F350686

General Info

Members Datasets Scaffolds Average Seq Length
238 156 476 385

Family's Representative Sequence

Representative Sequence 3300005366|Ga0070659_100012988|Ga0070659_1000129881
Length 457
Sequence MNFCRKRAASTAELVIIVLALFMPCQDLCWLGLTFIAISLYLITVISGRNGRIFSYQNLKGTVNMDMDFKQLSVAIRAIAEEKNLPEATVQEVVEQALAAAYRRDYGDREQEVRVTMNLNTGDVDAYVTKDIVDDVEDPSYQISVKDASVMRKDAKVGETVEVHEKVSSFGRVAAQTAKQVILQRLREAEREIVMEEYQDKINTVINVLVSRVEGTIVRIDLGHAQGIMPKSEQIQGERYYPGQRLKVYLKDVERGPRGPQLVVSRGNTQFIEWLFRSEVPEMESGAVDIKGIAREAGVRSKIAVHSNVQGVDPVGTFVGGHGTRVNAVVSEVGEQEKIDIVVWSDNTVDYIKNALSPTKVSKVVLDEARKSARVIVPEDQLSIAIGKSGQNVRLASKLTGYELDIEAEKGTTSEEPKDTEAAPVAVPVKPAAPKLKKKSELEDSLLKAIEEQGESQ

