016810 Ga0068860_1000168102 358
28 3300028381 Ga0268264_10011935 Ga0268264_100119352 358
29 3300031456 Ga0307513_10045163 Ga0307513_100451633 361
30 3300005617 Ga0068859_100025914 Ga0068859_1000259142 362
31 3300005841 Ga0068863_100010424 Ga0068863_1000104246 362
32 3300005844 Ga0068862_100000023 Ga0068862_10000002320 362
33 3300006931 Ga0097620_100025914 Ga0097620_1000259142 362
34 3300009553 Ga0105249_10000004 Ga0105249_10000004344 362
35 3300025961 Ga0207712_10000008 Ga0207712_10000008475 362
36 3300026088 Ga0207641_10017853 Ga0207641_100178532 362
37 3300028380 Ga0268265_10000035 Ga0268265_1000003520 362
38 3300046501 Ga0495607_0004772 Ga0495607_0004772_2122_3279 362
39 3300046524 Ga0495648_0065623 Ga0495648_0065623_178_1332 365
40 3300048090 Ga0495615_0000021 Ga0495615_0000021_49343_50536 365
41 3300048925 Ga0496122_0007794 Ga0496122_0007794_8681_9874 365
42 3300048926 Ga0496123_0000386 Ga0496123_0000386_56250_57443 365
43 3300048927 Ga0496124_0056519 Ga0496124_0056519_252_1445 365
44 3300005347 Ga0070668_100000237 Ga0070668_10000023716 366
45 3300005353 Ga0070669_100043516 Ga0070669_1000435162 366
46 3300005355 Ga0070671_100004413 Ga0070671_1000044139 366
47 3300005367 Ga0070667_100000030 Ga0070667_10000003054 366
48 3300005455 Ga0070663_100010237 Ga0070663_1000102372 366
49 3300005617 Ga0068859_100218119 Ga0068859_1002181191 366
50 3300005843 Ga0068860_100010692 Ga0068860_1000106927 366
51 3300005843 Ga0068860_100188949 Ga0068860_1001889492 366
52 3300006931 Ga0097620_100218131 Ga0097620_1002181311 366
53 3300013100 Ga0157373_10044446 Ga0157373_100444462 366
54 3300025931 Ga0207644_10009484 Ga0207644_100094844 366
55 3300025933 Ga0207706_10072429 Ga0207706_100724292 366
56 3300025945 Ga0207679_10172521 Ga0207679_101725212 366
57 3300025986 Ga0207658_10000019 Ga0207658_1000001955 366
58 3300026067 Ga0207678_10025465 Ga0207678_100254653 366
59 3300028381 Ga0268264_10039036 Ga0268264_100390362 366
60 3300033180 Ga0307510_10007699 Ga0307510_100076999 366
61 3300053087 Ga0500643_032525 Ga0500643_032525_400_1530 366
62 3300044842 Ga0466957_0013736 Ga0466957_0013736_910_2064 367
63 3300046522 Ga0495643_0000004 Ga0495643_0000004_192295_193482 367
64 3300005335 Ga0070666_10096297 Ga0070666_100962972 368
65 3300005841 Ga0068863_100000049 Ga0068863_10000004971 368
66 3300009177 Ga0105248_10003285 Ga0105248_100032857 368
67 3300025903 Ga0207680_10010295 Ga0207680_100102952 368
68 3300025941 Ga0207711_10004532 Ga0207711_100045322 368
69 3300026088 Ga0207641_10000029 Ga0207641_1000002971 368
70 3300046513 Ga0495616_0000015 Ga0495616_0000015_4637_5818 369
71 3300046616 Ga0495668_0001490 Ga0495668_0001490_14718_15899 369
72 3300046691 Ga0495670_0057689 Ga0495670_0057689_489_1643 370
73 3300002067 JGI24735J21928_10011656 JGI24735J21928_100116562 374
74 3300013105 Ga0157369_10118752 Ga0157369_101187522 374
75 3300025919 Ga0207657_10102225 Ga0207657_101022252 374
76 3300042005 Ga0439448_0011617 Ga0439448_0011617_528_1682 374
77 3300046506 Ga0495583_0001958 Ga0495583_0001958_3399_4529 374
78 3300046660 Ga0495625_0007961 Ga0495625_0007961_6426_7556 374
79 3300047445 Ga0495677_0008946 Ga0495677_0008946_942_2072 374
80 3300047472 Ga0495686_0000952 Ga0495686_0000952_11122_12285 375
