F350648
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 238 | 173 | 476 | 303 |
Family's Representative Sequence
| Representative Sequence | 3300005338|Ga0068868_100026539|Ga0068868_1000265393 |
| Length | 334 |
| Sequence | MCMPPAPDRVQARSTTSGQTRETSIPEARVPSSFKPKRVVVAINPSASFGATRAVGPAVVQTLRAMGHDVTSLQEPDYESLLSTARAAVKTKPDAFVVVGGDGMVNLGTNLVAGTKVPLGIVPSGTGNDMARSLGLPFDNTEAAVVALGEALQHPARIIDAARITYTDDEGEAAERWFACALSAGFDATVNERANLMHHPKGPSRYIIALGIELAKLKPYHYTLTLDGVEQTVDANMVSIGNGMKITPDALLDDGLLDVMIVRPLSRINFVRIFPSVFKGEHVKHPKVSIVRAKDVRIAGEGVVVYGDGERVGRAPVDVKLVPGALRVLAPHPA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 2 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 3 | 3300003752 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 | Metagenome | Endosphere |
| 4 | 3300003760 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 | Metagenome | Endosphere |
| 5 | 3300003762 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 | Metagenome | Endosphere |
| 6 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 7 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 14 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 18 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 19 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 20 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 21 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 22 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 23 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 24 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 25 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 26 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 27 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 28 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 29 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 30 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 31 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300013250 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 | Metagenome | Rhizosphere |
| 45 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300025228 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 52 | 3300025229 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 53 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 54 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 55 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 56 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 80 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 81 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 82 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 83 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 84 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 85 | 3300041413 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 | Metagenome | Rhizosphere |
| 86 | 3300041494 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG | Metagenome | Unclassified |
| 87 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 88 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 89 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 90 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 97 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 98 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 99 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 100 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 101 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 102 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 103 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 104 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 105 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 106 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 107 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 108 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 109 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 110 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 111 