F347651

General Info

Members Datasets Scaffolds Average Seq Length
234 227 37 446

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8057874678|8057880383
Length 502
Sequence IERRRELSTGIEMTGSMMADGEKSTPACKRGIASDREGHEREIRAHHLADGDESHLGIAAQTTMTKYCEAHLPWYTIYPTVSQFSPAVGANASGEWLRDMPADDTVSLYLHIPFCRSMCWYCGFPVSITRRDASVLNYLAVLREEIRLVSEQAPQGLPVSDVHFGGGTPAIMPPAEFLALMELLRSYFAFKKAITVAVEIDPRTFTSEMAEAFESAGVNRASLGVQSFDPTVQQAINRVQTETQVAAAAENLRRHGIVRINFDLMYGLPHQTVQSCVQSAKTAVAMRPQRLAVFGYAHVPSYRKNQRLIEEAALPDMAARAEQAAAVADTLVSAGYRQIGLDHFALPNDELALAQKAGRLRRNSLGYSADTCQMLIGFGASAISRLGEGYVQNELAQSSYTRHISAGHLATSQGYRLTGEDRVRAAIIEQLMCNLEADVPAICAAHEFAPIPIFDSAGRLARLAEDGVVDIANGFVRVRQEHRFVLRAVAAAFDPYLDRLPD

