F348264

General Info

Members Datasets Scaffolds Average Seq Length
235 135 230 427

Family's Representative Sequence

Representative Sequence 3300031247|Ga0265340_10000208|Ga0265340_1000020817
Length 477
Sequence VLEHWSVALLQSQRNFPITPSLHHSITPIFPMNEISLQTRRQFLRTTVLGSALSWTVPAFLADTFTALHSQAADSATQIITGKDATILVVLQMAGGNDGLNTVVPYANDFYHRARPKLGLTAQKVLNLNGEIGLHGAMTGFKELFDSGNLAVVQGVGYPNPNRSHFRSTEIWQTASDAVKVEKYGWLGRYFDNCCAGADPTVGVTIGSQLPEAFFAKTLTGICFNNPQNYRFMANGRRSPDGTDLTEAAYEKMNEADMSGAAPDENAGGSIGALAAGMPMQGGKAVDFIERTALDAQVSSDEVRKIADRVQNQATYPASQFGNSLKLVAKLIGGGLPTRVYYVSQGGYDTHTNQIPTQQRLLGELGDSVKAFVDDLKAQGNLPRVLVMTFSEFGRRVSENANGGTDHGAAAPMFIVGNKVKAGLLGTYPSLAPQDLFEGDVKYNVDFRNVYAGVLESWLKTKSAPILGRPFEPLQLV

Samples

Sample ID Description Type Environment
1 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified
2 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
3 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
4 2920107658 Aquisphaera insulae JC669 Isolate Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
24 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
31 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
32 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
33 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
34 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
35 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
49 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
50 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
51 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
52 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
53 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
54 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
55 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
56 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
57 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
58 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
59 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
60 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
61 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
62 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
63 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
64 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
65 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
66 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
67 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
68 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
69 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
70 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
71 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
72 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
73 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
74 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
75 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
76 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
77 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
78 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
79 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
80 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
81 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
82 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
83 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
84 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
85 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
86 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
87 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
88 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
89 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
90 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
91 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
92 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
93 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
94 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
95 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
96 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
97 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
98 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
99 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
100 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
101 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
102 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
103 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
104 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
105 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
106 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
107 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
108 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
109 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
110 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
111 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
124 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
125 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
126 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
127 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
128 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
129 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
132 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
133 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
134 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
135 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.87
Metatranscriptomes 0
Isolates 2.13

