F351228
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 238 | 171 | 476 | 393 |
Family's Representative Sequence
| Representative Sequence | 3300045976|Ga0466967_0195189|Ga0466967_0195189_391_1617 |
| Length | 388 |
| Sequence | VDETAEQDGEAAARERAGGGQERLAAAWRNAERVLWRPSFRRTLRERLEWLYEGARGAYDLDEPADMYGGGIVEALEERVAGLLGKEAAAFFPTGTMAQQVALRCWAGRTGNPAVAMHALSHPEVHERHAFSQVSGLRPVVVTGPDEPRPPSVEEVAGCPEPYGALLLELPLREAGFVLPSWEELYAVVAAARARDAVVHLDGARLWECTAHFGRPLEEIADLADSVYVSFYKSLDGLGGAAVAGPRSLVEEAKVWRHRYGGQVLQQFPTVLSALIGLERELPRLPEYVAHARVVAGALREGFAAGGVPWARVHPGVPHTHQFQVWLPYGAEALTEAGVRQAEETRTALFGRWARGGPGLAFTEVTVAADEVRAAVGQFVRRLPADGA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 2 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 3 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 4 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 5 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 6 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 7 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 8 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 9 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 10 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 11 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 12 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 13 | 3300015688 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 | Metagenome | Rhizosphere |
| 14 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 15 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 16 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 17 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 18 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 19 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 20 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 21 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 22 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 23 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 24 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 25 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 26 | 3300041999 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 | Metagenome | Rhizosphere |
| 27 | 3300042002 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 | Metagenome | Rhizosphere |
| 28 | 3300042014 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 | Metagenome | Rhizosphere |
| 29 | 3300042133 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 | Metagenome | Rhizosphere |
| 30 | 3300042145 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 | Metagenome | Rhizosphere |
| 31 | 3300042157 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 | Metagenome | Rhizosphere |
| 32 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 33 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 34 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 35 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 36 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 37 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 38 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 39 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 40 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 41 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 42 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 43 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 44 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 45 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 46 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 47 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 48 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 49 | 3300046474 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere | Metagenome | Rhizosphere |
