F350129

General Info

Members Datasets Scaffolds Average Seq Length
237 189 210 390

Family's Representative Sequence

Representative Sequence 3300031507|Ga0307509_10007923|Ga0307509_100079238
Length 379
Sequence MDIDALRRETPGATGRVHLNNAGAGLMTRQTLRAVTSHLELEAAIGGYEAADQERERIDAAHVDIARLVGGRSDEIALFDNSTHAWNAAFYSMTFKPGDRILTGRSEYGSNVLAYFQVAERTGAEIVVVPNDESGQLDTTALANLIDERTRLVGVSHVPTGGGLVNPAAEIGRITRAAGVPFLLDATQSVGQFPVDVAEIGCDMLTATGRKFLRGPRGTGFLWVRSEALNHLDPFVVEINSATWDGRRGFAWQHGARRFETWESSYANILGLDAAVRQALEAYLRDRLDALPGVTTYDLGRDRCAIVTAKLDAVPTADVAAMLANQGINVSTTDPDHSQFDTEVRGVHPLVRLSPHYYNTEAELDRAVEAIADLARTVR

Samples

Sample ID Description Type Environment
1 2513237094 Bradyrhizobium sp. WSM3983 Isolate Nodule
2 2643221548 Streptomyces sp. Root55 Isolate Unclassified
3 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
4 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
5 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
6 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
7 2888378607 Bradyrhizobium sp. LCT2 Isolate Unclassified
8 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
9 2935777560 Bradyrhizobium sp. LB14.3 Isolate Nodule
10 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
11 2935793552 Bradyrhizobium sp. LB8.2 Isolate Nodule
12 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
13 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
14 3005594810 Bradyrhizobium sp. CCBAU 53340 Isolate Nodule
15 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
16 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
17 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
18 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
19 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
20 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
21 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
22 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
25 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
26 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
27 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
28 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
31 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
32 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
33 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
34 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
35 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
41 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
44 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
45 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
46 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
47 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
48 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
49 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
50 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
51 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
66 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
93 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
94 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
95 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
96 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
97 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
98 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
99 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
100 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
101 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
104 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
105 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
106 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
107 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
108 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
109 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
110 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
111 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
112 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
113 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
114 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
115 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
116 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
117 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
118 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
119 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
120 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
121 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
122 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
123 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
124 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
125 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
126 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
127 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
128 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
129 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
130 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
131 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
132 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
133 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
134 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
135 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
136 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
137 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
138 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
139 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
140 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
141 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
142 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
143 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
144 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
145 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
146 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
147 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
148 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
149 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
150 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
