F349025

General Info

Members Datasets Scaffolds Average Seq Length
236 137 472 324

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10056632|Ga0111539_100566322
Length 364
Sequence MYQRFYNLEEMPFELTPDPKYLYLSRQHREALSNLEYGLLSARGITVLLGEAGTGKTTLLHAMLASHRCRNVNCVFISNPALTRAEFYEMLAQRFSLGGRAGRSKAVLLTELEALLRERRISGFQTALVIDEAQSLSAELLEEIRLLANTETSTQKLLPLVLVGQPELRDRLNTPRLRQLKQRVTLRCEITPFTLAETSDYIGSRVRIAGGDATALFTRDAVSLIHERSRGIPRTISVLCDNALLTGCGLGRQPVTRAVVLEVASDFDLPGAVQPSPPADLGTDHWAAQSPPVVDRTPGPPAPLIADQVVGVLSDAFRWSVRKARTLYTSTVNPPNPLGPGSLGPSTPGDEPVWHGGSAPRRQI

Samples

Sample ID Description Type Environment
1 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
89 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
93 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
94 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
95 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
96 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
97 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
98 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
99 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
100 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
101 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
102 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
103 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
104 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
105 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
106 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
107 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
108 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
109 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
110 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
111 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
112 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
113 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
114 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
115 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
116 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
117 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
118 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
119 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
120 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
125 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
126 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
127 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
128 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
129 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
130 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
131 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
132 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
133 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
134 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
135 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
136 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
137 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.27
Rhizosphere 98.73
Stem 0
Stem Tuber 0
Unclassified 24.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0111539_10056632 3300009094 Bacteria 4658
2 Ga0070658_10027319 3300005327 Unclassified 4581
3 Ga0070690_100010018 3300005330 Bacteria 5503
4 Ga0070670_100030698 3300005331 Unclassified 4628