| 50 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 51 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 52 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 53 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 54 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 55 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 56 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 57 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 58 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 59 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 60 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 61 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 63 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 64 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 65 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 66 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300047447 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 96 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 97 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 98 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 99 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 100 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 101 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 102 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 103 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 104 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 105 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 106 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300053083 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300053095 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere | Metagenome | Endosphere |
| 109 | 3300053107 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere | Metagenome | Endosphere |
| 110 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 111 | 2547132111 | Streptomyces sp. TOR3209 | Isolate | Rhizosphere |
| 112 | 2554235005 | Streptomyces violaceusniger SPC6 | Isolate | Rhizosphere |
| 113 | 2582581312 | Streptomyces atratus OK008 | Isolate | Rhizosphere |
| 114 | 2582581313 | Streptomyces mirabilis OV308 | Isolate | Rhizosphere |
| 115 | 2616644814 | Streptomyces mirabilis OK461 | Isolate | Rhizosphere |
| 116 | 2616644941 | Streptomyces atratus OK807 | Isolate | Rhizosphere |
| 117 | 2643221578 | Streptomyces sp. Root63 | Isolate | Unclassified |
| 118 | 2643221673 | Streptomyces sp. Root1295 | Isolate | Unclassified |
| 119 | 2643221677 | Streptomyces sp. Root1304 | Isolate | Unclassified |
| 120 | 2643221678 | Streptomyces sp. Root1310 | Isolate | Unclassified |
| 121 | 2643221714 | Streptomyces sp. Root264 | Isolate | Unclassified |
| 122 | 2784746768 | Streptomyces griseorubiginosus SAI-142 | Isolate | Unclassified |
| 123 | 2786546132 | Streptomyces sp. W SAI-097 | Isolate | Unclassified |
| 124 | 2791355406 | Streptomyces rhizosphaericus NRRL B-24304 | Isolate | Unclassified |
| 125 | 2802429296 | Streptomyces sampsonii KJ40 | Isolate | Rhizosphere |
| 126 | 2808606359 | Streptomyces sp. RJA2910 | Isolate | Unclassified |
| 127 | 2808606982 | Streptomyces sp. SLBN-118 | Isolate | Unclassified |
| 128 | 2811994879 | Streptomyces sp. 4-17 | Isolate | Unclassified |
| 129 | 2818991463 | Streptomyces argenteolus 3259 | Isolate | Rhizosphere |
| 130 | 2852635781 | Streptomyces sp. AK010 | Isolate | Rhizosphere |
| 131 | 2862178590 | Streptomyces sp. SDr-06 | Isolate | Rhizosphere |
| 132 | 2862281513 | Streptomyces sp. Act143 | Isolate | Rhizosphere |
| 133 | 2862290372 | Streptomyces triticagri NEAU-YY421 | Isolate | Rhizosphere |
| 134 | 2862574272 | Streptomyces sp. AcE210 | Isolate | Nodule |
| 135 | 2867369537 | Streptomyces sp. Z26 | Isolate | Unclassified |
| 136 | 2867428634 | Streptomyces sp. RP5T | Isolate | Unclassified |
| 137 | 2873151551 | Streptomyces silaceus ACCC40021 | Isolate | Rhizosphere |
| 138 | 2875391855 | Streptomyces cavourensis 1AS2a | Isolate | Rhizosphere |
| 139 | 2877676314 | Streptomyces griseorubiginosus 3E-1 | Isolate | Unclassified |
| 140 | 2912715099 | Streptomyces sp. Z423-1 | Isolate | Rhizosphere |
| 141 | 2918501144 | Streptomyces sp. PvR006 | Isolate | Rhizosphere |
| 142 | 2919468124 | Streptomyces sp. 3330 | Isolate | Rhizosphere |
| 143 | 2935390628 | Streptomyces sp. PvR034 | Isolate | Rhizosphere |
| 144 | 2946045630 | Streptomyces sp. W4I9-2 | Isolate | Rhizosphere |
| 145 | 2946064051 | Streptomyces luteogriseus W4I19-1 | Isolate | Rhizosphere |
| 146 | 2946072368 | Streptomyces achromogenes W4I19-2 | Isolate | Rhizosphere |
