F346712

General Info

Members Datasets Scaffolds Average Seq Length
234 170 190 445

Family's Representative Sequence

Representative Sequence 3300005288|Ga0065714_10069033|Ga0065714_100690333
Length 474
Sequence MSSNNCYDVTTWPVGNPSEDVGEVINSIIADIKDRQTVTDANNGGKPGAVIYIPPGDYHLRTQVVIDVSFLRIHGSGHGFTSSSIRFNVPEDEWPDLHELWPGGSRILVDIPLGGDGEESKGAAFYVERSGSPRISSVEFSNFCIDGLHFNSDGSGMHPENTYVNGKTGIYVANANDSFRVTGMGFVYLENALTIYNADALSVHDNFIAECGSCIELRGWGQASKITDNLVGAGFKGHSIYAENHGGLLITANNVFPRGASSVHLNGVTRSSITNNRLHSFYPGMLILEANSSENLVATNHFLRDHEPWTPFLGVDNGLNDLNGLLCVSGSNNSVVGNHFSQIIDSQSIRPTGATPVIIRLMAGVGNFVSNNHVVAMDVHSKSSDSCFSAQVDALLTTEASDGLAVTAVMVDSESARNTILDSGSDAQVIADRAVNAFRATPTIGFEAAHALVDQYPAQARRDPRGSPSGPWDE

Samples

Sample ID Description Type Environment
1 2554235234 Klebsiella michiganensis SA2 Isolate Unclassified
2 2600255287 Klebsiella quasipneumoniae NFIX11 Isolate Rhizoplane
3 2600255291 Klebsiella quasipneumoniae NFIX19 Isolate Rhizoplane
4 2600255298 Klebsiella quasipneumoniae NFIX21 Isolate Rhizoplane
5 2600255299 Klebsiella quasipneumoniae NFIX22 Isolate Rhizoplane
6 2600255303 Klebsiella quasipneumoniae NFIX36 Isolate Rhizoplane
7 2602042052 Klebsiella quasipneumoniae NFIX18 Isolate Rhizoplane
8 2602042053 Klebsiella quasipneumoniae NFIX12 Isolate Rhizoplane
9 2602042111 Klebsiella quasipneumoniae NFIX20 Isolate Rhizoplane
10 2603880184 Klebsiella quasipneumoniae NFIX27 Isolate Rhizoplane
11 2636415599 Klebsiella variicola DX120E Isolate Unclassified
12 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
13 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
14 2791355275 Enterobacter sp. Sa187 Isolate Unclassified
15 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
16 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
17 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
18 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
19 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
20 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
21 2854601825 Dickeya dianthicola SS70 Isolate Stem Tuber
22 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
23 2884086401 Kluyvera sp. PO2S7 Isolate Rhizosphere
24 2888373701 Serratia rhizosphaerae KUDC3025 Isolate Rhizosphere
25 2904513164 Klebsiella variicola 1431 Isolate Rhizosphere
26 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
27 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
28 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
29 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
30 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
31 2919108558 Klebsiella sp. 1400 Isolate Rhizosphere
32 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
33 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
34 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
35 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
36 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
37 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
38 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
39 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
40 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
41 2971820967 Klebsiella sp. MPUS7 Isolate Rhizosphere
42 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
43 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
44 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
45 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
46 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
47 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
48 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
49 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
50 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
51 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
52 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
53 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
54 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
55 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
56 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
57 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
58 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
59 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
60 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
61 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
62 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
66 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
67 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
68 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
74 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
75 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
76 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
77 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
78 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
79 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
93 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
94 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
95 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
96 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
97 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
98 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
99 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
100 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
101 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
102 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
103 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
104 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
108 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
109 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
110 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
111 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
112 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
113 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
114 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
115 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
116 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
117 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
118 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
119 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
120 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
121 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
122 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
123 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
124 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
125 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
126 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
127 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
128 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
129 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
130 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
131 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
132 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
133 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
134 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
135 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
136 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
137 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
138 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
139 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
140 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
141 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
142 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
143 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
144 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
145 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
146 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
147 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
148 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
149 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
150 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
151 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
162 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
163 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
165 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
166 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
167 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
168 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
169 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere
170 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 80.77
Metatranscriptomes 0.43
Isolates 18.8