Samples

Sample ID Description Type Environment
1 2508501050 Microvirga lupini Lut6 Isolate Nodule
2 2508501122 Ensifer yinggardensis WSM1721 Isolate Nodule
3 2508501123 Mesorhizobium sp. WSM3626 Isolate Nodule
4 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
5 2509276019 Ensifer aridi TW10 Isolate Nodule
6 2509276022 Mesorhizobium australicum WSM2073 Isolate Nodule
7 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
8 2512875024 Mesorhizobium loti R88b Isolate Nodule
9 2513237088 Rhizobium mesoamericanum STM6155 Isolate Nodule
10 2513237090 Mesorhizobium sp. WSM3224 Isolate Nodule
11 2513237094 Bradyrhizobium sp. WSM3983 Isolate Nodule
12 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
13 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
14 2513237138 Rhizobium favelukesii OR191 Isolate Nodule
15 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
16 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
17 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
18 2513237164 Mesorhizobium loti CJ3sym Isolate Nodule
19 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
20 2515154107 Sinorhizobium meliloti 4H41 Isolate Nodule
21 2516143018 Ensifer sp. BR816 Isolate Nodule
22 2516653085 Rhizobium leguminosarum bv. phaseoli 4292 Isolate Nodule
23 2517093001 Bradyrhizobium japonicum USDA 124 Isolate Nodule
24 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
25 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
26 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
27 2528768022 Bradyrhizobium japonicum USDA 123 Isolate Nodule
28 2558860100 Sinorhizobium sp. PC2 Isolate Nodule
29 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
30 2615840624 Rhizobium aethiopicum HBR26 Isolate Nodule
31 2687453392 Mesorhizobium ciceri biserrulae WSM1284 Isolate Unclassified
32 2718217927 Rhizobium sp. N324 Isolate Nodule
33 2718218009 Rhizobium sp. N561 Isolate Nodule
34 2718218199 Rhizobium phaseoli sv. phaseoli N261 Isolate Nodule
35 2718218235 Rhizobium phaseoli sv. phaseoli R620 Isolate Nodule
36 2718218269 Rhizobium phaseoli sv. phaseoli N671 Isolate Nodule
37 2718218363 Rhizobium sp. N113 Isolate Nodule
38 2718218365 Rhizobium sp. N731 Isolate Nodule
39 2718218366 Rhizobium sp. N621 Isolate Nodule
40 2721755514 Rhizobium sp. N6212 Isolate Nodule
41 2721755556 Rhizobium phaseoli sv. phaseoli N931 Isolate Nodule
42 2721755684 Rhizobium phaseoli sv. phaseoli N841 Isolate Nodule
43 2721755685 Rhizobium phaseoli sv. phaseoli R611 Isolate Nodule
44 2721755686 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
45 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
46 2721755810 Rhizobium sp. N871 Isolate Nodule
47 2721755819 Rhizobium phaseoli sv. phaseoli N771 Isolate Nodule
48 2721755822 Rhizobium phaseoli sv. phaseoli R650 Isolate Nodule
49 2721755823 Rhizobium phaseoli sv. phaseoli R630 Isolate Nodule
50 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
51 2728369352 Rhizobium phaseoli sv. phaseoli N831 Isolate Nodule
52 2728369365 Rhizobium sp. N1341 Isolate Nodule
53 2728369397 Rhizobium sp. N1314 Isolate Nodule
54 2756170246 Mesorhizobium loti DSM 2626 Isolate Nodule
55 2791355091 Sinorhizobium sp. FG01 Isolate Nodule
56 2791355092 Sinorhizobium sp. NG07B Isolate Nodule
57 2791355094 Sinorhizobium sp. BJ1 Isolate Nodule
58 2791355123 Mesorhizobium sophorae ICMP 19535 Isolate Unclassified
59 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
60 2791355199
61 2791355259 Rhizobium hidalgonense FH14 Isolate Nodule
62 2791355262 Rhizobium sp. M1 Isolate Nodule
63 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
64 2802429605 Rhizobium sophoriradicis L101 Isolate Nodule
65 2816332527 Bradyrhizobium diazoefficiens Y21 Isolate Nodule
66 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
67 2824617872 Bradyrhizobium sp. HAMBI 2133 Isolate Unclassified
68 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
69 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
70 2824644064 Bradyrhizobium sp. HAMBI 2137 Isolate Unclassified
71 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
72 2824671348 Bradyrhizobium sp. HAMBI 2125 Isolate Unclassified
73 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
74 2824687955 Bradyrhizobium sp. HAMBI 2126 Isolate Unclassified
75 2824696289 Bradyrhizobium sp. HAMBI 2127 Isolate Unclassified
76 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
77 2824714736 Bradyrhizobium sp. HAMBI 2151 Isolate Unclassified
78 2824723954 Bradyrhizobium sp. HAMBI 2152 Isolate Unclassified
79 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
80 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
81 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
82 2838016132 Rhizobium phaseoli SEMIA 4071 Isolate Nodule
83 2838061910 Rhizobium phaseoli L15 Isolate Nodule
84 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
85 2838668709 Rhizobium sophoriradicis SEMIA 403 Isolate Nodule
86 2838701080 Rhizobium aethiopicum SEMIA 428 Isolate Nodule
87 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
