F346050

General Info

Members Datasets Scaffolds Average Seq Length
233 145 466 421

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10219646|Ga0114129_102196462
Length 461
Sequence VLLSCDYIGPVKFGIFYEHQMGRPWEAESEQRLIQDALEQVALADRLGIQFVWEVEHHFLEEYSHSSAPEVFLAACSQRTERIRLGHGIILTAPNFNHPARTAERVAMLDLVSSGRVEFGSGESSSEAELAGFGIDPALKREQWLEGLEVALRCMVEQPFTGVDGEYVKMPPRNVVPKPVQKPHPPLWVACSRRETILLAAQKGMGALTFAFIDPEEARTWVEAYENTLASSCVPVGWSVNPQVACVSPMMLHHEEDEAIRRGVEGANFFGYSLGHFYVFGEHRPGVTDVWSEYEQRRAAQGFDPEAVARAVKEERLGAKVAAGDTTGLRGAIGTPEQVREYLRRYEEAGVDQVIFVLQAGRNRHEHIMESLEVFGREVLPEFLDRDAAATAAKVSRLAPVIEAALARKDYEPRDLGDYSFPAIPRQWADAAGSEEMRAWLDRFADDRAAGRRDTELGIAG

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
17 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
29 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
30 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
31 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
89 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
90 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
91 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
92 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
93 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
94 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
95 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
96 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
97 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
98 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
101 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
102 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
103 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
104 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
105 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
106 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
107 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
108 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
109 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
110 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
111 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
112 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
113 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
114 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
115 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
118 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
119 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
120 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
126 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
127 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
128 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
129 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
130 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
131 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
134 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
135 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
136 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
137 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
