F345645

General Info

Members Datasets Scaffolds Average Seq Length
232 157 464 460

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2939582691|2939585338
Length 499
Sequence GQLLFVHYPPRKVGCHMTAENVADPATAHEQSQGSGSEPELKRTLGSFQVFAISFAFISVAVGIFATYDDVLVSAGPVGIWLWIAAAVGQGLVALVVAQFAARIALSGSSYQWASRLASPRIGWLFGWLTFWYLAIAVVALDNALASQALMPLLGMAEDEGTARLITVAIMIVQAALVIASTRLLGMITSGAVGVELAIVVVLVIGLAAVMVFTGSGDVDNLTSRGITADSPDYFAIGGGLMAGMIMGLTTLVGFDSAANLAEEAKDPFRSVPRAIVASVVAAGVLGLVFLIALTVAIKDVTAVSTGGSPVAAIIRSQLGPVAERILLAGLVFAMFGAGMVVMAACSRQVFAMARDGRFPAHALMRRVNPRTQTPVPATILILAVGIVLMLALPGEALLQLIIGSTILPALIYGAIVILYLVVRKRLEHKEGGFSLGRFELPVAVAAMIWVAFVLFVLVTPEAAFVPVLIVLGLILAGGVYFATMLVFHREVLDAEATE

Samples

Sample ID Description Type Environment
1 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
2 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
3 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
34 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
51 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
52 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
53 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
81 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
82 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
83 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
84 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
85 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
86 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
87 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
88 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
89 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
90 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
91 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
92 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
93 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
94 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
95 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
96 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
97 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
98 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
99 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
100 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
101 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
102 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
103 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
104 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
105 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
106 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
107 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
108 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
109 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
110 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
111 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
112 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
113 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
114 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
115 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
116 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
117 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
118 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
119 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
120 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
121 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
129 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
130 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