151 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
152 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
153 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
154 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
155 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
156 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
157 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
158 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
159 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
160 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
161 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
162 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
163 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
164 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
165 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
166 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
167 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
168 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
169 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
170 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
173 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
174 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
175 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
176 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
177 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
178 8016522445 Bradyrhizobium sp. LM6.9 Isolate Nodule
179 8016530956 Bradyrhizobium sp. LM6.11 Isolate Nodule
180 8016539877 Bradyrhizobium sp. LM6.10 Isolate Nodule
181 8016548790 Bradyrhizobium sp. LM3.6 Isolate Nodule
182 8016557553 Bradyrhizobium sp. LM3.4 Isolate Nodule
183 8016566248 Bradyrhizobium sp. LM3.2 Isolate Nodule
184 8016575299 Bradyrhizobium sp. LM2.9 Isolate Nodule
185 8016595262 Bradyrhizobium sp. LM2.3 Isolate Nodule
186 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
187 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
188 8019530166 Bradyrhizobium sp. LM4.3 Isolate Nodule
189 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.61
Metatranscriptomes 0
Isolates 11.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.17
Nodule 8.02
Rhizoplane 5.49
Rhizosphere 72.15
Stem 0
Stem Tuber 0
Unclassified 7.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24744J21845_10002564 3300002077 Bacteria 3710
2 JGI25407J50210_10002061 3300003373 Bacteria 4690
3 Ga0070676_10065758 3300005328 Bacteria 2165
4 Ga0070683_100013944 3300005329 Bacteria 7022
5 Ga0070670_100124188 3300005331 Bacteria 2228
6 Ga0068869_100016741 3300005334 Bacteria 4948
7 Ga0070692_10039464 3300005345 Bacteria 2411
8 Ga0070668_100138778 3300005347 Bacteria 1957
9 Ga0070667_100080943 3300005367 Bacteria 2778
10 Ga0070709_10012716 3300005434 Bacteria 4715
11 Ga0070713_100072095 3300005436 Bacteria 2921
12 Ga0070711_100010777 3300005439 Bacteria 5668
13 Ga0070694_100234918 3300005444 Bacteria 1381
14 Ga0070708_100009388 3300005445 Bacteria 7886
15 Ga0070662_100113967 3300005457 Bacteria 2064
16 Ga0068867_100038227 3300005459 Bacteria 3493
17 Ga0070685_10011581 3300005466 Bacteria 4619
18 Ga0070706_100021693 3300005467 Bacteria 5915
19 Ga0070706_100098810 3300005467 Bacteria 2712
20 Ga0070707_100035332 3300005468 Bacteria 4767
21 Ga0070707_100041058 3300005468 Bacteria 4427
22 Ga0070707_100297410 3300005468 Bacteria 1569
23 Ga0070698_100022838 3300005471 Bacteria 6540
24 Ga0070698_100043791 3300005471 Bacteria 4587
25 Ga0070698_100045450 3300005471 Bacteria 4495
26 Ga0070699_100021399 3300005518 Bacteria 5578
27 Ga0068853_100019695 3300005539 Bacteria 5601
28 Ga0070665_100121651 3300005548 Bacteria 2612
29 Ga0068855_100176430 3300005563 Bacteria 2418
30 Ga0068856_100114869 3300005614 Bacteria 2691
31 Ga0070702_100065506 3300005615 Bacteria 2128
32 Ga0068866_10053177 3300005718 Bacteria 2069
33 Ga0068858_100126123 3300005842 Bacteria 2397
34 Ga0081538_10000191 3300005981 Bacteria 67563
35 Ga0081538_10002637 3300005981 Bacteria 17326
36 Ga0081538_10005820 3300005981 Bacteria 10988
37 Ga0081538_10032295 3300005981 Bacteria 3511
38 Ga0070717_10046024 3300006028 Bacteria 3569
39 Ga0075365_10058292 3300006038 Bacteria 2571
40 Ga0075363_100014722 3300006048 Bacteria 3831
41 Ga0075363_100027254 3300006048 Bacteria 2928
42 Ga0075363_100035503 3300006048 Bacteria 2609
43 Ga0075364_10000535 3300006051 Bacteria 19353
44 Ga0075364_10080261 3300006051 Bacteria 2156
45 Ga0075364_10089582 3300006051 Bacteria 2040
46 Ga0070716_100013395 3300006173 Bacteria 4178
47 Ga0070712_100056729 3300006175 Bacteria 2748
48 Ga0075370_10002290 3300006353 Bacteria 8831
49 Ga0075428_100087333 3300006844 Bacteria 3402
50 Ga0075433_10169865 3300006852 Bacteria 1940
51 Ga0111539_10029256 3300009094 Bacteria 6714
52 Ga0111539_10118000 3300009094 Bacteria 3110
53 Ga0105245_10097901 3300009098 Bacteria 2710
54 Ga0105247_10052665 3300009101 Bacteria 2510
55 Ga0105247_10132226 3300009101 Bacteria 1627
56 Ga0114129_10090493 3300009147 Bacteria 4242
57 Ga0105248_10071324 3300009177 Bacteria 3902
58 Ga0105237_10036975 3300009545 Bacteria 4937
59 Ga0105237_10170730 3300009545 Bacteria 2175
60 Ga0105246_10049589 3300011119 Bacteria 2875
61 Ga0157374_10089182 3300013296 Bacteria 2938
62 Ga0163162_10056180 3300013306 Bacteria 3965
63 Ga0157372_10205983 3300013307 Bacteria 2279
64 Ga0163163_10045593 3300014325 Bacteria 4304
65 Ga0157379_10219204 3300014968 Bacteria 1724
66 Ga0163161_10061948 3300017792 Bacteria 2724
67 Ga0207692_10037064 3300025898 Bacteria 2383
68 Ga0207710_10037202 3300025900 Bacteria 2149
69 Ga0207688_10071535 3300025901 Bacteria 1969
70 Ga0207647_10003483 3300025904 Bacteria 11799
71 Ga0207685_10015789 3300025905 Bacteria 2401
72 Ga0207699_10048561 3300025906 Bacteria 2494
73 Ga0207684_10002745 3300025910 Bacteria 17539
74 Ga0207684_10056036 3300025910 Bacteria 3344
75 Ga0207684_10132781 3300025910 Bacteria 2137
76 Ga0207684_10301025 3300025910 Bacteria 1382
77 Ga0207671_10185433 3300025914 Bacteria 1621
78 Ga0207693_10043448 3300025915 Bacteria 3536
79 Ga0207657_10089679 3300025919 Bacteria 2568
80 Ga0207646_10000349 3300025922 Bacteria 62593