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.7
Nodule 0
Rhizoplane 0.43
Rhizosphere 92.77
Stem 0
Stem Tuber 0
Unclassified 5.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10001376 3300005327 Bacteria 20803
2 Ga0070660_100029241 3300005339 Bacteria 4128
3 Ga0070688_100043849 3300005365 Unclassified 2758
4 Ga0070714_100003046 3300005435 Bacteria 12430
5 Ga0070713_100087077 3300005436 Unclassified 2679
6 Ga0070708_100053540 3300005445 Bacteria 3581
7 Ga0070708_100168063 3300005445 Bacteria 2046
8 Ga0070681_10035193 3300005458 Bacteria 5030
9 Ga0070706_100000325 3300005467 Bacteria 58031
10 Ga0070706_100142335 3300005467 Bacteria 2238
11 Ga0070707_100000320 3300005468 Bacteria 47282
12 Ga0070707_100043021 3300005468 Unclassified 4324
13 Ga0070707_100159364 3300005468 Bacteria 2198
14 Ga0070698_100001155 3300005471 Bacteria 29229
15 Ga0070698_100026738 3300005471 Bacteria 6003
16 Ga0070699_100082318 3300005518 Bacteria 2806
17 Ga0070699_100106416 3300005518 Unclassified 2461
18 Ga0070697_100015598 3300005536 Bacteria 5965
19 Ga0070697_100074063 3300005536 Bacteria 2797
20 Ga0070697_100121936 3300005536 Bacteria 2181
21 Ga0068853_100030747 3300005539 Bacteria 4537
22 Ga0068855_100118705 3300005563 Bacteria 3029
23 Ga0068855_100172585 3300005563 Bacteria 2448
24 Ga0068857_100008208 3300005577 Bacteria 9024
25 Ga0068859_100003547 3300005617 Bacteria 15891
26 Ga0068859_100093740 3300005617 Bacteria 3054
27 Ga0068858_100075061 3300005842 Bacteria 3140
28 Ga0068858_100322170 3300005842 Unclassified 1477
29 Ga0070717_10017189 3300006028 Bacteria 5622
30 Ga0070717_10098923 3300006028 Bacteria 2474
31 Ga0070716_100115715 3300006173 Bacteria 1670
32 Ga0075362_10031878 3300006177 Unclassified 2284
33 Ga0075428_100037293 3300006844 Bacteria 5352
34 Ga0097620_100003547 3300006931 Bacteria 15891
35 Ga0097620_100093743 3300006931 Bacteria 3054
36 Ga0105240_10019114 3300009093 Bacteria 9161
37 Ga0105242_10159528 3300009176 Unclassified 1973
38 Ga0105238_10000183 3300009551 Bacteria 68599
39 Ga0105238_10071196 3300009551 Bacteria 3474
40 Ga0105238_10125206 3300009551 Unclassified 2549
41 Ga0105238_10240436 3300009551 Bacteria 1788
42 Ga0157374_10407656 3300013296 Bacteria 1357
43 Ga0157372_10052931 3300013307 Bacteria 4522
44 Ga0157372_10399807 3300013307 Unclassified 1601
45 Ga0157372_10419702 3300013307 Unclassified 1559
46 Ga0213872_10004335 3300021361 Bacteria 7563
47 Ga0213872_10018599 3300021361 Bacteria 3202
48 Ga0213874_10012882 3300021377 Bacteria 2155
49 Ga0213876_10093663 3300021384 Bacteria 1591
50 Ga0207682_10039589 3300025893 Bacteria 1917
51 Ga0207684_10002490 3300025910 Bacteria 18526
52 Ga0207684_10074047 3300025910 Bacteria 2893
53 Ga0207684_10133402 3300025910 Unclassified 2132
54 Ga0207671_10000024 3300025914 Bacteria 274628
55 Ga0207657_10039849 3300025919 Bacteria 4169
56 Ga0207646_10001827 3300025922 Bacteria 25695
57 Ga0207646_10018145 3300025922 Bacteria 6569
58 Ga0207646_10099535 3300025922 Bacteria 2605
59 Ga0207646_10103548 3300025922 Unclassified 2553
60 Ga0207694_10000225 3300025924 Bacteria 54907
61 Ga0207694_10022873 3300025924 Unclassified 4742
62 Ga0207694_10131397 3300025924 Unclassified 2007
63 Ga0207694_10199879 3300025924 Unclassified 1626
64 Ga0207664_10004621 3300025929 Bacteria 9335
65 Ga0207665_10110016 3300025939 Bacteria 1935
66 Ga0207667_10027901 3300025949 Bacteria 6137
67 Ga0207667_10138744 3300025949 Bacteria 2503
68 Ga0207667_10302439 3300025949 Unclassified 1634
69 Ga0207703_10051859 3300026035 Bacteria 3328
70 Ga0207639_10011697 3300026041 Bacteria 6102
71 Ga0207702_10003267 3300026078 Bacteria 14964
72 Ga0207702_10007642 3300026078 Bacteria 9200
73 Ga0207674_10013298 3300026116 Bacteria 9141
74 Ga0265337_1000732 3300028556 Bacteria 17267