| 147 | 2947224130 | Streptomyces afghaniensis W1I20 | Isolate | Rhizosphere |
| 148 | 2954673503 | Streptomyces sp. SAI-119 | Isolate | Rhizosphere |
| 149 | 2954682443 | Streptomyces sp. SAI-149 | Isolate | Rhizosphere |
| 150 | 2954691527 | Streptomyces sp. SAI-127 | Isolate | Rhizosphere |
| 151 | 2954701450 | Streptomyces sp. SAI-144 | Isolate | Rhizosphere |
| 152 | 2954711539 | Streptomyces sp. SAI-090 | Isolate | Rhizosphere |
| 153 | 2954721474 | Streptomyces sp. SAI-117 | Isolate | Rhizosphere |
| 154 | 2954731030 | Streptomyces sp. SAI-133 | Isolate | Rhizosphere |
| 155 | 2954740390 | Streptomyces sp. SAI-041 | Isolate | Rhizosphere |
| 156 | 2954749733 | Streptomyces sp. SAI-135 | Isolate | Rhizosphere |
| 157 | 2954759201 | Streptomyces sp. SAI-208 | Isolate | Rhizosphere |
| 158 | 2997451912 | Streptomyces piniterrae jys28 | Isolate | Rhizosphere |
| 159 | 2997600082 | Streptomyces coffeae CA1R205 | Isolate | Unclassified |
| 160 | 3006493962 | Streptomyces grisecoloratus TRM S81-3 | Isolate | Rhizosphere |
| 161 | 8008558824 | Streptomyces scabiei NRRL B-2795 | Isolate | Nodule |
| 162 | 8008574985 | Streptomyces sp. Jing01 | Isolate | Rhizosphere |
| 163 | 8023623736 | Streptomyces sp. 111WW2 | Isolate | Unclassified |
| 164 | 8025413630 | Streptomyces sp. CAI-17 | Isolate | Rhizosphere |
| 165 | 8025530807 | Streptomyces sp. 4R-3d | Isolate | Unclassified |
| 166 | 8033684223 | Streptomyces phytophilus PIP175 | Isolate | Unclassified |
| 167 | 8047893842 | Streptomyces cangkringensis DSM 41769 | Isolate | Rhizosphere |
| 168 | 8048356638 | Streptomyces rhizosphaericus DSM 41760 | Isolate | Rhizosphere |
| 169 | 8048369669 | Streptomyces indonesiensis DSM 41759 | Isolate | Rhizoplane |
| 170 | 8048379754 | Streptomyces asiaticus DSM 41761 | Isolate | Rhizosphere |
| 171 | 8054160619 | Streptomyces rhizoryzae RS10V-4 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 72.69 |
| Metatranscriptomes | 1.26 |
| Isolates | 26.05 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 2.52 |
| Nodule | 0.84 |
| Rhizoplane | 0.84 |
| Rhizosphere | 78.99 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0466967_0195189 | 3300045976 | Bacteria | 1915 |
| 2 | rootH1_10014875 | 3300003316 | Bacteria | 5551 |
| 3 | rootH2_10012477 | 3300003320 | Bacteria | 7895 |
| 4 | rootH2_10069665 | 3300003320 | Bacteria | 2932 |
| 5 | rootL2_10003921 | 3300003322 | Bacteria | 4419 |
| 6 | rootH1_10013700 | 3300003323 | Bacteria | 4082 |
| 7 | JGI25160J50197_1005405 | 3300003354 | Bacteria | 5322 |
| 8 | Ga0006562J51391_1035121 | 3300003578 | Bacteria | 13520 |
| 9 | Ga0006562J51391_1035122 | 3300003578 | Bacteria | 9580 |
| 10 | Ga0006562J51391_1079138 | 3300003578 | Bacteria | 6320 |
| 11 | Ga0068853_100040995 | 3300005539 | Bacteria | 3953 |
| 12 | Ga0105245_10168096 | 3300009098 | Bacteria | 2086 |
| 13 | Ga0105243_10309350 | 3300009148 | Bacteria | 1435 |
| 14 | Ga0105246_10011083 | 3300011119 | Bacteria | 5584 |
| 15 | Ga0105246_10180150 | 3300011119 | Bacteria | 1626 |
| 16 | Ga0157372_10129469 | 3300013307 | Bacteria | 2903 |
| 17 | Ga0183367_1015 | 3300015688 | Bacteria | 298435 |
| 18 | Ga0207426_1001613 | 3300025302 | Bacteria | 17863 |
| 19 | Ga0207426_1007804 | 3300025302 | Bacteria | 4427 |
| 20 | Ga0207426_1023244 | 3300025302 | Bacteria | 2117 |
| 21 | Ga0207687_10088297 | 3300025927 | Bacteria | 2255 |
| 22 | Ga0307515_10001114 | 3300028794 | Bacteria | 61489 |
| 23 | Ga0307511_10068006 | 3300030521 | Bacteria | 2636 |
| 24 | Ga0307512_10005976 | 3300030522 | Bacteria | 12494 |
| 25 | Ga0307512_10062302 | 3300030522 | Bacteria | 2863 |
| 26 | Ga0307509_10046343 | 3300031507 | Bacteria | 4681 |
| 27 | Ga0307509_10117882 | 3300031507 | Bacteria | 2640 |
| 28 | Ga0307516_10012551 | 3300031730 | Bacteria | 9120 |
| 29 | Ga0307516_10099748 | 3300031730 | Bacteria | 2720 |
| 30 | Ga0307507_10024279 | 3300033179 | Bacteria | 6614 |
| 31 | Ga0307507_10026441 | 3300033179 | Bacteria | 6256 |
| 32 | Ga0307510_10038516 | 3300033180 | Bacteria | 5285 |
| 33 | Ga0307510_10095474 | 3300033180 | Bacteria | 2793 |
| 34 | Ga0395898_0014397 | 3300037466 | Bacteria | 8128 |
| 35 | Ga0439436_0000934 | 3300041404 | Bacteria | 8037 |
