F345617
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 232 | 191 | 464 | 478 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2675902999|2676201115 |
| Length | 504 |
| Sequence | TTATTTSAATSAATTGTPVAPGASGLAAGLARVRPRPTRVGLVAGGLGAYWPQFPALLPKLQQSAREVSARLSALDCEVVDVGFISDAQEGARAADRLRAADCDLIVGFLTTYMTASMLVPIAQRAGAPVLLLNLQPTEAMDHGTFDTGDWLAYCGACPLPEMANAFRRCGVEFRSVSGYLADERAWRRIERWVRAAGVRAALRTGRHGLLGHLYPGMMDVATDPTLVSAQLGGHVEILEIDDLRVRVEKVTDAETDARLALAGEVFTLDQSVVDEDLRWGARVSVALDRLVDDFALDSLAYYHRGLDGEQHERVGAGLILGASLLTARGIPACGEYELRASLAMLMFDRLGAGGSFTEIQALNFRDGVVEMGHDGPAHLAISARRPLLRGLGTYHGKRGWGVSVEFDVAHGPVTAFGLGQLRDGTFQFIAAEGTVVDGPLLRIGNTTSRVDFGRDPGEWVDAWSATGVDHHWALGTGHRAADLAAVADLLGIELVVVGPGGGA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 2 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 3 | 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 13 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 18 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 19 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 20 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 22 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 23 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 24 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 25 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 26 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 27 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 28 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 30 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 31 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 32 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 33 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009993 | Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG | Metagenome | Rhizosphere |
| 40 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 46 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 47 | 3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025735 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 72 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 73 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 74 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 75 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 76 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 77 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 78 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 79 | 3300031838 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM | Metagenome | Unclassified |
| 80 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 81 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 82 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 83 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 84 | 3300036459 | Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) | Metatranscriptome | Unclassified |
| 85 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 86 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 87 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 88 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 89 | 3300041411 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 | Metagenome | Rhizosphere |
| 90 | 3300041999 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 | Metagenome | Rhizosphere |