81 Ga0207646_10237599 3300025922 Bacteria 1646
82 Ga0207687_10045722 3300025927 Bacteria 3027
83 Ga0207700_10081767 3300025928 Bacteria 2523
84 Ga0207700_10206378 3300025928 Bacteria 1659
85 Ga0207664_10238923 3300025929 Bacteria 1581
86 Ga0207706_10046562 3300025933 Bacteria 3839
87 Ga0207665_10001371 3300025939 Bacteria 16413
88 Ga0207689_10017228 3300025942 Bacteria 6114
89 Ga0207661_10129297 3300025944 Bacteria 2161
90 Ga0207658_10103745 3300025986 Bacteria 2233
91 Ga0207639_10016932 3300026041 Bacteria 5165
92 Ga0207639_10210692 3300026041 Bacteria 1673
93 Ga0207678_10080880 3300026067 Bacteria 2781
94 Ga0207676_10052456 3300026095 Bacteria 3188
95 Ga0207674_10058958 3300026116 Bacteria 3886
96 Ga0207675_100048621 3300026118 Bacteria 3959
97 Ga0207683_10049259 3300026121 Bacteria 3688
98 Ga0268265_10047048 3300028380 Bacteria 3230
99 Ga0265338_10004057 3300028800 Bacteria 20069
100 Ga0307511_10003062 3300030521 Bacteria 17254
101 Ga0307509_10002102 3300031507 Bacteria 32828
102 Ga0307509_10007923 3300031507 Bacteria 13718
103 Ga0307508_10001273 3300031616 Bacteria 28664
104 Ga0307514_10087606 3300031649 Bacteria 2281
105 Ga0307518_10003285 3300031838 Bacteria 11672
106 Ga0307406_10073822 3300031901 Bacteria 2244
107 Ga0307409_100000386 3300031995 Bacteria 18695
108 Ga0307416_100083960 3300032002 Bacteria 2704
109 Ga0307416_100160927 3300032002 Bacteria 2075
110 Ga0307415_100042311 3300032126 Bacteria 3031
111 Ga0395900_0188766 3300037418 Bacteria 2091
112 Ga0395901_0040823 3300038443 Bacteria 4806
113 Ga0436365_0207493 3300039437 Bacteria 11153
114 Ga0436362_0659318 3300039453 Bacteria 1356
115 Ga0451853_0612820 3300041512 Bacteria 4738
116 Ga0439457_000230 3300042014 Bacteria 14989
117 Ga0439459_0017342 3300042438 Bacteria 1341
118 Ga0466969_0000250 3300044656 Bacteria 29585
119 Ga0466966_0004836 3300044684 Bacteria 8861
120 Ga0466968_0000867 3300044735 Bacteria 10607
121 Ga0466970_0000010 3300044765 Bacteria 93488
122 Ga0466967_0412638 3300045976 Bacteria 1315
123 Ga0495651_0005286 3300046462 Bacteria 9842
124 Ga0495580_0094965 3300046472 Bacteria 2074
125 Ga0495580_0171427 3300046472 Bacteria 1500
126 Ga0495662_0000857 3300046476 Bacteria 14846
127 Ga0495662_0082775 3300046476 Bacteria 1562
128 Ga0495664_0005512 3300046477 Bacteria 6951
129 Ga0495664_0064963 3300046477 Bacteria 2175
130 Ga0495664_0065238 3300046477 Bacteria 2170
131 Ga0495608_0015760 3300046511 Bacteria 5231
132 Ga0495618_0099132 3300046514 Bacteria 1865
133 Ga0495628_0022633 3300046516 Bacteria 5161
134 Ga0495628_0068629 3300046516 Bacteria 2765
135 Ga0495630_0011515 3300046517 Bacteria 6404
136 Ga0495666_0042801 3300046526 Bacteria 2188
137 Ga0495652_0047527 3300046529 Bacteria 3679
138 Ga0495652_0064740 3300046529 Bacteria 3074
139 Ga0495665_0043039 3300046531 Bacteria 2402
140 Ga0495640_0002216 3300046533 Bacteria 15548
141 Ga0495586_0011629 3300046535 Bacteria 4682
142 Ga0495586_0048652 3300046535 Bacteria 2292
143 Ga0495586_0115685 3300046535 Bacteria 1495
144 Ga0495645_0033836 3300046543 Bacteria 3728
145 Ga0495645_0093010 3300046543 Bacteria 2152
146 Ga0495645_0118625 3300046543 Bacteria 1865
147 Ga0495667_0013529 3300046559 Bacteria 5519
148 Ga0495634_0017363 3300046642 Bacteria 5136
149 Ga0495635_0002166 3300046663 Bacteria 13337
150 Ga0495635_0047241 3300046663 Bacteria 2969
151 Ga0495657_0014717 3300046675 Bacteria 5741
152 Ga0495657_0020465 3300046675 Bacteria 4755
153 Ga0495599_0033028 3300046678 Bacteria 3250
154 Ga0495599_0117417 3300046678 Bacteria 1655
155 Ga0495623_0000220 3300046679 Bacteria 36632
156 Ga0495646_0012599 3300046680 Bacteria 5374
157 Ga0495646_0024386 3300046680 Bacteria 3808
158 Ga0495613_0002955 3300046689 Bacteria 12718
159 Ga0495624_0028004 3300046690 Bacteria 3684
160 Ga0495589_0073999 3300046794 Bacteria 1662
161 Ga0495600_0024490 3300046809 Bacteria 3885
162 Ga0495581_0012102 3300047315 Bacteria 4993
163 Ga0495581_0012462 3300047315 Bacteria 4925
164 Ga0495604_0000384 3300047317 Bacteria 39942
165 Ga0495604_0001684 3300047317 Bacteria 18185
166 Ga0495674_0071573 3300047319 Bacteria 2992
167 Ga0495674_0089478 3300047319 Bacteria 2631
168 Ga0495676_0003499 3300047321 Bacteria 14216
169 Ga0495683_0090100 3300047323 Bacteria 1487
170 Ga0495687_033395 3300047443 Bacteria 2334
171 Ga0495675_0002420 3300047444 Bacteria 11157
172 Ga0495675_0039833 3300047444 Bacteria 2993
173 Ga0495685_005712 3300047447 Bacteria 4066
174 Ga0495593_0016256 3300047673 Bacteria 4200
175 Ga0495602_0053997 3300048088 Bacteria 3551
176 Ga0495614_0004116 3300048089 Bacteria 6545
177 Ga0496102_0023969 3300048905 Bacteria 5424
178 Ga0496105_0030414 3300048908 Bacteria 4425
179 Ga0496105_0210136 3300048908 Bacteria 1586
180 Ga0496106_0034974 3300048909 Bacteria 3755
181 Ga0496108_0002944 3300048911 Bacteria 13691
182 Ga0496109_0018219 3300048912 Bacteria 6166
183 Ga0496109_0073661 3300048912 Bacteria 3138
184 Ga0496110_0070282 3300048913 Bacteria 3102
185 Ga0496110_0196469 3300048913 Bacteria 1832
186 Ga0496111_0191044 3300048914 Bacteria 1522
187 Ga0496112_0169711 3300048915 Bacteria 2147
188 Ga0496113_0209005 3300048916 Bacteria 1553
189 Ga0496115_0090946 3300048918 Bacteria 2494
190 Ga0496118_0046453 3300048921 Bacteria 3378
191 Ga0496120_0077658 3300048923 Bacteria 1807
192 Ga0496121_0221750 3300048924 Bacteria 1331
193 Ga0496124_0165934 3300048927 Bacteria 1716
194 nmdc:mga03n38_11694_c1 3300050490 Bacteria 3279
195 nmdc:mga03n38_34118_c1 3300050490 Bacteria 2171
196 nmdc:mga00v17_165469_c1 3300050491 Bacteria 1425
197 nmdc:mga00v17_8042_c1 3300050491 Bacteria 5659
198 nmdc:mga0yw44_42267_c1 3300050492 Bacteria 2717
199 nmdc:mga0k408_67872_c1 3300050493 Bacteria 2079
200 nmdc:mga07m45_4761_c1 3300050496 Bacteria 6671
201 nmdc:mga05p37_339701_c1 3300050507 Bacteria 1771
202 nmdc:mga0qj67_30053_c1 3300050509 Bacteria 4225
203 nmdc:mga08y16_153708_c1 3300050511 Bacteria 2391
204 nmdc:mga0a205_162230_c1 3300050515 Bacteria 2131
205 Ga0495601_0000995 3300053077 Bacteria 15497
206 Ga0495601_0007963 3300053077 Bacteria 6240
207 Ga0495601_0030704 3300053077 Bacteria 3338
208 Ga0495612_0001596 3300053078 Bacteria 9339
209 Ga0500616_0000305 3300053153 Bacteria 70598
210 Ga0500661_004827 3300055283 Bacteria 2520