75 Ga0265337_1006575 3300028556 Unclassified 4460
76 Ga0265326_10002133 3300028558 Bacteria 6737
77 Ga0265319_1000001 3300028563 Bacteria 549513
78 Ga0265319_1023207 3300028563 Unclassified 2250
79 Ga0265334_10004469 3300028573 Bacteria 6204
80 Ga0265338_10000009 3300028800 Bacteria 448611
81 Ga0265338_10000487 3300028800 Bacteria 70806
82 Ga0265338_10001092 3300028800 Bacteria 45086
83 Ga0265338_10001270 3300028800 Bacteria 41574
84 Ga0265338_10001932 3300028800 Bacteria 32332
85 Ga0265338_10002671 3300028800 Bacteria 26214
86 Ga0265338_10003037 3300028800 Bacteria 24157
87 Ga0265338_10006900 3300028800 Bacteria 14286
88 Ga0265338_10007439 3300028800 Bacteria 13594
89 Ga0265338_10012683 3300028800 Bacteria 9591
90 Ga0265338_10027275 3300028800 Bacteria 5733
91 Ga0265338_10028448 3300028800 Bacteria 5573
92 Ga0265338_10036138 3300028800 Bacteria 4734
93 Ga0265338_10043346 3300028800 Bacteria 4175
94 Ga0265338_10063096 3300028800 Unclassified 3233
95 Ga0265338_10085670 3300028800 Bacteria 2625
96 Ga0265338_10103199 3300028800 Bacteria 2317
97 Ga0265338_10192491 3300028800 Bacteria 1545
98 Ga0265324_10000643 3300029957 Bacteria 23712
99 Ga0265332_10005963 3300031238 Bacteria 5569
100 Ga0265320_10034643 3300031240 Unclassified 2566
101 Ga0265320_10053311 3300031240 Bacteria 1955
102 Ga0265325_10001676 3300031241 Bacteria 15374
103 Ga0265340_10000208 3300031247 Bacteria 29683
104 Ga0265340_10008711 3300031247 Bacteria 5474
105 Ga0265340_10009207 3300031247 Bacteria 5307
106 Ga0265339_10000707 3300031249 Bacteria 25871
107 Ga0265339_10004641 3300031249 Bacteria 9341
108 Ga0265331_10000102 3300031250 Bacteria 115584
109 Ga0265327_10001745 3300031251 Bacteria 25747
110 Ga0265327_10031827 3300031251 Bacteria 2960
111 Ga0265316_10010208 3300031344 Bacteria 8573
112 Ga0265316_10045778 3300031344 Bacteria 3471
113 Ga0265313_10000205 3300031595 Bacteria 63526
114 Ga0265313_10001093 3300031595 Bacteria 26113
115 Ga0265313_10002321 3300031595 Bacteria 16672
116 Ga0265314_10000258 3300031711 Bacteria 77755
117 Ga0265314_10041811 3300031711 Bacteria 3276
118 Ga0265342_10000848 3300031712 Bacteria 30520
119 Ga0265342_10014010 3300031712 Bacteria 5340
120 Ga0307410_10028429 3300031852 Bacteria 3547
121 Ga0373928_0001098 3300035084 Bacteria 5350
122 Ga0373944_0004340 3300035089 Unclassified 3689
123 Ga0373949_0001856 3300035090 Bacteria 5744
124 Ga0373932_0000002 3300035112 Bacteria 711821
125 Ga0373953_0009104 3300035117 Bacteria 3398
126 Ga0373956_0023605 3300035119 Bacteria 2641
127 Ga0373962_0001071 3300035242 Bacteria 6369
128 Ga0373931_0000012 3300035691 Bacteria 267735
129 Ga0373935_0108016 3300035692 Unclassified 1843
130 Ga0373927_0006504 3300035695 Bacteria 7960
131 Ga0373927_0007075 3300035695 Bacteria 7609
132 Ga0373933_0018382 3300035724 Bacteria 3930
133 Ga0373947_0044213 3300035725 Bacteria 2661
134 Ga0373925_0000233 3300037068 Bacteria 58605
135 Ga0373925_0003665 3300037068 Bacteria 11821
136 Ga0373925_0101084 3300037068 Bacteria 2217
137 Ga0395900_0002310 3300037418 Bacteria 21155
138 Ga0395898_0002814 3300037466 Bacteria 19954
139 Ga0436364_0707420 3300037853 Bacteria 1301
140 Ga0436365_0052359 3300039437 Bacteria 4031
141 Ga0436365_0155667 3300039437 Bacteria 1892
142 Ga0436365_0637418 3300039437 Bacteria 12764
143 Ga0436365_1647090 3300039437 Bacteria 3178
144 Ga0436365_1934520 3300039437 Bacteria 3833
145 Ga0436360_0085938 3300039438 Unclassified 2180
146 Ga0436360_1182291 3300039438 Bacteria 3075
147 Ga0436361_0084969 3300039447 Bacteria 1639
148 Ga0436361_0814899 3300039447 Unclassified 1496
149 Ga0436361_0974851 3300039447 Bacteria 7238
150 Ga0436361_1004568 3300039447 Bacteria 2043
151 Ga0436363_1565537 3300039450 Bacteria 41300
152 Ga0436362_1185837 3300039453 Bacteria 2299