Samples

Sample ID Description Type Environment
1 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
2 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
39 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
42 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
43 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
59 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
66 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
92 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
96 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
97 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
98 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
99 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
100 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
101 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
104 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
105 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
106 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
107 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
108 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
109 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
110 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
113 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
114 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
123 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
124 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
125 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
126 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
127 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
128 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
129 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
130 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
131 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
132 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
133 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
134 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
135 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
136 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
137 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
138 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
139 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
140 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
141 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
142 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
143 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
144 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
145 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
146 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
147 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
148 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
149 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
150 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
151 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
152 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
153 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
154 3300053722 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 endosphere Metagenome Endosphere
155 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
156 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 24.37
Nodule 0
Rhizoplane 0.42
Rhizosphere 73.11
Stem 0
Stem Tuber 0
Unclassified 5.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070659_100012988 3300005366 Bacteria 6192
2 JGI24741J21665_1001251 3300001915 Bacteria 7471
3 JGI24740J21852_10011248 3300001979 Bacteria 3415
4 JGI24737J22298_10000228 3300001990 Bacteria 18575
5 JGI24735J21928_10001889 3300002067 Bacteria 7354
6 rootH2_10153880 3300003320 Unclassified 2341
7 rootL2_10123251 3300003322 Bacteria 6952
8 rootH1_10079468 3300003323 Bacteria 8011
9 Ga0070658_10000012 3300005327 Bacteria 277871
10 Ga0070658_10000015 3300005327 Bacteria 230579
11 Ga0070658_10001231 3300005327 Bacteria 21949
12 Ga0070658_10002596 3300005327 Bacteria 15044