88 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
89 2842264693 Rhizobium phaseoli SEMIA 487 Isolate Nodule
90 2842291075 Rhizobium leguminosarum SEMIA 491 Isolate Nodule
91 2842311132 Rhizobium phaseoli SEMIA 4002 Isolate Nodule
92 2842317721 Rhizobium etli SEMIA 4004 Isolate Nodule
93 2842341865 Rhizobium leguminosarum SEMIA 4011 Isolate Nodule
94 2842363717 Rhizobium leguminosarum SEMIA 4016 Isolate Nodule
95 2842370503 Rhizobium leguminosarum SEMIA 4022 Isolate Nodule
96 2842377471 Rhizobium leguminosarum SEMIA 4024 Isolate Nodule
97 2842402390 Rhizobium lentis SEMIA 4033 Isolate Nodule
98 2842409023 Rhizobium lentis SEMIA 4034 Isolate Nodule
99 2842428310 Rhizobium phaseoli SEMIA 4050 Isolate Nodule
100 2842434925 Rhizobium esperanzae SEMIA 4051 Isolate Nodule
101 2842441272 Rhizobium esperanzae SEMIA 4053 Isolate Nodule
102 2842447887 Rhizobium esperanzae SEMIA 4055 Isolate Nodule
103 2842462802 Rhizobium phaseoli SEMIA 4057 Isolate Nodule
104 2842469257 Rhizobium phaseoli SEMIA 4058 Isolate Nodule
105 2842489311 Rhizobium sophoriradicis SEMIA 4061 Isolate Nodule
106 2842495871 Rhizobium etli SEMIA 4062 Isolate Nodule
107 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
108 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
109 2847939898 Bradyrhizobium ottawaense OO99 Isolate Unclassified
110 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
111 2850079185 Ensifer aridi JNVU TP6 Isolate Unclassified
112 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
113 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
114 2869162929 Mesorhizobium sanjuanii BSA136 Isolate Nodule
115 2871474448 Mesorhizobium sp. M6A.T.Cr.TU.017.01.1.1 Isolate Nodule
116 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
117 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
118 2874645413 Bradyrhizobium canariense UBMA122 Isolate Nodule
119 2876363079 Mesorhizobium loti R7ANS::ICEMlSym2042 Isolate Nodule
120 2876369609 Mesorhizobium sp. USDA-HM6 Isolate Unclassified
121 2876771140 Bradyrhizobium canariense UBMA192 Isolate Nodule
122 2876818435 Bradyrhizobium canariense UBMA195 Isolate Nodule
123 2879074833 Bradyrhizobium canariense UBMA171 Isolate Nodule
124 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
125 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
126 2882632389 Mesorhizobium waimense ICMP19557 Isolate Unclassified
127 2885409591 Bradyrhizobium sp. NAS80.1 Isolate Unclassified
128 2888350351 Mesorhizobium sp. M2A.F.Ca.ET.046.03.2.1 Isolate Nodule
129 2888378607 Bradyrhizobium sp. LCT2 Isolate Unclassified
130 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
131 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
132 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
133 2903528002 Mesorhizobium loti R7ANS::ICEMlSym2037 Isolate Nodule
134 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
135 2904666416 Bradyrhizobium nanningense CCBAU 51757 Isolate Unclassified
136 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
137 2904699407
138 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
139 2906610324
140 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
141 2906643746 Bradyrhizobium genosp. SA-3 Rp7b Isolate Unclassified
142 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
143 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
144 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
145 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
146 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
147 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
148 2922368715
149 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
150 2922425934
151 2929615660 Bradyrhizobium japonicum TXVA Isolate Nodule
152 2929624759 Bradyrhizobium japonicum TXEA Isolate Nodule
153 2933577622 Bradyrhizobium japonicum SEMIA 417 Isolate Nodule
154 2935819856 Bradyrhizobium sp. RT3b Isolate Nodule
155 2935847175 Bradyrhizobium sp. RT5a Isolate Nodule
156 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
157 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
158 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
159 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
160 2958064165 Mesorhizobium sp. SARCC-RB16n Isolate Unclassified
161 2963644680 Mesorhizobium japonicum R7A Isolate Nodule
162 2968083720 Mesorhizobium erdmanii Opo-242 Isolate Unclassified
163 2968091066 Mesorhizobium sp. AA23 Isolate Unclassified
164 2968128360 Mesorhizobium sp. WSM3873 Isolate Unclassified
165 2970524798 Mesorhizobium sp. M5C.F.Ca.ET.164.01.1.1 Isolate Nodule
166 2977864932 Mesorhizobium tamadayense DSM 28320 Isolate Nodule
167 2977986579 Mesorhizobium intechi BD68 Isolate Unclassified
168 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
169 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
170 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
171 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
172 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
173 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
174 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