153 Ga0451577_0003992 3300042876 Bacteria 15889
154 Ga0451577_0031996 3300042876 Bacteria 4741
155 Ga0453683_0034509 3300044673 Bacteria 3190
156 Ga0451576_0000141 3300045051 Bacteria 183004
157 Ga0451576_0153158 3300045051 Bacteria 2404
158 Ga0451576_0173567 3300045051 Bacteria 2250
159 Ga0451576_0324784 3300045051 Bacteria 1610
160 Ga0495592_0001048 3300046454 Bacteria 19187
161 Ga0495629_0007237 3300046459 Bacteria 8173
162 Ga0495582_0008725 3300046473 Bacteria 5590
163 Ga0495608_0010732 3300046511 Bacteria 6387
164 Ga0495608_0011584 3300046511 Bacteria 6136
165 Ga0495618_0003395 3300046514 Bacteria 9912
166 Ga0495628_0000246 3300046516 Bacteria 47770
167 Ga0495628_0091998 3300046516 Unclassified 2347
168 Ga0495630_0000055 3300046517 Bacteria 91568
169 Ga0495630_0004003 3300046517 Bacteria 10310
170 Ga0495652_0052657 3300046529 Unclassified 3471
171 Ga0495652_0076809 3300046529 Bacteria 2770
172 Ga0495640_0057854 3300046533 Bacteria 2645
173 Ga0495586_0001538 3300046535 Bacteria 12729
174 Ga0495586_0007228 3300046535 Bacteria 5924
175 Ga0495586_0024657 3300046535 Bacteria 3217
176 Ga0495645_0047234 3300046543 Bacteria 3137
177 Ga0495645_0071227 3300046543 Bacteria 2507
178 Ga0495634_0003725 3300046642 Bacteria 12144
179 Ga0495635_0010465 3300046663 Bacteria 6488
180 Ga0495599_0011230 3300046678 Bacteria 5500
181 Ga0495599_0036862 3300046678 Unclassified 3072
182 Ga0495647_0011535 3300046681 Unclassified 3029
183 Ga0495613_0001643 3300046689 Bacteria 17024
184 Ga0495604_0068007 3300047317 Bacteria 2705
185 Ga0495674_0007959 3300047319 Bacteria 10119
186 Ga0495674_0085205 3300047319 Bacteria 2707
187 Ga0495674_0129940 3300047319 Unclassified 2122
188 Ga0495674_0240938 3300047319 Unclassified 1490
189 Ga0495680_0002831 3300047322 Bacteria 17453
190 Ga0495680_0153548 3300047322 Unclassified 1677
191 Ga0495675_0065850 3300047444 Bacteria 2291
192 Ga0495675_0234920 3300047444 Bacteria 1105
193 Ga0496107_0026080 3300048910 Bacteria 4142
194 Ga0501031_0000192 3300049568 Bacteria 34424
195 Ga0501032_0000735 3300049569 Bacteria 26625
196 Ga0501033_0091357 3300049570 Bacteria 2227
197 Ga0501034_0010961 3300049571 Bacteria 9415
198 Ga0501034_0226150 3300049571 Bacteria 1822
199 Ga0501036_0002739 3300049572 Bacteria 13935
200 Ga0501037_0068109 3300049573 Unclassified 2591
201 Ga0501038_0019921 3300049574 Bacteria 6038
202 Ga0501039_0004589 3300049575 Bacteria 10446
203 Ga0501043_0005005 3300049579 Bacteria 10725
204 Ga0501043_0058563 3300049579 Bacteria 3024
205 Ga0501043_0301163 3300049579 Bacteria 1225
206 Ga0501046_0032280 3300049580 Bacteria 4240
207 Ga0501047_0001002 3300049581 Bacteria 28491
208 Ga0501047_0002818 3300049581 Bacteria 16500
209 Ga0501048_0005121 3300049582 Bacteria 9988
210 Ga0501070_0010634 3300049586 Bacteria 7777
211 Ga0501073_0000302 3300049589 Bacteria 32545
212 Ga0501073_0213345 3300049589 Bacteria 1334
213 Ga0501074_0003934 3300049590 Bacteria 10588
214 Ga0501080_0021078 3300049742 Bacteria 6032
215 Ga0501081_0063321 3300049743 Bacteria 2567
216 Ga0501083_0000211 3300049744 Bacteria 37931
217 Ga0501035_0005047 3300049822 Bacteria 12503
218 Ga0501035_0005274 3300049822 Bacteria 12234
219 Ga0501035_0020238 3300049822 Bacteria 6111
220 Ga0501035_0070412 3300049822 Unclassified 3098
221 Ga0501044_0000176 3300049823 Bacteria 79132
222 Ga0501044_0002402 3300049823 Bacteria 21355
223 Ga0501044_0038920 3300049823 Bacteria 4965
224 Ga0501044_0093011 3300049823 Bacteria 3041
225 Ga0501045_0015634 3300049824 Bacteria 5384
226 nmdc:mga0n895_321475_c1 3300050512 Unclassified 1568
227 Ga0495601_0000543 3300053077 Bacteria 19942
228 Ga0500555_000011 3300053103 Bacteria 259962
229 Ga0500616_0000052 3300053153 Bacteria 295313
230 Ga0500616_0000683 3300053153 Bacteria 39775