| 91 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 92 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 93 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 94 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 95 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 96 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 97 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 98 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 99 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 100 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 101 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300047445 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 130 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 131 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 132 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 133 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 134 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 135 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 136 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 137 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 138 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 139 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 140 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 141 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 142 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 143 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 144 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 145 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 146 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 147 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 148 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 149 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 150 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 151 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 152 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 153 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 154 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 155 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 156 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 157 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 158 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 159 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 160 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 161 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 162 | 3300053146 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere | Metagenome | Endosphere |
| 163 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 164 | 2675902999 | Frankia asymbiotica NRRL B-16386 | Isolate | Nodule |
| 165 | 2508501039 | Frankia saprophytica CN3 | Isolate | Nodule |
| 166 | 2558860112 | Pseudonocardia acaciae DSM 45401 | Isolate | Unclassified |
| 167 | 2616644941 | Streptomyces atratus OK807 | Isolate | Rhizosphere |
| 168 | 2622736626 | Micromonospora rhizosphaerae DSM 45431 | Isolate | Rhizosphere |
| 169 | 2643221548 | Streptomyces sp. Root55 | Isolate | Unclassified |
| 170 | 2675903060 | Nonomuraea wenchangensis CGMCC 4.5598 | Isolate | Rhizosphere |
| 171 | 2687453737 | Frankia sp. BMG5.36 | Isolate | Nodule |
| 172 | 2773857921 | Frankia asymbiotica NRRL B-16386 | Isolate | Nodule |
| 173 | 2791354901 | Actinophytocola xanthii 11-183 | Isolate | Rhizosphere |
| 174 | 2808606370 | Arthrobacter sp. SLBN-100 | Isolate | Unclassified |
| 175 | 2816332139 | Pseudonocardia kunmingensis DSM 45301 | Isolate | Unclassified |
| 176 | 2857733635 | Salinibacterium sp. R-73062 | Isolate | Unclassified |
| 177 | 2891326441 | Actinokineospora pegani TRM65233 | Isolate | Unclassified |
| 178 | 2895427314 | Nonomuraea sp. PA05 | Isolate | Unclassified |
| 179 | 2945920336 | Pseudarthrobacter siccitolerans W1I3 | Isolate | Rhizosphere |
| 180 | 2946037020 | Arthrobacter sp. W4I7 | Isolate | Rhizosphere |
| 181 | 2946080515 | Microbacterium sp. W4I20 | Isolate | Rhizosphere |
| 182 | 2996221748 | Micromonospora veneta CAP181 | Isolate | Unclassified |
