F348498
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 235 | 161 | 470 | 349 |
Family's Representative Sequence
| Representative Sequence | 3300048905|Ga0496102_0116685|Ga0496102_0116685_114_1262 |
| Length | 382 |
| Sequence | VLVTVIEARPLRSLERVSVPLGPGITSVVGPNGVGKTNLVEALYFALTGRSFRTSDRRDLIPFGESLARAEATVRDEDGIERRLLASVSRTEGRRHLLDGQSVDPATIARSRPPVAVFAPDRLSLVKGPPAERRAHLDGFLAARWPARGELRKRFGQALAQRNAMVSRVAAGYGSPEALDVWDAGVADAAAPLVAARTEAVDELAPAFAMALAELGLEGGELIYAPRAEGDATAIREGLRERRDADLKLGRSSWGPHLDELKLNAGGRALRKYGSQGQQRAALLALLFAEREALLHARRVTPLLLLDDVMSELDPGRRDLLVARLTAGGQTLITAADEESLPAAARVAMVRMPSPGVVDLGSGAAGPSEAAERLGGPGAEAA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 2 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 3 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 6 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 7 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 11 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 17 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 20 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 21 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 22 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 23 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 25 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 26 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 27 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 28 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 29 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 30 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 31 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 32 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 33 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 34 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 35 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 36 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 37 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 52 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 82 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 83 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 84 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 85 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 86 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046523 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046537 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 112 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 113 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 114 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 115 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 116 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 117 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 118 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 119 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 120 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 121 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 122 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 123 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 124 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 125 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 126 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 127 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 128 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 129 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 130 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 131 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 132 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 133 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 134 