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300047444 Ga0495675_0234920 Ga0495675_0234920_38_1042 298
2 3300013296 Ga0157374_10407656 Ga0157374_104076561 330
3 3300049823 Ga0501044_0093011 Ga0501044_0093011_1043_2425 341
4 3300049579 Ga0501043_0301163 Ga0501043_0301163_74_1207 346
5 3300039447 Ga0436361_0084969 Ga0436361_0084969_20_1174 358
6 3300039447 Ga0436361_0814899 Ga0436361_0814899_20_1174 358
7 3300039437 Ga0436365_0155667 Ga0436365_0155667_318_1724 362
8 iso_pu_bacteria 2920107658 2920112183 367
9 3300009551 Ga0105238_10000183 Ga0105238_1000018319 368
10 3300025924 Ga0207694_10000225 Ga0207694_1000022520 368
11 3300021361 Ga0213872_10018599 Ga0213872_100185992 369
12 3300037853 Ga0436364_0707420 Ga0436364_0707420_22_1218 369
13 3300005539 Ga0068853_100030747 Ga0068853_1000307472 370
14 3300026041 Ga0207639_10011697 Ga0207639_100116972 370
15 3300005563 Ga0068855_100172585 Ga0068855_1001725853 371
16 3300049569 Ga0501032_0000735 Ga0501032_0000735_3527_4726 372
17 3300049571 Ga0501034_0010961 Ga0501034_0010961_7929_9128 372
18 3300049572 Ga0501036_0002739 Ga0501036_0002739_12418_13617 372
19 3300049573 Ga0501037_0068109 Ga0501037_0068109_447_1646 372
20 3300049574 Ga0501038_0019921 Ga0501038_0019921_174_1373 372
21 3300049575 Ga0501039_0004589 Ga0501039_0004589_7527_8726 372
22 3300049579 Ga0501043_0005005 Ga0501043_0005005_4771_5970 372
23 3300049581 Ga0501047_0002818 Ga0501047_0002818_5615_6814 372
24 3300049582 Ga0501048_0005121 Ga0501048_0005121_7427_8626 372
25 3300049586 Ga0501070_0010634 Ga0501070_0010634_168_1367 372
26 3300049589 Ga0501073_0000302 Ga0501073_0000302_7929_9128 372
27 3300049590 Ga0501074_0003934 Ga0501074_0003934_1659_2858 372
28 3300049742 Ga0501080_0021078 Ga0501080_0021078_206_1405 372
29 3300049744 Ga0501083_0000211 Ga0501083_0000211_1557_2756 372
30 3300049822 Ga0501035_0005274 Ga0501035_0005274_5406_6605 372
31 3300049823 Ga0501044_0002402 Ga0501044_0002402_3990_5189 372
32 3300049824 Ga0501045_0015634 Ga0501045_0015634_1630_2829 372
33 3300013307 Ga0157372_10399807 Ga0157372_103998072 373
34 3300013307 Ga0157372_10419702 Ga0157372_104197021 373
35 3300031852 Ga0307410_10028429 Ga0307410_100284292 373
36 3300046511 Ga0495608_0011584 Ga0495608_0011584_25_1254 373
37 iso_pu_bacteria 2920107658 2920111047 375
38 3300031251 Ga0265327_10031827 Ga0265327_100318272 377
39 iso_pu_bacteria 2684623219 2687237967 377
40 3300006028 Ga0070717_10098923 Ga0070717_100989232 379
41 3300028800 Ga0265338_10006900 Ga0265338_100069004 379
42 3300031238 Ga0265332_10005963 Ga0265332_100059632 379
43 3300031241 Ga0265325_10001676 Ga0265325_100016761 379
44 3300031249 Ga0265339_10000707 Ga0265339_100007076 379
45 3300031250 Ga0265331_10000102 Ga0265331_1000010273 379
46 3300031595 Ga0265313_10000205 Ga0265313_100002059 379
47 3300031711 Ga0265314_10000258 Ga0265314_1000025848 379
48 3300031712 Ga0265342_10000848 Ga0265342_100008488 379
49 3300046511 Ga0495608_0010732 Ga0495608_0010732_4599_5807 379
50 3300047317 Ga0495604_0068007 Ga0495604_0068007_68_1276 379
51 3300047444 Ga0495675_0065850 Ga0495675_0065850_80_1294 379
52 3300053077 Ga0495601_0000543 Ga0495601_0000543_3316_4524 379
53 3300006844 Ga0075428_100037293 Ga0075428_1000372932 380
54 3300025949 Ga0207667_10027901 Ga0207667_100279013 383
55 3300049743 Ga0501081_0063321 Ga0501081_0063321_417_1667 384
56 3300006177 Ga0075362_10031878 Ga0075362_100318782 385
57 iso_pu_bacteria 2840677318 2840679223 385
58 iso_pu_bacteria 2896085136 2896087034 385
59 3300005468 Ga0070707_100043021 Ga0070707_1000430211 386
60 3300005471 Ga0070698_100026738 Ga0070698_1000267384 386
61 3300005518 Ga0070699_100106416 Ga0070699_1001064162 386
62 3300005536 Ga0070697_100015598 Ga0070697_1000155984 386
63 3300025922 Ga0207646_10018145 Ga0207646_100181453 386
64 3300053103 Ga0500555_000011 Ga0500555_000011_96421_97764 387
65 3300028800 Ga0265338_10001092 Ga0265338_1000109220 389
66 3300029957 Ga0265324_10000643 Ga0265324_100006438 389
67 3300005468 Ga0070707_100000320 Ga0070707_10000032030 391
68 3300025922 Ga0207646_10001827 Ga0207646_1000182712 391
69 3300025924 Ga0207694_10022873 Ga0207694_100228732 393
70 3300049589 Ga0501073_0213345 Ga0501073_0213345_35_1300 393
71 3300053153 Ga0500616_0000052 Ga0500616_0000052_30088_31320 394
72 3300049580 Ga0501046_0032280 Ga0501046_0032280_65_1297 395
73 3300049581 Ga0501047_0001002 Ga0501047_0001002_3056_4288 395
74 3300005435 Ga0070714_100003046 Ga0070714_1000030462 398
75 3300005445 Ga0070708_100168063 Ga0070708_1001680632 398
76 3300005467 Ga0070706_100000325 Ga0070706_1000003255 398
77 3300005467 Ga0070706_100142335 Ga0070706_1001423352 398
78 3300005471 Ga0070698_100001155 Ga0070698_10000115522 398
79 3300005563 Ga0068855_100118705 Ga0068855_1001187051 398
80 3300005617 Ga0068859_100003547 Ga0068859_1000035472 398