5 Ga0070677_10000224 3300005333 Bacteria 19512
6 Ga0070677_10059897 3300005333 Unclassified 1567
7 Ga0070666_10236766 3300005335 Bacteria 1290
8 Ga0070682_100103319 3300005337 Bacteria 1885
9 Ga0070689_100020278 3300005340 Bacteria 4931
10 Ga0070669_100009793 3300005353 Bacteria 6826
11 Ga0070669_100016784 3300005353 Bacteria 5225
12 Ga0070675_100002656 3300005354 Bacteria 13439
13 Ga0070675_100003443 3300005354 Bacteria 11986
14 Ga0070675_100084615 3300005354 Bacteria 2649
15 Ga0070675_100119627 3300005354 Bacteria 2237
16 Ga0070671_100021876 3300005355 Bacteria 5223
17 Ga0070671_100255358 3300005355 Unclassified 1489
18 Ga0070674_100000066 3300005356 Bacteria 47605
19 Ga0070674_100064388 3300005356 Unclassified 2569
20 Ga0070673_100008436 3300005364 Bacteria 6852
21 Ga0070673_100052892 3300005364 Unclassified 3188
22 Ga0070673_100444361 3300005364 Bacteria 1166
23 Ga0070688_100005237 3300005365 Bacteria 6815
24 Ga0070667_100009415 3300005367 Bacteria 8103
25 Ga0070667_100362549 3300005367 Bacteria 1314
26 Ga0070713_100046506 3300005436 Bacteria 3561
27 Ga0070710_10039105 3300005437 Unclassified 2609
28 Ga0070701_10203692 3300005438 Bacteria 1171
29 Ga0068867_100017070 3300005459 Bacteria 5157
30 Ga0068867_100040647 3300005459 Unclassified 3396
31 Ga0070685_10199271 3300005466 Unclassified 1300
32 Ga0070698_100012728 3300005471 Bacteria 8908
33 Ga0070698_100488733 3300005471 Unclassified 1168
34 Ga0070699_100047963 3300005518 Bacteria 3696
35 Ga0070697_100039943 3300005536 Bacteria 3795
36 Ga0070672_100014106 3300005543 Bacteria 5656
37 Ga0070672_100037735 3300005543 Bacteria 3688
38 Ga0070695_100058148 3300005545 Bacteria 2500
39 Ga0070665_100008401 3300005548 Bacteria 10445
40 Ga0070665_100137182 3300005548 Bacteria 2449
41 Ga0070664_100011885 3300005564 Bacteria 7067
42 Ga0068859_100081942 3300005617 Bacteria 3269
43 Ga0068859_100302137 3300005617 Bacteria 1694
44 Ga0068864_100216074 3300005618 Bacteria 1767
45 Ga0068863_100060438 3300005841 Bacteria 3584
46 Ga0068858_100061672 3300005842 Bacteria 3466
47 Ga0068858_100069017 3300005842 Unclassified 3276
48 Ga0068858_100134298 3300005842 Unclassified 2321
49 Ga0068858_100141332 3300005842 Unclassified 2260
50 Ga0068860_100015270 3300005843 Bacteria 7499
51 Ga0068860_100183051 3300005843 Unclassified 2025
52 Ga0068862_100022885 3300005844 Bacteria 5231
53 Ga0081455_10041120 3300005937 Unclassified 4070
54 Ga0070712_100018924 3300006175 Unclassified 4482
55 Ga0097621_100006017 3300006237 Bacteria 8577
56 Ga0097621_100240573 3300006237 Bacteria 1582
57 Ga0068871_100157465 3300006358 Bacteria 1940
58 Ga0075428_100000809 3300006844 Bacteria 32693
59 Ga0075428_100087584 3300006844 Bacteria 3396
60 Ga0075428_100225644 3300006844 Unclassified 2022
61 Ga0075430_100002275 3300006846 Bacteria 15900
62 Ga0075430_100137487 3300006846 Bacteria 2035
63 Ga0075431_100011839 3300006847 Bacteria 8801
64 Ga0075431_100037194 3300006847 Bacteria 5017
65 Ga0075431_100072205 3300006847 Bacteria 3561
66 Ga0075431_100142801 3300006847 Bacteria 2468
67 Ga0075431_100272694 3300006847 Unclassified 1714
68 Ga0075433_10046014 3300006852 Bacteria 3794
69 Ga0075433_10090102 3300006852 Bacteria 2711
70 Ga0075433_10099066 3300006852 Bacteria 2580
71 Ga0075434_100007347 3300006871 Bacteria 10197
72 Ga0075429_100008996 3300006880 Bacteria 8674
73 Ga0075429_100042880 3300006880 Bacteria 3936
74 Ga0075429_100063765 3300006880 Bacteria 3210