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 135 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 136 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 137 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 138 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 139 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 140 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 141 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 142 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 143 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 144 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 145 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 146 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 147 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 148 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 149 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 150 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 151 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 152 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 153 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 154 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 155 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 156 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 157 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 158 | 3300053083 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere | Metagenome | Rhizosphere |
| 159 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 160 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 161 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 99.57 |
| Metatranscriptomes | 0.43 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 14.47 |
| Rhizosphere | 82.98 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.43 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0496102_0116685 | 3300048905 | Bacteria | 2491 |
| 2 | Ga0070683_100003521 | 3300005329 | Bacteria | 12744 |
| 3 | Ga0070683_100005126 | 3300005329 | Bacteria | 10892 |
| 4 | Ga0070666_10003848 | 3300005335 | Bacteria | 9107 |
| 5 | Ga0070666_10032789 | 3300005335 | Bacteria | 3433 |
| 6 | Ga0070682_100000016 | 3300005337 | Bacteria | 239799 |
| 7 | Ga0070682_100000029 | 3300005337 | Bacteria | 183516 |
| 8 | Ga0068868_100076053 | 3300005338 | Bacteria | 2684 |
| 9 | Ga0070691_10000009 | 3300005341 | Bacteria | 58678 |
| 10 | Ga0070661_100000909 | 3300005344 | Bacteria | 21226 |
| 11 | Ga0070668_100053910 | 3300005347 | Bacteria | 3101 |
| 12 | Ga0070675_100000015 | 3300005354 | Bacteria | 201080 |
| 13 | Ga0070688_100005079 | 3300005365 | Bacteria | 6898 |
| 14 | Ga0070659_100018149 | 3300005366 | Bacteria | 5307 |
| 15 | Ga0070667_100091171 | 3300005367 | Bacteria | 2620 |
| 16 | Ga0070714_100150394 | 3300005435 | Bacteria | 2098 |
| 17 | Ga0070713_100000014 | 3300005436 | Bacteria | 124804 |
| 18 | Ga0070711_100130019 | 3300005439 | Bacteria | 1874 |
| 19 | Ga0070700_100050731 | 3300005441 | Bacteria | 2580 |
| 20 | Ga0070663_100001091 | 3300005455 | Bacteria | 14884 |
| 21 | Ga0070662_100000008 | 3300005457 | Bacteria | 168754 |
| 22 | Ga0070681_10021651 | 3300005458 | Bacteria | 6446 |
| 23 | Ga0070685_10000028 | 3300005466 | Bacteria | 90128 |
| 24 | Ga0070685_10000988 | 3300005466 | Bacteria | 15282 |
| 25 | Ga0070679_100000812 | 3300005530 | Bacteria | 27087 |
| 26 | Ga0070679_100002013 | 3300005530 | Bacteria | 18239 |
| 27 | Ga0070684_100003227 | 3300005535 | Bacteria | 12195 |
| 28 | Ga0070684_100004857 | 3300005535 | Bacteria | 10272 |
| 29 | Ga0070684_100005423 | 3300005535 | Bacteria | 9772 |
| 30 | Ga0070665_100000120 | 3300005548 | Bacteria | 148340 |
| 31 | Ga0070665_100005793 | 3300005548 | Bacteria | 12678 |