175 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
176 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
177 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
178 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
179 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
180 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
181 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
182 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
183 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
184 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
185 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
186 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
187 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
188 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
189 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
190 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
191 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
192 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
193 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
194 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
195 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
196 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
197 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
198 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
199 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
200 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
201 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
202 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
203 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
204 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
205 637000159 Mesorhizobium japonicum MAFF 303099 Isolate Unclassified
206 649633066 Mesorhizobium ciceri bv. biserrulae WSM1271 Isolate Nodule
207 8002285264 Aminobacter anthyllidis LMG 26462 Isolate Nodule
208 8005275841 Rhizobium sp. N4311 Isolate Nodule
209 8005307578 Rhizobium leguminosarum bv. phaseoli LCS0306 Isolate Unclassified
210 8005430974 Rhizobium phaseoli Y20 Isolate Nodule
211 8005619151 Rhizobium phaseoli CCGM2 Isolate Unclassified
212 8005668836 Rhizobium phaseoli CCGM9 Isolate Unclassified
213 8005695170 Rhizobium sp. RMa-01 Isolate Unclassified
214 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
215 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
216 8018176218 Rhizobium sp. N122 Isolate Nodule
217 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
218 8024501048 Rhizobium sp. H4 Isolate Nodule
219 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
220 8054002106 Azospirillum lipoferum 59b Isolate Unclassified
221 8055617313 Mesorhizobium onobrychidis OM4 Isolate Nodule
222 8055742211 Bradyrhizobium japonicum 5038 Isolate Nodule
223 8056375014 Rhizobium redzepovicii 18T Isolate Nodule
224 8056382006 Rhizobium croatiense 13T Isolate Nodule
225 8056673599 Bradyrhizobium hereditatis WSM 1738 Isolate Nodule
226 8057575449 Rhizobium mayense CCGE526 Isolate Nodule
227 8057874678 Rhizobium acaciae 1AS12 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 16.16
Metatranscriptomes 0
Isolates 83.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.43
Nodule 60.26
Rhizoplane 2.56
Rhizosphere 8.12
Stem 0
Stem Tuber 0
Unclassified 28.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0099824_1022612 3300006942 Bacteria 4103
2 Ga0163163_10030350 3300014325 Bacteria 5208
3 Ga0214544_1002538 3300021320 Bacteria 38352
4 Ga0214542_1017882 3300021321 Bacteria 6223
5 Ga0214545_1016007 3300021324 Bacteria 7930
6 Ga0214543_1005252 3300021327 Bacteria 24005
7 Ga0214543_1006485 3300021327 Bacteria 20784
8 Ga0207657_10020755 3300025919 Bacteria 6200
9 Ga0209389_1000204 3300027296 Bacteria 42757
10 Ga0209389_1000315 3300027296 Bacteria 29832
11 Ga0209589_1027958 3300027357 Bacteria 3537
12 Ga0209489_101564 3300027361 Bacteria 47172
13 Ga0265331_10012400 3300031250 Bacteria 4617
14 Ga0315911_1000016 3300033442 Bacteria 166408
15 Ga0373937_0049506 3300036401 Bacteria 3848
16 Ga0439465_0002852 3300041413 Bacteria 5660
17 Ga0439432_009116 3300042006 Bacteria 3466
18 Ga0439449_0011565 3300042007 Bacteria 3319
19 Ga0439457_015066 3300042014 Bacteria 1728
20 Ga0439462_0015271 3300042015 Bacteria 1978
21 Ga0495667_0022139 3300046559 Bacteria 4283
22 Ga0496100_0064401 3300048903 Bacteria 2426
23 Ga0496102_0002503 3300048905 Bacteria 15690
24 Ga0496103_0016656 3300048906 Bacteria 4389
25 Ga0496109_0027022 3300048912 Bacteria 5120
26 Ga0496110_0001209 3300048913 Bacteria 18367
27 Ga0496112_0088165 3300048915 Bacteria 3070
28 Ga0496117_0082923 3300048920 Bacteria 2098
29 Ga0501075_0014648 3300049591 Bacteria 5619
30 Ga0501076_0020493 3300049592 Bacteria 5062
31 Ga0501077_0052848 3300049593 Bacteria 2579
32 Ga0501079_0040797 3300049741 Bacteria 3582
33 Ga0501081_0013041 3300049743 Bacteria 5469
34 Ga0501035_0031275 3300049822 Bacteria 4848
35 Ga0501044_0234444 3300049823 Bacteria 1781
36 Ga0500652_003185 3300053131 Bacteria 4961
37 Ga0501082_0037822 3300060353 Bacteria 4162