75 Ga0075429_100064557 3300006880 Bacteria 3188
76 Ga0075436_100002534 3300006914 Bacteria 12573
77 Ga0097620_100081941 3300006931 Bacteria 3269
78 Ga0097620_100302172 3300006931 Bacteria 1694
79 Ga0075435_100022712 3300007076 Unclassified 4842
80 Ga0075435_100038834 3300007076 Bacteria 3797
81 Ga0075435_100134503 3300007076 Unclassified 2070
82 Ga0111539_10004532 3300009094 Bacteria 18165
83 Ga0111539_10009188 3300009094 Bacteria 12495
84 Ga0111539_10010338 3300009094 Bacteria 11749
85 Ga0111539_10021159 3300009094 Bacteria 8010
86 Ga0111539_10091813 3300009094 Unclassified 3567
87 Ga0111539_10135765 3300009094 Bacteria 2881
88 Ga0105245_10155418 3300009098 Bacteria 2166
89 Ga0114129_10001194 3300009147 Bacteria 34510
90 Ga0114129_10007467 3300009147 Bacteria 15573
91 Ga0114129_10010101 3300009147 Bacteria 13458
92 Ga0114129_10014791 3300009147 Bacteria 11117
93 Ga0114129_10030152 3300009147 Bacteria 7682
94 Ga0114129_10034614 3300009147 Bacteria 7135
95 Ga0114129_10039432 3300009147 Bacteria 6659
96 Ga0114129_10080311 3300009147 Bacteria 4533
97 Ga0114129_10115115 3300009147 Bacteria 3707
98 Ga0114129_10508831 3300009147 Bacteria 1572
99 Ga0114129_10633376 3300009147 Unclassified 1382
100 Ga0105241_10166320 3300009174 Bacteria 1818
101 Ga0105242_10232356 3300009176 Bacteria 1653
102 Ga0105248_10001880 3300009177 Bacteria 23293
103 Ga0105248_10058044 3300009177 Bacteria 4345
104 Ga0105248_10091803 3300009177 Unclassified 3419
105 Ga0157374_10018044 3300013296 Bacteria 6223
106 Ga0157378_10111625 3300013297 Bacteria 2507
107 Ga0163162_10045101 3300013306 Bacteria 4417
108 Ga0163162_10104824 3300013306 Unclassified 2922
109 Ga0157375_10043700 3300013308 Bacteria 4348
110 Ga0157380_10006179 3300014326 Bacteria 8400
111 Ga0157380_10038674 3300014326 Unclassified 3706
112 Ga0157380_10041507 3300014326 Unclassified 3591
113 Ga0157379_10064220 3300014968 Unclassified 3281
114 Ga0157379_10340572 3300014968 Bacteria 1371
115 Ga0157376_10007542 3300014969 Bacteria 7777
116 Ga0207697_10073466 3300025315 Bacteria 1435
117 Ga0207682_10015401 3300025893 Unclassified 2976
118 Ga0207688_10012604 3300025901 Unclassified 4602
119 Ga0207680_10092981 3300025903 Bacteria 1923
120 Ga0207645_10092938 3300025907 Unclassified 1941
121 Ga0207643_10011868 3300025908 Unclassified 4702
122 Ga0207705_10058134 3300025909 Unclassified 2790
123 Ga0207654_10086982 3300025911 Bacteria 1895
124 Ga0207693_10166606 3300025915 Unclassified 1735
125 Ga0207646_10300996 3300025922 Unclassified 1449
126 Ga0207650_10029403 3300025925 Unclassified 3951
127 Ga0207659_10002383 3300025926 Bacteria 11193
128 Ga0207659_10036807 3300025926 Bacteria 3394
129 Ga0207659_10096284 3300025926 Bacteria 2221
130 Ga0207687_10054759 3300025927 Unclassified 2792
131 Ga0207644_10210875 3300025931 Unclassified 1536
132 Ga0207686_10038778 3300025934 Bacteria 2886
133 Ga0207686_10391818 3300025934 Bacteria 1056
134 Ga0207669_10000130 3300025937 Bacteria 37362
135 Ga0207669_10058479 3300025937 Unclassified 2352
136 Ga0207665_10093252 3300025939 Bacteria 2090
137 Ga0207691_10002001 3300025940 Bacteria 19937
138 Ga0207711_10172070 3300025941 Bacteria 1965
139 Ga0207711_10242225 3300025941 Bacteria 1654
140 Ga0207711_10340618 3300025941 Bacteria 1388
141 Ga0207689_10262186 3300025942 Bacteria 1430
142 Ga0207679_10008077 3300025945 Bacteria 6694
143 Ga0207651_10016403 3300025960 Bacteria 4338
144 Ga0207651_10020949 3300025960 Unclassified 3960