13 Ga0070658_10103446 3300005327 Bacteria 2355
14 Ga0070676_10073876 3300005328 Unclassified 2052
15 Ga0070683_100000261 3300005329 Bacteria 36323
16 Ga0070670_100082968 3300005331 Bacteria 2754
17 Ga0070680_100062760 3300005336 Bacteria 3043
18 Ga0068868_100130831 3300005338 Bacteria 2053
19 Ga0070660_100001769 3300005339 Bacteria 14834
20 Ga0070660_100002681 3300005339 Bacteria 12231
21 Ga0070691_10017911 3300005341 Unclassified 3260
22 Ga0070671_100032065 3300005355 Bacteria 4345
23 Ga0070674_100001231 3300005356 Bacteria 13454
24 Ga0070673_100001360 3300005364 Bacteria 14303
25 Ga0070667_100000001 3300005367 Bacteria 1108638
26 Ga0070667_100003189 3300005367 Bacteria 14048
27 Ga0070678_100000234 3300005456 Bacteria 25286
28 Ga0070681_10342842 3300005458 Bacteria 1404
29 Ga0070685_10014676 3300005466 Bacteria 4152
30 Ga0070679_100001645 3300005530 Bacteria 20128
31 Ga0070679_100002235 3300005530 Bacteria 17482
32 Ga0070679_100029823 3300005530 Bacteria 5382
33 Ga0070679_100030169 3300005530 Bacteria 5353
34 Ga0070684_100001437 3300005535 Bacteria 17157
35 Ga0070684_100091498 3300005535 Bacteria 2706
36 Ga0068853_100134782 3300005539 Bacteria 2213
37 Ga0070672_100111729 3300005543 Bacteria 2228
38 Ga0070665_100060387 3300005548 Bacteria 3800
39 Ga0068855_100000003 3300005563 Bacteria 589862
40 Ga0068855_100001675 3300005563 Bacteria 27736
41 Ga0068855_100003159 3300005563 Bacteria 20166
42 Ga0068855_100110927 3300005563 Bacteria 3149
43 Ga0068857_100000002 3300005577 Bacteria 241401
44 Ga0068857_100019578 3300005577 Bacteria 5945
45 Ga0068856_100000001 3300005614 Bacteria 565602
46 Ga0068863_100086716 3300005841 Bacteria 2966
47 Ga0068863_100107051 3300005841 Bacteria 2660
48 Ga0068858_100338939 3300005842 Bacteria 1439
49 Ga0068860_100082626 3300005843 Bacteria 3055
50 Ga0068862_100054727 3300005844 Bacteria 3416
51 Ga0081455_10000003 3300005937 Bacteria 367763
52 Ga0075365_10000220 3300006038 Bacteria 19254
53 Ga0075368_10009711 3300006042 Bacteria 3466
54 Ga0075362_10000303 3300006177 Bacteria 13912
55 Ga0075367_10000088 3300006178 Bacteria 24938
56 Ga0075369_10000005 3300006186 Bacteria 147699
57 Ga0075369_10000056 3300006186 Bacteria 28912
58 Ga0075366_10000001 3300006195 Bacteria 569172
59 Ga0075366_10000171 3300006195 Bacteria 27869
60 Ga0075366_10001401 3300006195 Bacteria 12070
61 Ga0075370_10018345 3300006353 Bacteria 3797
62 Ga0075428_100019385 3300006844 Bacteria 7529
63 Ga0075430_100009366 3300006846 Bacteria 8278
64 Ga0105240_10305411 3300009093 Bacteria 1819
65 Ga0111539_10001909 3300009094 Bacteria 27751
66 Ga0105245_10000001 3300009098 Bacteria 939270
67 Ga0105245_10001190 3300009098 Bacteria 23565
68 Ga0105245_10012971 3300009098 Bacteria 7263
69 Ga0105245_10048846 3300009098 Bacteria 3787
70 Ga0105245_10069900 3300009098 Unclassified 3185
71 Ga0105243_10000001 3300009148 Bacteria 1156578
72 Ga0105243_10061400 3300009148 Bacteria 3006
73 Ga0105241_10002073 3300009174 Bacteria 15150
74 Ga0105242_10000135 3300009176 Bacteria 53544
75 Ga0105242_10004190 3300009176 Bacteria 11242
76 Ga0105248_10339258 3300009177 Bacteria 1692
77 Ga0105237_10007202 3300009545 Bacteria 12213
78 Ga0105238_10005116 3300009551 Bacteria 12969
79 Ga0105238_10088656 3300009551 Unclassified 3080
80 Ga0105249_10101711 3300009553 Bacteria 2703
81 Ga0105028_100378 3300009993 Bacteria 4764
82 Ga0105239_10012130 3300010375 Bacteria 9610
83 Ga0157373_10000042 3300013100 Bacteria 113564
84 Ga0157371_10005566 3300013102 Bacteria 10594
85 Ga0157369_10003103 3300013105 Bacteria 19847
86 Ga0157369_10049375 3300013105 Bacteria 4562
87 Ga0157374_10000195 3300013296 Bacteria 56142
88 Ga0157374_10002313 3300013296 Bacteria 16059
89 Ga0157374_10012719 3300013296 Bacteria 7332
90 Ga0157374_10179941 3300013296 Bacteria 2065
91 Ga0157374_10303459 3300013296 Unclassified 1580
92 Ga0157378_10029270 3300013297 Bacteria 4862
93 Ga0157372_10000187 3300013307 Bacteria 68372
94 Ga0157372_10039660 3300013307 Bacteria 5199
95 Ga0163163_10011629 3300014325 Bacteria 7995
96 Ga0163163_10180432 3300014325 Bacteria 2158
97 Ga0163163_10312418 3300014325 Bacteria 1625