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006852 Ga0075433_10169865 Ga0075433_101698651 343
2 3300025910 Ga0207684_10056036 Ga0207684_100560362 356
3 3300025928 Ga0207700_10206378 Ga0207700_102063782 356
4 3300047323 Ga0495683_0090100 Ga0495683_0090100_58_1131 357
5 3300048916 Ga0496113_0209005 Ga0496113_0209005_459_1532 357
6 3300046476 Ga0495662_0082775 Ga0495662_0082775_394_1473 358
7 3300046531 Ga0495665_0043039 Ga0495665_0043039_52_1137 358
8 iso_pu_bacteria 2935769743 2935772587 361
9 iso_pu_bacteria 2935777560 2935783139 361
10 iso_pu_bacteria 2935785616 2935790880 361
11 iso_pu_bacteria 2935793552 2935799419 361
12 iso_pu_bacteria 3005594810 3005598666 361
13 iso_pu_bacteria 8016522445 8016530185 361
14 iso_pu_bacteria 8016530956 8016535436 361
15 iso_pu_bacteria 8016539877 8016548638 361
16 iso_pu_bacteria 8016548790 8016553493 361
17 iso_pu_bacteria 8016557553 8016561876 361
18 iso_pu_bacteria 8016566248 8016573771 361
19 iso_pu_bacteria 8016575299 8016577895 361
20 iso_pu_bacteria 8016595262 8016599703 361
21 iso_pu_bacteria 8016603502 8016611144 361
22 iso_pu_bacteria 8016613128 8016622491 361
23 iso_pu_bacteria 8019530166 8019535176 361
24 3300039453 Ga0436362_0659318 Ga0436362_0659318_175_1299 362
25 3300046477 Ga0495664_0064963 Ga0495664_0064963_38_1171 362
26 3300005467 Ga0070706_100098810 Ga0070706_1000988102 364
27 3300005468 Ga0070707_100035332 Ga0070707_1000353326 364
28 3300005471 Ga0070698_100043791 Ga0070698_1000437916 364
29 3300025910 Ga0207684_10002745 Ga0207684_100027452 364
30 3300025922 Ga0207646_10000349 Ga0207646_1000034954 364
31 3300028380 Ga0268265_10047048 Ga0268265_100470483 365
32 3300047443 Ga0495687_033395 Ga0495687_033395_41_1138 365
33 3300048924 Ga0496121_0221750 Ga0496121_0221750_191_1288 365
34 3300050491 nmdc:mga00v17_165469_c1 nmdc:mga00v17_165469_c1_294_1391 365
35 3300005468 Ga0070707_100041058 Ga0070707_1000410582 366
36 3300044656 Ga0466969_0000250 Ga0466969_0000250_504_1625 373
37 3300044684 Ga0466966_0004836 Ga0466966_0004836_7018_8139 373
38 3300044735 Ga0466968_0000867 Ga0466968_0000867_1907_3028 373
39 3300044765 Ga0466970_0000010 Ga0466970_0000010_23338_24459 373
40 3300039437 Ga0436365_0207493 Ga0436365_0207493_2954_4078 374
41 3300005471 Ga0070698_100045450 Ga0070698_1000454504 375
42 3300005981 Ga0081538_10032295 Ga0081538_100322952 375
43 3300028800 Ga0265338_10004057 Ga0265338_1000405719 376
44 3300050515 nmdc:mga0a205_162230_c1 nmdc:mga0a205_162230_c1_150_1322 377
45 3300031507 Ga0307509_10007923 Ga0307509_100079238 378
46 3300046535 Ga0495586_0048652 Ga0495586_0048652_830_2011 378
47 3300046543 Ga0495645_0033836 Ga0495645_0033836_1866_3047 378
48 3300046663 Ga0495635_0002166 Ga0495635_0002166_5386_6567 378
49 3300046680 Ga0495646_0012599 Ga0495646_0012599_3966_5147 378
50 3300047444 Ga0495675_0002420 Ga0495675_0002420_685_1866 378
51 3300053077 Ga0495601_0007963 Ga0495601_0007963_1719_2900 378
52 3300053078 Ga0495612_0001596 Ga0495612_0001596_4907_6088 378
53 iso_pu_bacteria 2643221548 2643761004 386
54 iso_pu_bacteria 2643221682 2644462328 386
55 iso_pu_bacteria 2946064051 2946064084 386
56 3300031901 Ga0307406_10073822 Ga0307406_100738223 388
57 3300031995 Ga0307409_100000386 Ga0307409_10000038615 388
58 3300032002 Ga0307416_100083960 Ga0307416_1000839601 388
59 iso_pu_bacteria 2784746763 2785346085 388
60 iso_pu_bacteria 2863404153 2863407357 388
61 iso_pu_bacteria 2888378607 2888383519 388
62 iso_pu_bacteria 8056667051 8056672279 388
63 3300005329 Ga0070683_100013944 Ga0070683_1000139447 389
