F349581

General Info

Members Datasets Scaffolds Average Seq Length
236 150 472 340

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2946045630|2946045748
Length 394
Sequence ERGRTVTQVDSAGTAQGDVDSAGAAQGDVDSAGTAQGDVDSAGTAQGDAGPPDSGPGDTGPRHTGPRRTGARTGPWKRGRVLAVVALLLGLFMLLHASIPNRVGNLGSLVETFLPWFGLFIPVLLAGALLRRSVLAVVALLLPAVVWLNLFGGLLTDKSHPGGELTVVSHNVGADNPDAVGTARALAASGADVLALEELDPGALGTYEKELAAAYPHHTVLGTVGVWSKLPLSDTRTVDVKMDAGPLGDAKPADVKLEYNRGLRTTVATDHGPLAVYVAHLGSVRVNPRAGLSSGQRDAGAQALGRAVAAERNERVVLLGDLNGTVDDRAYKGVTSRMRSAQEAAGDGFGFSWPATFPVVRIDQILVRGVEPESSWVLPATGSDHLPVAARISW

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
5 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
6 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
7 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
8 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
9 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
10 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
11 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
12 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
13 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
14 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
15 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
16 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
17 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
25 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
26 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
27 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
28 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
29 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
30 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
31 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
32 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
33 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
34 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
35 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
36 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
37 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
38 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
39 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
40 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
41 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
42 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
43 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
44 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
45 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
46 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
47 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
48 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
49 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
50 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
51 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
52 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
53 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
54 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
55 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
56 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
57 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
58 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
59 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
60 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
61 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
62 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
63 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
64 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
65 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