98 Ga0157377_10006548 3300014745 Bacteria 5562
99 Ga0157377_10059288 3300014745 Unclassified 2181
100 Ga0207647_10000506 3300025904 Bacteria 31217
101 Ga0207645_10096669 3300025907 Unclassified 1903
102 Ga0207705_10000011 3300025909 Bacteria 517768
103 Ga0207705_10000056 3300025909 Bacteria 157554
104 Ga0207705_10001580 3300025909 Bacteria 18100
105 Ga0207705_10001854 3300025909 Bacteria 16602
106 Ga0207705_10005754 3300025909 Bacteria 9251
107 Ga0207654_10000002 3300025911 Bacteria 1460142
108 Ga0207707_10010955 3300025912 Bacteria 7886
109 Ga0207707_10165140 3300025912 Bacteria 1935
110 Ga0207707_10190552 3300025912 Bacteria 1789
111 Ga0207695_10000005 3300025913 Bacteria 1196715
112 Ga0207695_10206540 3300025913 Bacteria 1876
113 Ga0207671_10070202 3300025914 Unclassified 2611
114 Ga0207660_10001351 3300025917 Bacteria 16443
115 Ga0207660_10054219 3300025917 Bacteria 2861
116 Ga0207660_10107388 3300025917 Bacteria 2095
117 Ga0207657_10004283 3300025919 Bacteria 15119
118 Ga0207657_10024353 3300025919 Bacteria 5609
119 Ga0207652_10001980 3300025921 Bacteria 17726
120 Ga0207652_10005637 3300025921 Bacteria 10158
121 Ga0207652_10060592 3300025921 Bacteria 3265
122 Ga0207652_10186028 3300025921 Bacteria 1867
123 Ga0207694_10188015 3300025924 Unclassified 1677
124 Ga0207650_10063458 3300025925 Bacteria 2762
125 Ga0207687_10000030 3300025927 Bacteria 155548
126 Ga0207687_10001069 3300025927 Bacteria 18570
127 Ga0207687_10011710 3300025927 Bacteria 5737
128 Ga0207644_10000001 3300025931 Bacteria 1243214
129 Ga0207644_10021900 3300025931 Bacteria 4359
130 Ga0207690_10008357 3300025932 Bacteria 6145
131 Ga0207686_10000001 3300025934 Bacteria 1169580
132 Ga0207709_10000002 3300025935 Bacteria 1171536
133 Ga0207661_10000021 3300025944 Bacteria 205381
134 Ga0207661_10020443 3300025944 Bacteria 4949
135 Ga0207667_10000008 3300025949 Bacteria 625138
136 Ga0207667_10000466 3300025949 Bacteria 54272
137 Ga0207667_10012679 3300025949 Bacteria 9686
138 Ga0207651_10000191 3300025960 Bacteria 26637
139 Ga0207658_10000003 3300025986 Bacteria 1151934
140 Ga0207702_10000001 3300026078 Bacteria 895738
141 Ga0207641_10063004 3300026088 Bacteria 3166
142 Ga0207641_10152899 3300026088 Bacteria 2091
143 Ga0207674_10000001 3300026116 Bacteria 616581
144 Ga0207674_10063436 3300026116 Bacteria 3730
145 Ga0207683_10007035 3300026121 Bacteria 9648
146 Ga0209813_10003594 3300027866 Bacteria 3641
147 Ga0207428_10006981 3300027907 Bacteria 10343
148 Ga0268266_10001545 3300028379 Bacteria 26966
149 Ga0268264_10087991 3300028381 Bacteria 2672
150 Ga0265337_1008558 3300028556 Bacteria 3709
151 Ga0265319_1011237 3300028563 Bacteria 3680
152 Ga0265338_10000052 3300028800 Bacteria 209239
153 Ga0265331_10066138 3300031250 Unclassified 1698
154 Ga0265327_10004018 3300031251 Bacteria 13393
155 Ga0265327_10061477 3300031251 Bacteria 1916
156 Ga0395899_0012358 3300037312 Bacteria 6538
157 Ga0395899_0026329 3300037312 Bacteria 4389
158 Ga0395900_0000232 3300037418 Bacteria 87268
159 Ga0395900_0004371 3300037418 Bacteria 14994
160 Ga0395900_0088061 3300037418 Bacteria 3191
161 Ga0395900_0109937 3300037418 Bacteria 2832
162 Ga0395898_0003425 3300037466 Bacteria 17764
163 Ga0395898_0021849 3300037466 Bacteria 6482
164 Ga0395905_0000238 3300037471 Bacteria 83164
165 Ga0395905_0068708 3300037471 Bacteria 3318
166 Ga0395901_0018084 3300038443 Bacteria 7194
167 Ga0395901_0024989 3300038443 Bacteria 6131
168 Ga0395901_0060568 3300038443 Bacteria 3939
169 Ga0495629_0012226 3300046459 Bacteria 6217
170 Ga0495583_0032781 3300046506 Bacteria 2505
171 Ga0495622_0000082 3300046557 Bacteria 85266
172 Ga0495658_0001953 3300046683 Bacteria 10540
173 Ga0495600_0003845 3300046809 Bacteria 8906
174 Ga0495602_0147727 3300048088 Unclassified 1852
175 Ga0496112_0077681 3300048915 Bacteria 3283
176 Ga0496125_0144047 3300048928 Bacteria 1651
177 Ga0496126_0018475 3300048929 Bacteria 6908
178 Ga0501031_0000446 3300049568 Bacteria 23856
179 Ga0501032_0003078 3300049569 Bacteria 12878
180 Ga0501034_0010909 3300049571 Bacteria 9441
181 Ga0501036_0011927 3300049572 Bacteria 7205
182 Ga0501037_0001628 3300049573 Bacteria 16315