81 3300005842 Ga0068858_100075061 Ga0068858_1000750613 398
82 3300006028 Ga0070717_10017189 Ga0070717_100171892 398
83 3300006173 Ga0070716_100115715 Ga0070716_1001157152 398
84 3300006931 Ga0097620_100003547 Ga0097620_1000035472 398
85 3300009551 Ga0105238_10240436 Ga0105238_102404361 398
86 3300021361 Ga0213872_10004335 Ga0213872_100043357 398
87 3300021377 Ga0213874_10012882 Ga0213874_100128822 398
88 3300025910 Ga0207684_10002490 Ga0207684_1000249019 398
89 3300025910 Ga0207684_10133402 Ga0207684_101334021 398
90 3300025929 Ga0207664_10004621 Ga0207664_100046214 398
91 3300025939 Ga0207665_10110016 Ga0207665_101100161 398
92 3300025949 Ga0207667_10302439 Ga0207667_103024391 398
93 3300026035 Ga0207703_10051859 Ga0207703_100518592 398
94 3300026078 Ga0207702_10003267 Ga0207702_100032675 398
95 3300026078 Ga0207702_10007642 Ga0207702_100076426 398
96 3300031251 Ga0265327_10001745 Ga0265327_1000174516 398
97 3300035084 Ga0373928_0001098 Ga0373928_0001098_1216_2538 398
98 3300035089 Ga0373944_0004340 Ga0373944_0004340_2191_3513 398
99 3300035090 Ga0373949_0001856 Ga0373949_0001856_3546_4868 398
100 3300035112 Ga0373932_0000002 Ga0373932_0000002_229463_230785 398
101 3300035242 Ga0373962_0001071 Ga0373962_0001071_3749_5071 398
102 3300035691 Ga0373931_0000012 Ga0373931_0000012_229482_230804 398
103 3300035692 Ga0373935_0108016 Ga0373935_0108016_218_1540 398
104 3300035695 Ga0373927_0007075 Ga0373927_0007075_4424_5746 398
105 3300035725 Ga0373947_0044213 Ga0373947_0044213_267_1589 398
106 3300037068 Ga0373925_0000233 Ga0373925_0000233_2808_4130 398
107 3300039437 Ga0436365_1647090 Ga0436365_1647090_1394_2695 398
108 3300039438 Ga0436360_0085938 Ga0436360_0085938_798_2099 398
109 3300039438 Ga0436360_1182291 Ga0436360_1182291_282_1583 398
110 3300039447 Ga0436361_0974851 Ga0436361_0974851_5015_6316 398
111 3300039447 Ga0436361_1004568 Ga0436361_1004568_343_1644 398
112 3300039450 Ga0436363_1565537 Ga0436363_1565537_34276_35577 398
113 3300039453 Ga0436362_1185837 Ga0436362_1185837_292_1593 398
114 3300047322 Ga0495680_0153548 Ga0495680_0153548_271_1590 398
115 3300049568 Ga0501031_0000192 Ga0501031_0000192_6934_8253 398
116 3300049579 Ga0501043_0058563 Ga0501043_0058563_953_2272 398
117 3300049822 Ga0501035_0005047 Ga0501035_0005047_4584_5903 398
118 3300049822 Ga0501035_0020238 Ga0501035_0020238_663_1982 398
119 3300049823 Ga0501044_0000176 Ga0501044_0000176_51880_53199 398
120 3300049823 Ga0501044_0038920 Ga0501044_0038920_1971_3290 398
121 3300005436 Ga0070713_100087077 Ga0070713_1000870772 399
122 3300039437 Ga0436365_1934520 Ga0436365_1934520_729_1955 399
123 3300045051 Ga0451576_0000141 Ga0451576_0000141_170150_171502 399
124 3300049570 Ga0501033_0091357 Ga0501033_0091357_504_1829 399
125 3300049571 Ga0501034_0226150 Ga0501034_0226150_279_1604 399
126 3300009551 Ga0105238_10125206 Ga0105238_101252062 400
127 3300028563 Ga0265319_1000001 Ga0265319_100000130 400
128 3300028563 Ga0265319_1023207 Ga0265319_10232072 400
129 3300028800 Ga0265338_10012683 Ga0265338_100126832 400
130 3300028800 Ga0265338_10036138 Ga0265338_100361383 400
131 3300031240 Ga0265320_10034643 Ga0265320_100346432 400
132 3300031595 Ga0265313_10002321 Ga0265313_100023215 400
133 3300035695 Ga0373927_0006504 Ga0373927_0006504_3051_4409 400
134 3300037068 Ga0373925_0003665 Ga0373925_0003665_799_2157 400
135 3300049822 Ga0501035_0070412 Ga0501035_0070412_297_1643 400
136 3300005365 Ga0070688_100043849 Ga0070688_1000438492 401
137 3300005842 Ga0068858_100322170 Ga0068858_1003221701 401
138 3300021384 Ga0213876_10093663 Ga0213876_100936632 401
139 3300025924 Ga0207694_10199879 Ga0207694_101998791 401
140 3300028556 Ga0265337_1000732 Ga0265337_10007326 401
141 3300028573 Ga0265334_10004469 Ga0265334_100044694 401
142 3300028800 Ga0265338_10027275 Ga0265338_100272753 401
143 3300028800 Ga0265338_10028448 Ga0265338_100284485 401
144 3300028800 Ga0265338_10043346 Ga0265338_100433462 401
145 3300028800 Ga0265338_10085670 Ga0265338_100856704 401
146 3300031247 Ga0265340_10008711 Ga0265340_100087112 401
147 3300031247 Ga0265340_10009207 Ga0265340_100092074 401
148 3300035117 Ga0373953_0009104 Ga0373953_0009104_1875_3206 401
149 3300035119 Ga0373956_0023605 Ga0373956_0023605_1096_2427 401
150 3300039437 Ga0436365_0052359 Ga0436365_0052359_1601_2830 401
151 3300039437 Ga0436365_0637418 Ga0436365_0637418_3816_5048 401
152 3300045051 Ga0451576_0173567 Ga0451576_0173567_283_1605 401
153 3300046473 Ga0495582_0008725 Ga0495582_0008725_776_2101 401
154 3300046516 Ga0495628_0000246 Ga0495628_0000246_37583_38908 401
155 3300046516 Ga0495628_0091998 Ga0495628_0091998_147_1478 401
156 3300046517 Ga0495630_0000055 Ga0495630_0000055_6015_7340 401
157 3300046529 Ga0495652_0052657 Ga0495652_0052657_665_1996 401
