F351217

General Info

Members Datasets Scaffolds Average Seq Length
238 167 476 326

Family's Representative Sequence

Representative Sequence 3300044765|Ga0466970_0035719|Ga0466970_0035719_1331_2401
Length 356
Sequence MTAPDLTATPLDEADGAPVLEVEDLSVSFGTEQGTVSAVDRVGLRLMPGEIVGVVGESGCGKSVTAMSLAGLLPGTARVSGSVRLRGTELIGAREPDLRRVRGKEIAYVFQEPMSSLNPVLTVGRQITEVLQVHEKLSRRAARERAVELLTLVGIPSPRTRVDDHPHQLSGGMRQRVMIAMAVACGPKVLVADEPTTALDVTVQAGILEVLRGLRDRLGTSILVITHDLGVIADIADRVVVMYAGRVVEQAPVGELFARPAHRYTAGLLAASPTPGRHAGTDRLQEIPGLVPVLSSQPDACTFAERCPAADDQCRSWAPPLAEVAGRPAAPPPGGHLAACWHPCPPEHATTEGPPA

Samples

Sample ID Description Type Environment
1 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
20 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
21 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
22 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
27 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
35 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
36 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
39 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
59 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
60 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
61 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
62 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
63 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
64 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
65 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
66 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
67 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
68 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
69 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
70 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
71 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
72 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
73 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
74 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
75 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
76 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
77 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
78 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
79 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
80 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
81 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
82 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
83 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
84 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
85 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
86 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
87 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
88 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
89 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
90 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
91 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
92 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
93 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
94 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
95 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
96 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
97 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
98 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
99 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
100 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
101 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
102 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
103 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
104 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
105 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
106 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
107 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
108 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
109 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