| 36 | Ga0451853_0771055 | 3300041512 | Bacteria | 1619 |
| 37 | Ga0439433_0000568 | 3300041999 | Bacteria | 7015 |
| 38 | Ga0439433_0017946 | 3300041999 | Bacteria | 1573 |
| 39 | Ga0439442_007390 | 3300042002 | Bacteria | 2209 |
| 40 | Ga0439457_000652 | 3300042014 | Bacteria | 10254 |
| 41 | Ga0439457_006949 | 3300042014 | Bacteria | 2737 |
| 42 | Ga0450896_007783 | 3300042133 | Bacteria | 1480 |
| 43 | Ga0450906_000882 | 3300042145 | Bacteria | 6573 |
| 44 | Ga0439458_0000467 | 3300042157 | Bacteria | 10310 |
| 45 | Ga0466972_0013664 | 3300044658 | Bacteria | 4073 |
| 46 | Ga0466965_0000918 | 3300044683 | Bacteria | 11302 |
| 47 | Ga0466965_0027860 | 3300044683 | Bacteria | 2743 |
| 48 | Ga0466966_0001419 | 3300044684 | Bacteria | 15433 |
| 49 | Ga0466961_0001929 | 3300044693 | Bacteria | 12920 |
| 50 | Ga0466963_0000798 | 3300044694 | Bacteria | 15705 |
| 51 | Ga0466964_0003843 | 3300044706 | Bacteria | 5512 |
| 52 | Ga0466971_0000437 | 3300044719 | Bacteria | 16286 |
| 53 | Ga0466968_0013370 | 3300044735 | Bacteria | 3227 |
| 54 | Ga0466970_0000265 | 3300044765 | Bacteria | 25600 |
| 55 | Ga0466959_0000823 | 3300045049 | Bacteria | 18317 |
| 56 | Ga0466959_0059661 | 3300045049 | Bacteria | 2778 |
| 57 | Ga0466958_0000083 | 3300045836 | Bacteria | 28940 |
| 58 | Ga0466967_0000617 | 3300045976 | Bacteria | 17715 |
| 59 | Ga0466967_0009978 | 3300045976 | Bacteria | 7089 |
| 60 | Ga0466967_0015364 | 3300045976 | Bacteria | 5998 |
| 61 | Ga0495592_0009789 | 3300046454 | Bacteria | 7215 |
| 62 | Ga0495592_0020455 | 3300046454 | Bacteria | 5033 |
| 63 | Ga0495603_0001094 | 3300046455 | Bacteria | 15733 |
| 64 | Ga0495603_0005291 | 3300046455 | Bacteria | 7693 |
| 65 | Ga0495603_0009539 | 3300046455 | Bacteria | 5863 |
| 66 | Ga0495629_0001192 | 3300046459 | Bacteria | 20488 |
| 67 | Ga0495629_0009489 | 3300046459 | Bacteria | 7114 |
| 68 | Ga0495629_0010904 | 3300046459 | Bacteria | 6611 |
| 69 | Ga0495629_0059925 | 3300046459 | Bacteria | 2660 |
| 70 | Ga0495629_0166312 | 3300046459 | Bacteria | 1531 |
| 71 | Ga0495651_0000452 | 3300046462 | Bacteria | 31571 |
| 72 | Ga0495651_0020939 | 3300046462 | Bacteria | 5078 |
| 73 | Ga0495651_0022340 | 3300046462 | Bacteria | 4917 |
| 74 | Ga0495653_0213538 | 3300046463 | Bacteria | 1302 |
| 75 | Ga0495580_0001834 | 3300046472 | Bacteria | 18676 |
| 76 | Ga0495605_0025221 | 3300046474 | Bacteria | 3099 |
| 77 | Ga0495662_0000295 | 3300046476 | Bacteria | 21630 |
| 78 | Ga0495662_0006538 | 3300046476 | Bacteria | 5821 |
| 79 | Ga0495664_0001031 | 3300046477 | Bacteria | 14412 |
| 80 | Ga0495585_0012963 | 3300046492 | Bacteria | 4897 |
| 81 | Ga0495594_0000428 | 3300046499 | Bacteria | 21181 |
| 82 | Ga0495594_0005776 | 3300046499 | Bacteria | 6353 |
| 83 | Ga0495594_0007710 | 3300046499 | Bacteria | 5535 |
| 84 | Ga0495594_0016960 | 3300046499 | Bacteria | 3842 |
| 85 | Ga0495606_0020817 | 3300046507 | Bacteria | 4822 |
| 86 | Ga0495610_0073866 | 3300046512 | Bacteria | 1583 |
| 87 | Ga0495618_0008838 | 3300046514 | Bacteria | 6084 |
| 88 | Ga0495628_0002923 | 3300046516 | Bacteria | 15308 |
| 89 | Ga0495628_0005393 | 3300046516 | Bacteria | 11208 |
| 90 | Ga0495628_0040640 | 3300046516 | Bacteria | 3715 |
| 91 | Ga0495643_0001222 | 3300046522 | Bacteria | 24839 |
| 92 | Ga0495648_0039205 | 3300046524 | Bacteria | 3017 |
| 93 | Ga0495648_0076340 | 3300046524 | Bacteria | 1924 |
| 94 | Ga0495642_0051778 | 3300046528 | Bacteria | 1690 |
| 95 | Ga0495665_0002936 | 3300046531 | Bacteria | 9206 |
| 96 | Ga0495640_0003477 | 3300046533 | Bacteria | 12677 |
| 97 | Ga0495640_0014551 | 3300046533 | Bacteria | 5949 |
| 98 | Ga0495640_0065215 | 3300046533 | Bacteria | 2459 |
| 99 | Ga0495587_0005555 | 3300046536 | Bacteria | 8227 |
| 100 | Ga0495609_0022056 | 3300046538 | Bacteria | 2935 |
| 101 | Ga0495622_0019573 | 3300046557 | Bacteria | 3151 |
| 102 | Ga0495622_0087256 | 3300046557 | Bacteria | 1434 |
| 103 | Ga0495667_0041154 | 3300046559 | Bacteria | 3065 |
| 104 | Ga0495668_0010410 | 3300046616 | Bacteria | 5626 |
| 105 | Ga0495668_0034926 | 3300046616 | Bacteria | 2818 |
| 106 | Ga0495634_0003955 | 3300046642 | Bacteria | 11759 |