183 Ga0501046_0000922 3300049580 Bacteria 28825
184 Ga0501047_0000229 3300049581 Bacteria 66412
185 Ga0501047_0010162 3300049581 Bacteria 8899
186 Ga0501048_0014923 3300049582 Bacteria 5745
187 Ga0501070_0153495 3300049586 Bacteria 1899
188 Ga0501080_0008524 3300049742 Bacteria 9297
189 Ga0501035_0000033 3300049822 Bacteria 175087
190 Ga0501035_0011441 3300049822 Bacteria 8227
191 nmdc:mga03683_20_c2 3300050489 Bacteria 23288
192 nmdc:mga0yw44_2_c1 3300050492 Bacteria 586884
193 nmdc:mga0yw44_885_c1 3300050492 Bacteria 11271
194 nmdc:mga0k408_1061_c1 3300050493 Bacteria 15104
195 nmdc:mga0k408_1687_c1 3300050493 Bacteria 11931
196 nmdc:mga0k408_17_c2 3300050493 Bacteria 97852
197 nmdc:mga0k408_1_c1 3300050493 Bacteria 1089059
198 nmdc:mga0k408_24_c1 3300050493 Bacteria 14971
199 nmdc:mga06z11_44_c1 3300050494 Bacteria 47967
200 nmdc:mga04h51_3969_c1 3300050495 Bacteria 3641
201 nmdc:mga07m45_10829_c2 3300050496 Bacteria 3714
202 nmdc:mga07m45_31155_c1 3300050496 Bacteria 2954
203 nmdc:mga08y16_1132_c1 3300050511 Bacteria 26248
204 nmdc:mga0sz30_1_c1 3300050516 Bacteria 796501
205 nmdc:mga0sz30_23_c1 3300050516 Bacteria 65683
206 Ga0500610_0000001 3300053079 Bacteria 185468
207 Ga0500643_000011 3300053087 Bacteria 385630
208 Ga0500643_000038 3300053087 Bacteria 178974
209 Ga0500644_0000006 3300053088 Bacteria 143304
210 Ga0500644_0003266 3300053088 Bacteria 4008
211 Ga0500583_0000052 3300053092 Bacteria 75622
212 Ga0500583_0040960 3300053092 Bacteria 2101
213 Ga0500651_0000045 3300053093 Bacteria 85481
214 Ga0500651_0002837 3300053093 Bacteria 9309
215 Ga0500566_0000001 3300053094 Bacteria 1101031
216 Ga0500650_0000001 3300053098 Bacteria 818797
217 Ga0500555_000001 3300053103 Bacteria 1353713
218 Ga0500555_000002 3300053103 Bacteria 1314346
219 Ga0500555_017705 3300053103 Bacteria 2053
220 Ga0500556_0000295 3300053104 Bacteria 38375
221 Ga0500562_000002 3300053108 Bacteria 977234
222 Ga0500593_000001 3300053117 Bacteria 784404
223 Ga0500594_0000001 3300053118 Bacteria 1178472
224 Ga0500614_000001 3300053123 Bacteria 1274484
225 Ga0500614_000941 3300053123 Bacteria 7258
226 Ga0500628_000012 3300053129 Bacteria 106556
227 Ga0500642_0006274 3300053130 Bacteria 3899
228 Ga0500655_000535 3300053133 Bacteria 7633
229 Ga0500568_0013108 3300053139 Unclassified 3790
230 Ga0500577_0001409 3300053142 Bacteria 6163
231 Ga0500577_0001567 3300053142 Bacteria 5844
232 Ga0500579_094773 3300053143 Bacteria 1590
233 Ga0500589_000016 3300053147 Bacteria 107090
234 Ga0500604_0019246 3300053151 Unclassified 1910
235 Ga0500649_000013 3300053722 Bacteria 73694
236 Ga0500570_000005 3300053724 Bacteria 132994
237 Ga0500611_000751 3300053727 Bacteria 3345
238 Ga0500611_001457 3300053727 Bacteria 2603
239 Ga0070659_100012988
240 JGI24741J21665_1001251
241 JGI24740J21852_10011248
242 JGI24737J22298_10000228
243 JGI24735J21928_10001889
244 rootH2_10153880
245 rootL2_10123251
246 rootH1_10079468
247 Ga0070658_10000012
248 Ga0070658_10000015
249 Ga0070658_10001231
250 Ga0070658_10002596
251 Ga0070658_10103446
252 Ga0070676_10073876
253 Ga0070683_100000261
254 Ga0070670_100082968
255 Ga0070680_100062760
256 Ga0068868_100130831
257 Ga0070660_100001769
258 Ga0070660_100002681
259 Ga0070691_10017911
260 Ga0070671_100032065
261 Ga0070674_100001231
262 Ga0070673_100001360
263 Ga0070667_100000001
264 Ga0070667_100003189
265 Ga0070678_100000234
266 Ga0070681_10342842
267 Ga0070685_10014676
268 Ga0070679_100001645
269 Ga0070679_100002235
270 Ga0070679_100029823
271 Ga0070679_100030169
272 Ga0070684_100001437
273 Ga0070684_100091498
274 Ga0068853_100134782
275 Ga0070672_100111729
276 Ga0070665_100060387
277 Ga0068855_100000003
278 Ga0068855_100001675
279 Ga0068855_100003159
280 Ga0068855_100110927
281 Ga0068857_100000002
282 Ga0068857_100019578
283 Ga0068856_100000001
284 Ga0068863_100086716
285 Ga0068863_100107051
286 Ga0068858_100338939
287 Ga0068860_100082626
288 Ga0068862_100054727
289 Ga0081455_10000003
290 Ga0075365_10000220
291 Ga0075368_10009711
292 Ga0075362_10000303
293 Ga0075367_10000088
294 Ga0075369_10000005
295 Ga0075369_10000056