| 32 | Ga0068854_100001457 | 3300005578 | Bacteria | 14328 |
| 33 | Ga0068856_100000186 | 3300005614 | Bacteria | 64970 |
| 34 | Ga0068856_100062066 | 3300005614 | Bacteria | 3692 |
| 35 | Ga0068856_100176516 | 3300005614 | Bacteria | 2149 |
| 36 | Ga0068852_100000013 | 3300005616 | Bacteria | 139537 |
| 37 | Ga0068864_100000044 | 3300005618 | Bacteria | 157919 |
| 38 | Ga0068851_10000347 | 3300005834 | Bacteria | 20830 |
| 39 | Ga0068851_10010827 | 3300005834 | Bacteria | 4262 |
| 40 | Ga0068863_100025812 | 3300005841 | Bacteria | 5605 |
| 41 | Ga0068858_100000035 | 3300005842 | Bacteria | 140466 |
| 42 | Ga0068858_100000042 | 3300005842 | Bacteria | 132482 |
| 43 | Ga0068860_100167307 | 3300005843 | Bacteria | 2123 |
| 44 | Ga0068862_100051746 | 3300005844 | Bacteria | 3513 |
| 45 | Ga0081455_10077973 | 3300005937 | Bacteria | 2724 |
| 46 | Ga0081539_10000674 | 3300005985 | Bacteria | 68446 |
| 47 | Ga0075431_100136308 | 3300006847 | Bacteria | 2531 |
| 48 | Ga0075433_10000031 | 3300006852 | Bacteria | 55735 |
| 49 | Ga0105245_10000045 | 3300009098 | Bacteria | 134057 |
| 50 | Ga0105245_10000053 | 3300009098 | Bacteria | 125678 |
| 51 | Ga0105245_10000488 | 3300009098 | Bacteria | 36321 |
| 52 | Ga0105241_10056699 | 3300009174 | Bacteria | 3004 |
| 53 | Ga0105242_10000017 | 3300009176 | Bacteria | 122190 |
| 54 | Ga0105242_10003275 | 3300009176 | Bacteria | 12623 |
| 55 | Ga0105248_10000089 | 3300009177 | Bacteria | 102101 |
| 56 | Ga0105249_10005721 | 3300009553 | Bacteria | 10750 |
| 57 | Ga0105239_10033037 | 3300010375 | Bacteria | 5683 |
| 58 | Ga0157371_10001899 | 3300013102 | Bacteria | 20894 |
| 59 | Ga0157370_10005002 | 3300013104 | Bacteria | 14996 |
| 60 | Ga0157370_10010841 | 3300013104 | Bacteria | 9573 |
| 61 | Ga0157369_10000037 | 3300013105 | Bacteria | 190395 |
| 62 | Ga0157378_10006712 | 3300013297 | Bacteria | 10058 |
| 63 | Ga0157378_10015485 | 3300013297 | Bacteria | 6681 |
| 64 | Ga0157372_10000064 | 3300013307 | Bacteria | 114648 |
| 65 | Ga0163163_10275655 | 3300014325 | Bacteria | 1733 |
| 66 | Ga0157380_10000163 | 3300014326 | Bacteria | 38484 |
| 67 | Ga0163161_10000058 | 3300017792 | Bacteria | 114035 |
| 68 | Ga0163161_10026008 | 3300017792 | Bacteria | 4145 |
| 69 | Ga0206353_11925636 | 3300020082 | Unclassified | 1478 |
| 70 | Ga0207656_10080282 | 3300025321 | Bacteria | 1465 |
| 71 | Ga0207680_10010242 | 3300025903 | Bacteria | 4684 |
| 72 | Ga0207680_10023960 | 3300025903 | Bacteria | 3342 |
| 73 | Ga0207707_10016078 | 3300025912 | Bacteria | 6527 |
| 74 | Ga0207693_10033633 | 3300025915 | Bacteria | 4044 |
| 75 | Ga0207660_10115509 | 3300025917 | Bacteria | 2026 |
| 76 | Ga0207649_10000025 | 3300025920 | Bacteria | 177532 |
| 77 | Ga0207652_10000385 | 3300025921 | Bacteria | 45964 |
| 78 | Ga0207652_10000544 | 3300025921 | Bacteria | 38182 |
| 79 | Ga0207659_10000300 | 3300025926 | Bacteria | 29936 |
| 80 | Ga0207687_10000021 | 3300025927 | Bacteria | 226396 |
| 81 | Ga0207687_10000023 | 3300025927 | Bacteria | 217098 |
| 82 | Ga0207687_10000241 | 3300025927 | Bacteria | 37298 |
| 83 | Ga0207700_10000009 | 3300025928 | Bacteria | 314953 |
| 84 | Ga0207664_10077973 | 3300025929 | Bacteria | 2686 |
| 85 | Ga0207690_10045738 | 3300025932 | Bacteria | 2894 |
| 86 | Ga0207690_10085359 | 3300025932 | Bacteria | 2216 |
| 87 | Ga0207706_10000016 | 3300025933 | Bacteria | 170697 |
| 88 | Ga0207686_10000016 | 3300025934 | Bacteria | 198779 |
| 89 | Ga0207686_10000029 | 3300025934 | Bacteria | 160239 |
| 90 | Ga0207686_10000189 | 3300025934 | Bacteria | 47718 |
| 91 | Ga0207711_10000083 | 3300025941 | Bacteria | 102109 |
| 92 | Ga0207661_10000064 | 3300025944 | Bacteria | 75730 |