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 112 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 113 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 114 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 115 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 116 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 117 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 122 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 123 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 125 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 126 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 127 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 128 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 129 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 130 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 131 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 132 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 133 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 134 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 135 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 136 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 137 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 138 | 3300053098 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere | Metagenome | Endosphere |
| 139 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 140 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 141 | 3300053117 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere | Metagenome | Endosphere |
| 142 | 3300053133 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere | Metagenome | Endosphere |
| 143 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 144 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 145 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 146 | 3300053142 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere | Metagenome | Endosphere |
| 147 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 148 | 3300053155 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere | Metagenome | Endosphere |
| 149 | 2515154155 | Actinopolymorpha alba DSM 45243 | Isolate | Rhizosphere |
| 150 | 2643221542 | Microbacterium sp. Root1433D1 | Isolate | Unclassified |
| 151 | 2643221566 | Microbacterium sp. Root166 | Isolate | Unclassified |
| 152 | 2643221575 | Microbacterium sp. Root61 | Isolate | Unclassified |
| 153 | 2643221597 | Microbacterium sp. Root180 | Isolate | Unclassified |
| 154 | 2643221630 | Microbacterium sp. Root322 | Isolate | Unclassified |
| 155 | 2643221724 | Microbacterium sp. Root280D1 | Isolate | Unclassified |
| 156 | 2675903058 | Actinopolymorpha cephalotaxi CPCC 202808 | Isolate | Rhizosphere |
| 157 | 2675903059 | Asanoa hainanensis CGMCC 4.5593 | Isolate | Rhizosphere |
| 158 | 2728369380 | Microbacterium sp. 1.5R | Isolate | Rhizosphere |
| 159 | 2773857763 | Microbacterium sp. SAI-030 | Isolate | Unclassified |
| 160 | 2808606306 | Microbacterium sp. SLBN-146 | Isolate | Unclassified |
| 161 | 2811994872 | Microbacterium sp. MU4Y-5-1 | Isolate | Unclassified |
| 162 | 2821268502 | Microbacterium sp. YT0620BN | Isolate | Unclassified |
| 163 | 2827628540 | Actinopolymorpha cephalotaxi DSM 45117 | Isolate | Rhizosphere |
| 164 | 2852643534 | Leifsonia sp. AK011 | Isolate | Rhizosphere |
| 165 | 2857737099 | Lysinimonas sp. R-73066 | Isolate | Unclassified |
| 166 | 2862993130 | Planctomonas deserti 13S1-3 v2 | Isolate | Rhizosphere |
| 167 | 2870622029 | Conyzicola lurida DSM 105784 | Isolate | Unclassified |
| 168 | 2939657138 | Conyzicola nivalis 2857 | Isolate | Rhizosphere |
| 169 | 2964326757 | Planctomonas psychrotolerans J5903 | Isolate | Rhizosphere |
| 170 | 2984576629 | Nocardioides zeae SORGH_AS913 | Isolate | Aerial Root |
| 171 | 2990256926 | Nocardioides zeae SORGH_AS885 | Isolate | Aerial Root |
| 172 | 8004182704 | Microbacterium paraoxydans ku-mp | Isolate | Unclassified |