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.41
Nodule 1.71
Rhizoplane 15.38
Rhizosphere 67.95
Stem 0
Stem Tuber 0.43
Unclassified 8.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10038753 3300001989 Bacteria 1600
2 JGI24735J21928_10002952 3300002067 Bacteria 5849
3 JGI25162J39368_1006717 3300002737 Bacteria 1926
4 JGI25164J39214_1000186 3300002772 Bacteria 54746
5 JGI25152J39213_1000233 3300002773 Bacteria 37300
6 JGI25165J46597_1000055 3300003214 Bacteria 224187
7 rootH1_10040895 3300003316 Bacteria 3508
8 Ga0065714_10069033 3300005288 Bacteria 4421
9 Ga0070660_100060713 3300005339 Bacteria 2935
10 Ga0070667_100025253 3300005367 Bacteria 4939
11 Ga0068856_100076343 3300005614 Bacteria 3320
12 Ga0068856_100371017 3300005614 Bacteria 1450
13 Ga0068852_100000889 3300005616 Bacteria 19775
14 Ga0068863_100039807 3300005841 Bacteria 4470
15 Ga0068858_100000648 3300005842 Bacteria 36262
16 Ga0075364_10037087 3300006051 Bacteria 3154
17 Ga0079104_1000030 3300006946 Bacteria 207526
18 Ga0079104_1000383 3300006946 Bacteria 51488
19 Ga0105251_10001442 3300009011 Bacteria 20450
20 Ga0105251_10015583 3300009011 Bacteria 4145
21 Ga0105244_10000157 3300009036 Bacteria 71237
22 Ga0105244_10000390 3300009036 Bacteria 40624
23 Ga0105244_10005990 3300009036 Bacteria 7963
24 Ga0105247_10024581 3300009101 Bacteria 3631
25 Ga0105243_10002764 3300009148 Bacteria 14592
26 Ga0105243_10269711 3300009148 Bacteria 1527
27 Ga0105237_10018488 3300009545 Bacteria 7213
28 Ga0105237_10133946 3300009545 Bacteria 2472
29 Ga0105238_10003164 3300009551 Bacteria 16410
30 Ga0105239_10013291 3300010375 Bacteria 9148
31 Ga0105239_10098105 3300010375 Bacteria 3238
32 Ga0105239_10133959 3300010375 Bacteria 2758
33 Ga0105239_10312356 3300010375 Bacteria 1772
34 Ga0105246_10006393 3300011119 Bacteria 7196
35 Ga0105246_10047237 3300011119 Bacteria 2939
36 Ga0105246_10122031 3300011119 Bacteria 1933
37 Ga0157371_10000092 3300013102 Bacteria 141282
38 Ga0157370_10098616 3300013104 Bacteria 2740
39 Ga0157374_10099478 3300013296 Bacteria 2786
40 Ga0163162_10003093 3300013306 Bacteria 15894
41 Ga0163162_10111084 3300013306 Bacteria 2838
42 Ga0157372_10011318 3300013307 Bacteria 9487
43 Ga0157372_10092981 3300013307 Bacteria 3431
44 Ga0157375_10008462 3300013308 Bacteria 9010
45 Ga0157376_10069124 3300014969 Bacteria 2993
46 Ga0182006_1000144 3300015261 Bacteria 75603
47 Ga0207427_100054 3300025231 Bacteria 216315
48 Ga0209437_100339 3300025233 Bacteria 56482
49 Ga0209129_1000130 3300025258 Bacteria 128065
50 Ga0209233_1000001 3300025261 Bacteria 2992747
51 Ga0209025_1000364 3300025294 Bacteria 96280
52 Ga0209051_1009292 3300025303 Bacteria 5080
53 Ga0209051_1017013 3300025303 Bacteria 3265
54 Ga0207697_10031774 3300025315 Bacteria 2159
55 Ga0207655_1004736 3300025728 Bacteria 9508
56 Ga0207655_1008581 3300025728 Bacteria 6465
57 Ga0207655_1013970 3300025728 Bacteria 4573
58 Ga0207713_1000178 3300025735 Bacteria 91683
59 Ga0207645_10107987 3300025907 Bacteria 1800
60 Ga0207671_10033251 3300025914 Bacteria 3836
61 Ga0207671_10050261 3300025914 Bacteria 3087
62 Ga0207657_10060432 3300025919 Bacteria 3252
63 Ga0207694_10000222 3300025924 Bacteria 55592
64 Ga0207668_10139743 3300025972 Bacteria 1861
65 Ga0207658_10005558 3300025986 Bacteria 8628
66 Ga0207703_10000238 3300026035 Bacteria 62524
67 Ga0207683_10094825 3300026121 Bacteria 2660
68 Ga0207698_10000930 3300026142 Bacteria 17031
69 Ga0209281_1000012 3300027111 Bacteria 684886
70 Ga0209281_1000143 3300027111 Bacteria 174070
71 Ga0209371_1003001 3300027312 Bacteria 8740
72 Ga0268256_1002329 3300030500 Bacteria 9800
73 Ga0307408_100003896 3300031548 Bacteria 10161
74 Ga0307408_100046944 3300031548 Bacteria 3091
75 Ga0307408_100101723 3300031548 Bacteria 2190
76 Ga0307408_100128352 3300031548 Bacteria 1975
77 Ga0307514_10008221 3300031649 Bacteria 8908
78 Ga0307405_10048223 3300031731 Bacteria 2626
79 Ga0307413_10155506 3300031824 Bacteria 1599
80 Ga0307410_10058573 3300031852 Bacteria 2626
81 Ga0307410_10096805 3300031852 Bacteria 2107
82 Ga0307407_10021410 3300031903 Bacteria 3333
83 Ga0307407_10047492 3300031903 Bacteria 2437
84 Ga0307412_10060169 3300031911 Bacteria 2548
85 Ga0307412_10066713 3300031911 Bacteria 2440
86 Ga0307409_100211176 3300031995 Bacteria 1744
87 Ga0307416_100010062 3300032002 Bacteria 6228
88 Ga0307416_100072517 3300032002 Bacteria 2866
89 Ga0307416_100084331 3300032002 Bacteria 2700
90 Ga0395899_0005721 3300037312 Bacteria 9649
91 Ga0395899_0006337 3300037312 Bacteria 9162
92 Ga0395899_0078298 3300037312 Bacteria 2410
93 Ga0395900_0002515 3300037418 Bacteria 20129