110 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
111 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
112 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
113 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
114 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
115 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
116 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
117 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
118 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
119 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
120 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
121 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
122 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
123 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
124 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
125 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
126 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
127 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
128 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
129 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
131 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
134 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
135 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
136 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
137 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
138 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
139 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
140 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
141 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
142 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
143 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
144 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
145 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
146 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
147 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
148 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
149 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
150 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
151 2858882152 Micromonospora noduli MED15 Isolate Nodule
152 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
153 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
154 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
155 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
156 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
157 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
158 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
159 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
160 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
161 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
162 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
163 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
164 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
165 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
166 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
167 8054734606 Micromonospora hortensis NIE111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 88.66
Metatranscriptomes 2.1
Isolates 9.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.26
Nodule 2.1
Rhizoplane 7.56
Rhizosphere 82.77
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466970_0035719 3300044765 Bacteria 2633
2 Ga0070658_10065556 3300005327 Bacteria 2964
3 Ga0070683_100248712 3300005329 Bacteria 1691
4 Ga0070660_100022877 3300005339 Bacteria 4627
5 Ga0070708_100181956 3300005445 Bacteria 1965
6 Ga0070681_10089653 3300005458 Bacteria 3027
7 Ga0070681_10150852 3300005458 Bacteria 2250
8 Ga0070706_100142653 3300005467 Bacteria 2236
9 Ga0070707_100144243 3300005468 Bacteria 2318
10 Ga0070698_100022652 3300005471 Bacteria 6569
11 Ga0070679_100031030 3300005530 Bacteria 5280