64 3300025944 Ga0207661_10129297 Ga0207661_101292973 389
65 3300003373 JGI25407J50210_10002061 JGI25407J50210_100020614 390
66 3300005445 Ga0070708_100009388 Ga0070708_1000093883 390
67 3300005468 Ga0070707_100297410 Ga0070707_1002974101 390
68 3300005518 Ga0070699_100021399 Ga0070699_1000213993 390
69 3300025910 Ga0207684_10132781 Ga0207684_101327812 390
70 3300025910 Ga0207684_10301025 Ga0207684_103010251 390
71 3300025922 Ga0207646_10237599 Ga0207646_102375991 390
72 3300046477 Ga0495664_0065238 Ga0495664_0065238_551_1723 390
73 3300046529 Ga0495652_0064740 Ga0495652_0064740_1714_2886 390
74 3300046535 Ga0495586_0115685 Ga0495586_0115685_186_1358 390
75 3300046543 Ga0495645_0118625 Ga0495645_0118625_60_1232 390
76 3300046678 Ga0495599_0117417 Ga0495599_0117417_146_1318 390
77 3300047319 Ga0495674_0071573 Ga0495674_0071573_914_2086 390
78 iso_pu_bacteria 2513237094 2513637732 390
79 3300006048 Ga0075363_100035503 Ga0075363_1000355031 391
80 3300006051 Ga0075364_10000535 Ga0075364_100005359 391
81 3300031649 Ga0307514_10087606 Ga0307514_100876062 391
82 3300032002 Ga0307416_100160927 Ga0307416_1001609272 391
83 3300050490 nmdc:mga03n38_11694_c1 nmdc:mga03n38_11694_c1_218_1393 391
84 3300050490 nmdc:mga03n38_34118_c1 nmdc:mga03n38_34118_c1_166_1341 391
85 iso_pu_bacteria 2947224130 2947229519 391
86 3300005331 Ga0070670_100124188 Ga0070670_1001241882 392
87 3300005471 Ga0070698_100022838 Ga0070698_1000228385 392
88 3300005539 Ga0068853_100019695 Ga0068853_1000196953 392
89 3300005563 Ga0068855_100176430 Ga0068855_1001764302 392
90 3300005614 Ga0068856_100114869 Ga0068856_1001148694 392
91 3300006038 Ga0075365_10058292 Ga0075365_100582922 392
92 3300006048 Ga0075363_100014722 Ga0075363_1000147223 392
93 3300006048 Ga0075363_100027254 Ga0075363_1000272543 392
94 3300006051 Ga0075364_10080261 Ga0075364_100802612 392
95 3300006175 Ga0070712_100056729 Ga0070712_1000567292 392
96 3300006353 Ga0075370_10002290 Ga0075370_100022902 392
97 3300006844 Ga0075428_100087333 Ga0075428_1000873333 392
98 3300009101 Ga0105247_10132226 Ga0105247_101322261 392
99 3300009177 Ga0105248_10071324 Ga0105248_100713245 392
100 3300009545 Ga0105237_10036975 Ga0105237_100369754 392
101 3300011119 Ga0105246_10049589 Ga0105246_100495892 392
102 3300014325 Ga0163163_10045593 Ga0163163_100455935 392
103 3300025900 Ga0207710_10037202 Ga0207710_100372022 392
104 3300025904 Ga0207647_10003483 Ga0207647_100034832 392
105 3300026041 Ga0207639_10016932 Ga0207639_100169323 392
106 3300026067 Ga0207678_10080880 Ga0207678_100808803 392
107 3300026116 Ga0207674_10058958 Ga0207674_100589584 392
108 3300030521 Ga0307511_10003062 Ga0307511_1000306211 392
109 3300031507 Ga0307509_10002102 Ga0307509_100021028 392
110 3300031616 Ga0307508_10001273 Ga0307508_1000127319 392
111 3300031838 Ga0307518_10003285 Ga0307518_100032859 392
112 3300041512 Ga0451853_0612820 Ga0451853_0612820_195_1376 392
113 3300042014 Ga0439457_000230 Ga0439457_000230_6813_7991 392
114 3300046472 Ga0495580_0094965 Ga0495580_0094965_23_1204 392
115 3300046516 Ga0495628_0068629 Ga0495628_0068629_519_1712 392
116 3300046642 Ga0495634_0017363 Ga0495634_0017363_3828_5009 392
117 3300046675 Ga0495657_0020465 Ga0495657_0020465_2349_3530 392
118 3300046679 Ga0495623_0000220 Ga0495623_0000220_25177_26358 392
119 3300046689 Ga0495613_0002955 Ga0495613_0002955_10018_11199 392
120 3300046690 Ga0495624_0028004 Ga0495624_0028004_972_2153 392
121 3300046794 Ga0495589_0073999 Ga0495589_0073999_467_1648 392
122 3300047315 Ga0495581_0012102 Ga0495581_0012102_1521_2702 392