| 173 | 8045830549 | Microbacterium yannicii DSM 23203 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 89.08 |
| Metatranscriptomes | 0.42 |
| Isolates | 10.5 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0.84 |
| Bulb | 0 |
| Endosphere | 16.39 |
| Nodule | 0 |
| Rhizoplane | 8.4 |
| Rhizosphere | 59.66 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0068868_100026539 | 3300005338 | Bacteria | 4416 |
| 2 | Ga0006562J51391_1018999 | 3300003578 | Bacteria | 4554 |
| 3 | Ga0055539_1000111 | 3300003752 | Bacteria | 90530 |
| 4 | Ga0055527_1000012 | 3300003760 | Bacteria | 348744 |
| 5 | Ga0055542_1000017 | 3300003762 | Bacteria | 348744 |
| 6 | Ga0055529_1000023 | 3300003763 | Bacteria | 314383 |
| 7 | Ga0070658_10000245 | 3300005327 | Bacteria | 48267 |
| 8 | Ga0070658_10041574 | 3300005327 | Bacteria | 3709 |
| 9 | Ga0070661_100344872 | 3300005344 | Bacteria | 1167 |
| 10 | Ga0070659_100002739 | 3300005366 | Bacteria | 12541 |
| 11 | Ga0070667_100126287 | 3300005367 | Bacteria | 2229 |
| 12 | Ga0070708_100001612 | 3300005445 | Bacteria | 17296 |
| 13 | Ga0070663_100341397 | 3300005455 | Bacteria | 1210 |
| 14 | Ga0070706_100265494 | 3300005467 | Bacteria | 1602 |
| 15 | Ga0070706_100293541 | 3300005467 | Bacteria | 1517 |
| 16 | Ga0070707_100037443 | 3300005468 | Bacteria | 4629 |
| 17 | Ga0070707_100101358 | 3300005468 | Bacteria | 2790 |
| 18 | Ga0070672_100029731 | 3300005543 | Bacteria | 4100 |
| 19 | Ga0070665_100030747 | 3300005548 | Bacteria | 5403 |
| 20 | Ga0068855_100001488 | 3300005563 | Bacteria | 29320 |
| 21 | Ga0068855_100177860 | 3300005563 | Bacteria | 2406 |
| 22 | Ga0068855_100366551 | 3300005563 | Bacteria | 1584 |
| 23 | Ga0068855_100409939 | 3300005563 | Bacteria | 1484 |
| 24 | Ga0068857_100000197 | 3300005577 | Bacteria | 39064 |
| 25 | Ga0068857_100246888 | 3300005577 | Bacteria | 1635 |
| 26 | Ga0068856_100160372 | 3300005614 | Bacteria | 2259 |
| 27 | Ga0068852_100000888 | 3300005616 | Bacteria | 19802 |
| 28 | Ga0068852_100002042 | 3300005616 | Bacteria | 13753 |
| 29 | Ga0068859_100031604 | 3300005617 | Bacteria | 5317 |
| 30 | Ga0068851_10000001 | 3300005834 | Bacteria | 495512 |
| 31 | Ga0068858_100001056 | 3300005842 | Bacteria | 28477 |
| 32 | Ga0081455_10179872 | 3300005937 | Bacteria | 1602 |
| 33 | Ga0075365_10032094 | 3300006038 | Bacteria | 3373 |
| 34 | Ga0075365_10069358 | 3300006038 | Bacteria | 2369 |
| 35 | Ga0075364_10008218 | 3300006051 | Bacteria | 6230 |
| 36 | Ga0075370_10021987 | 3300006353 | Bacteria | 3497 |
| 37 | Ga0075428_100000772 | 3300006844 | Bacteria | 33314 |
| 38 | Ga0075430_100045860 | 3300006846 | Bacteria | 3692 |
| 39 | Ga0075431_100005188 | 3300006847 | Bacteria | 12829 |
| 40 | Ga0097620_100031604 | 3300006931 | Bacteria | 5317 |
| 41 | Ga0105240_10004917 | 3300009093 | Bacteria | 20090 |
| 42 | Ga0105240_10180153 | 3300009093 | Bacteria | 2494 |
| 43 | Ga0105245_10007206 | 3300009098 | Bacteria | 9745 |
| 44 | Ga0105245_10095568 | 3300009098 | Bacteria | 2741 |
| 45 | Ga0105247_10228698 | 3300009101 | Bacteria | 1262 |
| 46 | Ga0105241_10032398 | 3300009174 | Bacteria | 3918 |
| 47 | Ga0105241_10118649 | 3300009174 | Bacteria | 2127 |
| 48 | Ga0105248_10002215 | 3300009177 | Bacteria | 21501 |
| 49 | Ga0105248_10018919 | 3300009177 | Bacteria | 7616 |
| 50 | Ga0105237_10000341 | 3300009545 | Bacteria | 65672 |
| 51 | Ga0105237_10016321 | 3300009545 | Bacteria | 7719 |
| 52 | Ga0105237_10192023 | 3300009545 | Bacteria | 2042 |
| 53 | Ga0105238_10007549 | 3300009551 | Bacteria | 10891 |
| 54 | Ga0105238_10024235 | 3300009551 | Bacteria | 6185 |
| 55 | Ga0105239_10239257 | 3300010375 | Bacteria | 2037 |
| 56 | Ga0105246_10125400 | 3300011119 | Bacteria | 1910 |
| 57 | Ga0157371_10001286 | 3300013102 | Bacteria | 26451 |
| 58 | Ga0157370_10007734 | 3300013104 | Bacteria | 11654 |
| 59 | Ga0157369_10010340 | 3300013105 | Bacteria | 10641 |
| 60 | Ga0171462_1001 | 3300013250 | Bacteria | 1135406 |
| 61 | Ga0163162_10317115 | 3300013306 | Bacteria | 1691 |
| 62 | Ga0157372_10027817 | 3300013307 | Bacteria | 6162 |