145 Ga0207658_10039188 3300025986 Bacteria 3418
146 Ga0207658_10295129 3300025986 Bacteria 1394
147 Ga0207677_10251319 3300026023 Unclassified 1436
148 Ga0207703_10028754 3300026035 Bacteria 4385
149 Ga0207703_10051928 3300026035 Unclassified 3326
150 Ga0207641_10080686 3300026088 Bacteria 2823
151 Ga0207648_10063913 3300026089 Bacteria 3207
152 Ga0207648_10126112 3300026089 Unclassified 2252
153 Ga0207675_100091679 3300026118 Bacteria 2857
154 Ga0207698_10239468 3300026142 Unclassified 1653
155 Ga0207428_10008785 3300027907 Bacteria 9110
156 Ga0207428_10027473 3300027907 Bacteria 4736
157 Ga0207428_10031379 3300027907 Bacteria 4384
158 Ga0207428_10054325 3300027907 Bacteria 3190
159 Ga0268266_10062220 3300028379 Unclassified 3220
160 Ga0268265_10014083 3300028380 Bacteria 5450
161 Ga0268265_10149534 3300028380 Bacteria 1968
162 Ga0268264_10188160 3300028381 Bacteria 1880
163 Ga0307416_100106470 3300032002 Bacteria 2458
164 Ga0307415_100366013 3300032126 Unclassified 1219
165 Ga0373955_0004068 3300035172 Bacteria 6454
166 Ga0373924_0016215 3300035410 Unclassified 2842
167 Ga0373947_0010028 3300035725 Bacteria 5440
168 Ga0373947_0018787 3300035725 Unclassified 3982
169 Ga0373937_0372405 3300036401 Unclassified 1354
170 Ga0373937_0482161 3300036401 Bacteria 1178
171 Ga0373925_0008607 3300037068 Bacteria 7436
172 Ga0495592_0006832 3300046454 Bacteria 8520
173 Ga0495653_0152199 3300046463 Bacteria 1615
174 Ga0495580_0124349 3300046472 Bacteria 1790
175 Ga0495608_0057770 3300046511 Bacteria 2559
176 Ga0495618_0070758 3300046514 Bacteria 2219
177 Ga0495630_0003724 3300046517 Bacteria 10632
178 Ga0495652_0202511 3300046529 Bacteria 1505
179 Ga0495640_0142118 3300046533 Unclassified 1547
180 Ga0495621_0117711 3300046539 Unclassified 1024
181 Ga0495634_0196426 3300046642 Unclassified 1255
182 Ga0495599_0039100 3300046678 Bacteria 2981
183 Ga0495669_0006751 3300046684 Bacteria 4802
184 Ga0495613_0003466 3300046689 Bacteria 11799
185 Ga0495600_0148364 3300046809 Bacteria 1519
186 Ga0495581_0012208 3300047315 Bacteria 4975
187 Ga0495604_0150202 3300047317 Bacteria 1656
188 Ga0495674_0124587 3300047319 Bacteria 2175
189 Ga0495680_0156673 3300047322 Bacteria 1656
190 Ga0495684_0000704 3300047471 Bacteria 26850
191 Ga0495602_0145605 3300048088 Bacteria 1870
192 Ga0496102_0487890 3300048905 Bacteria 1154
193 Ga0496104_0264009 3300048907 Bacteria 1634
194 Ga0496114_0150157 3300048917 Bacteria 2021
195 Ga0501038_0074320 3300049574 Bacteria 2876
196 Ga0501048_0289489 3300049582 Bacteria 1165
197 Ga0501071_0015655 3300049587 Bacteria 5207
198 Ga0501072_0338429 3300049588 Bacteria 1195
199 Ga0501080_0043512 3300049742 Bacteria 4182
200 nmdc:mga05p37_10556_c1 3300050507 Bacteria 10951
201 nmdc:mga05p37_112792_c1 3300050507 Bacteria 3343
202 nmdc:mga05p37_16134_c1 3300050507 Bacteria 8993
203 nmdc:mga05p37_171479_c1 3300050507 Bacteria 2646
204 nmdc:mga05p37_39688_c1 3300050507 Bacteria 5780
205 nmdc:mga05p37_496261_c1 3300050507 Unclassified 1402
206 nmdc:mga05p37_61125_c1 3300050507 Bacteria 4638
207 nmdc:mga05p37_801830_c1 3300050507 Bacteria 1030
208 nmdc:mga05p37_86017_c1 3300050507 Bacteria 3875
209 nmdc:mga09592_1653_c1 3300050508 Bacteria 17927
210 nmdc:mga09592_223678_c1 3300050508 Bacteria 1630
211 nmdc:mga09592_55278_c1 3300050508 Unclassified 3354
212 nmdc:mga09592_57242_c1 3300050508 Bacteria 3294
213 nmdc:mga0qj67_17356_c1 3300050509 Bacteria 5471