| 183 | 3002998708 | Actinomadura barringtoniae GKU 128 | Isolate | Unclassified |
| 184 | 8001781756 | Catellatospora tritici NEAU-YM18 | Isolate | Rhizosphere |
| 185 | 8002775197 | Frankia nepalensis CN7 | Isolate | Nodule |
| 186 | 8002784119 | Frankia sp. AgB1.9 | Isolate | Nodule |
| 187 | 8003314358 | Amycolatopsis sp. MtRt-6 | Isolate | Unclassified |
| 188 | 8047710418 | Umezawaea endophytica DSM 103496 | Isolate | Unclassified |
| 189 | 8055066027 | Sphaerisporangium corydalis NEAU-YHS15 | Isolate | Unclassified |
| 190 | 8055172936 | Sphaerisporangium perillae NEAU-ZS1 | Isolate | Unclassified |
| 191 | 8057345674 | Herbiconiux aconitum CPCC 205763 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 87.07 |
| Metatranscriptomes | 0.86 |
| Isolates | 12.07 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 3.45 |
| Nodule | 2.59 |
| Rhizoplane | 9.48 |
| Rhizosphere | 71.98 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25154J39366_1000895 | 3300002738 | Bacteria | 12709 |
| 2 | rootH2_10097964 | 3300003320 | Bacteria | 5115 |
| 3 | Ga0070677_10003285 | 3300005333 | Bacteria | 5206 |
| 4 | Ga0070666_10011226 | 3300005335 | Bacteria | 5617 |
| 5 | Ga0070668_100000177 | 3300005347 | Bacteria | 41076 |
| 6 | Ga0070668_100125744 | 3300005347 | Bacteria | 2053 |
| 7 | Ga0070669_100013873 | 3300005353 | Bacteria | 5729 |
| 8 | Ga0070675_100013987 | 3300005354 | Bacteria | 6318 |
| 9 | Ga0070671_100005513 | 3300005355 | Bacteria | 10087 |
| 10 | Ga0070674_100005728 | 3300005356 | Bacteria | 7207 |
| 11 | Ga0070673_100006471 | 3300005364 | Bacteria | 7616 |
| 12 | Ga0070667_100003580 | 3300005367 | Bacteria | 13221 |
| 13 | Ga0070709_10004478 | 3300005434 | Bacteria | 7539 |
| 14 | Ga0070714_100010442 | 3300005435 | Bacteria | 7340 |
| 15 | Ga0070713_100132232 | 3300005436 | Bacteria | 2201 |
| 16 | Ga0070663_100003149 | 3300005455 | Bacteria | 9460 |
| 17 | Ga0070678_100118177 | 3300005456 | Bacteria | 2086 |
| 18 | Ga0070681_10024345 | 3300005458 | Bacteria | 6095 |
| 19 | Ga0070698_100168874 | 3300005471 | Bacteria | 2129 |
| 20 | Ga0070684_100020636 | 3300005535 | Bacteria | 5465 |
| 21 | Ga0070665_100123172 | 3300005548 | Bacteria | 2595 |
| 22 | Ga0068855_100026009 | 3300005563 | Bacteria | 7000 |
| 23 | Ga0068855_100222756 | 3300005563 | Bacteria | 2114 |
| 24 | Ga0068857_100077982 | 3300005577 | Bacteria | 2957 |
| 25 | Ga0068857_100155597 | 3300005577 | Bacteria | 2073 |
| 26 | Ga0068856_100132752 | 3300005614 | Bacteria | 2495 |
| 27 | Ga0068864_100128030 | 3300005618 | Bacteria | 2277 |
| 28 | Ga0068863_100021544 | 3300005841 | Bacteria | 6149 |
| 29 | Ga0081455_10000420 | 3300005937 | Bacteria | 55691 |
| 30 | Ga0081455_10020716 | 3300005937 | Bacteria | 6184 |
| 31 | Ga0081540_1040322 | 3300005983 | Bacteria | 2435 |
| 32 | Ga0070717_10065563 | 3300006028 | Bacteria | 3019 |
| 33 | Ga0070717_10139839 | 3300006028 | Bacteria | 2087 |
| 34 | Ga0075365_10021662 | 3300006038 | Bacteria | 4013 |
| 35 | Ga0070716_100003177 | 3300006173 | Bacteria | 7697 |
| 36 | Ga0070712_100011720 | 3300006175 | Bacteria | 5569 |
| 37 | Ga0075369_10063023 | 3300006186 | Bacteria | 1621 |
| 38 | Ga0105251_10010063 | 3300009011 | Bacteria | 5524 |
| 39 | Ga0105244_10028045 | 3300009036 | Bacteria | 3025 |
| 40 | Ga0105240_10034320 | 3300009093 | Bacteria | 6545 |
| 41 | Ga0105243_10106262 | 3300009148 | Bacteria | 2340 |
| 42 | Ga0105248_10014127 | 3300009177 | Bacteria | 8789 |
| 43 | Ga0105237_10075952 | 3300009545 | Bacteria | 3350 |
| 44 | Ga0105028_100677 | 3300009993 | Bacteria | 3612 |
| 45 | Ga0105239_10314244 | 3300010375 | Bacteria | 1766 |
| 46 | Ga0105246_10006035 | 3300011119 | Bacteria | 7394 |