131 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
132 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
133 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
134 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
135 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
136 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
137 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
138 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
139 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
140 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
141 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
142 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
143 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
144 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
145 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere
146 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
147 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
148 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
149 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
150 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
151 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
152 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
153 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
154 2902792274 Mycolicibacterium sp. P9-64 Isolate Unclassified
155 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
156 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
157 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.1
Metatranscriptomes 0
Isolates 6.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.38
Nodule 0
Rhizoplane 11.64
Rhizosphere 55.17
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24746J21847_1001628 3300001977 Bacteria 3591
2 JGI24744J21845_10006347 3300002077 Bacteria 2455
3 Ga0055540_1000038 3300003792 Bacteria 161988
4 Ga0055540_1001445 3300003792 Bacteria 14162
5 Ga0055540_1004522 3300003792 Bacteria 6219
6 Ga0068869_100014862 3300005334 Bacteria 5204
7 Ga0070666_10011571 3300005335 Bacteria 5543
8 Ga0070682_100037756 3300005337 Bacteria 2959
9 Ga0070682_100134947 3300005337 Bacteria 1675
10 Ga0068868_100076371 3300005338 Bacteria 2678
11 Ga0070689_100169346 3300005340 Bacteria 1769
12 Ga0070668_100092846 3300005347 Bacteria 2381
13 Ga0070669_100046799 3300005353 Bacteria 3154
14 Ga0070673_100093625 3300005364 Bacteria 2461
15 Ga0070667_100000477 3300005367 Bacteria 41141
16 Ga0070667_100006197 3300005367 Bacteria 9948
17 Ga0070667_100034968 3300005367 Bacteria 4208
18 Ga0070710_10051699 3300005437 Bacteria 2308
19 Ga0070700_100023945 3300005441 Bacteria 3578
20 Ga0070663_100086581 3300005455 Bacteria 2314
21 Ga0070678_100024962 3300005456 Bacteria 4012
22 Ga0070662_100056949 3300005457 Bacteria 2838
23 Ga0070685_10020274 3300005466 Bacteria 3598
24 Ga0068853_100103385 3300005539 Bacteria 2521
25 Ga0068853_100230654 3300005539 Bacteria 1694
26 Ga0070672_100172759 3300005543 Bacteria 1798
27 Ga0070665_100007780 3300005548 Bacteria 10888
28 Ga0070665_100008645 3300005548 Bacteria 10306
29 Ga0070665_100068535 3300005548 Bacteria 3557
30 Ga0070704_100087288 3300005549 Bacteria 2315
31 Ga0070704_100100352 3300005549 Bacteria 2179
32 Ga0068859_100001411 3300005617 Bacteria 24387
33 Ga0068861_100041077 3300005719 Bacteria 3463
34 Ga0068861_100043448 3300005719 Bacteria 3374
35 Ga0068863_100003552 3300005841 Bacteria 15379
36 Ga0068858_100023659 3300005842 Bacteria 5723
37 Ga0068858_100142212 3300005842 Bacteria 2253
38 Ga0068860_100000025 3300005843 Bacteria 271553