66 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
67 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
68 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
69 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
70 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
71 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
72 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
73 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
74 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
75 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
76 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
77 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
78 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
79 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
80 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
81 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
82 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
83 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
84 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
85 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
86 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
87 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
88 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
89 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
90 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
91 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
92 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
93 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
94 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
95 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
96 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
97 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
98 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
99 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
100 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
101 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
102 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
103 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
112 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
114 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
115 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
116 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
117 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
118 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
119 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
120 2643221578 Streptomyces sp. Root63 Isolate Unclassified
121 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
122 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
123 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
124 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
125 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
126 2808606448 Streptomyces sp. 193411 Isolate Unclassified
127 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
128 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
129 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
130 2862574272 Streptomyces sp. AcE210 Isolate Nodule
131 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
132 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
133 2867369537 Streptomyces sp. Z26 Isolate Unclassified
134 2867428634 Streptomyces sp. RP5T Isolate Unclassified
135 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
136 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
137 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
138 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
139 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
140 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
141 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
142 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
143 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
144 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
145 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
146 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
147 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
148 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
149 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
150 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 83.9
Metatranscriptomes 0
Isolates 16.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.12
Nodule 0.85
Rhizoplane 1.27
Rhizosphere 80.08
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10032503 3300003320 Bacteria 5451
2 Ga0070668_100003493 3300005347 Bacteria 11589
3 Ga0070714_100006294 3300005435 Bacteria 9151
4 Ga0070714_100080349 3300005435 Bacteria 2837
5 Ga0070714_100500454 3300005435 Bacteria 1159
6 Ga0070713_100010969 3300005436 Bacteria 6572
7 Ga0070713_100128414 3300005436 Bacteria 2233
8 Ga0070710_10095782 3300005437 Bacteria 1758
9 Ga0070711_100100265 3300005439 Bacteria 2105
10 Ga0070663_100037656 3300005455 Bacteria 3369
11 Ga0068856_100094276 3300005614 Bacteria 2980
12 Ga0081455_10059797 3300005937 Bacteria 3215
13 Ga0070717_10090269 3300006028 Bacteria 2585
14 Ga0075368_10005646 3300006042 Bacteria 4318
15 Ga0070712_100136406 3300006175 Bacteria 1866
16 Ga0075367_10003696 3300006178 Bacteria 7349
17 Ga0105246_10084370 3300011119 Bacteria 2273
18 Ga0183367_1012 3300015688 Bacteria 347438
19 Ga0207426_1016976 3300025302 Bacteria 2598
20 Ga0207693_10066641 3300025915 Bacteria 2819
21 Ga0207663_10007070 3300025916 Bacteria 5795
22 Ga0207700_10030749 3300025928 Bacteria 3807
23 Ga0207700_10034942 3300025928 Bacteria 3614
24 Ga0207700_10207964 3300025928 Bacteria 1653
25 Ga0207664_10004047 3300025929 Bacteria 9881
26 Ga0207664_10008045 3300025929 Bacteria 7330
27 Ga0207664_10125599 3300025929 Bacteria 2153
28 Ga0207664_10192278 3300025929 Bacteria 1757
29 Ga0207664_10204779 3300025929 Bacteria 1705
30 Ga0207665_10003429 3300025939 Bacteria 10606
31 Ga0207678_10000234 3300026067 Bacteria 49814
32 Ga0207641_10459510 3300026088 Bacteria 1232
33 Ga0209813_10011856 3300027866 Bacteria 2288
34 Ga0307517_10013168 3300028786 Bacteria 11262
35 Ga0307515_10003815 3300028794 Bacteria 31511
36 Ga0307515_10022628 3300028794 Bacteria 11065
37 Ga0307515_10102314 3300028794 Bacteria 3447
38 Ga0307511_10013725 3300030521 Bacteria 7903
39 Ga0307512_10021387 3300030522 Bacteria 5833
40 Ga0307509_10074804 3300031507 Bacteria 3521
41 Ga0307509_10090491 3300031507 Bacteria 3136
42 Ga0307509_10197936 3300031507 Bacteria 1850
43 Ga0307508_10062433 3300031616 Bacteria 3289
44 Ga0307518_10088830 3300031838 Bacteria 2225
45 Ga0307518_10181905 3300031838 Bacteria 1420
46 Ga0307410_10035946 3300031852 Bacteria 3222
47 Ga0307507_10069547 3300033179 Bacteria 3202
48 Ga0307510_10047809 3300033180 Bacteria 4576
49 Ga0373944_0001457 3300035089 Bacteria 5977
50 Ga0373936_0006265 3300035113 Bacteria 4487
51 Ga0373936_0022690 3300035113 Bacteria 2443
52 Ga0373945_0001627 3300035116 Bacteria 6884
53 Ga0373956_0070306 3300035119 Bacteria 1597
54 Ga0373957_0116196 3300035120 Bacteria 1080
55 Ga0373943_0001660 3300035170 Bacteria 10105
56 Ga0373946_0001865 3300035171 Bacteria 7361
57 Ga0373935_0010841 3300035692 Bacteria 5474
58 Ga0373927_0011637 3300035695 Bacteria 5855
59 Ga0373937_0215590 3300036401 Bacteria 1806
60 Ga0373937_0393294 3300036401 Bacteria 1315
61 Ga0373925_0004642 3300037068 Bacteria 10374