| 63 | Ga0163163_10054750 | 3300014325 | Bacteria | 3942 |
| 64 | Ga0157379_10033738 | 3300014968 | Bacteria | 4565 |
| 65 | Ga0157376_10561497 | 3300014969 | Bacteria | 1131 |
| 66 | Ga0163161_10202863 | 3300017792 | Bacteria | 1529 |
| 67 | Ga0209672_100003 | 3300025228 | Bacteria | 1560476 |
| 68 | Ga0209147_100633 | 3300025229 | Bacteria | 18857 |
| 69 | Ga0209646_1000167 | 3300025246 | Bacteria | 87036 |
| 70 | Ga0209148_1000004 | 3300025254 | Bacteria | 1844481 |
| 71 | Ga0209148_1000608 | 3300025254 | Bacteria | 32066 |
| 72 | Ga0209148_1001580 | 3300025254 | Bacteria | 10786 |
| 73 | Ga0209148_1020189 | 3300025254 | Bacteria | 1098 |
| 74 | Ga0209455_1000022 | 3300025272 | Bacteria | 688910 |
| 75 | Ga0209455_1000843 | 3300025272 | Bacteria | 16432 |
| 76 | Ga0207656_10000002 | 3300025321 | Bacteria | 792178 |
| 77 | Ga0207710_10086958 | 3300025900 | Bacteria | 1457 |
| 78 | Ga0207705_10000001 | 3300025909 | Bacteria | 2061880 |
| 79 | Ga0207684_10246652 | 3300025910 | Bacteria | 1541 |
| 80 | Ga0207684_10396257 | 3300025910 | Bacteria | 1187 |
| 81 | Ga0207654_10000001 | 3300025911 | Bacteria | 1816198 |
| 82 | Ga0207695_10028108 | 3300025913 | Bacteria | 6244 |
| 83 | Ga0207695_10351731 | 3300025913 | Bacteria | 1360 |
| 84 | Ga0207671_10000002 | 3300025914 | Bacteria | 1144816 |
| 85 | Ga0207671_10066807 | 3300025914 | Bacteria | 2677 |
| 86 | Ga0207657_10030315 | 3300025919 | Bacteria | 4910 |
| 87 | Ga0207646_10085495 | 3300025922 | Bacteria | 2822 |
| 88 | Ga0207694_10004015 | 3300025924 | Bacteria | 11592 |
| 89 | Ga0207687_10025899 | 3300025927 | Bacteria | 3926 |
| 90 | Ga0207687_10043998 | 3300025927 | Bacteria | 3078 |
| 91 | Ga0207690_10001529 | 3300025932 | Bacteria | 14468 |
| 92 | Ga0207711_10001372 | 3300025941 | Bacteria | 22943 |
| 93 | Ga0207711_10013129 | 3300025941 | Bacteria | 6878 |
| 94 | Ga0207667_10000844 | 3300025949 | Bacteria | 39488 |
| 95 | Ga0207667_10001333 | 3300025949 | Bacteria | 30965 |
| 96 | Ga0207667_10136072 | 3300025949 | Bacteria | 2530 |
| 97 | Ga0207667_10338346 | 3300025949 | Bacteria | 1536 |
| 98 | Ga0207658_10072527 | 3300025986 | Bacteria | 2610 |
| 99 | Ga0207677_10102710 | 3300026023 | Bacteria | 2108 |
| 100 | Ga0207703_10000168 | 3300026035 | Bacteria | 76234 |
| 101 | Ga0207702_10027650 | 3300026078 | Bacteria | 4710 |
| 102 | Ga0207702_10064477 | 3300026078 | Bacteria | 3135 |
| 103 | Ga0207641_10034346 | 3300026088 | Bacteria | 4218 |
| 104 | Ga0207674_10027876 | 3300026116 | Bacteria | 5967 |
| 105 | Ga0207683_10473293 | 3300026121 | Bacteria | 1156 |
| 106 | Ga0207698_10000183 | 3300026142 | Bacteria | 38581 |
| 107 | Ga0207698_10000563 | 3300026142 | Bacteria | 21585 |
| 108 | Ga0268266_10183050 | 3300028379 | Bacteria | 1909 |
| 109 | Ga0307515_10134981 | 3300028794 | Bacteria | 2690 |
| 110 | Ga0307514_10020818 | 3300031649 | Bacteria | 5349 |
| 111 | Ga0307406_10000025 | 3300031901 | Bacteria | 92128 |
| 112 | Ga0307406_10000973 | 3300031901 | Bacteria | 16000 |
| 113 | Ga0307406_10140410 | 3300031901 | Bacteria | 1709 |
| 114 | Ga0307412_10065503 | 3300031911 | Bacteria | 2459 |
| 115 | Ga0395900_0002216 | 3300037418 | Bacteria | 21707 |
| 116 | Ga0395898_0001754 | 3300037466 | Bacteria | 28472 |
| 117 | Ga0439465_0062780 | 3300041413 | Bacteria | 1233 |
| 118 | Ga0451837_1786111 | 3300041494 | Bacteria | 1581 |
| 119 | Ga0466965_0000020 | 3300044683 | Bacteria | 63210 |
| 120 | Ga0466965_0147085 | 3300044683 | Bacteria | 1230 |
| 121 | Ga0466961_0108732 | 3300044693 | Bacteria | 1745 |
| 122 | Ga0466970_0158207 | 3300044765 | Bacteria | 1252 |
| 123 | Ga0495627_000753 | 3300046453 | Bacteria | 24115 |
| 124 | Ga0495590_0000308 | 3300046457 | Bacteria | 25645 |
| 125 | Ga0495650_0029361 | 3300046471 | Bacteria | 2507 |
| 126 | Ga0495620_0017780 | 3300046515 | Bacteria | 3536 |
| 127 | Ga0495643_0086562 | 3300046522 | Bacteria | 1623 |
| 128 | Ga0495672_0008614 | 3300047320 | Bacteria | 7505 |
| 129 | Ga0496100_0008510 | 3300048903 | Bacteria | 5723 |