81 3300001989 JGI24739J22299_10021840 JGI24739J22299_100218402 377
82 3300001990 JGI24737J22298_10034607 JGI24737J22298_100346072 377
83 3300025904 Ga0207647_10008047 Ga0207647_100080472 377
84 3300025932 Ga0207690_10030892 Ga0207690_100308922 377
85 3300028800 Ga0265338_10109720 Ga0265338_101097202 377
86 3300031250 Ga0265331_10005484 Ga0265331_100054842 377
87 3300031344 Ga0265316_10087476 Ga0265316_100874762 377
88 3300042005 Ga0439448_0001499 Ga0439448_0001499_729_1883 377
89 3300042157 Ga0439458_0000028 Ga0439458_0000028_21446_22600 377
90 3300001915 JGI24741J21665_1000259 JGI24741J21665_10002596 378
91 3300001979 JGI24740J21852_10000406 JGI24740J21852_100004068 378
92 3300001989 JGI24739J22299_10001066 JGI24739J22299_100010664 378
93 3300002067 JGI24735J21928_10003109 JGI24735J21928_100031091 378
94 3300002075 JGI24738J21930_10001086 JGI24738J21930_100010862 378
95 3300005455 Ga0070663_100002500 Ga0070663_1000025006 378
96 3300005539 Ga0068853_100014819 Ga0068853_1000148194 378
97 3300005548 Ga0070665_100107363 Ga0070665_1001073632 378
98 3300009174 Ga0105241_10041243 Ga0105241_100412432 378
99 3300009551 Ga0105238_10297523 Ga0105238_102975232 378
100 3300025904 Ga0207647_10032312 Ga0207647_100323122 378
101 3300025914 Ga0207671_10033939 Ga0207671_100339392 378
102 3300025914 Ga0207671_10094503 Ga0207671_100945032 378
103 3300025919 Ga0207657_10044085 Ga0207657_100440852 378
104 3300025924 Ga0207694_10226408 Ga0207694_102264082 378
105 3300026041 Ga0207639_10003489 Ga0207639_100034896 378
106 3300026067 Ga0207678_10001592 Ga0207678_100015927 378
107 3300026078 Ga0207702_10003623 Ga0207702_100036236 378
108 3300026142 Ga0207698_10078411 Ga0207698_100784112 378
109 3300028379 Ga0268266_10082567 Ga0268266_100825672 378
110 3300031548 Ga0307408_100002177 Ga0307408_1000021772 378
111 3300031824 Ga0307413_10107276 Ga0307413_101072762 378
112 3300031901 Ga0307406_10002504 Ga0307406_100025045 378
113 3300032002 Ga0307416_100029208 Ga0307416_1000292082 378
114 3300005459 Ga0068867_100202155 Ga0068867_1002021551 381
115 3300005539 Ga0068853_100047496 Ga0068853_1000474962 381
116 3300005563 Ga0068855_100003431 Ga0068855_10000343119 381
117 3300005616 Ga0068852_100047381 Ga0068852_1000473812 381
118 3300009093 Ga0105240_10019826 Ga0105240_100198262 381
119 3300025913 Ga0207695_10093596 Ga0207695_100935962 381
120 3300025949 Ga0207667_10024052 Ga0207667_100240523 381
121 3300026041 Ga0207639_10057084 Ga0207639_100570842 381
122 3300026089 Ga0207648_10094970 Ga0207648_100949702 381
123 3300047472 Ga0495686_0000060 Ga0495686_0000060_219540_220721 381
124 3300003322 rootL2_10153846 rootL2_101538463 382
125 3300044658 Ga0466972_0002239 Ga0466972_0002239_192_1346 382
126 3300044706 Ga0466964_0007781 Ga0466964_0007781_1789_2943 382
127 3300044735 Ga0466968_0022254 Ga0466968_0022254_92_1246 382
128 3300044765 Ga0466970_0018164 Ga0466970_0018164_312_1466 382
129 3300005985 Ga0081539_10020892 Ga0081539_100208922 383
130 3300049569 Ga0501032_0035570 Ga0501032_0035570_1947_3155 383
131 3300049579 Ga0501043_0010127 Ga0501043_0010127_121_1329 383
132 3300049581 Ga0501047_0000256 Ga0501047_0000256_11649_12857 383
133 3300049822 Ga0501035_0089211 Ga0501035_0089211_88_1296 383
134 3300053087 Ga0500643_000552 Ga0500643_000552_24685_25869 383