| 107 | Ga0495625_0005546 | 3300046660 | Bacteria | 11458 |
| 108 | Ga0495625_0040710 | 3300046660 | Bacteria | 3386 |
| 109 | Ga0495635_0014906 | 3300046663 | Bacteria | 5439 |
| 110 | Ga0495661_0035469 | 3300046665 | Bacteria | 3129 |
| 111 | Ga0495588_0002446 | 3300046674 | Bacteria | 7951 |
| 112 | Ga0495588_0004766 | 3300046674 | Bacteria | 5996 |
| 113 | Ga0495657_0012517 | 3300046675 | Bacteria | 6303 |
| 114 | Ga0495657_0036692 | 3300046675 | Bacteria | 3385 |
| 115 | Ga0495657_0064035 | 3300046675 | Bacteria | 2423 |
| 116 | Ga0495599_0165066 | 3300046678 | Bacteria | 1368 |
| 117 | Ga0495646_0096720 | 3300046680 | Bacteria | 1697 |
| 118 | Ga0495613_0000838 | 3300046689 | Bacteria | 23741 |
| 119 | Ga0495613_0001939 | 3300046689 | Bacteria | 15685 |
| 120 | Ga0495613_0023816 | 3300046689 | Bacteria | 4561 |
| 121 | Ga0495671_0001482 | 3300046692 | Bacteria | 15729 |
| 122 | Ga0495649_0024603 | 3300046694 | Bacteria | 3356 |
| 123 | Ga0495649_0129218 | 3300046694 | Bacteria | 1333 |
| 124 | Ga0495589_0003955 | 3300046794 | Bacteria | 7952 |
| 125 | Ga0495589_0027124 | 3300046794 | Bacteria | 2897 |
| 126 | Ga0495589_0091569 | 3300046794 | Bacteria | 1476 |
| 127 | Ga0495600_0019879 | 3300046809 | Bacteria | 4292 |
| 128 | Ga0495581_0005613 | 3300047315 | Bacteria | 7272 |
| 129 | Ga0495581_0023168 | 3300047315 | Bacteria | 3598 |
| 130 | Ga0495604_0000385 | 3300047317 | Bacteria | 39910 |
| 131 | Ga0495604_0002116 | 3300047317 | Bacteria | 15984 |
| 132 | Ga0495604_0017869 | 3300047317 | Bacteria | 5673 |
| 133 | Ga0495636_0005283 | 3300047318 | Bacteria | 5072 |
| 134 | Ga0495636_0019694 | 3300047318 | Bacteria | 2714 |
| 135 | Ga0495636_0039178 | 3300047318 | Bacteria | 1962 |
| 136 | Ga0495674_0060208 | 3300047319 | Bacteria | 3313 |
| 137 | Ga0495672_0072099 | 3300047320 | Bacteria | 1952 |
| 138 | Ga0495676_0001764 | 3300047321 | Bacteria | 18899 |
| 139 | Ga0495676_0003282 | 3300047321 | Bacteria | 14617 |
| 140 | Ga0495676_0005280 | 3300047321 | Bacteria | 11826 |
| 141 | Ga0495676_0027746 | 3300047321 | Bacteria | 4851 |
| 142 | Ga0495676_0060317 | 3300047321 | Bacteria | 2973 |
| 143 | Ga0495676_0071376 | 3300047321 | Bacteria | 2669 |
| 144 | Ga0495687_001477 | 3300047443 | Bacteria | 21510 |
| 145 | Ga0495687_026854 | 3300047443 | Bacteria | 2703 |
| 146 | Ga0495675_0028558 | 3300047444 | Bacteria | 3556 |
| 147 | Ga0495685_033651 | 3300047447 | Bacteria | 1761 |
| 148 | Ga0495681_0002042 | 3300047470 | Bacteria | 14702 |
| 149 | Ga0495684_0028066 | 3300047471 | Bacteria | 4322 |
| 150 | Ga0495686_0058265 | 3300047472 | Bacteria | 2408 |
| 151 | Ga0495593_0007827 | 3300047673 | Bacteria | 6227 |
| 152 | Ga0495593_0018694 | 3300047673 | Bacteria | 3892 |
| 153 | Ga0495614_0000688 | 3300048089 | Bacteria | 14225 |
| 154 | Ga0495614_0043727 | 3300048089 | Bacteria | 1921 |
| 155 | Ga0496109_0007729 | 3300048912 | Bacteria | 9104 |
| 156 | Ga0501032_0019285 | 3300049569 | Bacteria | 4772 |
| 157 | Ga0501033_0111161 | 3300049570 | Bacteria | 1994 |
| 158 | Ga0501034_0018555 | 3300049571 | Bacteria | 7131 |
| 159 | Ga0501034_0073351 | 3300049571 | Bacteria | 3431 |
| 160 | Ga0501036_0032051 | 3300049572 | Bacteria | 4440 |
| 161 | Ga0501038_0004597 | 3300049574 | Bacteria | 12841 |
| 162 | Ga0501038_0009232 | 3300049574 | Bacteria | 9049 |
| 163 | Ga0501038_0208785 | 3300049574 | Bacteria | 1563 |
| 164 | Ga0501043_0159439 | 3300049579 | Bacteria | 1763 |
| 165 | Ga0501046_0034665 | 3300049580 | Bacteria | 4071 |
| 166 | Ga0501047_0000427 | 3300049581 | Bacteria | 47178 |
| 167 | Ga0501047_0038467 | 3300049581 | Bacteria | 4629 |
| 168 | Ga0501047_0118752 | 3300049581 | Bacteria | 2526 |
| 169 | Ga0501035_0211622 | 3300049822 | Bacteria | 1658 |
| 170 | Ga0501044_0130923 | 3300049823 | Bacteria | 2503 |
| 171 | Ga0501044_0151331 | 3300049823 | Bacteria | 2302 |
| 172 | Ga0495601_0016126 | 3300053077 | Bacteria | 4524 |
| 173 | Ga0495655_0007828 | 3300053083 | Bacteria | 2005 |
| 174 | Ga0500640_003809 | 3300053095 | Bacteria | 5363 |
| 175 | Ga0500560_005764 | 3300053107 | Bacteria | 2771 |
| 176 | Ga0466962_0000156 | 3300061719 | Bacteria | 28746 |
| 177 | 2547411655 | 2547132111 | Bacteria | 8013147 |