| 130 | Ga0496101_0019158 | 3300048904 | Bacteria | 4666 |
| 131 | Ga0496101_0100546 | 3300048904 | Bacteria | 2163 |
| 132 | Ga0496102_0036786 | 3300048905 | Bacteria | 4412 |
| 133 | Ga0496102_0143845 | 3300048905 | Bacteria | 2237 |
| 134 | Ga0496103_0011066 | 3300048906 | Bacteria | 5342 |
| 135 | Ga0496103_0156056 | 3300048906 | Bacteria | 1463 |
| 136 | Ga0496104_0337281 | 3300048907 | Bacteria | 1420 |
| 137 | Ga0496105_0025470 | 3300048908 | Bacteria | 4815 |
| 138 | Ga0496107_0014419 | 3300048910 | Bacteria | 5534 |
| 139 | Ga0496108_0025200 | 3300048911 | Bacteria | 4901 |
| 140 | Ga0496108_0514675 | 3300048911 | Bacteria | 1045 |
| 141 | Ga0496110_0093540 | 3300048913 | Bacteria | 2691 |
| 142 | Ga0496111_0029180 | 3300048914 | Bacteria | 3916 |
| 143 | Ga0496113_0078449 | 3300048916 | Bacteria | 2526 |
| 144 | Ga0496114_0023595 | 3300048917 | Bacteria | 5021 |
| 145 | Ga0496114_0037312 | 3300048917 | Bacteria | 4018 |
| 146 | Ga0496114_0065410 | 3300048917 | Bacteria | 3046 |
| 147 | Ga0496115_0166042 | 3300048918 | Bacteria | 1825 |
| 148 | Ga0496115_0236674 | 3300048918 | Bacteria | 1505 |
| 149 | Ga0496116_0068674 | 3300048919 | Bacteria | 2257 |
| 150 | Ga0496119_0001566 | 3300048922 | Bacteria | 27219 |
| 151 | Ga0496119_0001666 | 3300048922 | Bacteria | 25976 |
| 152 | Ga0496119_0003156 | 3300048922 | Bacteria | 17319 |
| 153 | Ga0496119_0052968 | 3300048922 | Bacteria | 2482 |
| 154 | Ga0496119_0145373 | 3300048922 | Bacteria | 1276 |
| 155 | Ga0496120_0000890 | 3300048923 | Bacteria | 42014 |
| 156 | Ga0496120_0021043 | 3300048923 | Bacteria | 4127 |
| 157 | Ga0496120_0079738 | 3300048923 | Bacteria | 1776 |
| 158 | Ga0496120_0209438 | 3300048923 | Bacteria | 938 |
| 159 | Ga0496121_0000025 | 3300048924 | Bacteria | 453467 |
| 160 | Ga0496121_0038018 | 3300048924 | Bacteria | 4269 |
| 161 | Ga0496122_0001019 | 3300048925 | Bacteria | 49576 |
| 162 | Ga0496123_0001633 | 3300048926 | Bacteria | 30225 |
| 163 | Ga0496125_0000120 | 3300048928 | Bacteria | 175991 |
| 164 | Ga0496126_0018316 | 3300048929 | Bacteria | 6945 |
| 165 | Ga0501031_0231084 | 3300049568 | Bacteria | 1203 |
| 166 | Ga0501032_0032789 | 3300049569 | Bacteria | 3559 |
| 167 | Ga0501032_0043458 | 3300049569 | Bacteria | 3043 |
| 168 | Ga0501033_0025222 | 3300049570 | Bacteria | 4479 |
| 169 | Ga0501034_0002427 | 3300049571 | Bacteria | 22541 |
| 170 | Ga0501034_0174627 | 3300049571 | Bacteria | 2115 |
| 171 | Ga0501034_0240858 | 3300049571 | Bacteria | 1755 |
| 172 | Ga0501036_0296516 | 3300049572 | Bacteria | 1352 |
| 173 | Ga0501037_0240718 | 3300049573 | Bacteria | 1268 |
| 174 | Ga0501038_0006032 | 3300049574 | Bacteria | 11217 |
| 175 | Ga0501038_0240717 | 3300049574 | Bacteria | 1437 |
| 176 | Ga0501038_0272935 | 3300049574 | Bacteria | 1333 |
| 177 | Ga0501039_0068299 | 3300049575 | Bacteria | 2760 |
| 178 | Ga0501043_0013331 | 3300049579 | Bacteria | 6428 |
| 179 | Ga0501043_0266076 | 3300049579 | Bacteria | 1317 |
| 180 | Ga0501047_0001282 | 3300049581 | Bacteria | 24835 |
| 181 | Ga0501067_0233731 | 3300049583 | Bacteria | 1023 |
| 182 | Ga0501070_0000133 | 3300049586 | Bacteria | 67036 |
| 183 | Ga0501070_0000610 | 3300049586 | Bacteria | 32781 |
| 184 | Ga0501070_0165115 | 3300049586 | Bacteria | 1825 |
| 185 | Ga0501070_0311172 | 3300049586 | Bacteria | 1282 |
| 186 | Ga0501070_0321538 | 3300049586 | Bacteria | 1258 |
| 187 | Ga0501073_0000028 | 3300049589 | Bacteria | 118187 |
| 188 | Ga0501035_0013019 | 3300049822 | Bacteria | 7676 |
| 189 | Ga0501044_0022882 | 3300049823 | Bacteria | 6655 |
| 190 | nmdc:mga00v17_38343_c1 | 3300050491 | Bacteria | 2865 |
| 191 | nmdc:mga0yw44_56231_c1 | 3300050492 | Bacteria | 2396 |
| 192 | nmdc:mga0yw44_89168_c1 | 3300050492 | Bacteria | 1946 |
| 193 | nmdc:mga06z11_33789_c1 | 3300050494 | Bacteria | 2505 |
| 194 | nmdc:mga06r32_6720_c1 | 3300050510 | Bacteria | 9254 |
| 195 | nmdc:mga0sz30_39588_c1 | 3300050516 | Bacteria | 1978 |
| 196 | Ga0500651_0000442 | 3300053093 | Bacteria | 22152 |