| 47 | Ga0163162_10107333 | 3300013306 | Bacteria | 2887 |
| 48 | Ga0157372_10435820 | 3300013307 | Bacteria | 1528 |
| 49 | Ga0163163_10005949 | 3300014325 | Bacteria | 10613 |
| 50 | Ga0206356_11798221 | 3300020070 | Bacteria | 2877 |
| 51 | Ga0209646_1000128 | 3300025246 | Bacteria | 130930 |
| 52 | Ga0207697_10000829 | 3300025315 | Bacteria | 17515 |
| 53 | Ga0207655_1026896 | 3300025728 | Bacteria | 2753 |
| 54 | Ga0207713_1015346 | 3300025735 | Bacteria | 3938 |
| 55 | Ga0207647_10028586 | 3300025904 | Bacteria | 3619 |
| 56 | Ga0207647_10042041 | 3300025904 | Bacteria | 2870 |
| 57 | Ga0207647_10043009 | 3300025904 | Bacteria | 2829 |
| 58 | Ga0207699_10002323 | 3300025906 | Bacteria | 8990 |
| 59 | Ga0207645_10002744 | 3300025907 | Bacteria | 13712 |
| 60 | Ga0207671_10024819 | 3300025914 | Bacteria | 4504 |
| 61 | Ga0207693_10012473 | 3300025915 | Bacteria | 6865 |
| 62 | Ga0207650_10018172 | 3300025925 | Bacteria | 4931 |
| 63 | Ga0207659_10086090 | 3300025926 | Bacteria | 2336 |
| 64 | Ga0207700_10046617 | 3300025928 | Bacteria | 3207 |
| 65 | Ga0207664_10007843 | 3300025929 | Bacteria | 7417 |
| 66 | Ga0207664_10092871 | 3300025929 | Bacteria | 2478 |
| 67 | Ga0207644_10036071 | 3300025931 | Bacteria | 3469 |
| 68 | Ga0207665_10006649 | 3300025939 | Bacteria | 7670 |
| 69 | Ga0207691_10002054 | 3300025940 | Bacteria | 19680 |
| 70 | Ga0207711_10018525 | 3300025941 | Bacteria | 5789 |
| 71 | Ga0207661_10075132 | 3300025944 | Bacteria | 2772 |
| 72 | Ga0207668_10000751 | 3300025972 | Bacteria | 19827 |
| 73 | Ga0207668_10033875 | 3300025972 | Bacteria | 3386 |
| 74 | Ga0207678_10004026 | 3300026067 | Bacteria | 13222 |
| 75 | Ga0207702_10015874 | 3300026078 | Bacteria | 6235 |
| 76 | Ga0207702_10117037 | 3300026078 | Bacteria | 2379 |
| 77 | Ga0207641_10034716 | 3300026088 | Bacteria | 4197 |
| 78 | Ga0207676_10118982 | 3300026095 | Bacteria | 2224 |
| 79 | Ga0207674_10128807 | 3300026116 | Bacteria | 2495 |
| 80 | Ga0207674_10150572 | 3300026116 | Bacteria | 2284 |
| 81 | Ga0207683_10004369 | 3300026121 | Bacteria | 12210 |
| 82 | Ga0265319_1000052 | 3300028563 | Bacteria | 95426 |
| 83 | Ga0307517_10154395 | 3300028786 | Bacteria | 1563 |
| 84 | Ga0307515_10071162 | 3300028794 | Bacteria | 4718 |
| 85 | Ga0307512_10058886 | 3300030522 | Bacteria | 2987 |
| 86 | Ga0265325_10015149 | 3300031241 | Bacteria | 4342 |
| 87 | Ga0265340_10002054 | 3300031247 | Bacteria | 11532 |
| 88 | Ga0307513_10055040 | 3300031456 | Bacteria | 4260 |
| 89 | Ga0307509_10033663 | 3300031507 | Bacteria | 5639 |
| 90 | Ga0307509_10161419 | 3300031507 | Bacteria | 2138 |
| 91 | Ga0307518_10071043 | 3300031838 | Bacteria | 2521 |
| 92 | Ga0307409_100185114 | 3300031995 | Bacteria | 1848 |
| 93 | Ga0307416_100029543 | 3300032002 | Bacteria | 4097 |
| 94 | Ga0307507_10000329 | 3300033179 | Bacteria | 96032 |
| 95 | Ga0307507_10074083 | 3300033179 | Bacteria | 3056 |
| 96 | Ga0307510_10005998 | 3300033180 | Bacteria | 14493 |
| 97 | Ga0372808_000918 | 3300036459 | Bacteria | 2759 |
| 98 | Ga0373925_0000043 | 3300037068 | Bacteria | 134268 |
| 99 | Ga0395900_0013034 | 3300037418 | Bacteria | 8496 |
| 100 | Ga0395898_0003208 | 3300037466 | Bacteria | 18407 |
| 101 | Ga0395898_0014610 | 3300037466 | Bacteria | 8064 |
| 102 | Ga0436364_0002006 | 3300037853 | Bacteria | 3371 |
| 103 | Ga0439466_0029016 | 3300041411 | Bacteria | 1906 |
| 104 | Ga0439433_0000489 | 3300041999 | Bacteria | 7352 |
| 105 | Ga0466969_0060321 | 3300044656 | Bacteria | 1844 |
| 106 | Ga0466972_0031744 | 3300044658 | Bacteria | 2596 |
| 107 | Ga0466965_0000760 | 3300044683 | Bacteria | 12127 |
| 108 | Ga0466966_0021789 | 3300044684 | Bacteria | 4207 |
| 109 | Ga0466961_0004014 | 3300044693 | Bacteria | 9216 |