| 178 | 2554257021 | 2554235005 | Bacteria | 6457341 |
| 179 | 2585298088 | 2582581312 | Bacteria | 7308206 |
| 180 | 2585305128 | 2582581313 | Bacteria | 10042643 |
| 181 | 2616701465 | 2616644814 | Bacteria | 11555299 |
| 182 | 2616903605 | 2616644941 | Bacteria | 8510691 |
| 183 | 2643899690 | 2643221578 | Bacteria | 9213798 |
| 184 | 2644403658 | 2643221673 | Bacteria | 9196637 |
| 185 | 2644435346 | 2643221677 | Bacteria | 7584031 |
| 186 | 2644437604 | 2643221678 | Bacteria | 9540101 |
| 187 | 2644627938 | 2643221714 | Bacteria | 9015452 |
| 188 | 2785370497 | 2784746768 | Bacteria | 10036182 |
| 189 | 2786671654 | 2786546132 | Bacteria | 10419719 |
| 190 | 2793984126 | 2791355406 | Bacteria | 11364898 |
| 191 | 2804845832 | 2802429296 | Bacteria | 7227771 |
| 192 | 2808843059 | 2808606359 | Bacteria | 9866990 |
| 193 | 2811845343 | 2808606982 | Bacteria | 7791042 |
| 194 | 2812357064 | 2811994879 | Bacteria | 9313447 |
| 195 | 2819698282 | 2818991463 | Bacteria | 7948711 |
| 196 | 2852640073 | 2852635781 | Bacteria | 8251373 |
| 197 | 2862179508 | 2862178590 | Bacteria | 8583590 |
| 198 | 2862286685 | 2862281513 | Bacteria | 9621493 |
| 199 | 2862296078 | 2862290372 | Bacteria | 7471434 |
| 200 | 2862578426 | 2862574272 | Bacteria | 10567477 |
| 201 | 2867372991 | 2867369537 | Bacteria | 6501581 |
| 202 | 2867435718 | 2867428634 | Bacteria | 9590268 |
| 203 | 2873154939 | 2873151551 | Bacteria | 8625867 |
| 204 | 2875394660 | 2875391855 | Bacteria | 7600475 |
| 205 | 2877680123 | 2877676314 | Bacteria | 9512378 |
| 206 | 2877682430 | 2877676314 | Bacteria | 9512378 |
| 207 | 2912718713 | 2912715099 | Bacteria | 9460473 |
| 208 | 2918504597 | 2918501144 | Bacteria | 8668083 |
| 209 | 2919471475 | 2919468124 | Bacteria | 9133025 |
| 210 | 2935392637 | 2935390628 | Bacteria | 7043367 |
| 211 | 2946049975 | 2946045630 | Bacteria | 8527308 |
| 212 | 2946068814 | 2946064051 | Bacteria | 8957905 |
| 213 | 2946076860 | 2946072368 | Bacteria | 8999607 |
| 214 | 2947228096 | 2947224130 | Bacteria | 9938529 |
| 215 | 2954677940 | 2954673503 | Bacteria | 9685905 |
| 216 | 2954686217 | 2954682443 | Bacteria | 9862841 |
| 217 | 2954695874 | 2954691527 | Bacteria | 10720516 |
| 218 | 2954711065 | 2954701450 | Bacteria | 10834262 |
| 219 | 2954715278 | 2954711539 | Bacteria | 10867210 |
| 220 | 2954725219 | 2954721474 | Bacteria | 10456478 |
| 221 | 2954736597 | 2954731030 | Bacteria | 10243860 |
| 222 | 2954744152 | 2954740390 | Bacteria | 10229294 |
| 223 | 2954755446 | 2954749733 | Bacteria | 10366972 |
| 224 | 2954763095 | 2954759201 | Bacteria | 9358192 |
| 225 | 2997454257 | 2997451912 | Bacteria | 8492419 |
| 226 | 2997600265 | 2997600082 | Bacteria | 9896405 |
| 227 | 3006498241 | 3006493962 | Bacteria | 8825450 |
| 228 | 8008566246 | 8008558824 | Bacteria | 10610750 |
| 229 | 8008578050 | 8008574985 | Bacteria | 7815457 |
| 230 | 8023624741 | 8023623736 | Bacteria | 8593882 |
| 231 | 8025418508 | 8025413630 | Bacteria | 7014048 |
| 232 | 8025538129 | 8025530807 | Bacteria | 8495698 |
| 233 | 8033687750 | 8033684223 | Bacteria | 6906479 |
| 234 | 8047897919 | 8047893842 | Bacteria | 11723082 |
| 235 | 8048360975 | 8048356638 | Bacteria | 11044339 |
| 236 | 8048374882 | 8048369669 | Bacteria | 11666822 |
| 237 | 8048383340 | 8048379754 | Bacteria | 11877923 |
| 238 | 8054165874 | 8054160619 | Bacteria | 7783213 |
| 239 | Ga0466967_0195189 | |||
| 240 | rootH1_10014875 | |||
| 241 | rootH2_10012477 | |||
| 242 | rootH2_10069665 | |||
| 243 | rootL2_10003921 | |||
| 244 | rootH1_10013700 | |||
| 245 | JGI25160J50197_1005405 | |||
| 246 | Ga0006562J51391_1035121 | |||
| 247 | Ga0006562J51391_1035122 | |||
| 248 | Ga0006562J51391_1079138 | |||
| 249 | Ga0068853_100040995 | |||
| 250 | Ga0105245_10168096 | |||
| 251 | Ga0105243_10309350 | |||
| 252 | Ga0105246_10011083 | |||
| 253 | Ga0105246_10180150 | |||
| 254 | Ga0157372_10129469 | |||
| 255 | Ga0183367_1015 | |||
| 256 | Ga0207426_1001613 | |||
| 257 | Ga0207426_1007804 | |||
| 258 | Ga0207426_1023244 | |||
| 259 | Ga0207687_10088297 | |||
| 260 | Ga0307515_10001114 | |||
| 261 | Ga0307511_10068006 | |||
| 262 | Ga0307512_10005976 | |||
| 263 | Ga0307512_10062302 | |||