135 3300046692 Ga0495671_0018669 Ga0495671_0018669_414_1589 384
136 3300048924 Ga0496121_0029913 Ga0496121_0029913_97_1269 384
137 3300053118 Ga0500594_0006592 Ga0500594_0006592_722_1897 384
138 3300053153 Ga0500616_0013292 Ga0500616_0013292_35_1234 386
139 iso_pu_bacteria 2818991438 2819551790 386
140 3300046453 Ga0495627_001408 Ga0495627_001408_10367_11548 388
141 3300046512 Ga0495610_0000882 Ga0495610_0000882_21976_23157 388
142 3300046520 Ga0495637_0010495 Ga0495637_0010495_452_1633 388
143 3300047470 Ga0495681_0000047 Ga0495681_0000047_51365_52546 388
144 3300047472 Ga0495686_0002534 Ga0495686_0002534_7613_8794 388
145 3300049459 Ga0495678_027735 Ga0495678_027735_448_1629 388
146 3300049579 Ga0501043_0051248 Ga0501043_0051248_1062_2243 389
147 iso_pu_bacteria 2510917021 2511127615 389
148 iso_pu_bacteria 8057101203 8057101322 389
149 3300048927 Ga0496124_0008937 Ga0496124_0008937_1930_3126 390
150 3300053087 Ga0500643_000649 Ga0500643_000649_17612_18811 390
151 3300053136 Ga0500559_0004956 Ga0500559_0004956_4684_5883 390
152 iso_pu_bacteria 2512564014 2512644137 390
153 iso_pu_bacteria 2643221541 2643730934 390
154 iso_pu_bacteria 2643221606 2644044413 390
155 iso_pu_bacteria 2643221671 2644391663 390
156 iso_pu_bacteria 8054302542 8054304718 390
157 3300046471 Ga0495650_0000281 Ga0495650_0000281_39747_40931 391
158 3300046519 Ga0495632_0000083 Ga0495632_0000083_49158_50342 391
159 3300046530 Ga0495654_0034479 Ga0495654_0034479_610_1794 391
160 3300047470 Ga0495681_0000012 Ga0495681_0000012_66646_67830 391
161 3300009093 Ga0105240_10104042 Ga0105240_101040423 392
162 3300009093 Ga0105240_10109337 Ga0105240_101093372 392
163 3300010375 Ga0105239_10000216 Ga0105239_1000021646 392
164 3300017792 Ga0163161_10001478 Ga0163161_100014782 392
165 3300025229 Ga0209147_103111 Ga0209147_1031112 392
166 3300025913 Ga0207695_10007578 Ga0207695_100075782 392
167 3300046453 Ga0495627_000060 Ga0495627_000060_76216_77409 392
168 3300046524 Ga0495648_0018038 Ga0495648_0018038_1584_2777 392
169 3300048920 Ga0496117_0013677 Ga0496117_0013677_528_1736 392
170 3300048924 Ga0496121_0008029 Ga0496121_0008029_6118_7320 392
171 3300048924 Ga0496121_0010099 Ga0496121_0010099_3113_4315 392
172 3300048929 Ga0496126_0019453 Ga0496126_0019453_140_1342 392
173 3300003791 Ga0055530_10004181 Ga0055530_100041815 393
174 3300025298 Ga0209050_1000191 Ga0209050_100019185 393
175 3300025304 Ga0209257_1006686 Ga0209257_10066863 393
176 3300031911 Ga0307412_10012602 Ga0307412_100126022 393
177 3300046500 Ga0495596_0000115 Ga0495596_0000115_33593_34801 393
178 3300046500 Ga0495596_0007116 Ga0495596_0007116_1951_3156 393
179 3300046507 Ga0495606_0021113 Ga0495606_0021113_2194_3399 393
180 3300046522 Ga0495643_0008117 Ga0495643_0008117_265_1458 393
181 3300046530 Ga0495654_0050011 Ga0495654_0050011_218_1420 393
182 3300046538 Ga0495609_0001709 Ga0495609_0001709_10860_12068 393
183 3300048091 Ga0495626_0002316 Ga0495626_0002316_10318_11523 393
184 3300048919 Ga0496116_0000116 Ga0496116_0000116_46880_48097 393
185 3300048920 Ga0496117_0103887 Ga0496117_0103887_358_1575 393
186 3300048921 Ga0496118_0014995 Ga0496118_0014995_1951_3168 393
187 3300048925 Ga0496122_0000745 Ga0496122_0000745_56902_58119 393
188 3300048926 Ga0496123_0000805 Ga0496123_0000805_25804_27021 393