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2896384573 2896390926 363
2 3300049593 Ga0501077_0052848 Ga0501077_0052848_1373_2563 369
3 3300049823 Ga0501044_0234444 Ga0501044_0234444_322_1722 369
4 iso_pu_bacteria 2615840624 2616298238 380
5 iso_pu_bacteria 2718218009 2719729457 380
6 iso_pu_bacteria 2718218363 2721143707 380
7 iso_pu_bacteria 2718218366 2721166803 380
8 iso_pu_bacteria 2721755514 2722837781 380
9 iso_pu_bacteria 2721755556 2723031446 380
10 iso_pu_bacteria 2721755810 2724041350 380
11 iso_pu_bacteria 2728369352 2730105138 380
12 iso_pu_bacteria 2728369365 2730161553 380
13 iso_pu_bacteria 8005668836 8005674438 380
14 iso_pu_bacteria 2874620515 2874623839 383
15 3300025919 Ga0207657_10020755 Ga0207657_100207556 384
16 iso_pu_bacteria 2718217927 2719383653 407
17 3300046559 Ga0495667_0022139 Ga0495667_0022139_2942_4264 413
18 3300033442 Ga0315911_1000016 Ga0315911_1000016129 415
19 3300049591 Ga0501075_0014648 Ga0501075_0014648_765_2093 415
20 3300049592 Ga0501076_0020493 Ga0501076_0020493_3514_4842 415
21 3300049741 Ga0501079_0040797 Ga0501079_0040797_2217_3545 415
22 3300049743 Ga0501081_0013041 Ga0501081_0013041_3748_5076 415
23 3300049822 Ga0501035_0031275 Ga0501035_0031275_1020_2348 415
24 3300060353 Ga0501082_0037822 Ga0501082_0037822_2220_3548 415
25 iso_pu_bacteria 2513237090 2513612353 415
26 iso_pu_bacteria 2513237138 2513872022 415
27 iso_pu_bacteria 2558860100 2558864626 415
28 iso_pu_bacteria 2850079185 2850083319 415
29 iso_pu_bacteria 2920760137 2920762653 415
30 iso_pu_bacteria 2968128360 2968131647 415
31 iso_pu_bacteria 637000159 637077882 415
32 3300031250 Ga0265331_10012400 Ga0265331_100124002 416
33 iso_pu_bacteria 2512875024 2512963428 416
34 iso_pu_bacteria 2513237164 2514034304 416
35 iso_pu_bacteria 2756170246 2756677181 416
36 iso_pu_bacteria 2869162929 2869164146 416
37 iso_pu_bacteria 2876363079 2876367361 416
38 iso_pu_bacteria 2903528002 2903530531 416
39 iso_pu_bacteria 2963644680 2963650564 416
40 iso_pu_bacteria 2968091066 2968094623 416
41 iso_pu_bacteria 2968128360 2968133816 416
42 iso_pu_bacteria 2977986579 2977993083 416
43 iso_pu_bacteria 637000159 637078376 416
44 iso_pu_bacteria 8002285264 8002286936 416
45 iso_pu_bacteria 2871474448 2871476544 417
46 iso_pu_bacteria 2958064165 2958069086 417
47 iso_pu_bacteria 2970524798 2970525119 417
48 iso_pu_bacteria 8055617313 8055624107 417
49 3300014325 Ga0163163_10030350 Ga0163163_100303505 418
50 3300048903 Ga0496100_0064401 Ga0496100_0064401_991_2328 418
51 3300048912 Ga0496109_0027022 Ga0496109_0027022_523_1860 418
52 3300048913 Ga0496110_0001209 Ga0496110_0001209_9644_10981 418
53 3300048915 Ga0496112_0088165 Ga0496112_0088165_1658_2995 418
54 iso_pu_bacteria 2721755686 2723571768 418
55 iso_pu_bacteria 2888350351 2888351533 418
56 iso_pu_bacteria 2513237351 2514590594 419
57 iso_pu_bacteria 2687453392 2688601010 419
58 iso_pu_bacteria 2791355123 2792746350 419
59 iso_pu_bacteria 2824679649 2824682778 419
60 iso_pu_bacteria 2854916844 2854921212 419
61 iso_pu_bacteria 2876369609 2876370000 419
62 iso_pu_bacteria 2882632389 2882639618 419
63 iso_pu_bacteria 2977864932 2977866298 419
64 iso_pu_bacteria 2508501050 2508735388 420
65 iso_pu_bacteria 2508501123 2509118250 420
66 iso_pu_bacteria 2508501128 2509154020 420
67 iso_pu_bacteria 2513237094 2513644011 420
68 iso_pu_bacteria 2513237096 2513661501 420
69 iso_pu_bacteria 2513237101 2513695600 420
70 iso_pu_bacteria 2513237145 2513922673 420
71 iso_pu_bacteria 2513237161 2514017426 420
72 iso_pu_bacteria 2524023228 2524542237 420
73 iso_pu_bacteria 2721755755 2723844002 420
74 iso_pu_bacteria 2728368998 2728751416 420
75 iso_pu_bacteria 2791355197 2793071669 420
76 iso_pu_bacteria 2791355199 2793081094 420