12 Ga0068855_100134424 3300005563 Bacteria 2822
13 Ga0068857_100038325 3300005577 Bacteria 4245
14 Ga0068856_100450416 3300005614 Bacteria 1308
15 Ga0070702_100004829 3300005615 Bacteria 6196
16 Ga0068852_100270057 3300005616 Bacteria 1636
17 Ga0068852_100339391 3300005616 Bacteria 1464
18 Ga0068864_100010468 3300005618 Bacteria 7662
19 Ga0068863_100021331 3300005841 Bacteria 6182
20 Ga0081455_10067325 3300005937 Bacteria 2985
21 Ga0081538_10000533 3300005981 Bacteria 42010
22 Ga0075364_10065096 3300006051 Bacteria 2393
23 Ga0070712_100058764 3300006175 Bacteria 2706
24 Ga0068871_100549445 3300006358 Bacteria 1046
25 Ga0075428_100062162 3300006844 Bacteria 4089
26 Ga0075430_100020435 3300006846 Bacteria 5632
27 Ga0075433_10018101 3300006852 Bacteria 5849
28 Ga0075434_100015575 3300006871 Bacteria 7297
29 Ga0075436_100003798 3300006914 Bacteria 10360
30 Ga0075435_100003615 3300007076 Bacteria 10520
31 Ga0105240_10028648 3300009093 Bacteria 7270
32 Ga0114129_10012421 3300009147 Bacteria 12124
33 Ga0114129_10124080 3300009147 Bacteria 3552
34 Ga0114129_10275564 3300009147 Bacteria 2249
35 Ga0105248_10079005 3300009177 Bacteria 3697
36 Ga0157370_10039568 3300013104 Bacteria 4556
37 Ga0157370_10091270 3300013104 Bacteria 2860
38 Ga0157369_10049997 3300013105 Bacteria 4530
39 Ga0157369_10054006 3300013105 Bacteria 4339
40 Ga0157378_10630091 3300013297 Bacteria 1086
41 Ga0163163_10003030 3300014325 Bacteria 14238
42 Ga0197907_10321859 3300020069 Bacteria 1872
43 Ga0206356_10392349 3300020070 Bacteria 2875
44 Ga0206356_11357780 3300020070 Bacteria 1965
45 Ga0206354_10550846 3300020081 Bacteria 3091
46 Ga0206353_10530754 3300020082 Bacteria 4835
47 Ga0207699_10058413 3300025906 Bacteria 2307
48 Ga0207705_10024444 3300025909 Bacteria 4311
49 Ga0207684_10065295 3300025910 Bacteria 3090
50 Ga0207707_10082583 3300025912 Bacteria 2805
51 Ga0207707_10177417 3300025912 Bacteria 1861
52 Ga0207695_10106229 3300025913 Bacteria 2794
53 Ga0207693_10014697 3300025915 Bacteria 6289
54 Ga0207693_10107960 3300025915 Bacteria 2183
55 Ga0207660_10010619 3300025917 Bacteria 5982
56 Ga0207657_10006679 3300025919 Bacteria 11929
57 Ga0207649_10297982 3300025920 Bacteria 1178
58 Ga0207652_10010057 3300025921 Bacteria 7620
59 Ga0207687_10336895 3300025927 Bacteria 1225
60 Ga0207664_10010527 3300025929 Bacteria 6532
61 Ga0207664_10155844 3300025929 Bacteria 1944
62 Ga0207664_10337254 3300025929 Bacteria 1332
63 Ga0207661_10100430 3300025944 Bacteria 2429
64 Ga0207667_10022194 3300025949 Bacteria 7020
65 Ga0207703_10270074 3300026035 Bacteria 1540
66 Ga0207702_10244474 3300026078 Bacteria 1683
67 Ga0207676_10005426 3300026095 Bacteria 9024
68 Ga0207698_10036472 3300026142 Bacteria 3610
69 Ga0207428_10010105 3300027907 Bacteria 8442
70 Ga0373944_0013754 3300035089 Bacteria 2250
71 Ga0373945_0013373 3300035116 Bacteria 2737
72 Ga0373943_0004042 3300035170 Bacteria 6668
73 Ga0373946_0003596 3300035171 Bacteria 5497
74 Ga0373955_0169118 3300035172 Bacteria 1293
75 Ga0373935_0050075 3300035692 Bacteria 2650
76 Ga0373935_0145491 3300035692 Bacteria 1604
77 Ga0373947_0004748 3300035725 Bacteria 7969
78 Ga0373937_0012530 3300036401 Bacteria 7460
79 Ga0373937_0103439 3300036401 Bacteria 2645
80 Ga0373937_0111645 3300036401 Bacteria 2543
81 Ga0395899_0001885 3300037312 Bacteria 17305
82 Ga0395899_0011025 3300037312 Bacteria 6922
83 Ga0395899_0039737 3300037312 Bacteria 3520
84 Ga0395899_0145165 3300037312 Bacteria 1685
85 Ga0395900_0002215 3300037418 Bacteria 21712
86 Ga0395900_0025963 3300037418 Bacteria 5998
87 Ga0395900_0180627 3300037418 Bacteria 2144
88 Ga0395900_0210268 3300037418 Bacteria 1964
89 Ga0395898_0012778 3300037466 Bacteria 8670
90 Ga0395898_0089304 3300037466 Bacteria 2965
91 Ga0395898_0092482 3300037466 Bacteria 2908
92 Ga0395898_0096845 3300037466 Bacteria 2834
93 Ga0395898_0532359 3300037466 Bacteria 1117
94 Ga0395905_0002136 3300037471 Bacteria 22428
95 Ga0395905_0014186 3300037471 Bacteria 7612
96 Ga0395905_0028286 3300037471 Bacteria 5284