138 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
139 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
140 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
141 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
142 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
143 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
144 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
145 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.57
Metatranscriptomes 0.43
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.73
Nodule 0
Rhizoplane 4.29
Rhizosphere 84.55
Stem 0
Stem Tuber 0
Unclassified 0.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10219646 3300009147 Bacteria 2564
2 Ga0070683_100008757 3300005329 Bacteria 8603
3 Ga0070683_100020215 3300005329 Bacteria 5924
4 Ga0070683_100104217 3300005329 Bacteria 2673
5 Ga0070670_100066521 3300005331 Bacteria 3093
6 Ga0070670_100137591 3300005331 Bacteria 2111
7 Ga0068869_100017652 3300005334 Bacteria 4842
8 Ga0068869_100063311 3300005334 Bacteria 2717
9 Ga0068869_100066114 3300005334 Bacteria 2663
10 Ga0070680_100173077 3300005336 Bacteria 1817
11 Ga0070691_10055303 3300005341 Bacteria 1901
12 Ga0070671_100023558 3300005355 Bacteria 5039
13 Ga0070688_100082382 3300005365 Bacteria 2085
14 Ga0070709_10011619 3300005434 Bacteria 4913
15 Ga0070713_100239908 3300005436 Bacteria 1650
16 Ga0070681_10003140 3300005458 Bacteria 15349
17 Ga0070706_100191473 3300005467 Bacteria 1911
18 Ga0070698_100081425 3300005471 Bacteria 3232
19 Ga0070679_100003102 3300005530 Bacteria 15186
20 Ga0070684_100002673 3300005535 Bacteria 13161
21 Ga0070684_100021454 3300005535 Bacteria 5376
22 Ga0070684_100153181 3300005535 Bacteria 2089
23 Ga0070672_100163545 3300005543 Bacteria 1848
24 Ga0070704_100028974 3300005549 Bacteria 3691
25 Ga0068855_100003456 3300005563 Bacteria 19328
26 Ga0068855_100016095 3300005563 Bacteria 8993
27 Ga0070664_100018135 3300005564 Bacteria 5777
28 Ga0068856_100056798 3300005614 Bacteria 3863
29 Ga0068856_100086348 3300005614 Bacteria 3117
30 Ga0068852_100011407 3300005616 Bacteria 6689
31 Ga0068852_100159432 3300005616 Bacteria 2105
32 Ga0068859_100126719 3300005617 Bacteria 2622
33 Ga0068864_100016879 3300005618 Bacteria 6085
34 Ga0068864_100093846 3300005618 Bacteria 2651
35 Ga0068863_100142927 3300005841 Bacteria 2288
36 Ga0068860_100004664 3300005843 Bacteria 13993
37 Ga0068860_100162373 3300005843 Bacteria 2154
38 Ga0068862_100015044 3300005844 Bacteria 6426
39 Ga0068862_100078154 3300005844 Bacteria 2867
40 Ga0070717_10007010 3300006028 Bacteria 8341
41 Ga0075365_10000964 3300006038 Bacteria 12223
42 Ga0075365_10008295 3300006038 Bacteria 5887
43 Ga0075365_10059937 3300006038 Bacteria 2538
44 Ga0075364_10002953 3300006051 Bacteria 9592
45 Ga0075364_10004096 3300006051 Bacteria 8363
46 Ga0075364_10005426 3300006051 Bacteria 7409
47 Ga0075364_10088761 3300006051 Bacteria 2050
48 Ga0075364_10114858 3300006051 Bacteria 1799
49 Ga0070712_100058461 3300006175 Bacteria 2712
50 Ga0075362_10006810 3300006177 Bacteria 4276
51 Ga0075362_10009954 3300006177 Bacteria 3695
52 Ga0075362_10011175 3300006177 Bacteria 3531
53 Ga0075367_10001816 3300006178 Bacteria 9401