123 3300047317 Ga0495604_0000384 Ga0495604_0000384_64_1245 392
124 3300047321 Ga0495676_0003499 Ga0495676_0003499_11274_12455 392
125 3300047447 Ga0495685_005712 Ga0495685_005712_886_2067 392
126 3300047673 Ga0495593_0016256 Ga0495593_0016256_1259_2440 392
127 3300048089 Ga0495614_0004116 Ga0495614_0004116_847_2028 392
128 3300048905 Ga0496102_0023969 Ga0496102_0023969_1317_2495 392
129 3300048908 Ga0496105_0210136 Ga0496105_0210136_38_1216 392
130 3300048912 Ga0496109_0073661 Ga0496109_0073661_1173_2351 392
131 3300048913 Ga0496110_0196469 Ga0496110_0196469_643_1821 392
132 3300048914 Ga0496111_0191044 Ga0496111_0191044_63_1241 392
133 3300048921 Ga0496118_0046453 Ga0496118_0046453_2090_3268 392
134 3300048923 Ga0496120_0077658 Ga0496120_0077658_95_1273 392
135 3300048927 Ga0496124_0165934 Ga0496124_0165934_400_1578 392
136 3300050492 nmdc:mga0yw44_42267_c1 nmdc:mga0yw44_42267_c1_636_1814 392
137 3300050493 nmdc:mga0k408_67872_c1 nmdc:mga0k408_67872_c1_25_1203 392
138 3300050496 nmdc:mga07m45_4761_c1 nmdc:mga07m45_4761_c1_2867_4045 392
139 3300053077 Ga0495601_0000995 Ga0495601_0000995_3571_4764 392
140 3300053153 Ga0500616_0000305 Ga0500616_0000305_11266_12450 392
141 3300005436 Ga0070713_100072095 Ga0070713_1000720952 393
142 3300005467 Ga0070706_100021693 Ga0070706_1000216939 393
143 3300005981 Ga0081538_10000191 Ga0081538_1000019110 393
144 3300005981 Ga0081538_10002637 Ga0081538_1000263711 393
145 3300006028 Ga0070717_10046024 Ga0070717_100460242 393
146 3300025898 Ga0207692_10037064 Ga0207692_100370642 393
147 3300025928 Ga0207700_10081767 Ga0207700_100817672 393
148 3300025929 Ga0207664_10238923 Ga0207664_102389232 393
149 iso_pu_bacteria 2862382967 2862390856 393
150 iso_pu_bacteria 8008558824 8008560898 393
151 3300005981 Ga0081538_10005820 Ga0081538_1000582013 394
152 3300009094 Ga0111539_10029256 Ga0111539_100292563 394
153 3300009147 Ga0114129_10090493 Ga0114129_100904932 394
154 3300055283 Ga0500661_004827 Ga0500661_004827_226_1416 394
155 3300002077 JGI24744J21845_10002564 JGI24744J21845_100025644 395
156 3300005328 Ga0070676_10065758 Ga0070676_100657582 395
157 3300005334 Ga0068869_100016741 Ga0068869_1000167414 395
158 3300005345 Ga0070692_10039464 Ga0070692_100394642 395
159 3300005347 Ga0070668_100138778 Ga0070668_1001387782 395
160 3300005367 Ga0070667_100080943 Ga0070667_1000809433 395
161 3300005434 Ga0070709_10012716 Ga0070709_100127168 395
162 3300005439 Ga0070711_100010777 Ga0070711_1000107772 395
163 3300005444 Ga0070694_100234918 Ga0070694_1002349181 395
164 3300005457 Ga0070662_100113967 Ga0070662_1001139673 395
165 3300005459 Ga0068867_100038227 Ga0068867_1000382275 395
166 3300005466 Ga0070685_10011581 Ga0070685_100115812 395
167 3300005548 Ga0070665_100121651 Ga0070665_1001216512 395
168 3300005615 Ga0070702_100065506 Ga0070702_1000655063 395
169 3300005718 Ga0068866_10053177 Ga0068866_100531774 395
170 3300005842 Ga0068858_100126123 Ga0068858_1001261233 395
171 3300006051 Ga0075364_10089582 Ga0075364_100895823 395
172 3300006173 Ga0070716_100013395 Ga0070716_1000133952 395
173 3300009094 Ga0111539_10118000 Ga0111539_101180004 395
174 3300009098 Ga0105245_10097901 Ga0105245_100979012 395
175 3300009101 Ga0105247_10052665 Ga0105247_100526654 395
176 3300009545 Ga0105237_10170730 Ga0105237_101707302 395
177 3300013296 Ga0157374_10089182 Ga0157374_100891824 395
178 3300013306 Ga0163162_10056180 Ga0163162_100561805 395
179 3300013307 Ga0157372_10205983 Ga0157372_102059832 395
180 3300014968 Ga0157379_10219204 Ga0157379_102192042 395
181 3300017792 Ga0163161_10061948 Ga0163161_100619483 395