| 110 | Ga0466963_0011450 | 3300044694 | Bacteria | 5403 |
| 111 | Ga0466971_0029340 | 3300044719 | Bacteria | 2460 |
| 112 | Ga0466960_0000393 | 3300044901 | Bacteria | 14907 |
| 113 | Ga0466959_0002805 | 3300045049 | Bacteria | 11222 |
| 114 | Ga0466959_0033301 | 3300045049 | Bacteria | 3811 |
| 115 | Ga0466967_0001507 | 3300045976 | Bacteria | 13601 |
| 116 | Ga0466967_0008509 | 3300045976 | Bacteria | 7530 |
| 117 | Ga0466967_0023618 | 3300045976 | Bacteria | 5043 |
| 118 | Ga0466967_0056194 | 3300045976 | Bacteria | 3470 |
| 119 | Ga0495592_0003984 | 3300046454 | Bacteria | 10710 |
| 120 | Ga0495592_0009378 | 3300046454 | Bacteria | 7360 |
| 121 | Ga0495629_0014473 | 3300046459 | Bacteria | 5675 |
| 122 | Ga0495629_0023243 | 3300046459 | Bacteria | 4418 |
| 123 | Ga0495664_0010517 | 3300046477 | Bacteria | 5193 |
| 124 | Ga0495664_0063558 | 3300046477 | Bacteria | 2200 |
| 125 | Ga0495594_0044660 | 3300046499 | Bacteria | 2431 |
| 126 | Ga0495628_0013435 | 3300046516 | Bacteria | 6889 |
| 127 | Ga0495642_0013377 | 3300046528 | Bacteria | 3172 |
| 128 | Ga0495652_0065516 | 3300046529 | Bacteria | 3052 |
| 129 | Ga0495640_0012859 | 3300046533 | Bacteria | 6386 |
| 130 | Ga0495587_0008490 | 3300046536 | Bacteria | 6601 |
| 131 | Ga0495667_0056890 | 3300046559 | Bacteria | 2571 |
| 132 | Ga0495656_0018351 | 3300046615 | Bacteria | 2684 |
| 133 | Ga0495668_0023312 | 3300046616 | Bacteria | 3533 |
| 134 | Ga0495634_0003992 | 3300046642 | Bacteria | 11709 |
| 135 | Ga0495634_0006524 | 3300046642 | Bacteria | 8854 |
| 136 | Ga0495635_0002742 | 3300046663 | Bacteria | 12075 |
| 137 | Ga0495588_0002989 | 3300046674 | Bacteria | 7308 |
| 138 | Ga0495588_0011943 | 3300046674 | Bacteria | 4091 |
| 139 | Ga0495646_0004451 | 3300046680 | Bacteria | 8828 |
| 140 | Ga0495613_0000982 | 3300046689 | Bacteria | 21695 |
| 141 | Ga0495613_0010953 | 3300046689 | Bacteria | 6731 |
| 142 | Ga0495624_0065270 | 3300046690 | Bacteria | 2274 |
| 143 | Ga0495624_0101870 | 3300046690 | Bacteria | 1768 |
| 144 | Ga0495670_0004975 | 3300046691 | Bacteria | 6530 |
| 145 | Ga0495600_0014839 | 3300046809 | Bacteria | 4914 |
| 146 | Ga0495604_0005938 | 3300047317 | Bacteria | 9686 |
| 147 | Ga0495672_0010012 | 3300047320 | Bacteria | 6795 |
| 148 | Ga0495676_0001819 | 3300047321 | Bacteria | 18687 |
| 149 | Ga0495676_0021425 | 3300047321 | Bacteria | 5644 |
| 150 | Ga0495677_0009906 | 3300047445 | Bacteria | 3508 |
| 151 | Ga0495684_0148388 | 3300047471 | Bacteria | 1755 |
| 152 | Ga0495593_0006378 | 3300047673 | Bacteria | 6918 |
| 153 | Ga0495602_0025582 | 3300048088 | Bacteria | 5711 |
| 154 | Ga0495614_0001680 | 3300048089 | Bacteria | 9659 |
| 155 | Ga0496100_0140813 | 3300048903 | Bacteria | 1709 |
| 156 | Ga0496101_0142859 | 3300048904 | Bacteria | 1825 |
| 157 | Ga0496102_0002149 | 3300048905 | Bacteria | 16917 |
| 158 | Ga0496102_0048620 | 3300048905 | Bacteria | 3856 |
| 159 | Ga0496103_0006867 | 3300048906 | Bacteria | 6798 |
| 160 | Ga0496103_0111340 | 3300048906 | Bacteria | 1739 |
| 161 | Ga0496104_0026480 | 3300048907 | Bacteria | 5355 |
| 162 | Ga0496105_0076488 | 3300048908 | Bacteria | 2764 |
| 163 | Ga0496105_0127224 | 3300048908 | Bacteria | 2100 |
| 164 | Ga0496106_0085513 | 3300048909 | Bacteria | 2428 |
| 165 | Ga0496106_0086052 | 3300048909 | Bacteria | 2420 |
| 166 | Ga0496107_0025612 | 3300048910 | Bacteria | 4176 |
| 167 | Ga0496109_0147890 | 3300048912 | Bacteria | 2198 |
| 168 | Ga0496110_0024796 | 3300048913 | Bacteria | 5117 |
| 169 | Ga0496111_0007744 | 3300048914 | Bacteria | 7067 |
| 170 | Ga0496111_0009589 | 3300048914 | Bacteria | 6468 |
| 171 | Ga0496112_0022255 | 3300048915 | Bacteria | 6038 |
| 172 | Ga0496112_0028744 | 3300048915 | Bacteria | 5370 |