94 Ga0395900_0020238 3300037418 Bacteria 6791
95 Ga0395900_0023082 3300037418 Bacteria 6367
96 Ga0395900_0137009 3300037418 Bacteria 2508
97 Ga0395898_0000321 3300037466 Bacteria 110293
98 Ga0395898_0001923 3300037466 Bacteria 26440
99 Ga0395898_0095659 3300037466 Bacteria 2854
100 Ga0395898_0125073 3300037466 Bacteria 2463
101 Ga0395898_0217771 3300037466 Bacteria 1821
102 Ga0395905_0094533 3300037471 Bacteria 2804
103 Ga0395905_0129248 3300037471 Bacteria 2376
104 Ga0395901_0006032 3300038443 Bacteria 12279
105 Ga0395901_0037868 3300038443 Bacteria 4987
106 Ga0395901_0048166 3300038443 Bacteria 4426
107 Ga0395901_0175410 3300038443 Bacteria 2248
108 Ga0395901_0300785 3300038443 Bacteria 1663
109 Ga0439436_0009411 3300041404 Bacteria 2996
110 Ga0439438_000002 3300041405 Bacteria 618223
111 Ga0439439_0010404 3300041406 Bacteria 2223
112 Ga0439433_0000163 3300041999 Bacteria 10387
113 Ga0439442_000037 3300042002 Bacteria 29843
114 Ga0439442_000347 3300042002 Bacteria 11017
115 Ga0439432_003378 3300042006 Bacteria 5924
116 Ga0439432_010542 3300042006 Bacteria 3196
117 Ga0439449_0000614 3300042007 Bacteria 13374
118 Ga0439449_0001568 3300042007 Bacteria 8962
119 Ga0439449_0005963 3300042007 Bacteria 4655
120 Ga0439462_0000494 3300042015 Bacteria 7773
121 Ga0450920_000205 3300042122 Bacteria 8657
122 Ga0450920_001297 3300042122 Bacteria 4116
123 Ga0450907_000260 3300042146 Bacteria 17972
124 Ga0450918_004636 3300042531 Bacteria 2496
125 Ga0466965_0000010 3300044683 Bacteria 112032
126 Ga0466961_0111682 3300044693 Bacteria 1719
127 Ga0495590_0000162 3300046457 Bacteria 39932
128 Ga0495631_0013566 3300046518 Bacteria 3954
129 Ga0495654_0014690 3300046530 Bacteria 4165
130 Ga0495633_0017453 3300046558 Bacteria 3669
131 Ga0495656_0000594 3300046615 Bacteria 11711
132 Ga0495670_0001509 3300046691 Bacteria 11356
133 Ga0495670_0018796 3300046691 Bacteria 3404
134 Ga0495681_0036588 3300047470 Bacteria 2426
135 Ga0496100_0003679 3300048903 Bacteria 8024
136 Ga0496100_0004602 3300048903 Bacteria 7330
137 Ga0496101_0002191 3300048904 Bacteria 11930
138 Ga0496101_0037737 3300048904 Bacteria 3429
139 Ga0496101_0111763 3300048904 Bacteria 2057
140 Ga0496102_0042101 3300048905 Bacteria 4138
141 Ga0496102_0046139 3300048905 Bacteria 3957
142 Ga0496102_0283425 3300048905 Bacteria 1562
143 Ga0496103_0008137 3300048906 Bacteria 6225
144 Ga0496103_0137310 3300048906 Bacteria 1563
145 Ga0496104_0023393 3300048907 Bacteria 5681
146 Ga0496105_0004514 3300048908 Bacteria 10479
147 Ga0496105_0050919 3300048908 Bacteria 3422
148 Ga0496105_0246192 3300048908 Bacteria 1449
149 Ga0496106_0017983 3300048909 Bacteria 5227
150 Ga0496107_0000535 3300048910 Bacteria 21203
151 Ga0496108_0000982 3300048911 Bacteria 22186
152 Ga0496109_0003435 3300048912 Bacteria 13227
153 Ga0496110_0005416 3300048913 Bacteria 10011
154 Ga0496111_0024625 3300048914 Bacteria 4241
155 Ga0496112_0046794 3300048915 Bacteria 4244
156 Ga0496112_0070161 3300048915 Bacteria 3463
157 Ga0496113_0024347 3300048916 Bacteria 4301
158 Ga0496113_0170265 3300048916 Bacteria 1725
159 Ga0496114_0009713 3300048917 Bacteria 7643
160 Ga0496114_0085695 3300048917 Bacteria 2668
161 Ga0496115_0071568 3300048918 Bacteria 2812
162 Ga0496117_0011580 3300048920 Bacteria 7886
163 Ga0496120_0041181 3300048923 Bacteria 2708
164 Ga0496121_0000160 3300048924 Bacteria 146354
165 Ga0496121_0009807 3300048924 Bacteria 10939
166 Ga0496124_0000935 3300048927 Bacteria 46956
167 Ga0496125_0006511 3300048928 Bacteria 12600
168 Ga0501312_006323 3300049528 Bacteria 1473
169 Ga0501032_0010432 3300049569 Bacteria 6699
170 Ga0501032_0021602 3300049569 Bacteria 4473
171 Ga0501033_0024243 3300049570 Bacteria 4577
172 Ga0501034_0000038 3300049571 Bacteria 237795
173 Ga0501034_0107138 3300049571 Bacteria 2787
174 Ga0501034_0137348 3300049571 Bacteria 2425
175 Ga0501036_0005178 3300049572 Bacteria 10545
176 Ga0501037_0003872 3300049573 Bacteria 10855
177 Ga0501037_0028598 3300049573 Bacteria 4117
178 Ga0501038_0006374 3300049574 Bacteria 10922
179 Ga0501039_0065827 3300049575 Bacteria 2812
180 Ga0501043_0003724 3300049579 Bacteria 12531
181 Ga0501043_0018108 3300049579 Bacteria 5523
182 Ga0501047_0005260 3300049581 Bacteria 12156
183 Ga0501048_0010138 3300049582 Bacteria 7048
184 Ga0501073_0000028 3300049589 Bacteria 118187
185 Ga0501279_005856 3300049775 Bacteria 1618
186 Ga0501035_0006080 3300049822 Bacteria 11366
187 Ga0501044_0082205 3300049823 Bacteria 3259
188 nmdc:mga00v17_33862_c1 3300050491 Bacteria 3030
189 Ga0500651_0000316 3300053093 Bacteria 27636
190 Ga0500616_0000027 3300053153 Bacteria 441053