189 3300048927 Ga0496124_0001758 Ga0496124_0001758_27592_28809 393
190 3300048929 Ga0496126_0000428 Ga0496126_0000428_60007_61224 393
191 3300053158 Ga0500627_0000002 Ga0500627_0000002_17287_18489 393
192 3300005327 Ga0070658_10005952 Ga0070658_100059525 394
193 3300005366 Ga0070659_100048342 Ga0070659_1000483424 394
194 3300005616 Ga0068852_100328025 Ga0068852_1003280252 394
195 3300006042 Ga0075368_10000334 Ga0075368_100003342 394
196 3300006178 Ga0075367_10000138 Ga0075367_100001387 394
197 3300013102 Ga0157371_10090038 Ga0157371_100900382 394
198 3300025949 Ga0207667_10166604 Ga0207667_101666042 394
199 3300025981 Ga0207640_10106181 Ga0207640_101061812 394
200 3300026116 Ga0207674_10034681 Ga0207674_100346812 394
201 3300027866 Ga0209813_10000023 Ga0209813_1000002344 394
202 3300046452 Ga0495617_040102 Ga0495617_040102_142_1350 394
203 3300050494 nmdc:mga06z11_192_c1 nmdc:mga06z11_192_c1_12297_13502 394
204 3300050495 nmdc:mga04h51_78_c1 nmdc:mga04h51_78_c1_27302_28507 394
205 3300053156 Ga0500622_0000167 Ga0500622_0000167_720_1958 394
206 3300053087 Ga0500643_010293 Ga0500643_010293_360_1562 395
207 3300053157 Ga0500624_000010 Ga0500624_000010_11344_12546 395
208 3300053157 Ga0500624_000011 Ga0500624_000011_25545_26744 395
209 3300046460 Ga0495638_0000073 Ga0495638_0000073_36320_37525 396
210 3300046491 Ga0495584_0015478 Ga0495584_0015478_1843_3045 396
211 3300046506 Ga0495583_0000087 Ga0495583_0000087_36293_37498 396
212 3300046519 Ga0495632_0000001 Ga0495632_0000001_644469_645671 396
213 3300046519 Ga0495632_0011990 Ga0495632_0011990_1938_3143 396
214 3300046520 Ga0495637_0000939 Ga0495637_0000939_11937_13139 396
215 3300046522 Ga0495643_0000006 Ga0495643_0000006_335578_336780 396
216 3300046524 Ga0495648_0000049 Ga0495648_0000049_36320_37525 396
217 3300046525 Ga0495663_0000001 Ga0495663_0000001_227625_228827 396
218 3300046558 Ga0495633_0000743 Ga0495633_0000743_7145_8347 396
219 3300046692 Ga0495671_0000008 Ga0495671_0000008_335578_336780 396
220 3300046692 Ga0495671_0000042 Ga0495671_0000042_36520_37725 396
221 3300047469 Ga0495673_0000111 Ga0495673_0000111_127477_128682 396
222 3300047470 Ga0495681_0002112 Ga0495681_0002112_167_1369 396
223 3300047472 Ga0495686_0009449 Ga0495686_0009449_1840_3042 396
224 3300048913 Ga0496110_0002309 Ga0496110_0002309_10857_12059 396
225 3300048925 Ga0496122_0011119 Ga0496122_0011119_3781_4983 396
226 3300048926 Ga0496123_0001287 Ga0496123_0001287_32824_34038 396
227 3300048926 Ga0496123_0018505 Ga0496123_0018505_1905_3107 396
228 3300048927 Ga0496124_0025981 Ga0496124_0025981_1802_3004 396
229 3300048928 Ga0496125_0002816 Ga0496125_0002816_806_2008 396
230 3300053139 Ga0500568_0026256 Ga0500568_0026256_880_2079 396
231 2162886007 SwRhRL2b_contig_1754374 SwRhRL2b_0300.00002800 397
232 3300028379 Ga0268266_10068308 Ga0268266_100683082 397
233 3300048911 Ga0496108_0010951 Ga0496108_0010951_3897_5090 397
234 3300048924 Ga0496121_0002592 Ga0496121_0002592_10199_11392 397
235 3300048927 Ga0496124_0031968 Ga0496124_0031968_1378_2571 397
236 3300048927 Ga0496124_0172102 Ga0496124_0172102_35_1228 397
237 3300048928 Ga0496125_0090365 Ga0496125_0090365_834_2027 397
238 3300048929 Ga0496126_0023271 Ga0496126_0023271_1071_2264 397