62 Ga0373925_0033403 3300037068 Bacteria 3791
63 Ga0395898_0010336 3300037466 Bacteria 9763
64 Ga0451837_0424425 3300041494 Bacteria 3779
65 Ga0466972_0000507 3300044658 Bacteria 19436
66 Ga0466972_0032851 3300044658 Bacteria 2547
67 Ga0466961_0125150 3300044693 Bacteria 1613
68 Ga0495592_0062764 3300046454 Bacteria 2726
69 Ga0495603_0001645 3300046455 Bacteria 13102
70 Ga0495603_0002203 3300046455 Bacteria 11468
71 Ga0495603_0005772 3300046455 Bacteria 7405
72 Ga0495629_0001228 3300046459 Bacteria 20123
73 Ga0495629_0003510 3300046459 Bacteria 11854
74 Ga0495629_0007087 3300046459 Bacteria 8261
75 Ga0495629_0140543 3300046459 Bacteria 1680
76 Ga0495638_0042693 3300046460 Bacteria 2864
77 Ga0495638_0103468 3300046460 Bacteria 1700
78 Ga0495638_0185497 3300046460 Bacteria 1184
79 Ga0495641_0007208 3300046461 Bacteria 7001
80 Ga0495651_0007427 3300046462 Bacteria 8380
81 Ga0495651_0023422 3300046462 Bacteria 4800
82 Ga0495651_0036603 3300046462 Bacteria 3821
83 Ga0495653_0003129 3300046463 Bacteria 13262
84 Ga0495653_0016549 3300046463 Bacteria 6001
85 Ga0495582_0090949 3300046473 Bacteria 1702
86 Ga0495662_0000472 3300046476 Bacteria 18256
87 Ga0495662_0000487 3300046476 Bacteria 18092
88 Ga0495662_0005157 3300046476 Bacteria 6549
89 Ga0495662_0016841 3300046476 Bacteria 3537
90 Ga0495664_0000539 3300046477 Bacteria 19049
91 Ga0495664_0001674 3300046477 Bacteria 11779
92 Ga0495664_0059256 3300046477 Bacteria 2278
93 Ga0495594_0002036 3300046499 Bacteria 10525
94 Ga0495594_0060741 3300046499 Bacteria 2091
95 Ga0495606_0054613 3300046507 Bacteria 2586
96 Ga0495608_0006682 3300046511 Bacteria 8180
97 Ga0495608_0104891 3300046511 Bacteria 1820
98 Ga0495618_0034106 3300046514 Bacteria 3191
99 Ga0495618_0062318 3300046514 Bacteria 2366
100 Ga0495618_0171660 3300046514 Bacteria 1380
101 Ga0495628_0001141 3300046516 Bacteria 24202
102 Ga0495628_0028785 3300046516 Bacteria 4512
103 Ga0495630_0006942 3300046517 Bacteria 8070
104 Ga0495630_0011093 3300046517 Bacteria 6518
105 Ga0495666_0001499 3300046526 Bacteria 11413
106 Ga0495652_0076413 3300046529 Bacteria 2778
107 Ga0495652_0085750 3300046529 Bacteria 2587
108 Ga0495640_0014435 3300046533 Bacteria 5978
109 Ga0495586_0026403 3300046535 Bacteria 3108
110 Ga0495586_0048524 3300046535 Bacteria 2294
111 Ga0495622_0015113 3300046557 Bacteria 3589
112 Ga0495667_0064656 3300046559 Bacteria 2392
113 Ga0495667_0115581 3300046559 Bacteria 1733
114 Ga0495668_0000410 3300046616 Bacteria 55937
115 Ga0495634_0017903 3300046642 Bacteria 5049
116 Ga0495634_0114962 3300046642 Bacteria 1727
117 Ga0495625_0001417 3300046660 Bacteria 29317
118 Ga0495625_0003879 3300046660 Bacteria 14437
119 Ga0495625_0036988 3300046660 Bacteria 3584
120 Ga0495635_0005794 3300046663 Bacteria 8607
121 Ga0495635_0006991 3300046663 Bacteria 7883
122 Ga0495635_0030888 3300046663 Bacteria 3721
123 Ga0495588_0018326 3300046674 Bacteria 3412
124 Ga0495588_0048549 3300046674 Bacteria 2181
125 Ga0495657_0004846 3300046675 Bacteria 10727
126 Ga0495657_0038639 3300046675 Bacteria 3283
127 Ga0495657_0038970 3300046675 Bacteria 3267
128 Ga0495657_0065360 3300046675 Bacteria 2392
129 Ga0495657_0071248 3300046675 Bacteria 2269
130 Ga0495599_0041449 3300046678 Bacteria 2890
131 Ga0495599_0054527 3300046678 Bacteria 2504
132 Ga0495599_0081946 3300046678 Bacteria 2015
133 Ga0495623_0032285 3300046679 Bacteria 3365
134 Ga0495623_0051194 3300046679 Bacteria 2613
135 Ga0495646_0002272 3300046680 Bacteria 11755
136 Ga0495613_0004880 3300046689 Bacteria 10070
137 Ga0495613_0007468 3300046689 Bacteria 8142
138 Ga0495613_0011080 3300046689 Bacteria 6694
139 Ga0495613_0042859 3300046689 Bacteria 3347
140 Ga0495624_0022157 3300046690 Bacteria 4204
141 Ga0495670_0049815 3300046691 Bacteria 2096