77 iso_pu_bacteria 2824609381 2824609480 420
78 iso_pu_bacteria 2824653114 2824653684 420
79 iso_pu_bacteria 2824671348 2824671425 420
80 iso_pu_bacteria 2824687955 2824688098 420
81 iso_pu_bacteria 2824696289 2824696828 420
82 iso_pu_bacteria 2824732956 2824733500 420
83 iso_pu_bacteria 2838122688 2838129882 420
84 iso_pu_bacteria 2847930680 2847933403 420
85 iso_pu_bacteria 2874604998 2874612011 420
86 iso_pu_bacteria 2874645413 2874646403 420
87 iso_pu_bacteria 2876771140 2876771947 420
88 iso_pu_bacteria 2876818435 2876819252 420
89 iso_pu_bacteria 2879074833 2879075798 420
90 iso_pu_bacteria 2879083081 2879088762 420
91 iso_pu_bacteria 2881665667 2881669502 420
92 iso_pu_bacteria 2885409591 2885415081 420
93 iso_pu_bacteria 2889033259 2889041831 420
94 iso_pu_bacteria 2903748898 2903752257 420
95 iso_pu_bacteria 2904666416 2904672598 420
96 iso_pu_bacteria 2904690495 2904693752 420
97 iso_pu_bacteria 2904699407 2904706276 420
98 iso_pu_bacteria 2906610324 2906615125 420
99 iso_pu_bacteria 2906635258 2906638787 420
100 iso_pu_bacteria 2906660503 2906664752 420
101 iso_pu_bacteria 2908739725 2908739913 420
102 iso_pu_bacteria 2908756301 2908763308 420
103 iso_pu_bacteria 2922361189 2922366353 420
104 iso_pu_bacteria 2922368715 2922378135 420
105 iso_pu_bacteria 2922386360 2922386592 420
106 iso_pu_bacteria 2922425934 2922432866 420
107 iso_pu_bacteria 2935819856 2935827193 420
108 iso_pu_bacteria 2935847175 2935854530 420
109 iso_pu_bacteria 2936055302 2936062521 420
110 iso_pu_bacteria 2941507105 2941513999 420
111 iso_pu_bacteria 2941515067 2941522015 420
112 iso_pu_bacteria 2941523033 2941529753 420
113 iso_pu_bacteria 3005474847 3005482146 420
114 iso_pu_bacteria 8006933436 8006938533 420
115 iso_pu_bacteria 8006973647 8006974061 420
116 iso_pu_bacteria 8019565922 8019574929 420
117 iso_pu_bacteria 8056673599 8056680076 420
118 iso_pu_bacteria 2509276022 2509398619 421
119 iso_pu_bacteria 2513237139 2513879457 421
120 iso_pu_bacteria 2517093001 2517108842 421
121 iso_pu_bacteria 2528768022 2528858185 421
122 iso_pu_bacteria 2802429603 2805922894 421
123 iso_pu_bacteria 2816332527 2818243621 421
124 iso_pu_bacteria 2824617872 2824618237 421
125 iso_pu_bacteria 2824626560 2824627056 421
126 iso_pu_bacteria 2824635225 2824635275 421
127 iso_pu_bacteria 2824644064 2824644114 421
128 iso_pu_bacteria 2824704595 2824704724 421
129 iso_pu_bacteria 2824714736 2824714786 421
130 iso_pu_bacteria 2824723954 2824724149 421
131 iso_pu_bacteria 2824753945 2824754724 421
132 iso_pu_bacteria 2824763712 2824764475 421
133 iso_pu_bacteria 2841949485 2841955189 421
134 iso_pu_bacteria 2841974524 2841976822 421
135 iso_pu_bacteria 2847939898 2847940493 421
136 iso_pu_bacteria 2888378607 2888386800 421
137 iso_pu_bacteria 2904711408 2904713930 421
138 iso_pu_bacteria 2906643746 2906649531 421
139 iso_pu_bacteria 2908775508 2908777818 421
140 iso_pu_bacteria 2929615660 2929621723 421
141 iso_pu_bacteria 2929624759 2929631873 421
142 iso_pu_bacteria 2933577622 2933583255 421
143 iso_pu_bacteria 3005483717 3005490623 421
144 iso_pu_bacteria 649633066 649875486 421
145 iso_pu_bacteria 8055742211 8055744076 421
146 3300048905 Ga0496102_0002503 Ga0496102_0002503_3972_5372 422
147 3300048906 Ga0496103_0016656 Ga0496103_0016656_2176_3576 422
148 3300048920 Ga0496117_0082923 Ga0496117_0082923_654_2054 422
149 iso_pu_bacteria 2515154107 2515612666 422
150 iso_pu_bacteria 2791355091 2792624245 422
151 iso_pu_bacteria 2791355092 2792630385 422
152 iso_pu_bacteria 2852387548 2852392524 422
153 iso_pu_bacteria 8046767195 8046770993 422
154 iso_pu_bacteria 8057575449 8057580034 422
155 3300053131 Ga0500652_003185 Ga0500652_003185_2319_3680 423
156 iso_pu_bacteria 2511231221 2512034483 423
157 iso_pu_bacteria 2522572158 2523104126 423