158 3300046543 Ga0495645_0047234 Ga0495645_0047234_1678_3003 401
159 3300046678 Ga0495599_0011230 Ga0495599_0011230_2373_3704 401
160 3300047319 Ga0495674_0007959 Ga0495674_0007959_789_2114 401
161 3300047319 Ga0495674_0240938 Ga0495674_0240938_119_1450 401
162 3300048910 Ga0496107_0026080 Ga0496107_0026080_28_1350 401
163 3300005458 Ga0070681_10035193 Ga0070681_100351932 402
164 3300005577 Ga0068857_100008208 Ga0068857_1000082082 402
165 3300005617 Ga0068859_100093740 Ga0068859_1000937402 402
166 3300006931 Ga0097620_100093743 Ga0097620_1000937432 402
167 3300009093 Ga0105240_10019114 Ga0105240_100191143 402
168 3300025893 Ga0207682_10039589 Ga0207682_100395891 402
169 3300025949 Ga0207667_10138744 Ga0207667_101387442 402
170 3300026116 Ga0207674_10013298 Ga0207674_100132983 402
171 3300028556 Ga0265337_1006575 Ga0265337_10065754 402
172 3300028800 Ga0265338_10000487 Ga0265338_1000048718 402
173 3300028800 Ga0265338_10001270 Ga0265338_1000127032 402
174 3300028800 Ga0265338_10001932 Ga0265338_100019325 402
175 3300028800 Ga0265338_10002671 Ga0265338_100026715 402
176 3300028800 Ga0265338_10003037 Ga0265338_100030372 402
177 3300028800 Ga0265338_10007439 Ga0265338_100074397 402
178 3300028800 Ga0265338_10063096 Ga0265338_100630962 402
179 3300028800 Ga0265338_10103199 Ga0265338_101031991 402
180 3300031240 Ga0265320_10053311 Ga0265320_100533111 402
181 3300031249 Ga0265339_10004641 Ga0265339_100046416 402
182 3300031344 Ga0265316_10010208 Ga0265316_100102088 402
183 3300031595 Ga0265313_10001093 Ga0265313_1000109320 402
184 3300031712 Ga0265342_10014010 Ga0265342_100140104 402
185 3300035724 Ga0373933_0018382 Ga0373933_0018382_409_1746 402
186 3300042876 Ga0451577_0003992 Ga0451577_0003992_13614_14945 402
187 3300042876 Ga0451577_0031996 Ga0451577_0031996_2123_3448 402
188 3300045051 Ga0451576_0153158 Ga0451576_0153158_1017_2351 402
189 3300046454 Ga0495592_0001048 Ga0495592_0001048_11232_12560 402
190 3300046459 Ga0495629_0007237 Ga0495629_0007237_888_2225 402
191 3300046514 Ga0495618_0003395 Ga0495618_0003395_4626_5963 402
192 3300046517 Ga0495630_0004003 Ga0495630_0004003_1631_2959 402
193 3300046529 Ga0495652_0076809 Ga0495652_0076809_1208_2536 402
194 3300046533 Ga0495640_0057854 Ga0495640_0057854_263_1591 402
195 3300046535 Ga0495586_0001538 Ga0495586_0001538_4150_5487 402
196 3300046535 Ga0495586_0007228 Ga0495586_0007228_1651_2979 402
197 3300046535 Ga0495586_0024657 Ga0495586_0024657_1356_2687 402
198 3300046543 Ga0495645_0071227 Ga0495645_0071227_976_2301 402
199 3300046642 Ga0495634_0003725 Ga0495634_0003725_1971_3308 402
200 3300046663 Ga0495635_0010465 Ga0495635_0010465_1824_3161 402
201 3300046678 Ga0495599_0036862 Ga0495599_0036862_1174_2499 402
202 3300046681 Ga0495647_0011535 Ga0495647_0011535_355_1692 402
203 3300046689 Ga0495613_0001643 Ga0495613_0001643_7610_8947 402
204 3300047319 Ga0495674_0085205 Ga0495674_0085205_937_2274 402
205 3300047319 Ga0495674_0129940 Ga0495674_0129940_241_1569 402
206 3300047322 Ga0495680_0002831 Ga0495680_0002831_427_1764 402
207 3300050512 nmdc:mga0n895_321475_c1 nmdc:mga0n895_321475_c1_197_1519 402
208 3300005536 Ga0070697_100121936 Ga0070697_1001219363 403
209 3300028558 Ga0265326_10002133 Ga0265326_100021335 403
210 3300028800 Ga0265338_10000009 Ga0265338_10000009362 403
211 3300031247 Ga0265340_10000208 Ga0265340_1000020817 403
212 3300005445 Ga0070708_100053540 Ga0070708_1000535402 404
213 3300005468 Ga0070707_100159364 Ga0070707_1001593642 404
214 3300005518 Ga0070699_100082318 Ga0070699_1000823182 404
215 3300005536 Ga0070697_100074063 Ga0070697_1000740631 404
216 3300009176 Ga0105242_10159528 Ga0105242_101595283 404
217 3300013307 Ga0157372_10052931 Ga0157372_100529313 404
218 3300025910 Ga0207684_10074047 Ga0207684_100740473 404
219 3300025922 Ga0207646_10099535 Ga0207646_100995352 404
220 3300025922 Ga0207646_10103548 Ga0207646_101035482 404
221 3300028800 Ga0265338_10192491 Ga0265338_101924911 404
222 3300031344 Ga0265316_10045778 Ga0265316_100457782 404
223 3300031711 Ga0265314_10041811 Ga0265314_100418112 404
224 3300037068 Ga0373925_0101084 Ga0373925_0101084_122_1456 404
225 3300044673 Ga0453683_0034509 Ga0453683_0034509_930_2225 404
226 3300045051 Ga0451576_0324784 Ga0451576_0324784_131_1468 404
227 3300053153 Ga0500616_0000683 Ga0500616_0000683_22594_23940 404
228 3300009551 Ga0105238_10071196 Ga0105238_100711962 407
229 3300025914 Ga0207671_10000024 Ga0207671_1000002427 407
230 3300025924 Ga0207694_10131397 Ga0207694_101313971 407
231 3300005327 Ga0070658_10001376 Ga0070658_1000137617 411
232 3300005339 Ga0070660_100029241 Ga0070660_1000292412 411
233 3300025919 Ga0207657_10039849 Ga0207657_100398492 411
234 3300037418 Ga0395900_0002310 Ga0395900_0002310_15393_16628 411
235 3300037466 Ga0395898_0002814 Ga0395898_0002814_3399_4634 411