| 93 | Ga0207661_10001101 | 3300025944 | Bacteria | 17973 |
| 94 | Ga0207661_10004118 | 3300025944 | Bacteria | 10162 |
| 95 | Ga0207661_10011019 | 3300025944 | Bacteria | 6534 |
| 96 | Ga0207661_10160173 | 3300025944 | Bacteria | 1952 |
| 97 | Ga0207712_10005990 | 3300025961 | Bacteria | 7673 |
| 98 | Ga0207640_10001259 | 3300025981 | Bacteria | 13765 |
| 99 | Ga0207658_10027792 | 3300025986 | Bacteria | 3978 |
| 100 | Ga0207658_10242177 | 3300025986 | Bacteria | 1528 |
| 101 | Ga0207677_10000783 | 3300026023 | Bacteria | 18211 |
| 102 | Ga0207703_10000060 | 3300026035 | Bacteria | 134334 |
| 103 | Ga0207703_10000067 | 3300026035 | Bacteria | 125623 |
| 104 | Ga0207678_10001148 | 3300026067 | Bacteria | 24280 |
| 105 | Ga0207708_10074970 | 3300026075 | Bacteria | 2594 |
| 106 | Ga0207702_10000134 | 3300026078 | Bacteria | 88324 |
| 107 | Ga0207702_10002492 | 3300026078 | Bacteria | 17387 |
| 108 | Ga0207702_10011005 | 3300026078 | Bacteria | 7547 |
| 109 | Ga0207641_10008490 | 3300026088 | Bacteria | 8493 |
| 110 | Ga0207676_10000043 | 3300026095 | Bacteria | 161948 |
| 111 | Ga0207698_10000002 | 3300026142 | Bacteria | 404991 |
| 112 | Ga0207698_10025419 | 3300026142 | Bacteria | 4172 |
| 113 | Ga0268266_10000023 | 3300028379 | Bacteria | 501899 |
| 114 | Ga0268266_10000748 | 3300028379 | Bacteria | 43458 |
| 115 | Ga0268266_10001671 | 3300028379 | Bacteria | 25564 |
| 116 | Ga0268266_10052138 | 3300028379 | Bacteria | 3513 |
| 117 | Ga0268264_10057146 | 3300028381 | Bacteria | 3263 |
| 118 | Ga0373937_0003461 | 3300036401 | Bacteria | 13268 |
| 119 | Ga0466963_0153194 | 3300044694 | Bacteria | 1601 |
| 120 | Ga0466963_0180678 | 3300044694 | Bacteria | 1473 |
| 121 | Ga0466957_0004382 | 3300044842 | Bacteria | 7852 |
| 122 | Ga0466960_0102061 | 3300044901 | Bacteria | 1478 |
| 123 | Ga0466967_0000004 | 3300045976 | Bacteria | 155664 |
| 124 | Ga0495641_0050919 | 3300046461 | Bacteria | 1892 |
| 125 | Ga0495662_0019149 | 3300046476 | Bacteria | 3312 |
| 126 | Ga0495608_0000001 | 3300046511 | Bacteria | 411278 |
| 127 | Ga0495628_0172424 | 3300046516 | Bacteria | 1640 |
| 128 | Ga0495630_0000007 | 3300046517 | Bacteria | 376915 |
| 129 | Ga0495630_0008466 | 3300046517 | Bacteria | 7383 |
| 130 | Ga0495644_0000253 | 3300046523 | Bacteria | 24763 |
| 131 | Ga0495587_0004726 | 3300046536 | Bacteria | 8936 |
| 132 | Ga0495598_0001743 | 3300046537 | Bacteria | 4365 |
| 133 | Ga0495621_0000503 | 3300046539 | Bacteria | 9686 |
| 134 | Ga0495634_0000187 | 3300046642 | Bacteria | 57203 |
| 135 | Ga0495634_0002006 | 3300046642 | Bacteria | 17340 |
| 136 | Ga0495657_0000002 | 3300046675 | Bacteria | 411958 |
| 137 | Ga0495599_0007873 | 3300046678 | Bacteria | 6463 |
| 138 | Ga0495647_0000059 | 3300046681 | Bacteria | 27437 |
| 139 | Ga0495647_0015279 | 3300046681 | Bacteria | 2687 |
| 140 | Ga0495658_0006255 | 3300046683 | Bacteria | 5853 |
| 141 | Ga0495669_0000163 | 3300046684 | Bacteria | 42549 |
| 142 | Ga0495613_0001313 | 3300046689 | Bacteria | 18984 |
| 143 | Ga0495624_0000207 | 3300046690 | Bacteria | 45289 |
| 144 | Ga0495670_0054376 | 3300046691 | Bacteria | 2005 |
| 145 | Ga0495649_0004195 | 3300046694 | Bacteria | 9461 |
| 146 | Ga0495604_0000033 | 3300047317 | Bacteria | 134810 |
| 147 | Ga0495604_0001650 | 3300047317 | Bacteria | 18348 |
| 148 | Ga0495604_0020460 | 3300047317 | Bacteria | 5285 |
| 149 | Ga0495676_0010013 | 3300047321 | Bacteria | 8612 |
| 150 | Ga0495676_0099808 | 3300047321 | Bacteria | 2151 |
| 151 | Ga0495680_0000286 | 3300047322 | Bacteria | 56839 |
| 152 | Ga0495680_0206688 | 3300047322 | Bacteria | 1407 |
| 153 | Ga0495675_0000228 | 3300047444 | Bacteria | 40555 |
| 154 | Ga0495602_0000010 | 3300048088 | Bacteria | 212121 |
| 155 | Ga0495602_0021123 | 3300048088 | Bacteria | 6416 |