97 Ga0395905_0063338 3300037471 Bacteria 3459
98 Ga0395905_0087031 3300037471 Bacteria 2929
99 Ga0395901_0000391 3300038443 Bacteria 52295
100 Ga0395901_0006443 3300038443 Bacteria 11895
101 Ga0395901_0008421 3300038443 Bacteria 10423
102 Ga0395901_0046985 3300038443 Bacteria 4484
103 Ga0395901_0051778 3300038443 Bacteria 4268
104 Ga0395901_0152746 3300038443 Bacteria 2425
105 Ga0395901_0233323 3300038443 Bacteria 1921
106 Ga0395901_0348924 3300038443 Bacteria 1527
107 Ga0395901_0357854 3300038443 Bacteria 1506
108 Ga0439454_004274 3300042011 Bacteria 1637
109 Ga0466966_0071272 3300044684 Bacteria 2178
110 Ga0466963_0007294 3300044694 Bacteria 6592
111 Ga0466963_0009619 3300044694 Bacteria 5826
112 Ga0466963_0133203 3300044694 Bacteria 1718
113 Ga0466963_0163262 3300044694 Bacteria 1551
114 Ga0466957_0004307 3300044842 Bacteria 7900
115 Ga0466957_0034215 3300044842 Bacteria 3049
116 Ga0466957_0055483 3300044842 Bacteria 2422
117 Ga0466960_0009868 3300044901 Bacteria 3948
118 Ga0466958_0085819 3300045836 Bacteria 1942
119 Ga0466967_0003135 3300045976 Bacteria 10648
120 Ga0466967_0008956 3300045976 Bacteria 7390
121 Ga0466967_0024639 3300045976 Bacteria 4951
122 Ga0466967_0029129 3300045976 Bacteria 4617
123 Ga0466967_0075774 3300045976 Bacteria 3024
124 Ga0466967_0090997 3300045976 Bacteria 2772
125 Ga0466967_0320200 3300045976 Bacteria 1495
126 Ga0466967_0348681 3300045976 Bacteria 1433
127 Ga0466967_0622720 3300045976 Bacteria 1066
128 Ga0495592_0040013 3300046454 Bacteria 3519
129 Ga0495592_0150618 3300046454 Bacteria 1609
130 Ga0495629_0000079 3300046459 Bacteria 85673
131 Ga0495641_0000806 3300046461 Bacteria 26604
132 Ga0495651_0020692 3300046462 Bacteria 5108
133 Ga0495653_0012332 3300046463 Bacteria 6973
134 Ga0495653_0048657 3300046463 Bacteria 3272
135 Ga0495582_0001234 3300046473 Bacteria 14403
136 Ga0495639_0005303 3300046475 Bacteria 5549
137 Ga0495662_0024472 3300046476 Bacteria 2913
138 Ga0495608_0006103 3300046511 Bacteria 8550
139 Ga0495608_0057237 3300046511 Bacteria 2573
140 Ga0495608_0198596 3300046511 Bacteria 1264
141 Ga0495618_0044515 3300046514 Bacteria 2800
142 Ga0495628_0202718 3300046516 Bacteria 1494
143 Ga0495628_0237707 3300046516 Bacteria 1363
144 Ga0495630_0019945 3300046517 Bacteria 4936
145 Ga0495666_0089369 3300046526 Bacteria 1454
146 Ga0495652_0084981 3300046529 Bacteria 2601
147 Ga0495652_0096225 3300046529 Bacteria 2412
148 Ga0495665_0000308 3300046531 Bacteria 24739
149 Ga0495665_0082435 3300046531 Bacteria 1691
150 Ga0495640_0004264 3300046533 Bacteria 11434
151 Ga0495645_0067454 3300046543 Bacteria 2583
152 Ga0495667_0009057 3300046559 Bacteria 6764
153 Ga0495667_0014545 3300046559 Bacteria 5316
154 Ga0495667_0085715 3300046559 Bacteria 2044
155 Ga0495634_0039054 3300046642 Bacteria 3234
156 Ga0495635_0031592 3300046663 Bacteria 3675
157 Ga0495657_0033410 3300046675 Bacteria 3582
158 Ga0495599_0049855 3300046678 Bacteria 2624
159 Ga0495647_0005098 3300046681 Bacteria 4302
160 Ga0495658_0012830 3300046683 Bacteria 4255
161 Ga0495613_0005586 3300046689 Bacteria 9439
162 Ga0495613_0171003 3300046689 Bacteria 1542
163 Ga0495624_0050009 3300046690 Bacteria 2649
164 Ga0495600_0027332 3300046809 Bacteria 3686
165 Ga0495581_0000733 3300047315 Bacteria 17360
166 Ga0495604_0112954 3300047317 Bacteria 1978
167 Ga0495674_0001328 3300047319 Bacteria 24089
168 Ga0495674_0104256 3300047319 Bacteria 2410
169 Ga0495676_0004417 3300047321 Bacteria 12857
170 Ga0495680_0014279 3300047322 Bacteria 6885
171 Ga0495680_0115459 3300047322 Bacteria 1986
172 Ga0495680_0241879 3300047322 Bacteria 1281
173 Ga0495684_0023542 3300047471 Bacteria 4735
174 Ga0495684_0160675 3300047471 Bacteria 1676
175 Ga0495593_0002864 3300047673 Bacteria 10398
176 Ga0495602_0062592 3300048088 Bacteria 3228
177 Ga0495614_0052090 3300048089 Bacteria 1754
178 Ga0496102_0047640 3300048905 Bacteria 3896
179 Ga0496103_0023912 3300048906 Bacteria 3685
180 Ga0496104_0101826 3300048907 Bacteria 2750