296 Ga0075366_10000001
297 Ga0075366_10000171
298 Ga0075366_10001401
299 Ga0075370_10018345
300 Ga0075428_100019385
301 Ga0075430_100009366
302 Ga0105240_10305411
303 Ga0111539_10001909
304 Ga0105245_10000001
305 Ga0105245_10001190
306 Ga0105245_10012971
307 Ga0105245_10048846
308 Ga0105245_10069900
309 Ga0105243_10000001
310 Ga0105243_10061400
311 Ga0105241_10002073
312 Ga0105242_10000135
313 Ga0105242_10004190
314 Ga0105248_10339258
315 Ga0105237_10007202
316 Ga0105238_10005116
317 Ga0105238_10088656
318 Ga0105249_10101711
319 Ga0105028_100378
320 Ga0105239_10012130
321 Ga0157373_10000042
322 Ga0157371_10005566
323 Ga0157369_10003103
324 Ga0157369_10049375
325 Ga0157374_10000195
326 Ga0157374_10002313
327 Ga0157374_10012719
328 Ga0157374_10179941
329 Ga0157374_10303459
330 Ga0157378_10029270
331 Ga0157372_10000187
332 Ga0157372_10039660
333 Ga0163163_10011629
334 Ga0163163_10180432
335 Ga0163163_10312418
336 Ga0157377_10006548
337 Ga0157377_10059288
338 Ga0207647_10000506
339 Ga0207645_10096669
340 Ga0207705_10000011
341 Ga0207705_10000056
342 Ga0207705_10001580
343 Ga0207705_10001854
344 Ga0207705_10005754
345 Ga0207654_10000002
346 Ga0207707_10010955
347 Ga0207707_10165140
348 Ga0207707_10190552
349 Ga0207695_10000005
350 Ga0207695_10206540
351 Ga0207671_10070202
352 Ga0207660_10001351
353 Ga0207660_10054219
354 Ga0207660_10107388
355 Ga0207657_10004283
356 Ga0207657_10024353
357 Ga0207652_10001980
358 Ga0207652_10005637
359 Ga0207652_10060592
360 Ga0207652_10186028
361 Ga0207694_10188015
362 Ga0207650_10063458
363 Ga0207687_10000030
364 Ga0207687_10001069
365 Ga0207687_10011710
366 Ga0207644_10000001
367 Ga0207644_10021900
368 Ga0207690_10008357
369 Ga0207686_10000001
370 Ga0207709_10000002
371 Ga0207661_10000021
372 Ga0207661_10020443
373 Ga0207667_10000008
374 Ga0207667_10000466
375 Ga0207667_10012679
376 Ga0207651_10000191
377 Ga0207658_10000003
378 Ga0207702_10000001
379 Ga0207641_10063004
380 Ga0207641_10152899
381 Ga0207674_10000001
382 Ga0207674_10063436
383 Ga0207683_10007035
384 Ga0209813_10003594
385 Ga0207428_10006981
386 Ga0268266_10001545
387 Ga0268264_10087991
388 Ga0265337_1008558
389 Ga0265319_1011237
390 Ga0265338_10000052
391 Ga0265331_10066138
392 Ga0265327_10004018
393 Ga0265327_10061477
394 Ga0395899_0012358
395 Ga0395899_0026329
396 Ga0395900_0000232
397 Ga0395900_0004371
398 Ga0395900_0088061
399 Ga0395900_0109937
400 Ga0395898_0003425
401 Ga0395898_0021849
402 Ga0395905_0000238
403 Ga0395905_0068708
404 Ga0395901_0018084
405 Ga0395901_0024989
406 Ga0395901_0060568
407 Ga0495629_0012226
408 Ga0495583_0032781
409 Ga0495622_0000082
410 Ga0495658_0001953
411 Ga0495600_0003845
412 Ga0495602_0147727
413 Ga0496112_0077681
414 Ga0496125_0144047
415 Ga0496126_0018475
416 Ga0501031_0000446
417 Ga0501032_0003078
418 Ga0501034_0010909
419 Ga0501036_0011927
420 Ga0501037_0001628
421 Ga0501046_0000922
422 Ga0501047_0000229
423 Ga0501047_0010162
424 Ga0501048_0014923
425 Ga0501070_0153495
426 Ga0501080_0008524
427 Ga0501035_0000033
428 Ga0501035_0011441
429 nmdc:mga03683_20_c2
430 nmdc:mga0yw44_2_c1
431 nmdc:mga0yw44_885_c1
432 nmdc:mga0k408_1061_c1
433 nmdc:mga0k408_1687_c1
434 nmdc:mga0k408_17_c2
435 nmdc:mga0k408_1_c1
436 nmdc:mga0k408_24_c1
437 nmdc:mga06z11_44_c1
438 nmdc:mga04h51_3969_c1
439 nmdc:mga07m45_10829_c2
440 nmdc:mga07m45_31155_c1
441 nmdc:mga08y16_1132_c1
442 nmdc:mga0sz30_1_c1
443 nmdc:mga0sz30_23_c1
444 Ga0500610_0000001
445 Ga0500643_000011
446 Ga0500643_000038
447 Ga0500644_0000006
448 Ga0500644_0003266
449 Ga0500583_0000052
450 Ga0500583_0040960
451 Ga0500651_0000045
452 Ga0500651_0002837
453 Ga0500566_0000001
454 Ga0500650_0000001
455 Ga0500555_000001
456 Ga0500555_000002
457 Ga0500555_017705
458 Ga0500556_0000295
459 Ga0500562_000002
460 Ga0500593_000001
461 Ga0500594_0000001
462 Ga0500614_000001
463 Ga0500614_000941
464 Ga0500628_000012
465 Ga0500642_0006274
466 Ga0500655_000535
467 Ga0500568_0013108
468 Ga0500577_0001409
469 Ga0500577_0001567
470 Ga0500579_094773
471 Ga0500589_000016
472 Ga0500604_0019246
473 Ga0500649_000013
474 Ga0500570_000005
475 Ga0500611_000751
476 Ga0500611_001457