214 nmdc:mga0qj67_223299_c1 3300050509 Bacteria 1529
215 nmdc:mga06r32_220748_c1 3300050510 Unclassified 1884
216 nmdc:mga06r32_23367_c1 3300050510 Bacteria 5718
217 nmdc:mga06r32_260149_c1 3300050510 Unclassified 1723
218 nmdc:mga06r32_51095_c1 3300050510 Unclassified 3956
219 nmdc:mga08y16_12313_c1 3300050511 Bacteria 8995
220 nmdc:mga08y16_18223_c1 3300050511 Bacteria 7397
221 nmdc:mga08y16_298_c1 3300050511 Bacteria 27861
222 nmdc:mga08y16_34165_c1 3300050511 Bacteria 5342
223 nmdc:mga08y16_6213_c1 3300050511 Bacteria 12531
224 nmdc:mga08y16_62684_c1 3300050511 Bacteria 3883
225 nmdc:mga08y16_65222_c1 3300050511 Bacteria 3802
226 nmdc:mga08y16_9379_c1 3300050511 Bacteria 10264
227 nmdc:mga0n895_24406_c1 3300050512 Bacteria 5699
228 nmdc:mga0n895_251904_c1 3300050512 Bacteria 1792
229 nmdc:mga0rr50_1799_c1 3300050513 Bacteria 11853
230 nmdc:mga0rr50_30102_c1 3300050513 Bacteria 3839
231 nmdc:mga08x19_9380_c1 3300050514 Bacteria 5859
232 nmdc:mga0a205_138838_c1 3300050515 Bacteria 2331
233 nmdc:mga0a205_283610_c1 3300050515 Bacteria 1532
234 nmdc:mga0a205_37079_c1 3300050515 Unclassified 4688
235 Ga0495601_0000588 3300053077 Bacteria 19344
236 Ga0495619_0005871 3300053085 Bacteria 7779
237 Ga0111539_10056632
238 Ga0070658_10027319
239 Ga0070690_100010018
240 Ga0070670_100030698
241 Ga0070677_10000224
242 Ga0070677_10059897
243 Ga0070666_10236766
244 Ga0070682_100103319
245 Ga0070689_100020278
246 Ga0070669_100009793
247 Ga0070669_100016784
248 Ga0070675_100002656
249 Ga0070675_100003443
250 Ga0070675_100084615
251 Ga0070675_100119627
252 Ga0070671_100021876
253 Ga0070671_100255358
254 Ga0070674_100000066
255 Ga0070674_100064388
256 Ga0070673_100008436
257 Ga0070673_100052892
258 Ga0070673_100444361
259 Ga0070688_100005237
260 Ga0070667_100009415
261 Ga0070667_100362549
262 Ga0070713_100046506
263 Ga0070710_10039105
264 Ga0070701_10203692
265 Ga0068867_100017070
266 Ga0068867_100040647
267 Ga0070685_10199271
268 Ga0070698_100012728
269 Ga0070698_100488733
270 Ga0070699_100047963
271 Ga0070697_100039943
272 Ga0070672_100014106
273 Ga0070672_100037735
274 Ga0070695_100058148
275 Ga0070665_100008401
276 Ga0070665_100137182
277 Ga0070664_100011885
278 Ga0068859_100081942
279 Ga0068859_100302137
280 Ga0068864_100216074
281 Ga0068863_100060438
282 Ga0068858_100061672
283 Ga0068858_100069017
284 Ga0068858_100134298
285 Ga0068858_100141332
286 Ga0068860_100015270
287 Ga0068860_100183051
288 Ga0068862_100022885
289 Ga0081455_10041120
290 Ga0070712_100018924
291 Ga0097621_100006017
292 Ga0097621_100240573
293 Ga0068871_100157465
294 Ga0075428_100000809
295 Ga0075428_100087584
296 Ga0075428_100225644
297 Ga0075430_100002275
298 Ga0075430_100137487
299 Ga0075431_100011839
300 Ga0075431_100037194
301 Ga0075431_100072205
302 Ga0075431_100142801
303 Ga0075431_100272694
304 Ga0075433_10046014
305 Ga0075433_10090102
306 Ga0075433_10099066
307 Ga0075434_100007347
308 Ga0075429_100008996
309 Ga0075429_100042880
310 Ga0075429_100063765
311 Ga0075429_100064557
312 Ga0075436_100002534
313 Ga0097620_100081941
314 Ga0097620_100302172
315 Ga0075435_100022712
316 Ga0075435_100038834
317 Ga0075435_100134503
318 Ga0111539_10004532
319 Ga0111539_10009188
320 Ga0111539_10010338
321 Ga0111539_10021159
322 Ga0111539_10091813
323 Ga0111539_10135765
324 Ga0105245_10155418
325 Ga0114129_10001194
326 Ga0114129_10007467
327 Ga0114129_10010101
328 Ga0114129_10014791
329 Ga0114129_10030152