39 Ga0068862_100000045 3300005844 Bacteria 155641
40 Ga0081455_10012108 3300005937 Bacteria 8622
41 Ga0075365_10020490 3300006038 Bacteria 4101
42 Ga0075365_10044022 3300006038 Bacteria 2924
43 Ga0075363_100002170 3300006048 Bacteria 7899
44 Ga0075363_100012538 3300006048 Bacteria 4091
45 Ga0075363_100080192 3300006048 Bacteria 1784
46 Ga0075364_10013732 3300006051 Bacteria 4988
47 Ga0075364_10018440 3300006051 Bacteria 4368
48 Ga0075367_10014659 3300006178 Bacteria 4244
49 Ga0075370_10006186 3300006353 Bacteria 6006
50 Ga0075370_10027454 3300006353 Bacteria 3158
51 Ga0075370_10034092 3300006353 Bacteria 2853
52 Ga0068865_100116848 3300006881 Bacteria 1976
53 Ga0097620_100001411 3300006931 Bacteria 24387
54 Ga0111539_10130206 3300009094 Bacteria 2946
55 Ga0105245_10176274 3300009098 Bacteria 2039
56 Ga0105247_10000010 3300009101 Bacteria 302475
57 Ga0105243_10132357 3300009148 Bacteria 2117
58 Ga0105248_10000100 3300009177 Bacteria 95523
59 Ga0105237_10001483 3300009545 Bacteria 30924
60 Ga0105237_10012679 3300009545 Bacteria 8872
61 Ga0105237_10102403 3300009545 Bacteria 2855
62 Ga0105249_10000010 3300009553 Bacteria 306939
63 Ga0105249_10146803 3300009553 Bacteria 2267
64 Ga0099796_10008847 3300010159 Bacteria 2701
65 Ga0105239_10004150 3300010375 Bacteria 17397
66 Ga0105239_10005160 3300010375 Bacteria 15414
67 Ga0157374_10004274 3300013296 Bacteria 12012
68 Ga0157378_10113585 3300013297 Bacteria 2487
69 Ga0157375_10064764 3300013308 Bacteria 3640
70 Ga0163163_10013644 3300014325 Bacteria 7441
71 Ga0157380_10013062 3300014326 Bacteria 6042
72 Ga0157379_10054220 3300014968 Bacteria 3582
73 Ga0163161_10035988 3300017792 Bacteria 3544
74 Ga0163161_10170197 3300017792 Bacteria 1665
75 Ga0209051_1000014 3300025303 Bacteria 552732
76 Ga0209051_1000404 3300025303 Bacteria 59919
77 Ga0209051_1014655 3300025303 Bacteria 3646
78 Ga0207656_10033303 3300025321 Bacteria 2145
79 Ga0207710_10000028 3300025900 Bacteria 304525
80 Ga0207688_10000065 3300025901 Bacteria 38587
81 Ga0207671_10057084 3300025914 Bacteria 2893
82 Ga0207693_10047027 3300025915 Bacteria 3391
83 Ga0207681_10053164 3300025923 Bacteria 2749
84 Ga0207706_10008444 3300025933 Bacteria 9504
85 Ga0207670_10076326 3300025936 Bacteria 2331
86 Ga0207669_10009730 3300025937 Bacteria 4594
87 Ga0207704_10151768 3300025938 Bacteria 1636
88 Ga0207711_10001077 3300025941 Bacteria 26072
89 Ga0207651_10071486 3300025960 Bacteria 2460
90 Ga0207712_10000016 3300025961 Bacteria 343014
91 Ga0207712_10070068 3300025961 Bacteria 2518
92 Ga0207668_10004316 3300025972 Bacteria 8349
93 Ga0207640_10048098 3300025981 Bacteria 2755
94 Ga0207658_10000866 3300025986 Bacteria 25261
95 Ga0207658_10002012 3300025986 Bacteria 15163
96 Ga0207658_10024547 3300025986 Bacteria 4219
97 Ga0207703_10201826 3300026035 Bacteria 1767
98 Ga0207678_10028863 3300026067 Bacteria 4844
99 Ga0207708_10029278 3300026075 Bacteria 4173
100 Ga0207641_10003491 3300026088 Bacteria 13924
101 Ga0207648_10038169 3300026089 Bacteria 4227
102 Ga0207675_100027067 3300026118 Bacteria 5339
103 Ga0207675_100091492 3300026118 Bacteria 2860
104 Ga0207675_100117985 3300026118 Bacteria 2509
105 Ga0207683_10088924 3300026121 Bacteria 2749
106 Ga0207683_10094024 3300026121 Bacteria 2671
107 Ga0268266_10011602 3300028379 Bacteria 7649
108 Ga0268266_10016620 3300028379 Bacteria 6287
109 Ga0268266_10091572 3300028379 Bacteria 2666
110 Ga0268265_10000056 3300028380 Bacteria 155720
111 Ga0268264_10000053 3300028381 Bacteria 320368
112 Ga0265327_10000230 3300031251 Bacteria 113245
113 Ga0373931_0063673 3300035691 Bacteria 1994