54 Ga0075367_10034010 3300006178 Bacteria 2941
55 Ga0075367_10052826 3300006178 Bacteria 2407
56 Ga0075367_10097961 3300006178 Bacteria 1790
57 Ga0068871_100048158 3300006358 Bacteria 3439
58 Ga0068871_100091848 3300006358 Bacteria 2531
59 Ga0075428_100000151 3300006844 Bacteria 62789
60 Ga0075428_100163901 3300006844 Bacteria 2412
61 Ga0075430_100002139 3300006846 Bacteria 16354
62 Ga0075431_100000246 3300006847 Bacteria 41024
63 Ga0097620_100126720 3300006931 Bacteria 2622
64 Ga0105240_10002380 3300009093 Bacteria 30325
65 Ga0105245_10000552 3300009098 Bacteria 34005
66 Ga0105245_10003038 3300009098 Bacteria 15041
67 Ga0105245_10015652 3300009098 Bacteria 6616
68 Ga0105245_10016099 3300009098 Bacteria 6515
69 Ga0105243_10004472 3300009148 Bacteria 11052
70 Ga0105242_10008548 3300009176 Bacteria 7864
71 Ga0105242_10016460 3300009176 Bacteria 5749
72 Ga0105242_10117221 3300009176 Bacteria 2279
73 Ga0105248_10004481 3300009177 Bacteria 15455
74 Ga0105248_10025508 3300009177 Bacteria 6572
75 Ga0105237_10069770 3300009545 Bacteria 3509
76 Ga0105237_10128099 3300009545 Bacteria 2532
77 Ga0105237_10157785 3300009545 Unclassified 2266
78 Ga0105238_10044470 3300009551 Bacteria 4489
79 Ga0105238_10070243 3300009551 Bacteria 3501
80 Ga0105249_10004159 3300009553 Bacteria 12499
81 Ga0105249_10006339 3300009553 Bacteria 10282
82 Ga0105249_10109521 3300009553 Bacteria 2609
83 Ga0105239_10014790 3300010375 Bacteria 8655
84 Ga0105239_10110870 3300010375 Bacteria 3041
85 Ga0105239_10224594 3300010375 Bacteria 2106
86 Ga0157371_10045695 3300013102 Bacteria 3116
87 Ga0157370_10001596 3300013104 Bacteria 28016
88 Ga0157369_10003806 3300013105 Bacteria 17917
89 Ga0157369_10006828 3300013105 Bacteria 13164
90 Ga0157369_10049025 3300013105 Bacteria 4580
91 Ga0157369_10068131 3300013105 Bacteria 3823
92 Ga0157374_10004424 3300013296 Bacteria 11817
93 Ga0157374_10124330 3300013296 Bacteria 2492
94 Ga0157378_10000477 3300013297 Bacteria 38086
95 Ga0157378_10002879 3300013297 Bacteria 15314
96 Ga0157375_10003268 3300013308 Bacteria 14059
97 Ga0157375_10216047 3300013308 Bacteria 2075
98 Ga0163163_10004749 3300014325 Bacteria 11650
99 Ga0163163_10321229 3300014325 Bacteria 1602
100 Ga0206350_11157804 3300020080 Bacteria 1518
101 Ga0207684_10230396 3300025910 Bacteria 1598
102 Ga0207707_10001047 3300025912 Bacteria 26538
103 Ga0207693_10002285 3300025915 Bacteria 16669
104 Ga0207660_10006086 3300025917 Bacteria 7829
105 Ga0207657_10030623 3300025919 Bacteria 4882
106 Ga0207649_10062193 3300025920 Bacteria 2353
107 Ga0207652_10009740 3300025921 Bacteria 7731
108 Ga0207646_10205118 3300025922 Bacteria 1781
109 Ga0207694_10001067 3300025924 Bacteria 23855
110 Ga0207694_10019913 3300025924 Bacteria 5076
111 Ga0207694_10042774 3300025924 Bacteria 3495
112 Ga0207650_10110356 3300025925 Bacteria 2128
113 Ga0207687_10007573 3300025927 Bacteria 7139
114 Ga0207687_10019007 3300025927 Bacteria 4546
115 Ga0207687_10026669 3300025927 Bacteria 3871
116 Ga0207687_10088198 3300025927 Bacteria 2256
117 Ga0207690_10021464 3300025932 Bacteria 4005
118 Ga0207706_10071909 3300025933 Bacteria 3042
119 Ga0207686_10004088 3300025934 Bacteria 7834