142 Ga0495589_0001179 3300046794 Bacteria 15570
143 Ga0495589_0011550 3300046794 Bacteria 4585
144 Ga0495600_0003668 3300046809 Bacteria 9066
145 Ga0495581_0007487 3300047315 Bacteria 6314
146 Ga0495581_0056900 3300047315 Bacteria 2257
147 Ga0495604_0000590 3300047317 Bacteria 31463
148 Ga0495604_0001866 3300047317 Bacteria 17162
149 Ga0495604_0029354 3300047317 Bacteria 4374
150 Ga0495636_0022493 3300047318 Bacteria 2548
151 Ga0495674_0012928 3300047319 Bacteria 7860
152 Ga0495674_0015951 3300047319 Bacteria 7013
153 Ga0495676_0000233 3300047321 Bacteria 44485
154 Ga0495676_0004054 3300047321 Bacteria 13340
155 Ga0495676_0005683 3300047321 Bacteria 11432
156 Ga0495676_0083312 3300047321 Bacteria 2417
157 Ga0495676_0110506 3300047321 Bacteria 2017
158 Ga0495676_0182543 3300047321 Bacteria 1469
159 Ga0495680_0054482 3300047322 Bacteria 3105
160 Ga0495680_0108117 3300047322 Bacteria 2064
161 Ga0495680_0194250 3300047322 Bacteria 1459
162 Ga0495687_015645 3300047443 Bacteria 3850
163 Ga0495675_0026615 3300047444 Bacteria 3688
164 Ga0495675_0034262 3300047444 Bacteria 3241
165 Ga0495675_0036472 3300047444 Bacteria 3136
166 Ga0495685_007349 3300047447 Bacteria 3634
167 Ga0495685_007788 3300047447 Bacteria 3544
168 Ga0495685_033716 3300047447 Bacteria 1759
169 Ga0495685_039270 3300047447 Bacteria 1620
170 Ga0495681_0001814 3300047470 Bacteria 15705
171 Ga0495684_0010409 3300047471 Bacteria 7193
172 Ga0495684_0012060 3300047471 Bacteria 6666
173 Ga0495684_0066764 3300047471 Bacteria 2735
174 Ga0495593_0001986 3300047673 Bacteria 12195
175 Ga0495593_0111740 3300047673 Bacteria 1395
176 Ga0495602_0012133 3300048088 Bacteria 8877
177 Ga0495602_0200848 3300048088 Bacteria 1521
178 Ga0495614_0000785 3300048089 Bacteria 13455
179 Ga0495614_0008164 3300048089 Bacteria 4654
180 Ga0495626_0000025 3300048091 Bacteria 209356
181 Ga0496108_0302880 3300048911 Bacteria 1392
182 Ga0496109_0020621 3300048912 Bacteria 5823
183 Ga0501031_0321626 3300049568 Bacteria 1002
184 Ga0501033_0001763 3300049570 Bacteria 18925
185 Ga0501033_0002536 3300049570 Bacteria 15460
186 Ga0501033_0048703 3300049570 Bacteria 3147
187 Ga0501036_0129894 3300049572 Bacteria 2127
188 Ga0501037_0084060 3300049573 Bacteria 2305
189 Ga0501043_0084322 3300049579 Bacteria 2497
190 Ga0501046_0052122 3300049580 Bacteria 3225
191 Ga0501047_0175537 3300049581 Bacteria 2010
192 Ga0501047_0376316 3300049581 Bacteria 1255
193 Ga0501048_0006303 3300049582 Bacteria 9019
194 Ga0501070_0332352 3300049586 Bacteria 1235
195 Ga0501035_0220259 3300049822 Bacteria 1620
196 Ga0501044_0161355 3300049823 Bacteria 2218
197 Ga0500610_0129909 3300053079 Bacteria 1282
198 Ga0466962_0008934 3300061719 Bacteria 4801
199 2946045748 2946045630 Bacteria 8527308
200 2547407680 2547132111 Bacteria 8013147
201 2547412730 2547132111 Bacteria 8013147
202 2554256503 2554235005 Bacteria 6457341
203 2585302317 2582581312 Bacteria 7308206
204 2643898176 2643221578 Bacteria 9213798
205 2643899642 2643221578 Bacteria 9213798
206 2644409321 2643221673 Bacteria 9196637
207 2644410180 2643221673 Bacteria 9196637
208 2644441617 2643221678 Bacteria 9540101
209 2768644414 2767802112 Bacteria 6465194
210 2784587530 2784132148 Bacteria 8627943
211 2808849180 2808606359 Bacteria 9866990
212 2809231094 2808606448 Bacteria 8656184
213 2812482845 2811994917 Bacteria 7761064
214 2819695399 2818991463 Bacteria 7948711
215 2861521759 2861520306 Bacteria 8348283
216 2862580934 2862574272 Bacteria 10567477
217 2862709877 2862705112 Bacteria 6563286
218 2867347457 2867346516 Bacteria 7608576
219 2867370755 2867369537 Bacteria 6501581
220 2867432090 2867428634 Bacteria 9590268
221 2887478945 2887478801 Bacteria 8972725