| 264 | Ga0307509_10046343 | |||
| 265 | Ga0307509_10117882 | |||
| 266 | Ga0307516_10012551 | |||
| 267 | Ga0307516_10099748 | |||
| 268 | Ga0307507_10024279 | |||
| 269 | Ga0307507_10026441 | |||
| 270 | Ga0307510_10038516 | |||
| 271 | Ga0307510_10095474 | |||
| 272 | Ga0395898_0014397 | |||
| 273 | Ga0439436_0000934 | |||
| 274 | Ga0451853_0771055 | |||
| 275 | Ga0439433_0000568 | |||
| 276 | Ga0439433_0017946 | |||
| 277 | Ga0439442_007390 | |||
| 278 | Ga0439457_000652 | |||
| 279 | Ga0439457_006949 | |||
| 280 | Ga0450896_007783 | |||
| 281 | Ga0450906_000882 | |||
| 282 | Ga0439458_0000467 | |||
| 283 | Ga0466972_0013664 | |||
| 284 | Ga0466965_0000918 | |||
| 285 | Ga0466965_0027860 | |||
| 286 | Ga0466966_0001419 | |||
| 287 | Ga0466961_0001929 | |||
| 288 | Ga0466963_0000798 | |||
| 289 | Ga0466964_0003843 | |||
| 290 | Ga0466971_0000437 | |||
| 291 | Ga0466968_0013370 | |||
| 292 | Ga0466970_0000265 | |||
| 293 | Ga0466959_0000823 | |||
| 294 | Ga0466959_0059661 | |||
| 295 | Ga0466958_0000083 | |||
| 296 | Ga0466967_0000617 | |||
| 297 | Ga0466967_0009978 | |||
| 298 | Ga0466967_0015364 | |||
| 299 | Ga0495592_0009789 | |||
| 300 | Ga0495592_0020455 | |||
| 301 | Ga0495603_0001094 | |||
| 302 | Ga0495603_0005291 | |||
| 303 | Ga0495603_0009539 | |||
| 304 | Ga0495629_0001192 | |||
| 305 | Ga0495629_0009489 | |||
| 306 | Ga0495629_0010904 | |||
| 307 | Ga0495629_0059925 | |||
| 308 | Ga0495629_0166312 | |||
| 309 | Ga0495651_0000452 | |||
| 310 | Ga0495651_0020939 | |||
| 311 | Ga0495651_0022340 | |||
| 312 | Ga0495653_0213538 | |||
| 313 | Ga0495580_0001834 | |||
| 314 | Ga0495605_0025221 | |||
| 315 | Ga0495662_0000295 | |||
| 316 | Ga0495662_0006538 | |||
| 317 | Ga0495664_0001031 | |||
| 318 | Ga0495585_0012963 | |||
| 319 | Ga0495594_0000428 | |||
| 320 | Ga0495594_0005776 | |||
| 321 | Ga0495594_0007710 | |||
| 322 | Ga0495594_0016960 | |||
| 323 | Ga0495606_0020817 | |||
| 324 | Ga0495610_0073866 | |||
| 325 | Ga0495618_0008838 | |||
| 326 | Ga0495628_0002923 | |||
| 327 | Ga0495628_0005393 | |||
| 328 | Ga0495628_0040640 | |||
| 329 | Ga0495643_0001222 | |||
| 330 | Ga0495648_0039205 | |||
| 331 | Ga0495648_0076340 | |||
| 332 | Ga0495642_0051778 | |||
| 333 | Ga0495665_0002936 | |||
| 334 | Ga0495640_0003477 | |||
| 335 | Ga0495640_0014551 | |||
| 336 | Ga0495640_0065215 | |||
| 337 | Ga0495587_0005555 | |||
| 338 | Ga0495609_0022056 | |||
| 339 | Ga0495622_0019573 | |||
| 340 | Ga0495622_0087256 | |||
| 341 | Ga0495667_0041154 | |||
| 342 | Ga0495668_0010410 | |||
| 343 | Ga0495668_0034926 | |||
| 344 | Ga0495634_0003955 | |||
| 345 | Ga0495625_0005546 | |||
| 346 | Ga0495625_0040710 | |||
| 347 | Ga0495635_0014906 | |||
| 348 | Ga0495661_0035469 | |||
| 349 | Ga0495588_0002446 | |||
| 350 | Ga0495588_0004766 | |||
| 351 | Ga0495657_0012517 | |||
| 352 | Ga0495657_0036692 | |||
| 353 | Ga0495657_0064035 | |||
| 354 | Ga0495599_0165066 | |||
| 355 | Ga0495646_0096720 | |||
| 356 | Ga0495613_0000838 | |||
| 357 | Ga0495613_0001939 | |||
| 358 | Ga0495613_0023816 | |||
| 359 | Ga0495671_0001482 | |||
| 360 | Ga0495649_0024603 | |||
| 361 | Ga0495649_0129218 | |||
| 362 | Ga0495589_0003955 | |||
| 363 | Ga0495589_0027124 | |||
| 364 | Ga0495589_0091569 | |||
| 365 | Ga0495600_0019879 | |||
| 366 | Ga0495581_0005613 | |||
| 367 | Ga0495581_0023168 | |||
| 368 | Ga0495604_0000385 | |||
| 369 | Ga0495604_0002116 | |||
| 370 | Ga0495604_0017869 | |||
| 371 | Ga0495636_0005283 | |||
| 372 | Ga0495636_0019694 | |||
| 373 | Ga0495636_0039178 | |||
| 374 | Ga0495674_0060208 | |||
| 375 | Ga0495672_0072099 | |||
| 376 | Ga0495676_0001764 | |||
| 377 | Ga0495676_0003282 | |||
| 378 | Ga0495676_0005280 | |||
| 379 | Ga0495676_0027746 | |||
| 380 | Ga0495676_0060317 | |||
| 381 | Ga0495676_0071376 | |||
| 382 | Ga0495687_001477 | |||
| 383 | Ga0495687_026854 | |||
| 384 | Ga0495675_0028558 | |||
| 385 | Ga0495685_033651 | |||
| 386 | Ga0495681_0002042 | |||
| 387 | Ga0495684_0028066 | |||
| 388 | Ga0495686_0058265 | |||
| 389 | Ga0495593_0007827 | |||
| 390 | Ga0495593_0018694 | |||
| 391 | Ga0495614_0000688 | |||
| 392 | Ga0495614_0043727 | |||
| 393 | Ga0496109_0007729 | |||
| 394 | Ga0501032_0019285 | |||