330 Ga0114129_10034614
331 Ga0114129_10039432
332 Ga0114129_10080311
333 Ga0114129_10115115
334 Ga0114129_10508831
335 Ga0114129_10633376
336 Ga0105241_10166320
337 Ga0105242_10232356
338 Ga0105248_10001880
339 Ga0105248_10058044
340 Ga0105248_10091803
341 Ga0157374_10018044
342 Ga0157378_10111625
343 Ga0163162_10045101
344 Ga0163162_10104824
345 Ga0157375_10043700
346 Ga0157380_10006179
347 Ga0157380_10038674
348 Ga0157380_10041507
349 Ga0157379_10064220
350 Ga0157379_10340572
351 Ga0157376_10007542
352 Ga0207697_10073466
353 Ga0207682_10015401
354 Ga0207688_10012604
355 Ga0207680_10092981
356 Ga0207645_10092938
357 Ga0207643_10011868
358 Ga0207705_10058134
359 Ga0207654_10086982
360 Ga0207693_10166606
361 Ga0207646_10300996
362 Ga0207650_10029403
363 Ga0207659_10002383
364 Ga0207659_10036807
365 Ga0207659_10096284
366 Ga0207687_10054759
367 Ga0207644_10210875
368 Ga0207686_10038778
369 Ga0207686_10391818
370 Ga0207669_10000130
371 Ga0207669_10058479
372 Ga0207665_10093252
373 Ga0207691_10002001
374 Ga0207711_10172070
375 Ga0207711_10242225
376 Ga0207711_10340618
377 Ga0207689_10262186
378 Ga0207679_10008077
379 Ga0207651_10016403
380 Ga0207651_10020949
381 Ga0207658_10039188
382 Ga0207658_10295129
383 Ga0207677_10251319
384 Ga0207703_10028754
385 Ga0207703_10051928
386 Ga0207641_10080686
387 Ga0207648_10063913
388 Ga0207648_10126112
389 Ga0207675_100091679
390 Ga0207698_10239468
391 Ga0207428_10008785
392 Ga0207428_10027473
393 Ga0207428_10031379
394 Ga0207428_10054325
395 Ga0268266_10062220
396 Ga0268265_10014083
397 Ga0268265_10149534
398 Ga0268264_10188160
399 Ga0307416_100106470
400 Ga0307415_100366013
401 Ga0373955_0004068
402 Ga0373924_0016215
403 Ga0373947_0010028
404 Ga0373947_0018787
405 Ga0373937_0372405
406 Ga0373937_0482161
407 Ga0373925_0008607
408 Ga0495592_0006832
409 Ga0495653_0152199
410 Ga0495580_0124349
411 Ga0495608_0057770
412 Ga0495618_0070758
413 Ga0495630_0003724
414 Ga0495652_0202511
415 Ga0495640_0142118
416 Ga0495621_0117711
417 Ga0495634_0196426
418 Ga0495599_0039100
419 Ga0495669_0006751
420 Ga0495613_0003466
421 Ga0495600_0148364
422 Ga0495581_0012208
423 Ga0495604_0150202
424 Ga0495674_0124587
425 Ga0495680_0156673
426 Ga0495684_0000704
427 Ga0495602_0145605
428 Ga0496102_0487890
429 Ga0496104_0264009
430 Ga0496114_0150157
431 Ga0501038_0074320
432 Ga0501048_0289489
433 Ga0501071_0015655
434 Ga0501072_0338429
435 Ga0501080_0043512
436 nmdc:mga05p37_10556_c1
437 nmdc:mga05p37_112792_c1
438 nmdc:mga05p37_16134_c1
439 nmdc:mga05p37_171479_c1
440 nmdc:mga05p37_39688_c1
441 nmdc:mga05p37_496261_c1
442 nmdc:mga05p37_61125_c1
443 nmdc:mga05p37_801830_c1
444 nmdc:mga05p37_86017_c1
445 nmdc:mga09592_1653_c1
446 nmdc:mga09592_223678_c1
447 nmdc:mga09592_55278_c1
448 nmdc:mga09592_57242_c1
449 nmdc:mga0qj67_17356_c1
450 nmdc:mga0qj67_223299_c1
451 nmdc:mga06r32_220748_c1
452 nmdc:mga06r32_23367_c1
453 nmdc:mga06r32_260149_c1
454 nmdc:mga06r32_51095_c1
455 nmdc:mga08y16_12313_c1
456 nmdc:mga08y16_18223_c1
457 nmdc:mga08y16_298_c1
458 nmdc:mga08y16_34165_c1
459 nmdc:mga08y16_6213_c1
460 nmdc:mga08y16_62684_c1
461 nmdc:mga08y16_65222_c1
462 nmdc:mga08y16_9379_c1
463 nmdc:mga0n895_24406_c1
464 nmdc:mga0n895_251904_c1
465 nmdc:mga0rr50_1799_c1
466 nmdc:mga0rr50_30102_c1
467 nmdc:mga08x19_9380_c1
468 nmdc:mga0a205_138838_c1
469 nmdc:mga0a205_283610_c1
470 nmdc:mga0a205_37079_c1
471 Ga0495601_0000588
472 Ga0495619_0005871