222 2954006724 2954002825 Bacteria 9173742
223 2966601640 2966598605 Bacteria 7676064
224 2990049512 2990044586 Bacteria 6603797
225 2990066494 2990059506 Bacteria 9321252
226 8003321318 8003314358 Bacteria 10575343
227 8008489405 8008485437 Bacteria 7198341
228 8008563298 8008558824 Bacteria 10610750
229 8023628623 8023623736 Bacteria 8593882
230 8025529019 8025524527 Bacteria 7197316
231 8025533860 8025530807 Bacteria 8495698
232 8047903607 8047893842 Bacteria 11723082
233 8048356871 8048356638 Bacteria 11044339
234 8048378955 8048369669 Bacteria 11666822
235 8048388060 8048379754 Bacteria 11877923
236 8055070945 8055066027 Bacteria 9479577
237 rootH2_10032503
238 Ga0070668_100003493
239 Ga0070714_100006294
240 Ga0070714_100080349
241 Ga0070714_100500454
242 Ga0070713_100010969
243 Ga0070713_100128414
244 Ga0070710_10095782
245 Ga0070711_100100265
246 Ga0070663_100037656
247 Ga0068856_100094276
248 Ga0081455_10059797
249 Ga0070717_10090269
250 Ga0075368_10005646
251 Ga0070712_100136406
252 Ga0075367_10003696
253 Ga0105246_10084370
254 Ga0183367_1012
255 Ga0207426_1016976
256 Ga0207693_10066641
257 Ga0207663_10007070
258 Ga0207700_10030749
259 Ga0207700_10034942
260 Ga0207700_10207964
261 Ga0207664_10004047
262 Ga0207664_10008045
263 Ga0207664_10125599
264 Ga0207664_10192278
265 Ga0207664_10204779
266 Ga0207665_10003429
267 Ga0207678_10000234
268 Ga0207641_10459510
269 Ga0209813_10011856
270 Ga0307517_10013168
271 Ga0307515_10003815
272 Ga0307515_10022628
273 Ga0307515_10102314
274 Ga0307511_10013725
275 Ga0307512_10021387
276 Ga0307509_10074804
277 Ga0307509_10090491
278 Ga0307509_10197936
279 Ga0307508_10062433
280 Ga0307518_10088830
281 Ga0307518_10181905
282 Ga0307410_10035946
283 Ga0307507_10069547
284 Ga0307510_10047809
285 Ga0373944_0001457
286 Ga0373936_0006265
287 Ga0373936_0022690
288 Ga0373945_0001627
289 Ga0373956_0070306
290 Ga0373957_0116196
291 Ga0373943_0001660
292 Ga0373946_0001865
293 Ga0373935_0010841
294 Ga0373927_0011637
295 Ga0373937_0215590
296 Ga0373937_0393294
297 Ga0373925_0004642
298 Ga0373925_0033403
299 Ga0395898_0010336
300 Ga0451837_0424425
301 Ga0466972_0000507
302 Ga0466972_0032851
303 Ga0466961_0125150
304 Ga0495592_0062764
305 Ga0495603_0001645
306 Ga0495603_0002203
307 Ga0495603_0005772
308 Ga0495629_0001228
309 Ga0495629_0003510
310 Ga0495629_0007087
311 Ga0495629_0140543
312 Ga0495638_0042693
313 Ga0495638_0103468
314 Ga0495638_0185497
315 Ga0495641_0007208
316 Ga0495651_0007427
317 Ga0495651_0023422
318 Ga0495651_0036603
319 Ga0495653_0003129
320 Ga0495653_0016549
321 Ga0495582_0090949
322 Ga0495662_0000472
323 Ga0495662_0000487
324 Ga0495662_0005157
325 Ga0495662_0016841
326 Ga0495664_0000539
327 Ga0495664_0001674
328 Ga0495664_0059256
329 Ga0495594_0002036
330 Ga0495594_0060741
331 Ga0495606_0054613
332 Ga0495608_0006682
333 Ga0495608_0104891
334 Ga0495618_0034106
335 Ga0495618_0062318
336 Ga0495618_0171660
337 Ga0495628_0001141
338 Ga0495628_0028785
339 Ga0495630_0006942
340 Ga0495630_0011093
341 Ga0495666_0001499
342 Ga0495652_0076413
343 Ga0495652_0085750
344 Ga0495640_0014435
345 Ga0495586_0026403
346 Ga0495586_0048524
347 Ga0495622_0015113
348 Ga0495667_0064656
349 Ga0495667_0115581
350 Ga0495668_0000410
351 Ga0495634_0017903
352 Ga0495634_0114962
353 Ga0495625_0001417
354 Ga0495625_0003879
355 Ga0495625_0036988
356 Ga0495635_0005794
357 Ga0495635_0006991
358 Ga0495635_0030888
359 Ga0495588_0018326
360 Ga0495588_0048549
361 Ga0495657_0004846
362 Ga0495657_0038639
363 Ga0495657_0038970
364 Ga0495657_0065360
365 Ga0495657_0071248
366 Ga0495599_0041449
367 Ga0495599_0054527
368 Ga0495599_0081946
369 Ga0495623_0032285
370 Ga0495623_0051194
371 Ga0495646_0002272
372 Ga0495613_0004880
373 Ga0495613_0007468
374 Ga0495613_0011080