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07394

DUF1501

Protein of unknown function (DUF1501)

85

467

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nkp-assembly1.cif.gz_A crystal structure of mouse autotaxin in complex with 18:1-lpa 0.6999 249 332
3nkq-assembly1.cif.gz_A crystal structure of mouse autotaxin in complex with 18:3-lpa 0.6991 249 332
7z3l-assembly1.cif.gz_AAA autotaxin in complex with hybrid compound ziritaxestat (glpg1690) 0.6898 248 332
7p4j-assembly1.cif.gz_A crystal structure of autotaxin and tetrahydrocannabinol 0.6627 251 332
5ijq-assembly1.cif.gz_A crystal structure of autotaxin (enpp2) re-refined 0.6289 238 332
ID Description Score Start End Superfamily
af_Q55G42_28_396_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.5966 255 316 3.20.20.210
af_Q19870_53_345_3.40.720.10 Alpha Beta;3-Layer(aba) Sandwich;Alkaline Phosphatase, subunit A;Alkaline Phosphatase, subunit A 0.5851 49 390 3.40.720.10
af_Q19963_189_388_3.40.720.10 Alpha Beta;3-Layer(aba) Sandwich;Alkaline Phosphatase, subunit A;Alkaline Phosphatase, subunit A 0.5701 48 351 3.40.720.10
af_A1ZB84_62_350_3.40.720.10 Alpha Beta;3-Layer(aba) Sandwich;Alkaline Phosphatase, subunit A;Alkaline Phosphatase, subunit A 0.5678 33 402 3.40.720.10
af_P0AD27_254_505_3.40.720.10 Alpha Beta;3-Layer(aba) Sandwich;Alkaline Phosphatase, subunit A;Alkaline Phosphatase, subunit A 0.5652 42 395 3.40.720.10
ID Description Score Start End GO Terms
AF-A0A535QD82-F1-model_v4 DUF1501 domain-containing protein 0.9827 305 411
AF-A0A7Z9JYI5-F1-model_v4 DUF1501 domain-containing protein 0.9712 284 411
AF-A0A537J6R2-F1-model_v4 DUF1501 domain-containing protein 0.969 251 411
AF-A0A538FAT5-F1-model_v4 DUF1501 domain-containing protein 0.958 247 411
AF-A0A4Q3RYH2-F1-model_v4 DUF1501 domain-containing protein 0.9374 234 411

Feature Viewer

pLDDT pTM Quality
78.19 0.81 High
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Predicted Structure (AlphaFold2)

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