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13401

AAA_22

AAA domain

39

172

0.92

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

46

187

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
1sxj-assembly1.cif.gz_C crystal structure of the eukaryotic clamp loader (replication factor c, rfc) bound to the dna sliding clamp (proliferating cell nuclear antigen, pcna) 0.7616 26 265
7jgr-assembly1.cif.gz_G structure of drosophila orc bound to dna (84 bp) and cdc6 0.7545 11 269
3pfi-assembly1.cif.gz_B 2.7 angstrom resolution crystal structure of a probable holliday junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni nctc 11168 in complex with adenosine-5'-diphosphate 0.7338 23 271
2kru-assembly1.cif.gz_A solution nmr structure of the pcp_red domain of light-independent protochlorophyllide reductase subunit b from chlorobium tepidum. northeast structural genomics consortium target ctr69a 0.7289 216 274
8dqx-assembly1.cif.gz_C open state of rfc:pcna bound to a 3' ss/dsdna junction 0.7279 27 265
ID Description Score Start End Superfamily
af_I6XFD1_186_270_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9193 185 268 1.10.8.60
af_I6XFD1_186_270_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.8989 185 268 1.10.8.60
2xszB02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.8974 216 267 1.10.8.60
3k1jB02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.8923 216 266 1.10.8.60
4zpxB02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.8777 216 266 1.10.8.60
ID Description Score Start End GO Terms
AF-A0A7C4R1E1-F1-model_v4 AAA+ ATPase domain-containing protein 0.9524 1 268 GO:0016020
GO:0016887
AF-A0A2V6VML3-F1-model_v4 AAA+ ATPase domain-containing protein 0.9424 2 268 GO:0016020
GO:0016887
AF-A0A3B1CS46-F1-model_v4 Type II secretory pathway, component ExeA (Predicted ATPase) 0.9424 1 269 GO:0016887
AF-A0A536TTB0-F1-model_v4 AAA family ATPase 0.9409 1 266 GO:0016887
GO:0042834
AF-A0A7X8H531-F1-model_v4 deleted 0.94 1 268

Map