120 Ga0207686_10030792 3300025934 Bacteria 3181
121 Ga0207709_10113588 3300025935 Bacteria 1816
122 Ga0207711_10001158 3300025941 Bacteria 25079
123 Ga0207711_10004792 3300025941 Bacteria 11485
124 Ga0207689_10014523 3300025942 Bacteria 6698
125 Ga0207689_10049996 3300025942 Bacteria 3448
126 Ga0207689_10092317 3300025942 Bacteria 2487
127 Ga0207661_10007772 3300025944 Bacteria 7636
128 Ga0207661_10009883 3300025944 Bacteria 6853
129 Ga0207661_10014436 3300025944 Bacteria 5791
130 Ga0207679_10193351 3300025945 Bacteria 1694
131 Ga0207667_10000289 3300025949 Bacteria 69596
132 Ga0207667_10000366 3300025949 Bacteria 61008
133 Ga0207667_10007491 3300025949 Bacteria 13101
134 Ga0207667_10013621 3300025949 Bacteria 9296
135 Ga0207712_10003272 3300025961 Bacteria 10278
136 Ga0207658_10260520 3300025986 Bacteria 1478
137 Ga0207677_10091251 3300026023 Bacteria 2215
138 Ga0207677_10195353 3300026023 Bacteria 1604
139 Ga0207703_10063831 3300026035 Bacteria 3021
140 Ga0207703_10155020 3300026035 Bacteria 2001
141 Ga0207639_10048669 3300026041 Bacteria 3210
142 Ga0207639_10056866 3300026041 Bacteria 3000
143 Ga0207702_10137194 3300026078 Bacteria 2209
144 Ga0207648_10041598 3300026089 Bacteria 4036
145 Ga0207648_10132754 3300026089 Bacteria 2192
146 Ga0207676_10078408 3300026095 Bacteria 2676
147 Ga0207676_10094732 3300026095 Bacteria 2461
148 Ga0207674_10023083 3300026116 Bacteria 6671
149 Ga0207675_100041576 3300026118 Bacteria 4293
150 Ga0207698_10016967 3300026142 Bacteria 4927
151 Ga0207698_10120048 3300026142 Bacteria 2223
152 Ga0268265_10037198 3300028380 Bacteria 3571
153 Ga0268264_10014796 3300028381 Bacteria 6408
154 Ga0265338_10016077 3300028800 Bacteria 8168
155 Ga0265332_10033322 3300031238 Bacteria 2243
156 Ga0265325_10002145 3300031241 Bacteria 13452
157 Ga0265339_10016688 3300031249 Bacteria 4369
158 Ga0265327_10005205 3300031251 Bacteria 10981
159 Ga0265316_10037110 3300031344 Bacteria 3937
160 Ga0265313_10001701 3300031595 Bacteria 20283
161 Ga0265313_10019559 3300031595 Bacteria 3763
162 Ga0265314_10000978 3300031711 Bacteria 33599
163 Ga0373926_0041734 3300035083 Bacteria 1640
164 Ga0373934_0005293 3300035086 Bacteria 4773
165 Ga0373954_0007830 3300035118 Bacteria 4679
166 Ga0373937_0003130 3300036401 Bacteria 13842
167 Ga0373937_0018321 3300036401 Bacteria 6251
168 Ga0373937_0051124 3300036401 Bacteria 3788
169 Ga0373937_0191682 3300036401 Bacteria 1921
170 Ga0373925_0019345 3300037068 Bacteria 4953
171 Ga0373925_0045814 3300037068 Unclassified 3250
172 Ga0436360_0645661 3300039438 Bacteria 4411
173 Ga0436362_0942678 3300039453 Bacteria 3338
174 Ga0466967_0025814 3300045976 Bacteria 4851
175 Ga0495592_0059405 3300046454 Bacteria 2816
176 Ga0495580_0023456 3300046472 Bacteria 4530
177 Ga0495580_0113859 3300046472 Bacteria 1879
178 Ga0495587_0002695 3300046536 Bacteria 11853
179 Ga0495621_0002845 3300046539 Bacteria 4709
180 Ga0495634_0027653 3300046642 Bacteria 3945
181 Ga0495613_0002474 3300046689 Bacteria 13931
182 Ga0495672_0003299 3300047320 Bacteria 13955
183 Ga0495680_0062025 3300047322 Bacteria 2875
184 Ga0495602_0019648 3300048088 Bacteria 6699