| 197 | Ga0500650_0003169 | 3300053098 | Bacteria | 5647 |
| 198 | Ga0500556_0000064 | 3300053104 | Bacteria | 109213 |
| 199 | Ga0500562_004616 | 3300053108 | Bacteria | 3479 |
| 200 | Ga0500593_000759 | 3300053117 | Bacteria | 12108 |
| 201 | Ga0500655_011668 | 3300053133 | Bacteria | 1594 |
| 202 | Ga0500559_0000968 | 3300053136 | Bacteria | 17981 |
| 203 | Ga0500568_0000281 | 3300053139 | Bacteria | 42246 |
| 204 | Ga0500568_0012314 | 3300053139 | Bacteria | 3939 |
| 205 | Ga0500573_0002041 | 3300053140 | Bacteria | 9912 |
| 206 | Ga0500573_0003015 | 3300053140 | Bacteria | 8615 |
| 207 | Ga0500573_0050139 | 3300053140 | Bacteria | 2401 |
| 208 | Ga0500573_0081047 | 3300053140 | Bacteria | 1844 |
| 209 | Ga0500573_0094889 | 3300053140 | Bacteria | 1682 |
| 210 | Ga0500573_0147784 | 3300053140 | Bacteria | 1289 |
| 211 | Ga0500577_0070504 | 3300053142 | Bacteria | 1370 |
| 212 | Ga0500616_0000205 | 3300053153 | Bacteria | 96713 |
| 213 | Ga0500620_000025 | 3300053155 | Bacteria | 30660 |
| 214 | 2515851253 | 2515154155 | Bacteria | 7985436 |
| 215 | 2643733615 | 2643221542 | Bacteria | 3563959 |
| 216 | 2643849377 | 2643221566 | Bacteria | 3460379 |
| 217 | 2643888534 | 2643221575 | Bacteria | 4022601 |
| 218 | 2643996439 | 2643221597 | Bacteria | 3347721 |
| 219 | 2644170190 | 2643221630 | Bacteria | 3601215 |
| 220 | 2644680233 | 2643221724 | Bacteria | 3593515 |
| 221 | 2676475757 | 2675903058 | Bacteria | 6822861 |
| 222 | 2676485556 | 2675903059 | Bacteria | 8644972 |
| 223 | 2730229684 | 2728369380 | Bacteria | 3620317 |
| 224 | 2774400244 | 2773857763 | Bacteria | 4180068 |
| 225 | 2808631769 | 2808606306 | Bacteria | 3608896 |
| 226 | 2812322449 | 2811994872 | Bacteria | 4121241 |
| 227 | 2821269369 | 2821268502 | Bacteria | 3750023 |
| 228 | 2827630318 | 2827628540 | Bacteria | 6858585 |
| 229 | 2852646084 | 2852643534 | Bacteria | 3013378 |
| 230 | 2857738912 | 2857737099 | Bacteria | 3104305 |
| 231 | 2862994988 | 2862993130 | Bacteria | 3860849 |
| 232 | 2870624360 | 2870622029 | Bacteria | 3643329 |
| 233 | 2939658853 | 2939657138 | Bacteria | 3740283 |
| 234 | 2964327248 | 2964326757 | Bacteria | 3290868 |
| 235 | 2984580115 | 2984576629 | Bacteria | 4248407 |
| 236 | 2990258966 | 2990256926 | Bacteria | 4252839 |
| 237 | 8004185117 | 8004182704 | Bacteria | 3391155 |
| 238 | 8045832715 | 8045830549 | Bacteria | 4444727 |
| 239 | Ga0068868_100026539 | |||
| 240 | Ga0006562J51391_1018999 | |||
| 241 | Ga0055539_1000111 | |||
| 242 | Ga0055527_1000012 | |||
| 243 | Ga0055542_1000017 | |||
| 244 | Ga0055529_1000023 | |||
| 245 | Ga0070658_10000245 | |||
| 246 | Ga0070658_10041574 | |||
| 247 | Ga0070661_100344872 | |||
| 248 | Ga0070659_100002739 | |||
| 249 | Ga0070667_100126287 | |||
| 250 | Ga0070708_100001612 | |||
| 251 | Ga0070663_100341397 | |||
| 252 | Ga0070706_100265494 | |||
| 253 | Ga0070706_100293541 | |||
| 254 | Ga0070707_100037443 | |||
| 255 | Ga0070707_100101358 | |||
| 256 | Ga0070672_100029731 | |||
| 257 | Ga0070665_100030747 | |||
| 258 | Ga0068855_100001488 | |||
| 259 | Ga0068855_100177860 | |||
| 260 | Ga0068855_100366551 | |||
| 261 | Ga0068855_100409939 | |||
| 262 | Ga0068857_100000197 | |||
| 263 | Ga0068857_100246888 | |||
| 264 | Ga0068856_100160372 | |||
| 265 | Ga0068852_100000888 | |||
| 266 | Ga0068852_100002042 | |||
| 267 | Ga0068859_100031604 | |||
| 268 | Ga0068851_10000001 | |||
| 269 | Ga0068858_100001056 | |||
| 270 | Ga0081455_10179872 | |||
| 271 | Ga0075365_10032094 | |||
| 272 | Ga0075365_10069358 | |||
| 273 | Ga0075364_10008218 | |||
| 274 | Ga0075370_10021987 | |||
| 275 | Ga0075428_100000772 | |||
| 276 | Ga0075430_100045860 | |||
| 277 | Ga0075431_100005188 | |||
| 278 | Ga0097620_100031604 | |||
| 279 | Ga0105240_10004917 | |||
| 280 | Ga0105240_10180153 | |||
| 281 | Ga0105245_10007206 | |||
| 282 | Ga0105245_10095568 | |||
| 283 | Ga0105247_10228698 | |||
| 284 | Ga0105241_10032398 | |||
| 285 | Ga0105241_10118649 | |||
| 286 | Ga0105248_10002215 | |||