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049569 Ga0501032_0010432 Ga0501032_0010432_5273_6670 383
2 3300037418 Ga0395900_0020238 Ga0395900_0020238_5550_6767 394
3 3300048908 Ga0496105_0246192 Ga0496105_0246192_195_1415 394
4 3300002737 JGI25162J39368_1006717 JGI25162J39368_10067171 395
5 3300002772 JGI25164J39214_1000186 JGI25164J39214_100018627 395
6 3300003214 JGI25165J46597_1000055 JGI25165J46597_1000055134 395
7 3300025231 Ga0207427_100054 Ga0207427_10005459 395
8 3300025233 Ga0209437_100339 Ga0209437_10033940 395
9 3300025261 Ga0209233_1000001 Ga0209233_1000001936 395
10 3300031548 Ga0307408_100128352 Ga0307408_1001283522 395
11 3300049528 Ga0501312_006323 Ga0501312_006323_225_1448 403
12 3300009101 Ga0105247_10024581 Ga0105247_100245813 408
13 3300009545 Ga0105237_10018488 Ga0105237_100184887 408
14 3300025914 Ga0207671_10033251 Ga0207671_100332514 408
15 3300053093 Ga0500651_0000316 Ga0500651_0000316_151_1491 408
16 3300044683 Ga0466965_0000010 Ga0466965_0000010_20405_21742 413
17 3300031731 Ga0307405_10048223 Ga0307405_100482233 415
18 3300031852 Ga0307410_10058573 Ga0307410_100585732 415
19 3300031911 Ga0307412_10060169 Ga0307412_100601692 415
20 3300032002 Ga0307416_100084331 Ga0307416_1000843313 416
21 3300037466 Ga0395898_0217771 Ga0395898_0217771_86_1426 416
22 3300044693 Ga0466961_0111682 Ga0466961_0111682_186_1526 416
23 3300038443 Ga0395901_0048166 Ga0395901_0048166_1993_3333 417
24 3300006051 Ga0075364_10037087 Ga0075364_100370872 418
25 3300037312 Ga0395899_0006337 Ga0395899_0006337_2920_4260 418
26 3300037418 Ga0395900_0002515 Ga0395900_0002515_13198_14538 418
27 3300037466 Ga0395898_0000321 Ga0395898_0000321_87507_88847 418
28 3300049574 Ga0501038_0006374 Ga0501038_0006374_1138_2478 418
29 3300049579 Ga0501043_0018108 Ga0501043_0018108_1093_2433 418
30 3300050491 nmdc:mga00v17_33862_c1 nmdc:mga00v17_33862_c1_759_2132 418
31 3300006946 Ga0079104_1000383 Ga0079104_100038321 420
32 3300027111 Ga0209281_1000143 Ga0209281_1000143136 420
33 3300042006 Ga0439432_010542 Ga0439432_010542_1637_3013 420
34 3300048924 Ga0496121_0000160 Ga0496121_0000160_36006_37382 420
35 3300048927 Ga0496124_0000935 Ga0496124_0000935_33138_34514 420
36 3300011119 Ga0105246_10122031 Ga0105246_101220312 421
37 3300025728 Ga0207655_1013970 Ga0207655_10139703 421
38 3300005367 Ga0070667_100025253 Ga0070667_1000252533 422
39 3300025986 Ga0207658_10005558 Ga0207658_100055588 422
40 3300031548 Ga0307408_100046944 Ga0307408_1000469442 423
41 3300048924 Ga0496121_0009807 Ga0496121_0009807_8180_9538 423
42 3300013307 Ga0157372_10092981 Ga0157372_100929812 425
43 3300042006 Ga0439432_003378 Ga0439432_003378_531_1907 425
44 3300041405 Ga0439438_000002 Ga0439438_000002_44127_45503 426
45 3300046530 Ga0495654_0014690 Ga0495654_0014690_1318_2694 426
46 3300049570 Ga0501033_0024243 Ga0501033_0024243_1494_2837 426
47 3300049571 Ga0501034_0137348 Ga0501034_0137348_327_1670 426
48 3300049572 Ga0501036_0005178 Ga0501036_0005178_6045_7388 426
49 3300049573 Ga0501037_0028598 Ga0501037_0028598_2027_3370 426
50 3300049575 Ga0501039_0065827 Ga0501039_0065827_1455_2798 426
51 3300049579 Ga0501043_0003724 Ga0501043_0003724_5569_6912 426
52 3300049581 Ga0501047_0005260 Ga0501047_0005260_9750_11093 426
53 3300049582 Ga0501048_0010138 Ga0501048_0010138_1715_3058 426
54 3300049822 Ga0501035_0006080 Ga0501035_0006080_7989_9332 426
55 3300049823 Ga0501044_0082205 Ga0501044_0082205_176_1519 426