| 156 | Ga0495614_0099922 | 3300048089 | Bacteria | 1267 |
| 157 | Ga0496100_0000003 | 3300048903 | Bacteria | 360802 |
| 158 | Ga0496100_0000008 | 3300048903 | Bacteria | 231974 |
| 159 | Ga0496101_0000003 | 3300048904 | Bacteria | 406565 |
| 160 | Ga0496101_0000016 | 3300048904 | Bacteria | 240753 |
| 161 | Ga0496101_0088610 | 3300048904 | Bacteria | 2299 |
| 162 | Ga0496103_0034593 | 3300048906 | Bacteria | 3090 |
| 163 | Ga0496104_0000063 | 3300048907 | Bacteria | 116618 |
| 164 | Ga0496104_0039940 | 3300048907 | Bacteria | 4396 |
| 165 | Ga0496104_0054023 | 3300048907 | Bacteria | 3797 |
| 166 | Ga0496105_0000041 | 3300048908 | Bacteria | 116618 |
| 167 | Ga0496106_0000048 | 3300048909 | Bacteria | 98233 |
| 168 | Ga0496106_0000085 | 3300048909 | Bacteria | 74004 |
| 169 | Ga0496107_0000008 | 3300048910 | Bacteria | 251874 |
| 170 | Ga0496107_0000009 | 3300048910 | Bacteria | 231682 |
| 171 | Ga0496108_0000024 | 3300048911 | Bacteria | 183389 |
| 172 | Ga0496108_0000153 | 3300048911 | Bacteria | 66080 |
| 173 | Ga0496108_0001788 | 3300048911 | Bacteria | 17124 |
| 174 | Ga0496108_0006319 | 3300048911 | Bacteria | 9601 |
| 175 | Ga0496109_0000033 | 3300048912 | Bacteria | 160496 |
| 176 | Ga0496109_0000267 | 3300048912 | Bacteria | 50405 |
| 177 | Ga0496109_0000809 | 3300048912 | Bacteria | 26080 |
| 178 | Ga0496109_0091388 | 3300048912 | Bacteria | 2815 |
| 179 | Ga0496109_0310701 | 3300048912 | Bacteria | 1487 |
| 180 | Ga0496110_0017576 | 3300048913 | Bacteria | 5981 |
| 181 | Ga0496110_0042075 | 3300048913 | Bacteria | 3988 |
| 182 | Ga0496111_0004510 | 3300048914 | Bacteria | 8811 |
| 183 | Ga0496112_0319185 | 3300048915 | Bacteria | 1498 |
| 184 | Ga0496113_0072027 | 3300048916 | Bacteria | 2629 |
| 185 | Ga0496113_0256332 | 3300048916 | Bacteria | 1397 |
| 186 | Ga0496114_0000010 | 3300048917 | Bacteria | 363396 |
| 187 | Ga0496114_0154222 | 3300048917 | Bacteria | 1994 |
| 188 | Ga0496115_0000074 | 3300048918 | Bacteria | 90267 |
| 189 | Ga0496115_0000212 | 3300048918 | Bacteria | 53976 |
| 190 | Ga0496116_0000014 | 3300048919 | Bacteria | 569049 |
| 191 | Ga0496117_0020774 | 3300048920 | Bacteria | 5342 |
| 192 | Ga0496118_0011810 | 3300048921 | Bacteria | 8478 |
| 193 | Ga0496120_0009734 | 3300048923 | Bacteria | 6781 |
| 194 | Ga0496121_0047226 | 3300048924 | Bacteria | 3676 |
| 195 | Ga0496126_0012061 | 3300048929 | Bacteria | 8881 |
| 196 | Ga0501031_0000396 | 3300049568 | Bacteria | 25435 |
| 197 | Ga0501032_0002773 | 3300049569 | Bacteria | 13644 |
| 198 | Ga0501033_0000211 | 3300049570 | Bacteria | 55768 |
| 199 | Ga0501034_0017057 | 3300049571 | Bacteria | 7446 |
| 200 | Ga0501036_0001187 | 3300049572 | Bacteria | 19851 |
| 201 | Ga0501037_0000120 | 3300049573 | Bacteria | 73352 |
| 202 | Ga0501038_0000139 | 3300049574 | Bacteria | 62162 |
| 203 | Ga0501042_0177681 | 3300049578 | Bacteria | 1535 |
| 204 | Ga0501043_0000203 | 3300049579 | Bacteria | 54330 |
| 205 | Ga0501046_0000194 | 3300049580 | Bacteria | 62330 |
| 206 | Ga0501047_0000287 | 3300049581 | Bacteria | 58087 |
| 207 | Ga0501047_0007840 | 3300049581 | Bacteria | 10060 |
| 208 | Ga0501047_0068816 | 3300049581 | Bacteria | 3410 |
| 209 | Ga0501048_0000004 | 3300049582 | Bacteria | 100672 |
| 210 | Ga0501068_0019061 | 3300049584 | Bacteria | 3977 |
| 211 | Ga0501069_0011133 | 3300049585 | Bacteria | 4772 |
| 212 | Ga0501070_0000079 | 3300049586 | Bacteria | 82054 |
| 213 | Ga0501070_0007349 | 3300049586 | Bacteria | 9355 |
| 214 | Ga0501073_0016332 | 3300049589 | Bacteria | 5380 |
| 215 | Ga0501074_0010531 | 3300049590 | Bacteria | 6710 |
| 216 | Ga0501079_0011759 | 3300049741 | Bacteria | 6685 |
| 217 | Ga0501080_0010668 | 3300049742 | Bacteria | 8408 |