158 iso_pu_bacteria 2597490356 2599105269 423
159 iso_pu_bacteria 2846952575 2846955050 423
160 iso_pu_bacteria 2848858292 2848858657 423
161 iso_pu_bacteria 2897803580 2897804132 423
162 iso_pu_bacteria 2968083720 2968085781 423
163 iso_pu_bacteria 8054002106 8054003980 423
164 iso_pu_bacteria 8057874678 8057880383 423
165 3300021320 Ga0214544_1002538 Ga0214544_100253820 424
166 3300021321 Ga0214542_1017882 Ga0214542_10178824 424
167 3300021327 Ga0214543_1005252 Ga0214543_10052523 424
168 3300021327 Ga0214543_1006485 Ga0214543_100648513 424
169 3300027296 Ga0209389_1000204 Ga0209389_10002045 424
170 3300036401 Ga0373937_0049506 Ga0373937_0049506_1684_3087 424
171 3300041413 Ga0439465_0002852 Ga0439465_0002852_2144_3490 424
172 3300042006 Ga0439432_009116 Ga0439432_009116_188_1534 424
173 3300042007 Ga0439449_0011565 Ga0439449_0011565_318_1664 424
174 3300042014 Ga0439457_015066 Ga0439457_015066_166_1512 424
175 3300042015 Ga0439462_0015271 Ga0439462_0015271_363_1709 424
176 iso_pu_bacteria 2508501122 2509112348 424
177 iso_pu_bacteria 2509276019 2509378598 424
178 iso_pu_bacteria 2513237088 2513597523 424
179 iso_pu_bacteria 2516143018 2516209939 424
180 iso_pu_bacteria 2516653085 2517082071 424
181 iso_pu_bacteria 2517572143 2517890648 424
182 iso_pu_bacteria 2558860100 2558860588 424
183 iso_pu_bacteria 2718218199 2720488856 424
184 iso_pu_bacteria 2718218235 2720634164 424
185 iso_pu_bacteria 2718218269 2720778003 424
186 iso_pu_bacteria 2718218365 2721155454 424
187 iso_pu_bacteria 2721755684 2723563874 424
188 iso_pu_bacteria 2721755685 2723570739 424
189 iso_pu_bacteria 2721755819 2724087745 424
190 iso_pu_bacteria 2721755822 2724102287 424
191 iso_pu_bacteria 2721755823 2724107471 424
192 iso_pu_bacteria 2728369397 2730296334 424
193 iso_pu_bacteria 2791355094 2792641994 424
194 iso_pu_bacteria 2791355259 2793319126 424
195 iso_pu_bacteria 2791355262 2793338482 424
196 iso_pu_bacteria 2802429605 2805931994 424
197 iso_pu_bacteria 2838016132 2838022569 424
198 iso_pu_bacteria 2838061910 2838068239 424
199 iso_pu_bacteria 2838668709 2838675093 424
200 iso_pu_bacteria 2838701080 2838707430 424
201 iso_pu_bacteria 2842264693 2842270770 424
202 iso_pu_bacteria 2842291075 2842297991 424
203 iso_pu_bacteria 2842311132 2842317688 424
204 iso_pu_bacteria 2842317721 2842324442 424
205 iso_pu_bacteria 2842341865 2842348692 424
206 iso_pu_bacteria 2842363717 2842370426 424
207 iso_pu_bacteria 2842370503 2842377371 424
208 iso_pu_bacteria 2842377471 2842384424 424
209 iso_pu_bacteria 2842402390 2842408809 424
210 iso_pu_bacteria 2842409023 2842415430 424
211 iso_pu_bacteria 2842428310 2842434636 424
212 iso_pu_bacteria 2842434925 2842441025 424
213 iso_pu_bacteria 2842441272 2842447642 424
214 iso_pu_bacteria 2842447887 2842454523 424
215 iso_pu_bacteria 2842462802 2842469032 424
216 iso_pu_bacteria 2842469257 2842475553 424
217 iso_pu_bacteria 2842489311 2842495776 424
218 iso_pu_bacteria 2842495871 2842502478 424
219 iso_pu_bacteria 2850079185 2850083051 424
220 iso_pu_bacteria 8005275841 8005276873 424
221 iso_pu_bacteria 8005307578 8005312277 424
222 iso_pu_bacteria 8005430974 8005437359 424
223 iso_pu_bacteria 8005619151 8005625200 424
224 iso_pu_bacteria 8005695170 8005699199 424
225 iso_pu_bacteria 8018176218 8018181153 424
226 iso_pu_bacteria 8024501048 8024504866 424
227 iso_pu_bacteria 8056375014 8056379824 424
228 iso_pu_bacteria 8056382006 8056386366 424
229 3300006942 Ga0099824_1022612 Ga0099824_10226123 425
230 3300021324 Ga0214545_1016007 Ga0214545_10160077 425
231 3300027296 Ga0209389_1000315 Ga0209389_10003153 425
232 3300027357 Ga0209589_1027958 Ga0209589_10279582 425
233 3300027361 Ga0209489_101564 Ga0209489_1015643 425
234 iso_pu_bacteria 2802429605 2805930729 425