182 3300025901 Ga0207688_10071535 Ga0207688_100715353 395
183 3300025905 Ga0207685_10015789 Ga0207685_100157893 395
184 3300025906 Ga0207699_10048561 Ga0207699_100485611 395
185 3300025914 Ga0207671_10185433 Ga0207671_101854332 395
186 3300025915 Ga0207693_10043448 Ga0207693_100434485 395
187 3300025919 Ga0207657_10089679 Ga0207657_100896791 395
188 3300025927 Ga0207687_10045722 Ga0207687_100457223 395
189 3300025933 Ga0207706_10046562 Ga0207706_100465624 395
190 3300025939 Ga0207665_10001371 Ga0207665_1000137119 395
191 3300025942 Ga0207689_10017228 Ga0207689_100172288 395
192 3300025986 Ga0207658_10103745 Ga0207658_101037453 395
193 3300026041 Ga0207639_10210692 Ga0207639_102106922 395
194 3300026095 Ga0207676_10052456 Ga0207676_100524562 395
195 3300026118 Ga0207675_100048621 Ga0207675_1000486214 395
196 3300026121 Ga0207683_10049259 Ga0207683_100492595 395
197 3300032126 Ga0307415_100042311 Ga0307415_1000423112 395
198 3300037418 Ga0395900_0188766 Ga0395900_0188766_293_1531 395
199 3300038443 Ga0395901_0040823 Ga0395901_0040823_1482_2720 395
200 3300042438 Ga0439459_0017342 Ga0439459_0017342_24_1229 395
201 3300045976 Ga0466967_0412638 Ga0466967_0412638_61_1281 395
202 3300046462 Ga0495651_0005286 Ga0495651_0005286_1985_3196 395
203 3300046472 Ga0495580_0171427 Ga0495580_0171427_106_1308 395
204 3300046476 Ga0495662_0000857 Ga0495662_0000857_9115_10326 395
205 3300046477 Ga0495664_0005512 Ga0495664_0005512_4333_5544 395
206 3300046511 Ga0495608_0015760 Ga0495608_0015760_2999_4210 395
207 3300046514 Ga0495618_0099132 Ga0495618_0099132_264_1475 395
208 3300046516 Ga0495628_0022633 Ga0495628_0022633_341_1552 395
209 3300046517 Ga0495630_0011515 Ga0495630_0011515_4190_5401 395
210 3300046526 Ga0495666_0042801 Ga0495666_0042801_100_1311 395
211 3300046529 Ga0495652_0047527 Ga0495652_0047527_1447_2658 395
212 3300046533 Ga0495640_0002216 Ga0495640_0002216_3029_4240 395
213 3300046535 Ga0495586_0011629 Ga0495586_0011629_1011_2222 395
214 3300046543 Ga0495645_0093010 Ga0495645_0093010_310_1521 395
215 3300046559 Ga0495667_0013529 Ga0495667_0013529_2708_3919 395
216 3300046663 Ga0495635_0047241 Ga0495635_0047241_737_1948 395
217 3300046675 Ga0495657_0014717 Ga0495657_0014717_1774_2985 395
218 3300046678 Ga0495599_0033028 Ga0495599_0033028_1408_2619 395
219 3300046680 Ga0495646_0024386 Ga0495646_0024386_1319_2530 395
220 3300046809 Ga0495600_0024490 Ga0495600_0024490_1408_2619 395
221 3300047315 Ga0495581_0012462 Ga0495581_0012462_991_2202 395
222 3300047317 Ga0495604_0001684 Ga0495604_0001684_5697_6908 395
223 3300047319 Ga0495674_0089478 Ga0495674_0089478_228_1439 395
224 3300047444 Ga0495675_0039833 Ga0495675_0039833_32_1243 395
225 3300048088 Ga0495602_0053997 Ga0495602_0053997_1319_2530 395
226 3300048908 Ga0496105_0030414 Ga0496105_0030414_2946_4133 395
227 3300048909 Ga0496106_0034974 Ga0496106_0034974_12_1199 395
228 3300048911 Ga0496108_0002944 Ga0496108_0002944_5007_6194 395
229 3300048912 Ga0496109_0018219 Ga0496109_0018219_1226_2413 395
230 3300048913 Ga0496110_0070282 Ga0496110_0070282_387_1574 395
231 3300048915 Ga0496112_0169711 Ga0496112_0169711_22_1209 395
232 3300048918 Ga0496115_0090946 Ga0496115_0090946_551_1738 395
233 3300050491 nmdc:mga00v17_8042_c1 nmdc:mga00v17_8042_c1_3889_5079 395
234 3300050507 nmdc:mga05p37_339701_c1 nmdc:mga05p37_339701_c1_291_1523 395
235 3300050509 nmdc:mga0qj67_30053_c1 nmdc:mga0qj67_30053_c1_2009_3202 395
236 3300050511 nmdc:mga08y16_153708_c1 nmdc:mga08y16_153708_c1_701_1891 395
237 3300053077 Ga0495601_0030704 Ga0495601_0030704_319_1530 395