56 3300005841 Ga0068863_100039807 Ga0068863_1000398075 427
57 3300013296 Ga0157374_10099478 Ga0157374_100994782 427
58 3300037466 Ga0395898_0125073 Ga0395898_0125073_59_1462 427
59 3300048904 Ga0496101_0111763 Ga0496101_0111763_320_1684 427
60 3300005842 Ga0068858_100000648 Ga0068858_10000064828 428
61 3300013104 Ga0157370_10098616 Ga0157370_100986162 428
62 3300026035 Ga0207703_10000238 Ga0207703_100002387 428
63 3300048928 Ga0496125_0006511 Ga0496125_0006511_6116_7492 429
64 3300027312 Ga0209371_1003001 Ga0209371_10030015 430
65 3300030500 Ga0268256_1002329 Ga0268256_10023294 430
66 3300037312 Ga0395899_0005721 Ga0395899_0005721_7292_8632 430
67 3300037466 Ga0395898_0001923 Ga0395898_0001923_9858_11198 430
68 3300038443 Ga0395901_0006032 Ga0395901_0006032_4403_5743 430
69 3300031548 Ga0307408_100003896 Ga0307408_1000038962 433
70 3300031903 Ga0307407_10047492 Ga0307407_100474922 433
71 3300006946 Ga0079104_1000030 Ga0079104_100003050 434
72 3300027111 Ga0209281_1000012 Ga0209281_1000012233 434
73 iso_pu_bacteria 2844841374 2844844959 435
74 iso_pu_bacteria 2904776348 2904778753 435
75 3300049571 Ga0501034_0107138 Ga0501034_0107138_825_2153 436
76 iso_pu_bacteria 2844852863 2844853903 437
77 iso_pu_bacteria 2910809715 2910811741 437
78 iso_pu_bacteria 2919034639 2919038587 437
79 iso_pu_bacteria 8054280661 8054283293 437
80 iso_pu_bacteria 2919059106 2919060288 438
81 3300025303 Ga0209051_1009292 Ga0209051_10092923 439
82 3300025728 Ga0207655_1008581 Ga0207655_10085813 439
83 3300026121 Ga0207683_10094825 Ga0207683_100948251 439
84 iso_pu_bacteria 2554235234 2555262397 439
85 iso_pu_bacteria 2600255287 2601646275 439
86 iso_pu_bacteria 2600255291 2601666275 439
87 iso_pu_bacteria 2600255298 2601699232 439
88 iso_pu_bacteria 2600255299 2601704140 439
89 iso_pu_bacteria 2600255303 2601724079 439
90 iso_pu_bacteria 2602042052 2603659005 439
91 iso_pu_bacteria 2602042053 2603663902 439
92 iso_pu_bacteria 2602042111 2603874525 439
93 iso_pu_bacteria 2603880184 2606068330 439
94 iso_pu_bacteria 2636415599 2637227826 439
95 iso_pu_bacteria 2643221676 2644428405 439
96 iso_pu_bacteria 2791355275 2793405554 439
97 iso_pu_bacteria 2808606357 2808829307 439
98 iso_pu_bacteria 2811994871 2812321315 439
99 iso_pu_bacteria 2844849076 2844850772 439
100 iso_pu_bacteria 2854601825 2854602495 439
101 iso_pu_bacteria 2857740372 2857741803 439
102 iso_pu_bacteria 2884086401 2884090445 439
103 iso_pu_bacteria 2888373701 2888374336 439
104 iso_pu_bacteria 2904513164 2904518236 439
105 iso_pu_bacteria 2906799679 2906800952 439
106 iso_pu_bacteria 2919108558 2919113860 439
107 iso_pu_bacteria 2919391150 2919394400 439
108 iso_pu_bacteria 2932426870 2932431127 439
109 iso_pu_bacteria 2933418574 2933419916 439
110 iso_pu_bacteria 2946037020 2946040115 439
111 iso_pu_bacteria 2953998280 2953999189 439
112 iso_pu_bacteria 2956897341 2956898320 439
113 iso_pu_bacteria 2971820967 2971826411 439
114 iso_pu_bacteria 8054107350 8054109813 439
115 3300010375 Ga0105239_10098105 Ga0105239_100981052 440
116 3300046457 Ga0495590_0000162 Ga0495590_0000162_28843_30171 440
117 iso_pu_bacteria 2939647034 2939650200 440
118 iso_pu_bacteria 2945941187 2945941906 440
119 iso_pu_bacteria 8004021418 8004024936 440
120 3300005614 Ga0068856_100076343 Ga0068856_1000763431 441
121 3300005616 Ga0068852_100000889 Ga0068852_10000088911 441
122 3300009551 Ga0105238_10003164 Ga0105238_100031648 441