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13533

Biotin_lipoyl_2

Biotin-lipoyl like

97

146

0.94

PF13437

HlyD_3

HlyD family secretion protein

208

313

0.93

PF16576

HlyD_D23

Barrel-sandwich domain of CusB or HlyD membrane-fusion

86

316

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
2v0o-assembly2.cif.gz_C fcho2 f-bar domain 0.9278 118 190
4qsh-assembly1.cif.gz_D crystal structure of l. monocytogenes pyruvate carboxylase in complex with cyclic-di-amp 0.9184 86 228
4qsh-assembly1.cif.gz_B crystal structure of l. monocytogenes pyruvate carboxylase in complex with cyclic-di-amp 0.9182 86 228
4qsh-assembly1.cif.gz_A crystal structure of l. monocytogenes pyruvate carboxylase in complex with cyclic-di-amp 0.9177 86 228
3hai-assembly1.cif.gz_B crystal structure of human pacsin1 f-bar domain (p21 lattice) 0.9075 118 191
ID Description Score Start End Superfamily
1t5eC03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9811 126 183 1.10.287.470
1vf7L03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9801 126 183 1.10.287.470
af_A8JNK4_61_361_1.20.1270.60 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2;Arfaptin homology (AH) domain/BAR domain 0.979 118 191 1.20.1270.60
2v4dA03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9765 126 183 1.10.287.470
1vf7C03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9694 126 183 1.10.287.470
ID Description Score Start End GO Terms
AF-A0A432PZR3-F1-model_v4 Membrane fusion protein biotin-lipoyl like domain-containing protein 0.9704 80 202 GO:0015562
GO:1990281
AF-B6IWX5-F1-model_v4 Efflux transporter component, putative 0.9382 81 230 GO:0015562
GO:1990281
AF-A0A0D0LMU2-F1-model_v4 RND transporter 0.9327 80 195 GO:0005886
GO:0015562
GO:1990281
AF-A0A440F6X0-F1-model_v4 deleted 0.9284 80 192
AF-A0A3D3DQ43-F1-model_v4 Membrane fusion protein biotin-lipoyl like domain-containing protein 0.9155 82 205 GO:0015562
GO:1990281

Feature Viewer

pLDDT pTM Quality
80.7 0.54 Medium
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map