| 173 | Ga0496113_0030986 | 3300048916 | Bacteria | 3877 |
| 174 | Ga0496114_0172700 | 3300048917 | Bacteria | 1884 |
| 175 | Ga0496115_0035766 | 3300048918 | Bacteria | 3931 |
| 176 | Ga0496115_0185264 | 3300048918 | Bacteria | 1720 |
| 177 | Ga0496124_0058020 | 3300048927 | Bacteria | 3258 |
| 178 | Ga0501031_0127383 | 3300049568 | Bacteria | 1663 |
| 179 | Ga0501032_0009131 | 3300049569 | Bacteria | 7195 |
| 180 | Ga0501034_0015067 | 3300049571 | Bacteria | 7949 |
| 181 | Ga0501036_0027510 | 3300049572 | Bacteria | 4804 |
| 182 | Ga0501036_0165130 | 3300049572 | Bacteria | 1866 |
| 183 | Ga0501037_0060544 | 3300049573 | Bacteria | 2761 |
| 184 | Ga0501038_0019834 | 3300049574 | Bacteria | 6052 |
| 185 | Ga0501039_0128142 | 3300049575 | Bacteria | 1991 |
| 186 | Ga0501042_0000328 | 3300049578 | Bacteria | 23727 |
| 187 | Ga0501043_0073912 | 3300049579 | Bacteria | 2677 |
| 188 | Ga0501047_0002482 | 3300049581 | Bacteria | 17611 |
| 189 | Ga0501047_0011907 | 3300049581 | Bacteria | 8232 |
| 190 | Ga0501047_0237486 | 3300049581 | Bacteria | 1674 |
| 191 | Ga0501048_0004578 | 3300049582 | Bacteria | 10523 |
| 192 | Ga0501048_0055882 | 3300049582 | Bacteria | 2802 |
| 193 | Ga0501074_0024467 | 3300049590 | Bacteria | 4389 |
| 194 | Ga0501080_0100333 | 3300049742 | Bacteria | 2686 |
| 195 | Ga0501035_0023476 | 3300049822 | Bacteria | 5657 |
| 196 | Ga0501035_0038400 | 3300049822 | Bacteria | 4335 |
| 197 | Ga0501044_0051318 | 3300049823 | Bacteria | 4253 |
| 198 | Ga0501044_0213441 | 3300049823 | Bacteria | 1883 |
| 199 | nmdc:mga0sz30_60209_c1 | 3300050516 | Bacteria | 1621 |
| 200 | Ga0500568_0001842 | 3300053139 | Bacteria | 13069 |
| 201 | Ga0500568_0004815 | 3300053139 | Bacteria | 7133 |
| 202 | Ga0500588_0000950 | 3300053146 | Bacteria | 5157 |
| 203 | Ga0500616_0000010 | 3300053153 | Bacteria | 761410 |
| 204 | Ga0500616_0000136 | 3300053153 | Bacteria | 126636 |
| 205 | 2676201115 | 2675902999 | Bacteria | 9438463 |
| 206 | 2508672749 | 2508501039 | Bacteria | 9978592 |
| 207 | 2558908626 | 2558860112 | Bacteria | 9931328 |
| 208 | 2616904327 | 2616644941 | Bacteria | 8510691 |
| 209 | 2623588215 | 2622736626 | Bacteria | 7181580 |
| 210 | 2643760752 | 2643221548 | Bacteria | 8053412 |
| 211 | 2676492720 | 2675903060 | Bacteria | 10051191 |
| 212 | 2689961399 | 2687453737 | Bacteria | 11203906 |
| 213 | 2774845691 | 2773857921 | Bacteria | 9435764 |
| 214 | 2791913272 | 2791354901 | Bacteria | 8322202 |
| 215 | 2808894636 | 2808606370 | Bacteria | 4942454 |
| 216 | 2816510935 | 2816332139 | Bacteria | 9138787 |
| 217 | 2857735273 | 2857733635 | Bacteria | 3532004 |
| 218 | 2891326798 | 2891326441 | Bacteria | 6439512 |
| 219 | 2895436923 | 2895427314 | Bacteria | 13147766 |
| 220 | 2945924160 | 2945920336 | Bacteria | 4501603 |
| 221 | 2946040075 | 2946037020 | Bacteria | 4900426 |
| 222 | 2946082253 | 2946080515 | Bacteria | 4310960 |
| 223 | 2996224547 | 2996221748 | Bacteria | 6799777 |
| 224 | 3003000342 | 3002998708 | Bacteria | 11715108 |
| 225 | 8001788804 | 8001781756 | Bacteria | 9586736 |
| 226 | 8002777525 | 8002775197 | Bacteria | 10728764 |
| 227 | 8002787770 | 8002784119 | Bacteria | 9788632 |
| 228 | 8003321472 | 8003314358 | Bacteria | 10575343 |
| 229 | 8047713193 | 8047710418 | Bacteria | 11023148 |
| 230 | 8055072580 | 8055066027 | Bacteria | 9479577 |
| 231 | 8055181615 | 8055172936 | Bacteria | 9305943 |
| 232 | 8057346725 | 8057345674 | Bacteria | 4160394 |
| 233 | JGI25154J39366_1000895 | |||
| 234 | rootH2_10097964 | |||
| 235 | Ga0070677_10003285 | |||
| 236 | Ga0070666_10011226 | |||
| 237 | Ga0070668_100000177 | |||
| 238 | Ga0070668_100125744 | |||
| 239 | Ga0070669_100013873 | |||
| 240 | Ga0070675_100013987 | |||
| 241 | Ga0070671_100005513 | |||