114 Ga0436364_0732626 3300037853 Bacteria 21938
115 Ga0436365_0054428 3300039437 Bacteria 3548
116 Ga0451789_1074509 3300041443 Bacteria 3780
117 Ga0451791_0449040 3300041451 Bacteria 4010
118 Ga0451793_0711440 3300041452 Bacteria 5186
119 Ga0451797_0220494 3300041453 Bacteria 3025
120 Ga0451802_1624683 3300041460 Bacteria 1961
121 Ga0451843_0165170 3300041509 Bacteria 3267
122 Ga0495603_0080717 3300046455 Bacteria 1906
123 Ga0495629_0129945 3300046459 Bacteria 1754
124 Ga0495638_0002466 3300046460 Bacteria 15063
125 Ga0495638_0004063 3300046460 Bacteria 11219
126 Ga0495638_0013711 3300046460 Bacteria 5507
127 Ga0495648_0007483 3300046524 Bacteria 8734
128 Ga0495665_0030010 3300046531 Bacteria 2910
129 Ga0495611_0030164 3300046648 Bacteria 2383
130 Ga0495581_0027998 3300047315 Bacteria 3267
131 Ga0495672_0003555 3300047320 Bacteria 13266
132 Ga0495672_0032312 3300047320 Bacteria 3258
133 Ga0495673_0001012 3300047469 Bacteria 24787
134 Ga0495686_0003874 3300047472 Bacteria 12630
135 Ga0495686_0009660 3300047472 Bacteria 6929
136 Ga0496100_0000515 3300048903 Bacteria 18565
137 Ga0496100_0002188 3300048903 Bacteria 9863
138 Ga0496101_0000034 3300048904 Bacteria 178045
139 Ga0496101_0000247 3300048904 Bacteria 39381
140 Ga0496102_0000239 3300048905 Bacteria 72112
141 Ga0496102_0004362 3300048905 Bacteria 11952
142 Ga0496102_0004901 3300048905 Bacteria 11334
143 Ga0496102_0052699 3300048905 Bacteria 3708
144 Ga0496103_0000148 3300048906 Bacteria 72710
145 Ga0496103_0000645 3300048906 Bacteria 26346
146 Ga0496103_0001258 3300048906 Bacteria 17302
147 Ga0496104_0086052 3300048907 Bacteria 3001
148 Ga0496106_0001985 3300048909 Bacteria 15386
149 Ga0496106_0168981 3300048909 Bacteria 1732
150 Ga0496107_0016139 3300048910 Bacteria 5240
151 Ga0496107_0037312 3300048910 Bacteria 3487
152 Ga0496107_0111936 3300048910 Bacteria 2007
153 Ga0496108_0000767 3300048911 Bacteria 25031
154 Ga0496109_0000204 3300048912 Bacteria 58449
155 Ga0496109_0001884 3300048912 Bacteria 17397
156 Ga0496110_0024085 3300048913 Bacteria 5187
157 Ga0496115_0044870 3300048918 Bacteria 3528
158 Ga0496116_0000355 3300048919 Bacteria 72106
159 Ga0496116_0000974 3300048919 Bacteria 35126
160 Ga0496117_0000051 3300048920 Bacteria 285716
161 Ga0496117_0005615 3300048920 Bacteria 13099
162 Ga0496118_0000043 3300048921 Bacteria 285716
163 Ga0496118_0002000 3300048921 Bacteria 28889
164 Ga0496118_0039798 3300048921 Bacteria 3745
165 Ga0496118_0043866 3300048921 Bacteria 3509
166 Ga0496119_0001485 3300048922 Bacteria 28118
167 Ga0496119_0002153 3300048922 Bacteria 22127
168 Ga0496119_0004254 3300048922 Bacteria 14348
169 Ga0496119_0004540 3300048922 Bacteria 13767
170 Ga0496120_0001079 3300048923 Bacteria 35875
171 Ga0496121_0000048 3300048924 Bacteria 330242
172 Ga0496122_0000234 3300048925 Bacteria 125042
173 Ga0496124_0000044 3300048927 Bacteria 289064
174 Ga0496124_0014280 3300048927 Bacteria 7687
175 Ga0496125_0000037 3300048928 Bacteria 330242
176 Ga0496126_0000046 3300048929 Bacteria 330242
177 Ga0496126_0001438 3300048929 Bacteria 37353
178 Ga0496126_0025678 3300048929 Bacteria 5662
179 Ga0501032_0001059 3300049569 Bacteria 21988
180 Ga0501034_0006210 3300049571 Bacteria 12863
181 Ga0501034_0023672 3300049571 Bacteria 6254
182 Ga0501036_0062525 3300049572 Bacteria 3153
183 Ga0501037_0000982 3300049573 Bacteria 21204
184 Ga0501037_0005315 3300049573 Bacteria 9364
185 Ga0501038_0135898 3300049574 Bacteria 2014
186 Ga0501039_0001055 3300049575 Bacteria 20204
187 Ga0501039_0004784 3300049575 Bacteria 10252
188 Ga0501043_0002277 3300049579 Bacteria 16316