123 3300010375 Ga0105239_10013291 Ga0105239_100132915 441
124 3300014969 Ga0157376_10069124 Ga0157376_100691242 441
125 3300025924 Ga0207694_10000222 Ga0207694_100002228 441
126 3300026142 Ga0207698_10000930 Ga0207698_100009308 441
127 3300041404 Ga0439436_0009411 Ga0439436_0009411_584_1939 441
128 3300041406 Ga0439439_0010404 Ga0439439_0010404_807_2162 441
129 3300041999 Ga0439433_0000163 Ga0439433_0000163_2687_4042 441
130 3300042007 Ga0439449_0001568 Ga0439449_0001568_1073_2428 441
131 3300042015 Ga0439462_0000494 Ga0439462_0000494_4345_5700 441
132 3300048908 Ga0496105_0050919 Ga0496105_0050919_74_1462 441
133 3300048918 Ga0496115_0071568 Ga0496115_0071568_858_2246 441
134 3300049589 Ga0501073_0000028 Ga0501073_0000028_38911_40251 441
135 3300005339 Ga0070660_100060713 Ga0070660_1000607135 442
136 3300009545 Ga0105237_10133946 Ga0105237_101339462 442
137 3300010375 Ga0105239_10133959 Ga0105239_101339592 442
138 3300025914 Ga0207671_10050261 Ga0207671_100502613 442
139 3300025919 Ga0207657_10060432 Ga0207657_100604323 442
140 3300031649 Ga0307514_10008221 Ga0307514_100082215 442
141 3300042122 Ga0450920_001297 Ga0450920_001297_2129_3490 442
142 3300048920 Ga0496117_0011580 Ga0496117_0011580_3144_4472 442
143 iso_pu_bacteria 2775506735 2775657561 442
144 3300002773 JGI25152J39213_1000233 JGI25152J39213_100023326 443
145 3300003316 rootH1_10040895 rootH1_100408953 443
146 3300005288 Ga0065714_10069033 Ga0065714_100690333 443
147 3300009011 Ga0105251_10001442 Ga0105251_1000144210 443
148 3300009011 Ga0105251_10015583 Ga0105251_100155834 443
149 3300009036 Ga0105244_10000157 Ga0105244_1000015710 443
150 3300009036 Ga0105244_10000390 Ga0105244_100003905 443
151 3300009036 Ga0105244_10005990 Ga0105244_100059901 443
152 3300009148 Ga0105243_10002764 Ga0105243_100027649 443
153 3300009148 Ga0105243_10269711 Ga0105243_102697111 443
154 3300010375 Ga0105239_10312356 Ga0105239_103123561 443
155 3300011119 Ga0105246_10006393 Ga0105246_100063935 443
156 3300011119 Ga0105246_10047237 Ga0105246_100472373 443
157 3300013102 Ga0157371_10000092 Ga0157371_10000092101 443
158 3300013306 Ga0163162_10003093 Ga0163162_1000309311 443
159 3300013306 Ga0163162_10111084 Ga0163162_101110842 443
160 3300013307 Ga0157372_10011318 Ga0157372_100113181 443
161 3300013308 Ga0157375_10008462 Ga0157375_100084626 443
162 3300015261 Ga0182006_1000144 Ga0182006_100014423 443
163 3300025258 Ga0209129_1000130 Ga0209129_1000130116 443
164 3300025294 Ga0209025_1000364 Ga0209025_100036410 443
165 3300025303 Ga0209051_1017013 Ga0209051_10170132 443
166 3300025315 Ga0207697_10031774 Ga0207697_100317742 443
167 3300025728 Ga0207655_1004736 Ga0207655_10047364 443
168 3300025735 Ga0207713_1000178 Ga0207713_100017851 443
169 3300025907 Ga0207645_10107987 Ga0207645_101079871 443
170 3300025972 Ga0207668_10139743 Ga0207668_101397431 443
171 3300031824 Ga0307413_10155506 Ga0307413_101555062 443
172 3300031852 Ga0307410_10096805 Ga0307410_100968051 443
173 3300031911 Ga0307412_10066713 Ga0307412_100667131 443
174 3300031995 Ga0307409_100211176 Ga0307409_1002111761 443
175 3300032002 Ga0307416_100072517 Ga0307416_1000725172 443
176 3300037312 Ga0395899_0078298 Ga0395899_0078298_80_1483 443
177 3300037418 Ga0395900_0023082 Ga0395900_0023082_2721_4061 443
178 3300037418 Ga0395900_0137009 Ga0395900_0137009_566_1918 443
179 3300037466 Ga0395898_0095659 Ga0395898_0095659_861_2213 443
180 3300037471 Ga0395905_0094533 Ga0395905_0094533_1089_2453 443