| 287 | Ga0105248_10018919 | |||
| 288 | Ga0105237_10000341 | |||
| 289 | Ga0105237_10016321 | |||
| 290 | Ga0105237_10192023 | |||
| 291 | Ga0105238_10007549 | |||
| 292 | Ga0105238_10024235 | |||
| 293 | Ga0105239_10239257 | |||
| 294 | Ga0105246_10125400 | |||
| 295 | Ga0157371_10001286 | |||
| 296 | Ga0157370_10007734 | |||
| 297 | Ga0157369_10010340 | |||
| 298 | Ga0171462_1001 | |||
| 299 | Ga0163162_10317115 | |||
| 300 | Ga0157372_10027817 | |||
| 301 | Ga0163163_10054750 | |||
| 302 | Ga0157379_10033738 | |||
| 303 | Ga0157376_10561497 | |||
| 304 | Ga0163161_10202863 | |||
| 305 | Ga0209672_100003 | |||
| 306 | Ga0209147_100633 | |||
| 307 | Ga0209646_1000167 | |||
| 308 | Ga0209148_1000004 | |||
| 309 | Ga0209148_1000608 | |||
| 310 | Ga0209148_1001580 | |||
| 311 | Ga0209148_1020189 | |||
| 312 | Ga0209455_1000022 | |||
| 313 | Ga0209455_1000843 | |||
| 314 | Ga0207656_10000002 | |||
| 315 | Ga0207710_10086958 | |||
| 316 | Ga0207705_10000001 | |||
| 317 | Ga0207684_10246652 | |||
| 318 | Ga0207684_10396257 | |||
| 319 | Ga0207654_10000001 | |||
| 320 | Ga0207695_10028108 | |||
| 321 | Ga0207695_10351731 | |||
| 322 | Ga0207671_10000002 | |||
| 323 | Ga0207671_10066807 | |||
| 324 | Ga0207657_10030315 | |||
| 325 | Ga0207646_10085495 | |||
| 326 | Ga0207694_10004015 | |||
| 327 | Ga0207687_10025899 | |||
| 328 | Ga0207687_10043998 | |||
| 329 | Ga0207690_10001529 | |||
| 330 | Ga0207711_10001372 | |||
| 331 | Ga0207711_10013129 | |||
| 332 | Ga0207667_10000844 | |||
| 333 | Ga0207667_10001333 | |||
| 334 | Ga0207667_10136072 | |||
| 335 | Ga0207667_10338346 | |||
| 336 | Ga0207658_10072527 | |||
| 337 | Ga0207677_10102710 | |||
| 338 | Ga0207703_10000168 | |||
| 339 | Ga0207702_10027650 | |||
| 340 | Ga0207702_10064477 | |||
| 341 | Ga0207641_10034346 | |||
| 342 | Ga0207674_10027876 | |||
| 343 | Ga0207683_10473293 | |||
| 344 | Ga0207698_10000183 | |||
| 345 | Ga0207698_10000563 | |||
| 346 | Ga0268266_10183050 | |||
| 347 | Ga0307515_10134981 | |||
| 348 | Ga0307514_10020818 | |||
| 349 | Ga0307406_10000025 | |||
| 350 | Ga0307406_10000973 | |||
| 351 | Ga0307406_10140410 | |||
| 352 | Ga0307412_10065503 | |||
| 353 | Ga0395900_0002216 | |||
| 354 | Ga0395898_0001754 | |||
| 355 | Ga0439465_0062780 | |||
| 356 | Ga0451837_1786111 | |||
| 357 | Ga0466965_0000020 | |||
| 358 | Ga0466965_0147085 | |||
| 359 | Ga0466961_0108732 | |||
| 360 | Ga0466970_0158207 | |||
| 361 | Ga0495627_000753 | |||
| 362 | Ga0495590_0000308 | |||
| 363 | Ga0495650_0029361 | |||
| 364 | Ga0495620_0017780 | |||
| 365 | Ga0495643_0086562 | |||
| 366 | Ga0495672_0008614 | |||
| 367 | Ga0496100_0008510 | |||
| 368 | Ga0496101_0019158 | |||
| 369 | Ga0496101_0100546 | |||
| 370 | Ga0496102_0036786 | |||
| 371 | Ga0496102_0143845 | |||
| 372 | Ga0496103_0011066 | |||
| 373 | Ga0496103_0156056 | |||
| 374 | Ga0496104_0337281 | |||
| 375 | Ga0496105_0025470 | |||
| 376 | Ga0496107_0014419 | |||
| 377 | Ga0496108_0025200 | |||
| 378 | Ga0496108_0514675 | |||
| 379 | Ga0496110_0093540 | |||
| 380 | Ga0496111_0029180 | |||
| 381 | Ga0496113_0078449 | |||
| 382 | Ga0496114_0023595 | |||
| 383 | Ga0496114_0037312 | |||
| 384 | Ga0496114_0065410 | |||
| 385 | Ga0496115_0166042 | |||
| 386 | Ga0496115_0236674 | |||
| 387 | Ga0496116_0068674 | |||
| 388 | Ga0496119_0001566 | |||
| 389 | Ga0496119_0001666 | |||
| 390 | Ga0496119_0003156 | |||
| 391 | Ga0496119_0052968 | |||
| 392 | Ga0496119_0145373 | |||
| 393 | Ga0496120_0000890 | |||
| 394 | Ga0496120_0021043 | |||
| 395 | Ga0496120_0079738 | |||
| 396 | Ga0496120_0209438 | |||
| 397 | Ga0496121_0000025 | |||
| 398 | Ga0496121_0038018 | |||
| 399 | Ga0496122_0001019 | |||
| 400 | Ga0496123_0001633 | |||
| 401 | Ga0496125_0000120 | |||
| 402 | Ga0496126_0018316 | |||
| 403 | Ga0501031_0231084 | |||
| 404 | Ga0501032_0032789 | |||
| 405 | Ga0501032_0043458 | |||
| 406 | Ga0501033_0025222 | |||
| 407 | Ga0501034_0002427 | |||
| 408 | Ga0501034_0174627 | |||
| 409 | Ga0501034_0240858 | |||
| 410 | Ga0501036_0296516 | |||