| 242 | Ga0070674_100005728 | |||
| 243 | Ga0070673_100006471 | |||
| 244 | Ga0070667_100003580 | |||
| 245 | Ga0070709_10004478 | |||
| 246 | Ga0070714_100010442 | |||
| 247 | Ga0070713_100132232 | |||
| 248 | Ga0070663_100003149 | |||
| 249 | Ga0070678_100118177 | |||
| 250 | Ga0070681_10024345 | |||
| 251 | Ga0070698_100168874 | |||
| 252 | Ga0070684_100020636 | |||
| 253 | Ga0070665_100123172 | |||
| 254 | Ga0068855_100026009 | |||
| 255 | Ga0068855_100222756 | |||
| 256 | Ga0068857_100077982 | |||
| 257 | Ga0068857_100155597 | |||
| 258 | Ga0068856_100132752 | |||
| 259 | Ga0068864_100128030 | |||
| 260 | Ga0068863_100021544 | |||
| 261 | Ga0081455_10000420 | |||
| 262 | Ga0081455_10020716 | |||
| 263 | Ga0081540_1040322 | |||
| 264 | Ga0070717_10065563 | |||
| 265 | Ga0070717_10139839 | |||
| 266 | Ga0075365_10021662 | |||
| 267 | Ga0070716_100003177 | |||
| 268 | Ga0070712_100011720 | |||
| 269 | Ga0075369_10063023 | |||
| 270 | Ga0105251_10010063 | |||
| 271 | Ga0105244_10028045 | |||
| 272 | Ga0105240_10034320 | |||
| 273 | Ga0105243_10106262 | |||
| 274 | Ga0105248_10014127 | |||
| 275 | Ga0105237_10075952 | |||
| 276 | Ga0105028_100677 | |||
| 277 | Ga0105239_10314244 | |||
| 278 | Ga0105246_10006035 | |||
| 279 | Ga0163162_10107333 | |||
| 280 | Ga0157372_10435820 | |||
| 281 | Ga0163163_10005949 | |||
| 282 | Ga0206356_11798221 | |||
| 283 | Ga0209646_1000128 | |||
| 284 | Ga0207697_10000829 | |||
| 285 | Ga0207655_1026896 | |||
| 286 | Ga0207713_1015346 | |||
| 287 | Ga0207647_10028586 | |||
| 288 | Ga0207647_10042041 | |||
| 289 | Ga0207647_10043009 | |||
| 290 | Ga0207699_10002323 | |||
| 291 | Ga0207645_10002744 | |||
| 292 | Ga0207671_10024819 | |||
| 293 | Ga0207693_10012473 | |||
| 294 | Ga0207650_10018172 | |||
| 295 | Ga0207659_10086090 | |||
| 296 | Ga0207700_10046617 | |||
| 297 | Ga0207664_10007843 | |||
| 298 | Ga0207664_10092871 | |||
| 299 | Ga0207644_10036071 | |||
| 300 | Ga0207665_10006649 | |||
| 301 | Ga0207691_10002054 | |||
| 302 | Ga0207711_10018525 | |||
| 303 | Ga0207661_10075132 | |||
| 304 | Ga0207668_10000751 | |||
| 305 | Ga0207668_10033875 | |||
| 306 | Ga0207678_10004026 | |||
| 307 | Ga0207702_10015874 | |||
| 308 | Ga0207702_10117037 | |||
| 309 | Ga0207641_10034716 | |||
| 310 | Ga0207676_10118982 | |||
| 311 | Ga0207674_10128807 | |||
| 312 | Ga0207674_10150572 | |||
| 313 | Ga0207683_10004369 | |||
| 314 | Ga0265319_1000052 | |||
| 315 | Ga0307517_10154395 | |||
| 316 | Ga0307515_10071162 | |||
| 317 | Ga0307512_10058886 | |||
| 318 | Ga0265325_10015149 | |||
| 319 | Ga0265340_10002054 | |||
| 320 | Ga0307513_10055040 | |||
| 321 | Ga0307509_10033663 | |||
| 322 | Ga0307509_10161419 | |||
| 323 | Ga0307518_10071043 | |||
| 324 | Ga0307409_100185114 | |||
| 325 | Ga0307416_100029543 | |||
| 326 | Ga0307507_10000329 | |||
| 327 | Ga0307507_10074083 | |||
| 328 | Ga0307510_10005998 | |||
| 329 | Ga0372808_000918 | |||
| 330 | Ga0373925_0000043 | |||
| 331 | Ga0395900_0013034 | |||
| 332 | Ga0395898_0003208 | |||
| 333 | Ga0395898_0014610 | |||
| 334 | Ga0436364_0002006 | |||
| 335 | Ga0439466_0029016 | |||
| 336 | Ga0439433_0000489 | |||
| 337 | Ga0466969_0060321 | |||
| 338 | Ga0466972_0031744 | |||
| 339 | Ga0466965_0000760 | |||
| 340 | Ga0466966_0021789 | |||
| 341 | Ga0466961_0004014 | |||
| 342 | Ga0466963_0011450 | |||
| 343 | Ga0466971_0029340 | |||
| 344 | Ga0466960_0000393 | |||
| 345 | Ga0466959_0002805 | |||
| 346 | Ga0466959_0033301 | |||
| 347 | Ga0466967_0001507 | |||
| 348 | Ga0466967_0008509 | |||
| 349 | Ga0466967_0023618 | |||
| 350 | Ga0466967_0056194 | |||
| 351 | Ga0495592_0003984 | |||
| 352 | Ga0495592_0009378 | |||
| 353 | Ga0495629_0014473 | |||
| 354 | Ga0495629_0023243 | |||