185 Ga0496109_0006787 3300048912 Bacteria 9645
186 Ga0496109_0214342 3300048912 Bacteria 1811
187 Ga0496110_0033092 3300048913 Bacteria 4470
188 Ga0496111_0033470 3300048914 Bacteria 3666
189 Ga0496112_0003300 3300048915 Bacteria 13320
190 Ga0496112_0020634 3300048915 Bacteria 6248
191 Ga0496112_0023400 3300048915 Bacteria 5903
192 Ga0496112_0044475 3300048915 Bacteria 4351
193 Ga0496113_0017631 3300048916 Bacteria 4962
194 Ga0496114_0226307 3300048917 Bacteria 1643
195 Ga0496126_0033173 3300048929 Plasmid 4859
196 Ga0501034_0075504 3300049571 Bacteria 3378
197 Ga0501036_0019943 3300049572 Bacteria 5629
198 Ga0501036_0127080 3300049572 Bacteria 2153
199 Ga0501039_0090712 3300049575 Bacteria 2382
200 Ga0501041_0045385 3300049577 Bacteria 2672
201 Ga0501048_0087367 3300049582 Bacteria 2200
202 Ga0501069_0000756 3300049585 Bacteria 15100
203 Ga0501070_0001192 3300049586 Bacteria 23236
204 Ga0501071_0008755 3300049587 Bacteria 6701
205 Ga0501071_0027321 3300049587 Bacteria 4015
206 Ga0501072_0026849 3300049588 Bacteria 4492
207 Ga0501075_0022075 3300049591 Bacteria 4646
208 Ga0501075_0134195 3300049591 Bacteria 1886
209 Ga0501077_0095734 3300049593 Bacteria 1882
210 Ga0501079_0046151 3300049741 Bacteria 3361
211 Ga0501079_0124797 3300049741 Bacteria 2003
212 Ga0501080_0021569 3300049742 Bacteria 5961
213 Ga0501081_0065608 3300049743 Bacteria 2524
214 Ga0501083_0002269 3300049744 Bacteria 13139
215 nmdc:mga03683_1402_c1 3300050489 Bacteria 4861
216 nmdc:mga00v17_15875_c1 3300050491 Bacteria 4237
217 nmdc:mga00v17_3504_c1 3300050491 Bacteria 8117
218 nmdc:mga00v17_5996_c1 3300050491 Bacteria 6430
219 nmdc:mga00v17_6118_c1 3300050491 Bacteria 6373
220 nmdc:mga0yw44_106752_c1 3300050492 Bacteria 1790
221 nmdc:mga0yw44_29330_c1 3300050492 Bacteria 3175
222 nmdc:mga0yw44_9137_c1 3300050492 Bacteria 4988
223 nmdc:mga06z11_101036_c1 3300050494 Bacteria 1582
224 nmdc:mga06z11_49186_c1 3300050494 Bacteria 2149
225 nmdc:mga0qj67_4335_c1 3300050509 Bacteria 10277
226 nmdc:mga06r32_515_c1 3300050510 Bacteria 33313
227 Ga0495601_0014683 3300053077 Bacteria 4724
228 Ga0495619_0014896 3300053085 Bacteria 4911
229 Ga0495619_0073930 3300053085 Bacteria 2285
230 Ga0501084_0000360 3300054114 Bacteria 34776
231 Ga0501082_0036632 3300060353 Bacteria 4226
232 Ga0530510_0006317 3300061734 Bacteria 8245
233 Ga0530510_0041171 3300061734 Bacteria 3336
234 Ga0114129_10219646
235 Ga0070683_100008757
236 Ga0070683_100020215
237 Ga0070683_100104217
238 Ga0070670_100066521
239 Ga0070670_100137591
240 Ga0068869_100017652
241 Ga0068869_100063311
242 Ga0068869_100066114
243 Ga0070680_100173077
244 Ga0070691_10055303
245 Ga0070671_100023558
246 Ga0070688_100082382
247 Ga0070709_10011619
248 Ga0070713_100239908
249 Ga0070681_10003140
250 Ga0070706_100191473
251 Ga0070698_100081425
252 Ga0070679_100003102
253 Ga0070684_100002673
254 Ga0070684_100021454
255 Ga0070684_100153181
256 Ga0070672_100163545
257 Ga0070704_100028974
258 Ga0068855_100003456
259 Ga0068855_100016095
260 Ga0070664_100018135
261 Ga0068856_100056798
262 Ga0068856_100086348
263 Ga0068852_100011407
264 Ga0068852_100159432
265 Ga0068859_100126719
266 Ga0068864_100016879
267 Ga0068864_100093846