| 218 | Ga0501083_0013189 | 3300049744 | Bacteria | 5775 |
| 219 | Ga0501083_0017745 | 3300049744 | Bacteria | 4963 |
| 220 | Ga0501035_0000059 | 3300049822 | Bacteria | 134506 |
| 221 | Ga0501044_0000417 | 3300049823 | Bacteria | 52579 |
| 222 | Ga0501045_0026644 | 3300049824 | Bacteria | 4160 |
| 223 | nmdc:mga0a205_9_c1 | 3300050515 | Bacteria | 55726 |
| 224 | Ga0495601_0000012 | 3300053077 | Bacteria | 227853 |
| 225 | Ga0495601_0000120 | 3300053077 | Bacteria | 43540 |
| 226 | Ga0495601_0051235 | 3300053077 | Bacteria | 2606 |
| 227 | Ga0495612_0000100 | 3300053078 | Bacteria | 37132 |
| 228 | Ga0495612_0000531 | 3300053078 | Bacteria | 15351 |
| 229 | Ga0495655_0000335 | 3300053083 | Bacteria | 8292 |
| 230 | Ga0495595_0000001 | 3300053084 | Bacteria | 495226 |
| 231 | Ga0495595_0000117 | 3300053084 | Bacteria | 34251 |
| 232 | Ga0495619_0000020 | 3300053085 | Bacteria | 201556 |
| 233 | Ga0495619_0000046 | 3300053085 | Bacteria | 104451 |
| 234 | Ga0495619_0000129 | 3300053085 | Bacteria | 55936 |
| 235 | Ga0501082_0077517 | 3300060353 | Bacteria | 2865 |
| 236 | Ga0496102_0116685 | |||
| 237 | Ga0070683_100003521 | |||
| 238 | Ga0070683_100005126 | |||
| 239 | Ga0070666_10003848 | |||
| 240 | Ga0070666_10032789 | |||
| 241 | Ga0070682_100000016 | |||
| 242 | Ga0070682_100000029 | |||
| 243 | Ga0068868_100076053 | |||
| 244 | Ga0070691_10000009 | |||
| 245 | Ga0070661_100000909 | |||
| 246 | Ga0070668_100053910 | |||
| 247 | Ga0070675_100000015 | |||
| 248 | Ga0070688_100005079 | |||
| 249 | Ga0070659_100018149 | |||
| 250 | Ga0070667_100091171 | |||
| 251 | Ga0070714_100150394 | |||
| 252 | Ga0070713_100000014 | |||
| 253 | Ga0070711_100130019 | |||
| 254 | Ga0070700_100050731 | |||
| 255 | Ga0070663_100001091 | |||
| 256 | Ga0070662_100000008 | |||
| 257 | Ga0070681_10021651 | |||
| 258 | Ga0070685_10000028 | |||
| 259 | Ga0070685_10000988 | |||
| 260 | Ga0070679_100000812 | |||
| 261 | Ga0070679_100002013 | |||
| 262 | Ga0070684_100003227 | |||
| 263 | Ga0070684_100004857 | |||
| 264 | Ga0070684_100005423 | |||
| 265 | Ga0070665_100000120 | |||
| 266 | Ga0070665_100005793 | |||
| 267 | Ga0068854_100001457 | |||
| 268 | Ga0068856_100000186 | |||
| 269 | Ga0068856_100062066 | |||
| 270 | Ga0068856_100176516 | |||
| 271 | Ga0068852_100000013 | |||
| 272 | Ga0068864_100000044 | |||
| 273 | Ga0068851_10000347 | |||
| 274 | Ga0068851_10010827 | |||
| 275 | Ga0068863_100025812 | |||
| 276 | Ga0068858_100000035 | |||
| 277 | Ga0068858_100000042 | |||
| 278 | Ga0068860_100167307 | |||
| 279 | Ga0068862_100051746 | |||
| 280 | Ga0081455_10077973 | |||
| 281 | Ga0081539_10000674 | |||
| 282 | Ga0075431_100136308 | |||
| 283 | Ga0075433_10000031 | |||
| 284 | Ga0105245_10000045 | |||
| 285 | Ga0105245_10000053 | |||
| 286 | Ga0105245_10000488 | |||
| 287 | Ga0105241_10056699 | |||
| 288 | Ga0105242_10000017 | |||
| 289 | Ga0105242_10003275 | |||
| 290 | Ga0105248_10000089 | |||
| 291 | Ga0105249_10005721 | |||
| 292 | Ga0105239_10033037 | |||
| 293 | Ga0157371_10001899 | |||
| 294 | Ga0157370_10005002 | |||
| 295 | Ga0157370_10010841 | |||
| 296 | Ga0157369_10000037 | |||
| 297 | Ga0157378_10006712 | |||
| 298 | Ga0157378_10015485 | |||
| 299 | Ga0157372_10000064 | |||
| 300 | Ga0163163_10275655 | |||
| 301 | Ga0157380_10000163 | |||
| 302 | Ga0163161_10000058 | |||
| 303 | Ga0163161_10026008 | |||
| 304 | Ga0206353_11925636 | |||
| 305 | Ga0207656_10080282 | |||
| 306 | Ga0207680_10010242 | |||
| 307 | Ga0207680_10023960 | |||
| 308 | Ga0207707_10016078 | |||
| 309 | Ga0207693_10033633 | |||
| 310 | Ga0207660_10115509 | |||
| 311 | Ga0207649_10000025 | |||
| 312 | Ga0207652_10000385 | |||
| 313 | Ga0207652_10000544 | |||
| 314 | Ga0207659_10000300 | |||