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04055

Radical_SAM

Radical SAM superfamily

109

283

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1olt-assembly1.cif.gz_A coproporphyrinogen iii oxidase (hemn) from escherichia coli is a radical sam enzyme. 0.9467 16 418
1olt-assembly1.cif.gz_A coproporphyrinogen iii oxidase (hemn) from escherichia coli is a radical sam enzyme. 0.8971 16 418
4k39-assembly2.cif.gz_B native ansmecpe with bound adomet and cp18cys peptide 0.6683 47 157
4k37-assembly1.cif.gz_A native ansmecpe with bound adomet 0.6609 47 160
5ejk-assembly1.cif.gz_E crystal structure of the rous sarcoma virus intasome 0.6086 114 170
ID Description Score Start End Superfamily
af_P32131_50_279_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9539 45 254 3.20.20.70
af_P32131_364_457_1.10.10.920 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A; 0.9082 340 421 1.10.10.920
1oltA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A; 0.9073 340 418 1.10.10.920
af_P9WP73_8_223_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.8889 51 241 3.80.30.20
1oltA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A; 0.8766 340 418 1.10.10.920
ID Description Score Start End GO Terms
AF-A0A528FMR3-F1-model_v4 coproporphyrinogen dehydrogenase (EC 1.3.98.3) 0.9893 53 422 GO:0004109
GO:0005737
GO:0006782
GO:0051539
GO:0051989
AF-A0A7Y1Z0I9-F1-model_v4 Oxygen-independent coproporphyrinogen III oxidase (EC 1.3.98.3) (Coproporphyrinogen III dehydrogenase) 0.9833 4 425 GO:0004109
GO:0005737
GO:0006782
GO:0046872
GO:0051539
GO:0051989
AF-A0A5P6NXI8-F1-model_v4 deleted 0.9806 38 236
AF-A0A2G2LKV4-F1-model_v4 Coproporphyrinogen-III oxidase (EC 1.3.98.3) 0.9801 8 418 GO:0004109
GO:0005737
GO:0006782
GO:0046872
GO:0051539
GO:0051989
AF-A0A7X5TEX8-F1-model_v4 Coproporphyrinogen-III oxidase (EC 1.3.98.3) 0.9799 3 423 GO:0004109
GO:0005737
GO:0006782
GO:0046872
GO:0051539
GO:0051989

Feature Viewer

pLDDT pTM Quality
90.59 0.9 High
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Predicted Structure (AlphaFold2)

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