268 Ga0068863_100142927
269 Ga0068860_100004664
270 Ga0068860_100162373
271 Ga0068862_100015044
272 Ga0068862_100078154
273 Ga0070717_10007010
274 Ga0075365_10000964
275 Ga0075365_10008295
276 Ga0075365_10059937
277 Ga0075364_10002953
278 Ga0075364_10004096
279 Ga0075364_10005426
280 Ga0075364_10088761
281 Ga0075364_10114858
282 Ga0070712_100058461
283 Ga0075362_10006810
284 Ga0075362_10009954
285 Ga0075362_10011175
286 Ga0075367_10001816
287 Ga0075367_10034010
288 Ga0075367_10052826
289 Ga0075367_10097961
290 Ga0068871_100048158
291 Ga0068871_100091848
292 Ga0075428_100000151
293 Ga0075428_100163901
294 Ga0075430_100002139
295 Ga0075431_100000246
296 Ga0097620_100126720
297 Ga0105240_10002380
298 Ga0105245_10000552
299 Ga0105245_10003038
300 Ga0105245_10015652
301 Ga0105245_10016099
302 Ga0105243_10004472
303 Ga0105242_10008548
304 Ga0105242_10016460
305 Ga0105242_10117221
306 Ga0105248_10004481
307 Ga0105248_10025508
308 Ga0105237_10069770
309 Ga0105237_10128099
310 Ga0105237_10157785
311 Ga0105238_10044470
312 Ga0105238_10070243
313 Ga0105249_10004159
314 Ga0105249_10006339
315 Ga0105249_10109521
316 Ga0105239_10014790
317 Ga0105239_10110870
318 Ga0105239_10224594
319 Ga0157371_10045695
320 Ga0157370_10001596
321 Ga0157369_10003806
322 Ga0157369_10006828
323 Ga0157369_10049025
324 Ga0157369_10068131
325 Ga0157374_10004424
326 Ga0157374_10124330
327 Ga0157378_10000477
328 Ga0157378_10002879
329 Ga0157375_10003268
330 Ga0157375_10216047
331 Ga0163163_10004749
332 Ga0163163_10321229
333 Ga0206350_11157804
334 Ga0207684_10230396
335 Ga0207707_10001047
336 Ga0207693_10002285
337 Ga0207660_10006086
338 Ga0207657_10030623
339 Ga0207649_10062193
340 Ga0207652_10009740
341 Ga0207646_10205118
342 Ga0207694_10001067
343 Ga0207694_10019913
344 Ga0207694_10042774
345 Ga0207650_10110356
346 Ga0207687_10007573
347 Ga0207687_10019007
348 Ga0207687_10026669
349 Ga0207687_10088198
350 Ga0207690_10021464
351 Ga0207706_10071909
352 Ga0207686_10004088
353 Ga0207686_10030792
354 Ga0207709_10113588
355 Ga0207711_10001158
356 Ga0207711_10004792
357 Ga0207689_10014523
358 Ga0207689_10049996
359 Ga0207689_10092317
360 Ga0207661_10007772
361 Ga0207661_10009883
362 Ga0207661_10014436
363 Ga0207679_10193351
364 Ga0207667_10000289
365 Ga0207667_10000366
366 Ga0207667_10007491
367 Ga0207667_10013621
368 Ga0207712_10003272
369 Ga0207658_10260520
370 Ga0207677_10091251
371 Ga0207677_10195353
372 Ga0207703_10063831
373 Ga0207703_10155020
374 Ga0207639_10048669
375 Ga0207639_10056866
376 Ga0207702_10137194
377 Ga0207648_10041598
378 Ga0207648_10132754
379 Ga0207676_10078408
380 Ga0207676_10094732
381 Ga0207674_10023083
382 Ga0207675_100041576
383 Ga0207698_10016967
384 Ga0207698_10120048
385 Ga0268265_10037198
386 Ga0268264_10014796
387 Ga0265338_10016077
388 Ga0265332_10033322
389 Ga0265325_10002145
390 Ga0265339_10016688
391 Ga0265327_10005205
392 Ga0265316_10037110
393 Ga0265313_10001701
394 Ga0265313_10019559
395 Ga0265314_10000978
396 Ga0373926_0041734
397 Ga0373934_0005293
398 Ga0373954_0007830
399 Ga0373937_0003130
400 Ga0373937_0018321
401 Ga0373937_0051124
402 Ga0373937_0191682
403 Ga0373925_0019345
404 Ga0373925_0045814