189 Ga0501043_0006254 3300049579 Bacteria 9560
190 Ga0501070_0000212 3300049586 Bacteria 55049
191 Ga0501070_0003104 3300049586 Bacteria 14471
192 Ga0501073_0016617 3300049589 Bacteria 5332
193 Ga0501077_0114682 3300049593 Bacteria 1708
194 Ga0501044_0009319 3300049823 Bacteria 10710
195 Ga0501044_0036890 3300049823 Bacteria 5112
196 nmdc:mga03683_20394_c1 3300050489 Bacteria 2542
197 nmdc:mga03n38_16709_c1 3300050490 Bacteria 2861
198 nmdc:mga00v17_7408_c1 3300050491 Bacteria 5854
199 nmdc:mga0yw44_5215_c1 3300050492 Bacteria 6096
200 nmdc:mga07m45_46073_c1 3300050496 Bacteria 2449
201 Ga0500635_0000876 3300053080 Bacteria 7332
202 Ga0500635_0001178 3300053080 Bacteria 6260
203 Ga0500643_002071 3300053087 Bacteria 10675
204 Ga0500643_005177 3300053087 Bacteria 5689
205 Ga0500643_019387 3300053087 Bacteria 2239
206 Ga0500556_0013761 3300053104 Bacteria 2456
207 Ga0500652_000418 3300053131 Bacteria 15202
208 Ga0500652_000914 3300053131 Bacteria 9744
209 Ga0500652_001286 3300053131 Bacteria 7952
210 Ga0500658_0030078 3300053134 Bacteria 2116
211 Ga0500616_0000088 3300053153 Bacteria 191662
212 Ga0500616_0017110 3300053153 Bacteria 4117
213 Ga0500627_0035784 3300053158 Bacteria 2111
214 Ga0500645_000006 3300053730 Bacteria 276677
215 Ga0500645_000029 3300053730 Bacteria 122362
216 Ga0500645_007152 3300053730 Bacteria 3917
217 2939585338 2939582691 Bacteria 7088898
218 2644489488 2643221687 Bacteria 6500351
219 2738664634 2738541264 Bacteria 5935393
220 2738702845 2738541274 Bacteria 6909446
221 2738704177 2738541274 Bacteria 6909446
222 2739143769 2738541356 Bacteria 5935017
223 2739329754 2738543028 Bacteria 6917070
224 2739331340 2738543028 Bacteria 6917070
225 2739363563 2738543034 Bacteria 6084756
226 2753037067 2751185725 Bacteria 5740550
227 2753324936 2751185792 Bacteria 5739090
228 2902793582 2902792274 Bacteria 7270173
229 2902803012 2902799365 Bacteria 5419524
230 2902804607 2902799365 Bacteria 5419524
231 2902840933 2902837492 Bacteria 6697721
232 2929214052 2929212328 Bacteria 7708288
233 JGI24746J21847_1001628
234 JGI24744J21845_10006347
235 Ga0055540_1000038
236 Ga0055540_1001445
237 Ga0055540_1004522
238 Ga0068869_100014862
239 Ga0070666_10011571
240 Ga0070682_100037756
241 Ga0070682_100134947
242 Ga0068868_100076371
243 Ga0070689_100169346
244 Ga0070668_100092846
245 Ga0070669_100046799
246 Ga0070673_100093625
247 Ga0070667_100000477
248 Ga0070667_100006197
249 Ga0070667_100034968
250 Ga0070710_10051699
251 Ga0070700_100023945
252 Ga0070663_100086581
253 Ga0070678_100024962
254 Ga0070662_100056949
255 Ga0070685_10020274
256 Ga0068853_100103385
257 Ga0068853_100230654
258 Ga0070672_100172759
259 Ga0070665_100007780
260 Ga0070665_100008645
261 Ga0070665_100068535
262 Ga0070704_100087288
263 Ga0070704_100100352
264 Ga0068859_100001411
265 Ga0068861_100041077
266 Ga0068861_100043448
267 Ga0068863_100003552
268 Ga0068858_100023659
269 Ga0068858_100142212
270 Ga0068860_100000025
271 Ga0068862_100000045
272 Ga0081455_10012108
273 Ga0075365_10020490
274 Ga0075365_10044022
275 Ga0075363_100002170
276 Ga0075363_100012538
277 Ga0075363_100080192
278 Ga0075364_10013732
279 Ga0075364_10018440
280 Ga0075367_10014659
281 Ga0075370_10006186
282 Ga0075370_10027454
283 Ga0075370_10034092
284 Ga0068865_100116848
285 Ga0097620_100001411
286 Ga0111539_10130206
287 Ga0105245_10176274
288 Ga0105247_10000010
289 Ga0105243_10132357
290 Ga0105248_10000100
291 Ga0105237_10001483
292 Ga0105237_10012679
293 Ga0105237_10102403
294 Ga0105249_10000010
295 Ga0105249_10146803
296 Ga0099796_10008847
297 Ga0105239_10004150
298 Ga0105239_10005160
299 Ga0157374_10004274