181 Ga0496105_0034456 3300048908 Bacteria 4164
182 Ga0496105_0054245 3300048908 Bacteria 3310
183 Ga0496106_0255841 3300048909 Bacteria 1401
184 Ga0496107_0208210 3300048910 Bacteria 1454
185 Ga0496108_0019162 3300048911 Bacteria 5616
186 Ga0496109_0019463 3300048912 Bacteria 5989
187 Ga0496110_0024043 3300048913 Bacteria 5191
188 Ga0496111_0010384 3300048914 Bacteria 6246
189 Ga0496112_0022954 3300048915 Bacteria 5953
190 Ga0496112_0370837 3300048915 Bacteria 1373
191 Ga0496113_0023249 3300048916 Bacteria 4394
192 Ga0496114_0029607 3300048917 Bacteria 4503
193 Ga0496114_0033165 3300048917 Bacteria 4253
194 Ga0496115_0004495 3300048918 Bacteria 10092
195 Ga0496115_0036948 3300048918 Bacteria 3869
196 Ga0501039_0279952 3300049575 Bacteria 1311
197 Ga0501070_0000318 3300049586 Bacteria 43769
198 Ga0501074_0189395 3300049590 Bacteria 1467
199 Ga0501080_0039035 3300049742 Bacteria 4431
200 nmdc:mga00v17_66369_c1 3300050491 Bacteria 2228
201 nmdc:mga0yw44_23756_c1 3300050492 Bacteria 3458
202 nmdc:mga05p37_135036_c1 3300050507 Bacteria 3027
203 nmdc:mga05p37_379619_c1 3300050507 Bacteria 1656
204 nmdc:mga0qj67_20362_c1 3300050509 Bacteria 5077
205 nmdc:mga0qj67_36280_c1 3300050509 Bacteria 3857
206 nmdc:mga06r32_78016_c1 3300050510 Bacteria 3219
207 nmdc:mga08y16_484746_c1 3300050511 Bacteria 1258
208 nmdc:mga08y16_50851_c1 3300050511 Bacteria 4337
209 nmdc:mga0n895_35528_c1 3300050512 Bacteria 4806
210 nmdc:mga0rr50_16897_c1 3300050513 Bacteria 4859
211 nmdc:mga0a205_14938_c1 3300050515 Bacteria 7245
212 Ga0495601_0022426 3300053077 Bacteria 3875
213 Ga0495595_0038454 3300053084 Bacteria 2180
214 Ga0495619_0060621 3300053085 Bacteria 2515
215 Ga0495619_0066840 3300053085 Bacteria 2399
216 Ga0501084_0131604 3300054114 Bacteria 2106
217 2676483325 2675903059 Bacteria 8644972
218 2855670818 2855670206 Bacteria 7120389
219 2855677745 2855676851 Bacteria 7063653
220 2857293941 2857288857 Bacteria 7189066
221 2858849277 2858848962 Bacteria 6963058
222 2858882559 2858882152 Bacteria 7230291
223 2858894741 2858888857 Bacteria 7060307
224 2858899706 2858895516 Bacteria 7378898
225 2867305665 2867302475 Bacteria 7087181
226 2867315121 2867312974 Bacteria 7058875
227 2867319882 2867319477 Bacteria 7069771
228 2869051458 2869048445 Bacteria 6875584
229 2869065522 2869061728 Bacteria 7112407
230 2869069718 2869068681 Bacteria 7205615
231 2880490811 2880489317 Bacteria 7096270
232 2880501732 2880495981 Bacteria 7340502
233 2929223812 2929219909 Bacteria 6984360
234 2929230217 2929226422 Bacteria 7248583
235 8003833527 8003830390 Bacteria 6541657
236 8054705818 8054704163 Bacteria 7247792
237 8054728948 8054727385 Bacteria 7558670
238 8054734825 8054734606 Bacteria 6947278
239 Ga0466970_0035719
240 Ga0070658_10065556
241 Ga0070683_100248712
242 Ga0070660_100022877
243 Ga0070708_100181956
244 Ga0070681_10089653
245 Ga0070681_10150852
246 Ga0070706_100142653
247 Ga0070707_100144243
248 Ga0070698_100022652
249 Ga0070679_100031030
250 Ga0068855_100134424
251 Ga0068857_100038325
252 Ga0068856_100450416
253 Ga0070702_100004829
254 Ga0068852_100270057
255 Ga0068852_100339391
256 Ga0068864_100010468
257 Ga0068863_100021331
258 Ga0081455_10067325
259 Ga0081538_10000533
260 Ga0075364_10065096
261 Ga0070712_100058764
262 Ga0068871_100549445
263 Ga0075428_100062162
264 Ga0075430_100020435
265 Ga0075433_10018101
266 Ga0075434_100015575
267 Ga0075436_100003798
268 Ga0075435_100003615
269 Ga0105240_10028648
270 Ga0114129_10012421
271 Ga0114129_10124080
272 Ga0114129_10275564
273 Ga0105248_10079005
274 Ga0157370_10039568
275 Ga0157370_10091270
276 Ga0157369_10049997
277 Ga0157369_10054006
278 Ga0157378_10630091
279 Ga0163163_10003030
280 Ga0197907_10321859
281 Ga0206356_10392349
282 Ga0206356_11357780
283 Ga0206354_10550846
284 Ga0206353_10530754
285 Ga0207699_10058413
286 Ga0207705_10024444
287 Ga0207684_10065295
288 Ga0207707_10082583
289 Ga0207707_10177417
290 Ga0207695_10106229
291 Ga0207693_10014697
292 Ga0207693_10107960