| 315 | Ga0207687_10000021 | |||
| 316 | Ga0207687_10000023 | |||
| 317 | Ga0207687_10000241 | |||
| 318 | Ga0207700_10000009 | |||
| 319 | Ga0207664_10077973 | |||
| 320 | Ga0207690_10045738 | |||
| 321 | Ga0207690_10085359 | |||
| 322 | Ga0207706_10000016 | |||
| 323 | Ga0207686_10000016 | |||
| 324 | Ga0207686_10000029 | |||
| 325 | Ga0207686_10000189 | |||
| 326 | Ga0207711_10000083 | |||
| 327 | Ga0207661_10000064 | |||
| 328 | Ga0207661_10001101 | |||
| 329 | Ga0207661_10004118 | |||
| 330 | Ga0207661_10011019 | |||
| 331 | Ga0207661_10160173 | |||
| 332 | Ga0207712_10005990 | |||
| 333 | Ga0207640_10001259 | |||
| 334 | Ga0207658_10027792 | |||
| 335 | Ga0207658_10242177 | |||
| 336 | Ga0207677_10000783 | |||
| 337 | Ga0207703_10000060 | |||
| 338 | Ga0207703_10000067 | |||
| 339 | Ga0207678_10001148 | |||
| 340 | Ga0207708_10074970 | |||
| 341 | Ga0207702_10000134 | |||
| 342 | Ga0207702_10002492 | |||
| 343 | Ga0207702_10011005 | |||
| 344 | Ga0207641_10008490 | |||
| 345 | Ga0207676_10000043 | |||
| 346 | Ga0207698_10000002 | |||
| 347 | Ga0207698_10025419 | |||
| 348 | Ga0268266_10000023 | |||
| 349 | Ga0268266_10000748 | |||
| 350 | Ga0268266_10001671 | |||
| 351 | Ga0268266_10052138 | |||
| 352 | Ga0268264_10057146 | |||
| 353 | Ga0373937_0003461 | |||
| 354 | Ga0466963_0153194 | |||
| 355 | Ga0466963_0180678 | |||
| 356 | Ga0466957_0004382 | |||
| 357 | Ga0466960_0102061 | |||
| 358 | Ga0466967_0000004 | |||
| 359 | Ga0495641_0050919 | |||
| 360 | Ga0495662_0019149 | |||
| 361 | Ga0495608_0000001 | |||
| 362 | Ga0495628_0172424 | |||
| 363 | Ga0495630_0000007 | |||
| 364 | Ga0495630_0008466 | |||
| 365 | Ga0495644_0000253 | |||
| 366 | Ga0495587_0004726 | |||
| 367 | Ga0495598_0001743 | |||
| 368 | Ga0495621_0000503 | |||
| 369 | Ga0495634_0000187 | |||
| 370 | Ga0495634_0002006 | |||
| 371 | Ga0495657_0000002 | |||
| 372 | Ga0495599_0007873 | |||
| 373 | Ga0495647_0000059 | |||
| 374 | Ga0495647_0015279 | |||
| 375 | Ga0495658_0006255 | |||
| 376 | Ga0495669_0000163 | |||
| 377 | Ga0495613_0001313 | |||
| 378 | Ga0495624_0000207 | |||
| 379 | Ga0495670_0054376 | |||
| 380 | Ga0495649_0004195 | |||
| 381 | Ga0495604_0000033 | |||
| 382 | Ga0495604_0001650 | |||
| 383 | Ga0495604_0020460 | |||
| 384 | Ga0495676_0010013 | |||
| 385 | Ga0495676_0099808 | |||
| 386 | Ga0495680_0000286 | |||
| 387 | Ga0495680_0206688 | |||
| 388 | Ga0495675_0000228 | |||
| 389 | Ga0495602_0000010 | |||
| 390 | Ga0495602_0021123 | |||
| 391 | Ga0495614_0099922 | |||
| 392 | Ga0496100_0000003 | |||
| 393 | Ga0496100_0000008 | |||
| 394 | Ga0496101_0000003 | |||
| 395 | Ga0496101_0000016 | |||
| 396 | Ga0496101_0088610 | |||
| 397 | Ga0496103_0034593 | |||
| 398 | Ga0496104_0000063 | |||
| 399 | Ga0496104_0039940 | |||
| 400 | Ga0496104_0054023 | |||
| 401 | Ga0496105_0000041 | |||
| 402 | Ga0496106_0000048 | |||
| 403 | Ga0496106_0000085 | |||
| 404 | Ga0496107_0000008 | |||
| 405 | Ga0496107_0000009 | |||
| 406 | Ga0496108_0000024 | |||
| 407 | Ga0496108_0000153 | |||
| 408 | Ga0496108_0001788 | |||
| 409 | Ga0496108_0006319 | |||
| 410 | Ga0496109_0000033 | |||
| 411 | Ga0496109_0000267 | |||
| 412 | Ga0496109_0000809 | |||
| 413 | Ga0496109_0091388 | |||
| 414 | Ga0496109_0310701 | |||
| 415 | Ga0496110_0017576 | |||
| 416 | Ga0496110_0042075 | |||
| 417 | Ga0496111_0004510 | |||
| 418 | Ga0496112_0319185 | |||
| 419 | Ga0496113_0072027 | |||
| 420 | Ga0496113_0256332 | |||
| 421 | Ga0496114_0000010 | |||
| 422 | Ga0496114_0154222 | |||
| 423 | Ga0496115_0000074 | |||
| 424 | Ga0496115_0000212 | |||
| 425 | Ga0496116_0000014 | |||
| 426 | Ga0496117_0020774 | |||
| 427 | Ga0496118_0011810 | |||
| 428 | Ga0496120_0009734 | |||
| 429 | Ga0496121_0047226 | |||