300 Ga0157378_10113585
301 Ga0157375_10064764
302 Ga0163163_10013644
303 Ga0157380_10013062
304 Ga0157379_10054220
305 Ga0163161_10035988
306 Ga0163161_10170197
307 Ga0209051_1000014
308 Ga0209051_1000404
309 Ga0209051_1014655
310 Ga0207656_10033303
311 Ga0207710_10000028
312 Ga0207688_10000065
313 Ga0207671_10057084
314 Ga0207693_10047027
315 Ga0207681_10053164
316 Ga0207706_10008444
317 Ga0207670_10076326
318 Ga0207669_10009730
319 Ga0207704_10151768
320 Ga0207711_10001077
321 Ga0207651_10071486
322 Ga0207712_10000016
323 Ga0207712_10070068
324 Ga0207668_10004316
325 Ga0207640_10048098
326 Ga0207658_10000866
327 Ga0207658_10002012
328 Ga0207658_10024547
329 Ga0207703_10201826
330 Ga0207678_10028863
331 Ga0207708_10029278
332 Ga0207641_10003491
333 Ga0207648_10038169
334 Ga0207675_100027067
335 Ga0207675_100091492
336 Ga0207675_100117985
337 Ga0207683_10088924
338 Ga0207683_10094024
339 Ga0268266_10011602
340 Ga0268266_10016620
341 Ga0268266_10091572
342 Ga0268265_10000056
343 Ga0268264_10000053
344 Ga0265327_10000230
345 Ga0373931_0063673
346 Ga0436364_0732626
347 Ga0436365_0054428
348 Ga0451789_1074509
349 Ga0451791_0449040
350 Ga0451793_0711440
351 Ga0451797_0220494
352 Ga0451802_1624683
353 Ga0451843_0165170
354 Ga0495603_0080717
355 Ga0495629_0129945
356 Ga0495638_0002466
357 Ga0495638_0004063
358 Ga0495638_0013711
359 Ga0495648_0007483
360 Ga0495665_0030010
361 Ga0495611_0030164
362 Ga0495581_0027998
363 Ga0495672_0003555
364 Ga0495672_0032312
365 Ga0495673_0001012
366 Ga0495686_0003874
367 Ga0495686_0009660
368 Ga0496100_0000515
369 Ga0496100_0002188
370 Ga0496101_0000034
371 Ga0496101_0000247
372 Ga0496102_0000239
373 Ga0496102_0004362
374 Ga0496102_0004901
375 Ga0496102_0052699
376 Ga0496103_0000148
377 Ga0496103_0000645
378 Ga0496103_0001258
379 Ga0496104_0086052
380 Ga0496106_0001985
381 Ga0496106_0168981
382 Ga0496107_0016139
383 Ga0496107_0037312
384 Ga0496107_0111936
385 Ga0496108_0000767
386 Ga0496109_0000204
387 Ga0496109_0001884
388 Ga0496110_0024085
389 Ga0496115_0044870
390 Ga0496116_0000355
391 Ga0496116_0000974
392 Ga0496117_0000051
393 Ga0496117_0005615
394 Ga0496118_0000043
395 Ga0496118_0002000
396 Ga0496118_0039798
397 Ga0496118_0043866
398 Ga0496119_0001485
399 Ga0496119_0002153
400 Ga0496119_0004254
401 Ga0496119_0004540
402 Ga0496120_0001079
403 Ga0496121_0000048
404 Ga0496122_0000234
405 Ga0496124_0000044
406 Ga0496124_0014280
407 Ga0496125_0000037
408 Ga0496126_0000046
409 Ga0496126_0001438
410 Ga0496126_0025678
411 Ga0501032_0001059
412 Ga0501034_0006210
413 Ga0501034_0023672
414 Ga0501036_0062525
415 Ga0501037_0000982
416 Ga0501037_0005315
417 Ga0501038_0135898
418 Ga0501039_0001055
419 Ga0501039_0004784
420 Ga0501043_0002277
421 Ga0501043_0006254
422 Ga0501070_0000212
423 Ga0501070_0003104
424 Ga0501073_0016617
425 Ga0501077_0114682
426 Ga0501044_0009319
427 Ga0501044_0036890
428 nmdc:mga03683_20394_c1
429 nmdc:mga03n38_16709_c1
430 nmdc:mga00v17_7408_c1
431 nmdc:mga0yw44_5215_c1
432 nmdc:mga07m45_46073_c1
433 Ga0500635_0000876
434 Ga0500635_0001178
435 Ga0500643_002071
436 Ga0500643_005177
437 Ga0500643_019387
438 Ga0500556_0013761
439 Ga0500652_000418
440 Ga0500652_000914
441 Ga0500652_001286
442 Ga0500658_0030078
443 Ga0500616_0000088
444 Ga0500616_0017110
445 Ga0500627_0035784
446 Ga0500645_000006
447 Ga0500645_000029
448 Ga0500645_007152
449 2939585338
450 2644489488
451 2738664634
452 2738702845
453 2738704177
454 2739143769
455 2739329754
456 2739331340
457 2739363563
458 2753037067
459 2753324936
460 2902793582
461 2902803012
462 2902804607
463 2902840933
464 2929214052