405 Ga0436360_0645661
406 Ga0436362_0942678
407 Ga0466967_0025814
408 Ga0495592_0059405
409 Ga0495580_0023456
410 Ga0495580_0113859
411 Ga0495587_0002695
412 Ga0495621_0002845
413 Ga0495634_0027653
414 Ga0495613_0002474
415 Ga0495672_0003299
416 Ga0495680_0062025
417 Ga0495602_0019648
418 Ga0496109_0006787
419 Ga0496109_0214342
420 Ga0496110_0033092
421 Ga0496111_0033470
422 Ga0496112_0003300
423 Ga0496112_0020634
424 Ga0496112_0023400
425 Ga0496112_0044475
426 Ga0496113_0017631
427 Ga0496114_0226307
428 Ga0496126_0033173
429 Ga0501034_0075504
430 Ga0501036_0019943
431 Ga0501036_0127080
432 Ga0501039_0090712
433 Ga0501041_0045385
434 Ga0501048_0087367
435 Ga0501069_0000756
436 Ga0501070_0001192
437 Ga0501071_0008755
438 Ga0501071_0027321
439 Ga0501072_0026849
440 Ga0501075_0022075
441 Ga0501075_0134195
442 Ga0501077_0095734
443 Ga0501079_0046151
444 Ga0501079_0124797
445 Ga0501080_0021569
446 Ga0501081_0065608
447 Ga0501083_0002269
448 nmdc:mga03683_1402_c1
449 nmdc:mga00v17_15875_c1
450 nmdc:mga00v17_3504_c1
451 nmdc:mga00v17_5996_c1
452 nmdc:mga00v17_6118_c1
453 nmdc:mga0yw44_106752_c1
454 nmdc:mga0yw44_29330_c1
455 nmdc:mga0yw44_9137_c1
456 nmdc:mga06z11_101036_c1
457 nmdc:mga06z11_49186_c1
458 nmdc:mga0qj67_4335_c1
459 nmdc:mga06r32_515_c1
460 Ga0495601_0014683
461 Ga0495619_0014896
462 Ga0495619_0073930
463 Ga0501084_0000360
464 Ga0501082_0036632
465 Ga0530510_0006317
466 Ga0530510_0041171

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00296

Bac_luciferase

Luciferase-like monooxygenase

11

353

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
1luc-assembly1.cif.gz_A bacterial luciferase 0.8499 1 350
1brl-assembly2.cif.gz_C three-dimensional structure of bacterial luciferase from vibrio harveyi at 2.4 angstroms resolution 0.8381 1 350
3fgc-assembly1.cif.gz_A crystal structure of the bacterial luciferase:flavin complex reveals the basis of intersubunit communication 0.8348 1 350
1luc-assembly1.cif.gz_A bacterial luciferase 0.8329 1 350
3fgc-assembly2.cif.gz_C crystal structure of the bacterial luciferase:flavin complex reveals the basis of intersubunit communication 0.8282 1 350
ID Description Score Start End Superfamily
3fgcC00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8282 1 350 3.20.20.30
af_I6XG43_1_274_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8218 1 350 3.20.20.30
af_I6XG43_1_274_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8171 1 350 3.20.20.30
2i7gA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.817 1 350 3.20.20.30
3fgcC00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8126 1 350 3.20.20.30
ID Description Score Start End GO Terms
AF-A0A538HM95-F1-model_v4 LLM class flavin-dependent oxidoreductase 0.9808 1 76 GO:0004497
GO:0005829
GO:0016705
AF-A0A7K0SFC1-F1-model_v4 LLM class flavin-dependent oxidoreductase 0.9729 1 285 GO:0004497
GO:0005829
GO:0016705
AF-A0A6B0YF89-F1-model_v4 deleted 0.9715 1 79
AF-A0A538HM95-F1-model_v4 LLM class flavin-dependent oxidoreductase 0.9682 1 76 GO:0004497
GO:0005829
GO:0016705
AF-A0A3D0IAB0-F1-model_v4 LLM class flavin-dependent oxidoreductase 0.9548 1 179 GO:0004497
GO:0005829
GO:0016705

Map