| 411 | Ga0501037_0240718 | |||
| 412 | Ga0501038_0006032 | |||
| 413 | Ga0501038_0240717 | |||
| 414 | Ga0501038_0272935 | |||
| 415 | Ga0501039_0068299 | |||
| 416 | Ga0501043_0013331 | |||
| 417 | Ga0501043_0266076 | |||
| 418 | Ga0501047_0001282 | |||
| 419 | Ga0501067_0233731 | |||
| 420 | Ga0501070_0000133 | |||
| 421 | Ga0501070_0000610 | |||
| 422 | Ga0501070_0165115 | |||
| 423 | Ga0501070_0311172 | |||
| 424 | Ga0501070_0321538 | |||
| 425 | Ga0501073_0000028 | |||
| 426 | Ga0501035_0013019 | |||
| 427 | Ga0501044_0022882 | |||
| 428 | nmdc:mga00v17_38343_c1 | |||
| 429 | nmdc:mga0yw44_56231_c1 | |||
| 430 | nmdc:mga0yw44_89168_c1 | |||
| 431 | nmdc:mga06z11_33789_c1 | |||
| 432 | nmdc:mga06r32_6720_c1 | |||
| 433 | nmdc:mga0sz30_39588_c1 | |||
| 434 | Ga0500651_0000442 | |||
| 435 | Ga0500650_0003169 | |||
| 436 | Ga0500556_0000064 | |||
| 437 | Ga0500562_004616 | |||
| 438 | Ga0500593_000759 | |||
| 439 | Ga0500655_011668 | |||
| 440 | Ga0500559_0000968 | |||
| 441 | Ga0500568_0000281 | |||
| 442 | Ga0500568_0012314 | |||
| 443 | Ga0500573_0002041 | |||
| 444 | Ga0500573_0003015 | |||
| 445 | Ga0500573_0050139 | |||
| 446 | Ga0500573_0081047 | |||
| 447 | Ga0500573_0094889 | |||
| 448 | Ga0500573_0147784 | |||
| 449 | Ga0500577_0070504 | |||
| 450 | Ga0500616_0000205 | |||
| 451 | Ga0500620_000025 | |||
| 452 | 2515851253 | |||
| 453 | 2643733615 | |||
| 454 | 2643849377 | |||
| 455 | 2643888534 | |||
| 456 | 2643996439 | |||
| 457 | 2644170190 | |||
| 458 | 2644680233 | |||
| 459 | 2676475757 | |||
| 460 | 2676485556 | |||
| 461 | 2730229684 | |||
| 462 | 2774400244 | |||
| 463 | 2808631769 | |||
| 464 | 2812322449 | |||
| 465 | 2821269369 | |||
| 466 | 2827630318 | |||
| 467 | 2852646084 | |||
| 468 | 2857738912 | |||
| 469 | 2862994988 | |||
| 470 | 2870624360 | |||
| 471 | 2939658853 | |||
| 472 | 2964327248 | |||
| 473 | 2984580115 | |||
| 474 | 2990258966 | |||
| 475 | 8004185117 | |||
| 476 | 8045832715 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3vzd-assembly2.cif.gz_B | crystal structure of sphingosine kinase 1 with inhibitor and adp | 0.866 | 2 | 299 |
| 3vzb-assembly1.cif.gz_A | crystal structure of sphingosine kinase 1 | 0.8624 | 2 | 299 |
| 3vzb-assembly3.cif.gz_C | crystal structure of sphingosine kinase 1 | 0.8598 | 2 | 299 |
| 4l02-assembly2.cif.gz_B | crystal structure of sphk1 with inhibitor | 0.8577 | 2 | 299 |
| 2qvl-assembly1.cif.gz_A | crystal structure of diacylglycerol kinase | 0.8558 | 2 | 300 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WP29_144_297_2.60.200.40 | Mainly Beta;Sandwich;Tumour Suppressor Smad4; | 0.9561 | 135 | 291 | 2.60.200.40 |
| af_P9WP29_144_297_2.60.200.40 | Mainly Beta;Sandwich;Tumour Suppressor Smad4; | 0.9381 | 135 | 291 | 2.60.200.40 |
| af_P9WP29_9_143_3.40.50.10330 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Probable inorganic polyphosphate/atp-NAD kinase; domain 1 | 0.9313 | 2 | 131 | 3.40.50.10330 |
| af_O94613_1_159_3.40.50.360 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain | 0.9011 | 2 | 38 | 3.40.50.360 |
| af_P9WP29_9_143_3.40.50.10330 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Probable inorganic polyphosphate/atp-NAD kinase; domain 1 | 0.8916 | 2 | 131 | 3.40.50.10330 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7W8A7W2-F1-model_v4 | Diacylglycerol kinase (ATP) (EC 2.7.1.107) | 0.9695 | 1 | 299 |
GO:0004143
GO:0005524 GO:0005886 GO:0008654 GO:0046872 |
| AF-A0A1Q3L8Q0-F1-model_v4 | DAGKc domain-containing protein | 0.9611 | 6 | 301 |
GO:0004143
GO:0005524 GO:0005886 GO:0008654 GO:0046872 |
| AF-A0A7W8A7W2-F1-model_v4 | Diacylglycerol kinase (ATP) (EC 2.7.1.107) | 0.9599 | 1 | 299 |
GO:0004143
GO:0005524 GO:0005886 GO:0008654 GO:0046872 |
| AF-A0A0Q2MJC1-F1-model_v4 | Diacylglycerol kinase | 0.9557 | 2 | 301 |
GO:0004143
GO:0005524 GO:0005886 GO:0008654 GO:0046872 |
| AF-A0A3A4B5Q7-F1-model_v4 | Diacylglycerol kinase | 0.955 | 2 | 301 |
GO:0004143
GO:0005524 GO:0005886 GO:0008654 GO:0046872 |