293 Ga0207660_10010619
294 Ga0207657_10006679
295 Ga0207649_10297982
296 Ga0207652_10010057
297 Ga0207687_10336895
298 Ga0207664_10010527
299 Ga0207664_10155844
300 Ga0207664_10337254
301 Ga0207661_10100430
302 Ga0207667_10022194
303 Ga0207703_10270074
304 Ga0207702_10244474
305 Ga0207676_10005426
306 Ga0207698_10036472
307 Ga0207428_10010105
308 Ga0373944_0013754
309 Ga0373945_0013373
310 Ga0373943_0004042
311 Ga0373946_0003596
312 Ga0373955_0169118
313 Ga0373935_0050075
314 Ga0373935_0145491
315 Ga0373947_0004748
316 Ga0373937_0012530
317 Ga0373937_0103439
318 Ga0373937_0111645
319 Ga0395899_0001885
320 Ga0395899_0011025
321 Ga0395899_0039737
322 Ga0395899_0145165
323 Ga0395900_0002215
324 Ga0395900_0025963
325 Ga0395900_0180627
326 Ga0395900_0210268
327 Ga0395898_0012778
328 Ga0395898_0089304
329 Ga0395898_0092482
330 Ga0395898_0096845
331 Ga0395898_0532359
332 Ga0395905_0002136
333 Ga0395905_0014186
334 Ga0395905_0028286
335 Ga0395905_0063338
336 Ga0395905_0087031
337 Ga0395901_0000391
338 Ga0395901_0006443
339 Ga0395901_0008421
340 Ga0395901_0046985
341 Ga0395901_0051778
342 Ga0395901_0152746
343 Ga0395901_0233323
344 Ga0395901_0348924
345 Ga0395901_0357854
346 Ga0439454_004274
347 Ga0466966_0071272
348 Ga0466963_0007294
349 Ga0466963_0009619
350 Ga0466963_0133203
351 Ga0466963_0163262
352 Ga0466957_0004307
353 Ga0466957_0034215
354 Ga0466957_0055483
355 Ga0466960_0009868
356 Ga0466958_0085819
357 Ga0466967_0003135
358 Ga0466967_0008956
359 Ga0466967_0024639
360 Ga0466967_0029129
361 Ga0466967_0075774
362 Ga0466967_0090997
363 Ga0466967_0320200
364 Ga0466967_0348681
365 Ga0466967_0622720
366 Ga0495592_0040013
367 Ga0495592_0150618
368 Ga0495629_0000079
369 Ga0495641_0000806
370 Ga0495651_0020692
371 Ga0495653_0012332
372 Ga0495653_0048657
373 Ga0495582_0001234
374 Ga0495639_0005303
375 Ga0495662_0024472
376 Ga0495608_0006103
377 Ga0495608_0057237
378 Ga0495608_0198596
379 Ga0495618_0044515
380 Ga0495628_0202718
381 Ga0495628_0237707
382 Ga0495630_0019945
383 Ga0495666_0089369
384 Ga0495652_0084981
385 Ga0495652_0096225
386 Ga0495665_0000308
387 Ga0495665_0082435
388 Ga0495640_0004264
389 Ga0495645_0067454
390 Ga0495667_0009057
391 Ga0495667_0014545
392 Ga0495667_0085715
393 Ga0495634_0039054
394 Ga0495635_0031592
395 Ga0495657_0033410
396 Ga0495599_0049855
397 Ga0495647_0005098
398 Ga0495658_0012830
399 Ga0495613_0005586
400 Ga0495613_0171003
401 Ga0495624_0050009
402 Ga0495600_0027332
403 Ga0495581_0000733
404 Ga0495604_0112954
405 Ga0495674_0001328
406 Ga0495674_0104256
407 Ga0495676_0004417
408 Ga0495680_0014279
409 Ga0495680_0115459
410 Ga0495680_0241879
411 Ga0495684_0023542
412 Ga0495684_0160675
413 Ga0495593_0002864
414 Ga0495602_0062592
415 Ga0495614_0052090
416 Ga0496102_0047640
417 Ga0496103_0023912
418 Ga0496104_0101826
419 Ga0496105_0034456
420 Ga0496105_0054245
421 Ga0496106_0255841
422 Ga0496107_0208210
423 Ga0496108_0019162
424 Ga0496109_0019463
425 Ga0496110_0024043
426 Ga0496111_0010384
427 Ga0496112_0022954
428 Ga0496112_0370837
429 Ga0496113_0023249
430 Ga0496114_0029607
431 Ga0496114_0033165
432 Ga0496115_0004495
433 Ga0496115_0036948
434 Ga0501039_0279952
435 Ga0501070_0000318
436 Ga0501074_0189395
437 Ga0501080_0039035
438 nmdc:mga00v17_66369_c1
439 nmdc:mga0yw44_23756_c1
440 nmdc:mga05p37_135036_c1
441 nmdc:mga05p37_379619_c1
442 nmdc:mga0qj67_20362_c1
443 nmdc:mga0qj67_36280_c1
444 nmdc:mga06r32_78016_c1
445 nmdc:mga08y16_484746_c1
446 nmdc:mga08y16_50851_c1
447 nmdc:mga0n895_35528_c1
448 nmdc:mga0rr50_16897_c1
449 nmdc:mga0a205_14938_c1
450 Ga0495601_0022426
451 Ga0495595_0038454
452 Ga0495619_0060621
453 Ga0495619_0066840
454 Ga0501084_0131604
455 2676483325
456 2855670818
457 2855677745
458 2857293941
459 2858849277
460 2858882559
461 2858894741
462 2858899706
463 2867305665
464 2867315121
465 2867319882
466 2869051458
467 2869065522
468 2869069718
469 2880490811
470 2880501732
471 2929223812
472 2929230217
473 8003833527
474 8054705818
475 8054728948
476 8054734825