181 3300037471 Ga0395905_0129248 Ga0395905_0129248_383_1735 443
182 3300038443 Ga0395901_0037868 Ga0395901_0037868_1210_2574 443
183 3300038443 Ga0395901_0175410 Ga0395901_0175410_840_2192 443
184 3300038443 Ga0395901_0300785 Ga0395901_0300785_180_1520 443
185 3300042002 Ga0439442_000347 Ga0439442_000347_8092_9432 443
186 3300042007 Ga0439449_0005963 Ga0439449_0005963_2912_4252 443
187 3300042122 Ga0450920_000205 Ga0450920_000205_5431_6771 443
188 3300042146 Ga0450907_000260 Ga0450907_000260_5522_6862 443
189 3300042531 Ga0450918_004636 Ga0450918_004636_58_1398 443
190 3300046518 Ga0495631_0013566 Ga0495631_0013566_883_2223 443
191 3300046558 Ga0495633_0017453 Ga0495633_0017453_586_1926 443
192 3300046615 Ga0495656_0000594 Ga0495656_0000594_4499_5839 443
193 3300046691 Ga0495670_0001509 Ga0495670_0001509_7181_8521 443
194 3300046691 Ga0495670_0018796 Ga0495670_0018796_92_1432 443
195 3300047470 Ga0495681_0036588 Ga0495681_0036588_973_2313 443
196 3300048903 Ga0496100_0003679 Ga0496100_0003679_4820_6244 443
197 3300048903 Ga0496100_0004602 Ga0496100_0004602_461_1861 443
198 3300048904 Ga0496101_0002191 Ga0496101_0002191_4009_5433 443
199 3300048904 Ga0496101_0037737 Ga0496101_0037737_429_1829 443
200 3300048905 Ga0496102_0042101 Ga0496102_0042101_1207_2631 443
201 3300048905 Ga0496102_0046139 Ga0496102_0046139_2587_3927 443
202 3300048905 Ga0496102_0283425 Ga0496102_0283425_76_1419 443
203 3300048906 Ga0496103_0008137 Ga0496103_0008137_17_1441 443
204 3300048906 Ga0496103_0137310 Ga0496103_0137310_131_1471 443
205 3300048907 Ga0496104_0023393 Ga0496104_0023393_1290_2714 443
206 3300048908 Ga0496105_0004514 Ga0496105_0004514_7033_8457 443
207 3300048909 Ga0496106_0017983 Ga0496106_0017983_2155_3579 443
208 3300048910 Ga0496107_0000535 Ga0496107_0000535_1866_3290 443
209 3300048911 Ga0496108_0000982 Ga0496108_0000982_3641_5065 443
210 3300048912 Ga0496109_0003435 Ga0496109_0003435_3736_5160 443
211 3300048913 Ga0496110_0005416 Ga0496110_0005416_1635_3059 443
212 3300048914 Ga0496111_0024625 Ga0496111_0024625_557_1957 443
213 3300048915 Ga0496112_0046794 Ga0496112_0046794_1951_3321 443
214 3300048915 Ga0496112_0070161 Ga0496112_0070161_1105_2529 443
215 3300048916 Ga0496113_0024347 Ga0496113_0024347_1425_2849 443
216 3300048916 Ga0496113_0170265 Ga0496113_0170265_79_1419 443
217 3300048917 Ga0496114_0009713 Ga0496114_0009713_1363_2787 443
218 3300048917 Ga0496114_0085695 Ga0496114_0085695_1178_2578 443
219 3300048923 Ga0496120_0041181 Ga0496120_0041181_491_1855 443
220 3300049569 Ga0501032_0021602 Ga0501032_0021602_358_1689 443
221 3300049571 Ga0501034_0000038 Ga0501034_0000038_99790_101190 443
222 3300049573 Ga0501037_0003872 Ga0501037_0003872_7594_8925 443
223 3300049775 Ga0501279_005856 Ga0501279_005856_100_1443 443
224 3300053153 Ga0500616_0000027 Ga0500616_0000027_293749_295089 443
225 iso_pu_bacteria 2852632344 2852632661 443
226 iso_pu_bacteria 2945920336 2945924121 443
227 3300001989 JGI24739J22299_10038753 JGI24739J22299_100387532 444
228 3300002067 JGI24735J21928_10002952 JGI24735J21928_100029524 444
229 3300005614 Ga0068856_100371017 Ga0068856_1003710171 444
230 3300031548 Ga0307408_100101723 Ga0307408_1001017232 444
231 3300031903 Ga0307407_10021410 Ga0307407_100214102 444
232 3300032002 Ga0307416_100010062 Ga0307416_1000100627 444
233 3300042002 Ga0439442_000037 Ga0439442_000037_5465_6862 444
234 3300042007 Ga0439449_0000614 Ga0439449_0000614_2594_3973 444