| 430 | Ga0496126_0012061 | |||
| 431 | Ga0501031_0000396 | |||
| 432 | Ga0501032_0002773 | |||
| 433 | Ga0501033_0000211 | |||
| 434 | Ga0501034_0017057 | |||
| 435 | Ga0501036_0001187 | |||
| 436 | Ga0501037_0000120 | |||
| 437 | Ga0501038_0000139 | |||
| 438 | Ga0501042_0177681 | |||
| 439 | Ga0501043_0000203 | |||
| 440 | Ga0501046_0000194 | |||
| 441 | Ga0501047_0000287 | |||
| 442 | Ga0501047_0007840 | |||
| 443 | Ga0501047_0068816 | |||
| 444 | Ga0501048_0000004 | |||
| 445 | Ga0501068_0019061 | |||
| 446 | Ga0501069_0011133 | |||
| 447 | Ga0501070_0000079 | |||
| 448 | Ga0501070_0007349 | |||
| 449 | Ga0501073_0016332 | |||
| 450 | Ga0501074_0010531 | |||
| 451 | Ga0501079_0011759 | |||
| 452 | Ga0501080_0010668 | |||
| 453 | Ga0501083_0013189 | |||
| 454 | Ga0501083_0017745 | |||
| 455 | Ga0501035_0000059 | |||
| 456 | Ga0501044_0000417 | |||
| 457 | Ga0501045_0026644 | |||
| 458 | nmdc:mga0a205_9_c1 | |||
| 459 | Ga0495601_0000012 | |||
| 460 | Ga0495601_0000120 | |||
| 461 | Ga0495601_0051235 | |||
| 462 | Ga0495612_0000100 | |||
| 463 | Ga0495612_0000531 | |||
| 464 | Ga0495655_0000335 | |||
| 465 | Ga0495595_0000001 | |||
| 466 | Ga0495595_0000117 | |||
| 467 | Ga0495619_0000020 | |||
| 468 | Ga0495619_0000046 | |||
| 469 | Ga0495619_0000129 | |||
| 470 | Ga0501082_0077517 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5z68-assembly1.cif.gz_B | structure of the recombination mediator protein recf-atp in recfor pathway | 0.8845 | 2 | 353 |
| 5z68-assembly2.cif.gz_D | structure of the recombination mediator protein recf-atp in recfor pathway | 0.8668 | 2 | 338 |
| 8bpr-assembly1.cif.gz_B | complex of recf-reco-recr-dna from thermus thermophilus (low resolution reconstruction). | 0.8668 | 1 | 353 |
| 2o5v-assembly1.cif.gz_A | recombination mediator recf | 0.8645 | 2 | 353 |
| 5z68-assembly1.cif.gz_B | structure of the recombination mediator protein recf-atp in recfor pathway | 0.8572 | 2 | 353 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q2G275_120_311_1.20.1050.90 | Mainly Alpha;Up-down Bundle;Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2;RecF/RecN/SMC, N-terminal domain | 0.9455 | 123 | 303 | 1.20.1050.90 |
| 5zwuA02 | Mainly Alpha;Up-down Bundle;Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2;RecF/RecN/SMC, N-terminal domain | 0.9417 | 123 | 303 | 1.20.1050.90 |
| af_P9WHI9_120_320_1.20.1050.90 | Mainly Alpha;Up-down Bundle;Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2;RecF/RecN/SMC, N-terminal domain | 0.9291 | 123 | 303 | 1.20.1050.90 |
| 2o5vA02 | Mainly Alpha;Up-down Bundle;Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2;RecF/RecN/SMC, N-terminal domain | 0.928 | 123 | 303 | 1.20.1050.90 |
| 5zwuA02 | Mainly Alpha;Up-down Bundle;Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2;RecF/RecN/SMC, N-terminal domain | 0.9261 | 123 | 303 | 1.20.1050.90 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A538C040-F1-model_v4 | DNA replication and repair protein RecF | 0.9741 | 99 | 345 |
GO:0000731
GO:0003697 GO:0005524 GO:0005737 GO:0006260 GO:0006302 GO:0009432 |
| AF-A0A7C2UAJ0-F1-model_v4 | DNA replication and repair protein RecF | 0.9631 | 151 | 344 |
GO:0000731
GO:0003697 GO:0005524 GO:0005737 GO:0006260 GO:0006302 GO:0009432 |
| AF-A0A7X6TNC5-F1-model_v4 | DNA replication and repair protein RecF | 0.951 | 177 | 336 |
GO:0000731
GO:0003697 GO:0005524 GO:0005737 GO:0006260 GO:0006302 GO:0009432 |
| AF-A0A382I873-F1-model_v4 | DNA replication and repair protein RecF | 0.9437 | 174 | 341 |
GO:0000731
GO:0003697 GO:0005524 GO:0006302 |
| AF-A0A538F9X0-F1-model_v4 | DNA replication and repair protein RecF | 0.9435 | 146 | 344 |
GO:0000731
GO:0003697 GO:0005524 GO:0005737 GO:0006260 GO:0006302 GO:0009432 |