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

248

314

0.98

PF00005

ABC_tran

ABC transporter

39

197

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7z17-assembly1.cif.gz_J e. coli c-p lyase bound to a phnk abc dimer in an open conformation 0.941 3 259
7z17-assembly1.cif.gz_J e. coli c-p lyase bound to a phnk abc dimer in an open conformation 0.9373 3 259
7z19-assembly1.cif.gz_I e. coli c-p lyase bound to a single phnk abc domain 0.9316 3 259
4fwi-assembly1.cif.gz_B crystal structure of the nucleotide-binding domain of a dipeptide abc transporter 0.9288 3 320
7z19-assembly1.cif.gz_I e. coli c-p lyase bound to a single phnk abc domain 0.928 3 259
ID Description Score Start End Superfamily
af_Q2G1F8_1_274_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9727 3 268 3.40.50.300
af_P75796_10_305_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9655 4 271 3.40.50.300
af_P9WQJ5_2_332_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9634 3 320 3.40.50.300
af_P33916_3_268_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9588 3 266 3.40.50.300
af_Q2FZR5_3_331_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9553 3 320 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7C5JWM0-F1-model_v4 ABC transporter ATP-binding protein 0.9777 4 115 GO:0005524
GO:0016887
AF-A0A2V9VRE8-F1-model_v4 AAA+ ATPase domain-containing protein 0.9739 24 169 GO:0005524
GO:0016887
AF-A0A352SRK6-F1-model_v4 Peptide ABC transporter ATP-binding protein 0.9722 1 171 GO:0005524
GO:0005886
GO:0016887
AF-A0A7X9KIM3-F1-model_v4 ABC transporter ATP-binding protein 0.9705 2 165 GO:0005524
GO:0005886
GO:0016887
AF-A0A3N1KYJ0-F1-model_v4 Peptide/nickel transport system ATP-binding protein 0.9686 2 260 GO:0005524
GO:0005886
GO:0015833
GO:0016887

Map