375 Ga0495613_0042859
376 Ga0495624_0022157
377 Ga0495670_0049815
378 Ga0495589_0001179
379 Ga0495589_0011550
380 Ga0495600_0003668
381 Ga0495581_0007487
382 Ga0495581_0056900
383 Ga0495604_0000590
384 Ga0495604_0001866
385 Ga0495604_0029354
386 Ga0495636_0022493
387 Ga0495674_0012928
388 Ga0495674_0015951
389 Ga0495676_0000233
390 Ga0495676_0004054
391 Ga0495676_0005683
392 Ga0495676_0083312
393 Ga0495676_0110506
394 Ga0495676_0182543
395 Ga0495680_0054482
396 Ga0495680_0108117
397 Ga0495680_0194250
398 Ga0495687_015645
399 Ga0495675_0026615
400 Ga0495675_0034262
401 Ga0495675_0036472
402 Ga0495685_007349
403 Ga0495685_007788
404 Ga0495685_033716
405 Ga0495685_039270
406 Ga0495681_0001814
407 Ga0495684_0010409
408 Ga0495684_0012060
409 Ga0495684_0066764
410 Ga0495593_0001986
411 Ga0495593_0111740
412 Ga0495602_0012133
413 Ga0495602_0200848
414 Ga0495614_0000785
415 Ga0495614_0008164
416 Ga0495626_0000025
417 Ga0496108_0302880
418 Ga0496109_0020621
419 Ga0501031_0321626
420 Ga0501033_0001763
421 Ga0501033_0002536
422 Ga0501033_0048703
423 Ga0501036_0129894
424 Ga0501037_0084060
425 Ga0501043_0084322
426 Ga0501046_0052122
427 Ga0501047_0175537
428 Ga0501047_0376316
429 Ga0501048_0006303
430 Ga0501070_0332352
431 Ga0501035_0220259
432 Ga0501044_0161355
433 Ga0500610_0129909
434 Ga0466962_0008934
435 2946045748
436 2547407680
437 2547412730
438 2554256503
439 2585302317
440 2643898176
441 2643899642
442 2644409321
443 2644410180
444 2644441617
445 2768644414
446 2784587530
447 2808849180
448 2809231094
449 2812482845
450 2819695399
451 2861521759
452 2862580934
453 2862709877
454 2867347457
455 2867370755
456 2867432090
457 2887478945
458 2954006724
459 2966601640
460 2990049512
461 2990066494
462 8003321318
463 8008489405
464 8008563298
465 8023628623
466 8025529019
467 8025533860
468 8047903607
469 8048356871
470 8048378955
471 8048388060
472 8055070945

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03372

Exo_endo_phos

Endonuclease/Exonuclease/phosphatase family

168

385

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
8j2f-assembly1.cif.gz_B human neutral shpingomyelinase 0.7757 149 376
3l1w-assembly2.cif.gz_D the crystal structure of a functionally unknown conserved protein from enterococcus faecalis v583 0.7671 149 378
4fpv-assembly1.cif.gz_A crystal structure of d. rerio tdp2 complexed with single strand dna product 0.7658 149 378
4gyz-assembly4.cif.gz_D mus musculus tdp2 bound to damp and mg2+ 0.7636 149 377
5j3p-assembly2.cif.gz_B crystal structure of the catalytic domain of human tyrosyl dna phosphodiesterase 2 0.7609 149 376
ID Description Score Start End Superfamily
af_P40015_32_343_3.60.10.10 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.8111 145 378 3.60.10.10
af_Q9VZS6_4_270_3.60.10.10 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.7972 148 375 3.60.10.10
af_O45870_32_323_3.60.10.10 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.7926 146 374 3.60.10.10
af_O74369_2_297_3.60.10.10 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.7897 145 377 3.60.10.10
af_O60906_6_279_3.60.10.10 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.7666 149 374 3.60.10.10
ID Description Score Start End GO Terms
AF-A0A2N3TMX3-F1-model_v4 deleted 0.9893 278 376
AF-A0A0M2S8Z0-F1-model_v4 Membrane protein 0.9878 67 378 GO:0003824
GO:0016020
AF-A0A7Z0Q2A0-F1-model_v4 Endonuclease/exonuclease/phosphatase family protein 0.9874 135 378 GO:0004519
GO:0004527
AF-A0A6G3SIE8-F1-model_v4 Endonuclease/exonuclease/phosphatase domain-containing protein 0.9871 67 378 GO:0003824
GO:0016020
AF-A0A387HHW6-F1-model_v4 Endonuclease/exonuclease/phosphatase domain-containing protein 0.9857 67 378 GO:0003824
GO:0016020

Map