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00266

Aminotran_5

Aminotransferase class-V

17

367

0.89

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

62

198

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
7cep-assembly1.cif.gz_A crystal structure of l-cycloserine-bound form of cysteine desulfurase sufs from bacillus subtilis 0.9293 4 394
5b87-assembly1.cif.gz_A crystal structure of a cysteine desulfurase from thermococcus onnurineus na1 in complex with alanine at 2.3 angstrom resolution 0.9261 4 394
5b7s-assembly1.cif.gz_A apo structure of cysteine desulfurase from thermococcus onnurineus na1 0.9258 7 392
1t3i-assembly1.cif.gz_B structure of slr0077/sufs, the essential cysteine desulfurase from synechocystis pcc 6803 0.9247 6 394
6o11-assembly1.cif.gz_A-2 e. coli cysteine desulfurase sufs c364a with a cys-aldimine intermediate 0.9242 4 394
ID Description Score Start End Superfamily
5j8qA01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9203 286 394 3.90.1150.10
af_Q10089_37_288_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.92 34 278 3.40.640.10
4w91I01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9187 286 394 3.90.1150.10
1elqB02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9186 32 284 3.40.640.10
af_Q46925_288_391_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9092 283 386 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A3B9ANA2-F1-model_v4 Aminotransferase 0.9761 19 345 GO:0008483
AF-A0A2P5LPW9-F1-model_v4 Aminotransferase 0.9758 4 393 GO:0008483
AF-A0A813IL10-F1-model_v4 Aminotransferase class V domain-containing protein 0.973 4 394
AF-A0A7R9TUF4-F1-model_v4 Aminotransferase class V domain-containing protein 0.9712 6 390
AF-A0A7J7QDJ0-F1-model_v4 Aminotransferase class V 0.9692 1 394 GO:0008483

Feature Viewer

pLDDT pTM Quality
94.19 0.93 High
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Predicted Structure (AlphaFold2)

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