| 395 | Ga0501033_0111161 | |||
| 396 | Ga0501034_0018555 | |||
| 397 | Ga0501034_0073351 | |||
| 398 | Ga0501036_0032051 | |||
| 399 | Ga0501038_0004597 | |||
| 400 | Ga0501038_0009232 | |||
| 401 | Ga0501038_0208785 | |||
| 402 | Ga0501043_0159439 | |||
| 403 | Ga0501046_0034665 | |||
| 404 | Ga0501047_0000427 | |||
| 405 | Ga0501047_0038467 | |||
| 406 | Ga0501047_0118752 | |||
| 407 | Ga0501035_0211622 | |||
| 408 | Ga0501044_0130923 | |||
| 409 | Ga0501044_0151331 | |||
| 410 | Ga0495601_0016126 | |||
| 411 | Ga0495655_0007828 | |||
| 412 | Ga0500640_003809 | |||
| 413 | Ga0500560_005764 | |||
| 414 | Ga0466962_0000156 | |||
| 415 | 2547411655 | |||
| 416 | 2554257021 | |||
| 417 | 2585298088 | |||
| 418 | 2585305128 | |||
| 419 | 2616701465 | |||
| 420 | 2616903605 | |||
| 421 | 2643899690 | |||
| 422 | 2644403658 | |||
| 423 | 2644435346 | |||
| 424 | 2644437604 | |||
| 425 | 2644627938 | |||
| 426 | 2785370497 | |||
| 427 | 2786671654 | |||
| 428 | 2793984126 | |||
| 429 | 2804845832 | |||
| 430 | 2808843059 | |||
| 431 | 2811845343 | |||
| 432 | 2812357064 | |||
| 433 | 2819698282 | |||
| 434 | 2852640073 | |||
| 435 | 2862179508 | |||
| 436 | 2862286685 | |||
| 437 | 2862296078 | |||
| 438 | 2862578426 | |||
| 439 | 2867372991 | |||
| 440 | 2867435718 | |||
| 441 | 2873154939 | |||
| 442 | 2875394660 | |||
| 443 | 2877680123 | |||
| 444 | 2877682430 | |||
| 445 | 2912718713 | |||
| 446 | 2918504597 | |||
| 447 | 2919471475 | |||
| 448 | 2935392637 | |||
| 449 | 2946049975 | |||
| 450 | 2946068814 | |||
| 451 | 2946076860 | |||
| 452 | 2947228096 | |||
| 453 | 2954677940 | |||
| 454 | 2954686217 | |||
| 455 | 2954695874 | |||
| 456 | 2954711065 | |||
| 457 | 2954715278 | |||
| 458 | 2954725219 | |||
| 459 | 2954736597 | |||
| 460 | 2954744152 | |||
| 461 | 2954755446 | |||
| 462 | 2954763095 | |||
| 463 | 2997454257 | |||
| 464 | 2997600265 | |||
| 465 | 3006498241 | |||
| 466 | 8008566246 | |||
| 467 | 8008578050 | |||
| 468 | 8023624741 | |||
| 469 | 8025418508 | |||
| 470 | 8025538129 | |||
| 471 | 8033687750 | |||
| 472 | 8047897919 | |||
| 473 | 8048360975 | |||
| 474 | 8048374882 | |||
| 475 | 8048383340 | |||
| 476 | 8054165874 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3pj0-assembly2.cif.gz_C | crystal structure of a putative l-allo-threonine aldolase (lmo0305) from listeria monocytogenes egd-e at 1.80 a resolution | 0.9337 | 13 | 373 |
| 3lws-assembly3.cif.gz_E | crystal structure of putative aromatic amino acid beta-eliminating lyase/threonine aldolase. (yp_001813866.1) from exiguobacterium sp. 255-15 at 2.00 a resolution | 0.9298 | 12 | 376 |
| 3pj0-assembly2.cif.gz_C | crystal structure of a putative l-allo-threonine aldolase (lmo0305) from listeria monocytogenes egd-e at 1.80 a resolution | 0.9236 | 13 | 373 |
| 3lws-assembly3.cif.gz_E | crystal structure of putative aromatic amino acid beta-eliminating lyase/threonine aldolase. (yp_001813866.1) from exiguobacterium sp. 255-15 at 2.00 a resolution | 0.9223 | 12 | 376 |
| 1jg8-assembly1.cif.gz_A | crystal structure of threonine aldolase (low-specificity) | 0.8381 | 39 | 373 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3lwsE01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9393 | 37 | 265 | 3.40.640.10 |
| af_A0A1D6EP40_204_303_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9265 | 168 | 264 | 3.40.640.10 |
| af_A0A1D6EP40_204_303_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.892 | 168 | 264 | 3.40.640.10 |
| 1jg8A01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.8583 | 31 | 266 | 3.40.640.10 |
| 3lwsE01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.8546 | 37 | 265 | 3.40.640.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A429GZH2-F1-model_v4 | deleted | 0.9872 | 2 | 383 |
|
| AF-A0A6B2SAL6-F1-model_v4 | Threonine aldolase | 0.9864 | 6 | 377 |
GO:0005829
GO:0006545 GO:0006567 GO:0008732 |
| AF-K4R5T5-F1-model_v4 | Threonine aldolase | 0.9851 | 2 | 379 |
GO:0005829
GO:0006545 GO:0006567 GO:0008732 |
| AF-A0A1D7YBB7-F1-model_v4 | Threonine aldolase | 0.9847 | 3 | 376 |
GO:0005829
GO:0006545 GO:0006567 GO:0008732 |
| AF-A0A429GZH2-F1-model_v4 | deleted | 0.9821 | 2 | 383 |
|