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13520

AA_permease_2

Amino acid permease

45

468

0.87

PF00324

AA_permease

Amino acid permease

49

488

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
3gi8-assembly1.cif.gz_C crystal structure of apct k158a transporter bound to 7f11 monoclonal fab fragment 0.868 46 388
7sfl-assembly1.cif.gz_A human nkcc1 state fu-ii 0.7847 49 388
8a6l-assembly1.cif.gz_B human 4f2hc-lat2 heterodimeric amino acid transporter in complex with anticalin d11vs 0.7845 50 389
7ccs-assembly1.cif.gz_B consensus mutated xct-cd98hc complex 0.7816 49 388
6li9-assembly1.cif.gz_B heteromeric amino acid transporter b0,+at-rbat complex bound with arginine 0.7673 47 386
ID Description Score Start End Superfamily
af_P9WQM3_13_431_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8786 42 389 1.20.1740.10
af_A0A1D6MG65_83_517_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8436 44 388 1.20.1740.10
af_O17167_24_467_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8361 45 388 1.20.1740.10
af_O05896_24_492_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8322 41 388 1.20.1740.10
af_Q9Y1A7_38_480_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8315 44 388 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A1G0FDI8-F1-model_v4 Arginine/agmatine antiporter 0.9078 41 388 GO:0005886
GO:0022857
AF-A0A4R6DLC9-F1-model_v4 Putrescine:ornithine antiporter 0.8969 44 390 GO:0005886
GO:0022857
AF-A0A497IE33-F1-model_v4 Amino acid transporter 0.8903 45 390 GO:0005886
GO:0022857
AF-A0A288QZB6-F1-model_v4 Amino acid/polyamine/organocation transporter (APC superfamily) 0.8747 46 390 GO:0005886
GO:0022857
AF-A0A2E0WE88-F1-model_v4 Amino acid permease 0.8579 48 388 GO:0005886
GO:0022857

Map