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05048

NosD

Periplasmic copper-binding protein (NosD)

120

310

0.87

PF13229

Beta_helix

Right handed beta helix region

223

390

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
5zla-assembly1.cif.gz_B crystal structure of mutant c387a of dfa-iiiase from arthrobacter chlorophenolicus a6 in complex with dfa-iii 0.9532 3 438
5zl5-assembly1.cif.gz_B crystal structure of dfa-iiiase mutant c387a from arthrobacter chlorophenolicus a6 0.9516 3 438
5zkw-assembly1.cif.gz_D crystal structure of dfa-iiiase from arthrobacter chlorophenolicus a6 in complex with gf2 0.9514 3 438
5zku-assembly2.cif.gz_E crystal structure of dfa-iiiase from arthrobacter chlorophenolicus a6 in complex with dfa-iii 0.951 3 439
5zku-assembly1.cif.gz_A crystal structure of dfa-iiiase from arthrobacter chlorophenolicus a6 in complex with dfa-iii 0.951 5 439
ID Description Score Start End Superfamily
2inuC00 Mainly Beta;3 Solenoid;Pectate Lyase C-like;Single-stranded right-handed beta-helix, Pectin lyase-like 0.9101 5 436 2.160.20.10
2inuC00 Mainly Beta;3 Solenoid;Pectate Lyase C-like;Single-stranded right-handed beta-helix, Pectin lyase-like 0.9056 5 436 2.160.20.10
af_Q4CXD0_11_257_2.160.20.10 Mainly Beta;3 Solenoid;Pectate Lyase C-like;Single-stranded right-handed beta-helix, Pectin lyase-like 0.7532 44 367 2.160.20.10
af_A4I4X9_9_274_2.160.20.10 Mainly Beta;3 Solenoid;Pectate Lyase C-like;Single-stranded right-handed beta-helix, Pectin lyase-like 0.7351 35 381 2.160.20.10
af_A4I4X9_9_274_2.160.20.10 Mainly Beta;3 Solenoid;Pectate Lyase C-like;Single-stranded right-handed beta-helix, Pectin lyase-like 0.6992 35 381 2.160.20.10
ID Description Score Start End GO Terms
AF-A0A1C7GMU7-F1-model_v4 T-Q ester bond containing domain-containing protein 0.9791 190 306
AF-A0A7Z8ZFB2-F1-model_v4 Inulin fructotransferase [DFA-I-forming] (EC 4.2.2.17) 0.9631 181 439 GO:0016740
GO:0033997
AF-A0A2K9DMP1-F1-model_v4 Right-handed parallel beta-helix repeat-containing protein 0.9617 258 440
AF-A0A2J5PTG1-F1-model_v4 Fructotransferase 0.9541 100 440 GO:0016740
AF-A0A2K9DMP1-F1-model_v4 Right-handed parallel beta-helix repeat-containing protein 0.9515 258 440

Feature Viewer

pLDDT pTM Quality
86.88 0.89 High
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Predicted Structure (AlphaFold2)

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