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13184

KH_5

NusA-like KH domain

297

366

0.96

PF08529

NusA_N

NusA N-terminal domain

71

192

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5lm9-assembly1.cif.gz_A structure of e. coli nusa 0.8998 116 347
2atw-assembly1.cif.gz_A structure of a mycobacterium tuberculosis nusa-rna complex 0.8992 140 348
4qiw-assembly2.cif.gz_Q crystal structure of euryarchaeal rna polymerase from thermococcus kodakarensis 0.8516 140 204
1y14-assembly3.cif.gz_D crystal structure of yeast subcomplex of rpb4 and rpb7 0.8507 140 207
3ayh-assembly1.cif.gz_B crystal structure of the c17/25 subcomplex from s. pombe rna polymerase iii 0.849 140 203
ID Description Score Start End Superfamily
af_P0AFF6_278_343_3.30.300.20 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.9939 284 347 3.30.300.20
af_P9WIV3_183_261_3.30.300.20 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.9756 205 283 3.30.300.20
2atwA03 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.9638 284 348 3.30.300.20
af_Q2G2D2_129_198_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9572 135 203 2.40.50.140
af_P9WIV3_183_261_3.30.300.20 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.9516 205 283 3.30.300.20
ID Description Score Start End GO Terms
AF-A0A3C0J1I9-F1-model_v4 Transcription termination/antitermination protein NusA 0.9968 290 347 GO:0003723
GO:0005829
GO:0006353
GO:0031564
AF-A0A3C0MHD0-F1-model_v4 Transcription termination/antitermination protein NusA 0.9915 282 347 GO:0003723
GO:0005829
GO:0006353
GO:0031564
AF-A0A2E3ZKI8-F1-model_v4 Transcription termination/antitermination protein NusA 0.991 275 347 GO:0000166
GO:0003723
GO:0005829
GO:0006353
GO:0031564
AF-A0A838Q7I8-F1-model_v4 Transcription termination/antitermination protein NusA 0.9899 205 347 GO:0000166
GO:0003723
GO:0005829
GO:0006353
GO:0031564
AF-A0A2B4PFP8-F1-model_v4 Transcription termination/antitermination protein NusA 0.9883 265 347 GO:0000166
GO:0003723
GO:0005829
GO:0006353
GO:0031564

Map