| 355 | Ga0495664_0010517 | |||
| 356 | Ga0495664_0063558 | |||
| 357 | Ga0495594_0044660 | |||
| 358 | Ga0495628_0013435 | |||
| 359 | Ga0495642_0013377 | |||
| 360 | Ga0495652_0065516 | |||
| 361 | Ga0495640_0012859 | |||
| 362 | Ga0495587_0008490 | |||
| 363 | Ga0495667_0056890 | |||
| 364 | Ga0495656_0018351 | |||
| 365 | Ga0495668_0023312 | |||
| 366 | Ga0495634_0003992 | |||
| 367 | Ga0495634_0006524 | |||
| 368 | Ga0495635_0002742 | |||
| 369 | Ga0495588_0002989 | |||
| 370 | Ga0495588_0011943 | |||
| 371 | Ga0495646_0004451 | |||
| 372 | Ga0495613_0000982 | |||
| 373 | Ga0495613_0010953 | |||
| 374 | Ga0495624_0065270 | |||
| 375 | Ga0495624_0101870 | |||
| 376 | Ga0495670_0004975 | |||
| 377 | Ga0495600_0014839 | |||
| 378 | Ga0495604_0005938 | |||
| 379 | Ga0495672_0010012 | |||
| 380 | Ga0495676_0001819 | |||
| 381 | Ga0495676_0021425 | |||
| 382 | Ga0495677_0009906 | |||
| 383 | Ga0495684_0148388 | |||
| 384 | Ga0495593_0006378 | |||
| 385 | Ga0495602_0025582 | |||
| 386 | Ga0495614_0001680 | |||
| 387 | Ga0496100_0140813 | |||
| 388 | Ga0496101_0142859 | |||
| 389 | Ga0496102_0002149 | |||
| 390 | Ga0496102_0048620 | |||
| 391 | Ga0496103_0006867 | |||
| 392 | Ga0496103_0111340 | |||
| 393 | Ga0496104_0026480 | |||
| 394 | Ga0496105_0076488 | |||
| 395 | Ga0496105_0127224 | |||
| 396 | Ga0496106_0085513 | |||
| 397 | Ga0496106_0086052 | |||
| 398 | Ga0496107_0025612 | |||
| 399 | Ga0496109_0147890 | |||
| 400 | Ga0496110_0024796 | |||
| 401 | Ga0496111_0007744 | |||
| 402 | Ga0496111_0009589 | |||
| 403 | Ga0496112_0022255 | |||
| 404 | Ga0496112_0028744 | |||
| 405 | Ga0496113_0030986 | |||
| 406 | Ga0496114_0172700 | |||
| 407 | Ga0496115_0035766 | |||
| 408 | Ga0496115_0185264 | |||
| 409 | Ga0496124_0058020 | |||
| 410 | Ga0501031_0127383 | |||
| 411 | Ga0501032_0009131 | |||
| 412 | Ga0501034_0015067 | |||
| 413 | Ga0501036_0027510 | |||
| 414 | Ga0501036_0165130 | |||
| 415 | Ga0501037_0060544 | |||
| 416 | Ga0501038_0019834 | |||
| 417 | Ga0501039_0128142 | |||
| 418 | Ga0501042_0000328 | |||
| 419 | Ga0501043_0073912 | |||
| 420 | Ga0501047_0002482 | |||
| 421 | Ga0501047_0011907 | |||
| 422 | Ga0501047_0237486 | |||
| 423 | Ga0501048_0004578 | |||
| 424 | Ga0501048_0055882 | |||
| 425 | Ga0501074_0024467 | |||
| 426 | Ga0501080_0100333 | |||
| 427 | Ga0501035_0023476 | |||
| 428 | Ga0501035_0038400 | |||
| 429 | Ga0501044_0051318 | |||
| 430 | Ga0501044_0213441 | |||
| 431 | nmdc:mga0sz30_60209_c1 | |||
| 432 | Ga0500568_0001842 | |||
| 433 | Ga0500568_0004815 | |||
| 434 | Ga0500588_0000950 | |||
| 435 | Ga0500616_0000010 | |||
| 436 | Ga0500616_0000136 | |||
| 437 | 2676201115 | |||
| 438 | 2508672749 | |||
| 439 | 2558908626 | |||
| 440 | 2616904327 | |||
| 441 | 2623588215 | |||
| 442 | 2643760752 | |||
| 443 | 2676492720 | |||
| 444 | 2689961399 | |||
| 445 | 2774845691 | |||
| 446 | 2791913272 | |||
| 447 | 2808894636 | |||
| 448 | 2816510935 | |||
| 449 | 2857735273 | |||
| 450 | 2891326798 | |||
| 451 | 2895436923 | |||
| 452 | 2945924160 | |||
| 453 | 2946040075 | |||
| 454 | 2946082253 | |||
| 455 | 2996224547 | |||
| 456 | 3003000342 | |||
| 457 | 8001788804 | |||
| 458 | 8002777525 | |||
| 459 | 8002787770 | |||
| 460 | 8003321472 | |||
| 461 | 8047713193 | |||
| 462 | 8055072580 | |||
| 463 | 8055181615 | |||
| 464 | 8057346725 |
Family Sequences
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4f2d-assembly1.cif.gz_A | crystal structure of escherichia coli l-arabinose isomerase (ecai) complexed with ribitol | 0.8989 | 18 | 480 |
| 2ajt-assembly1.cif.gz_A | crystal structure of l-arabinose isomerase from e.coli | 0.8979 | 18 | 480 |
| 7chl-assembly1.cif.gz_D | crystal structure of hybrid arabinose isomerase ai-10 | 0.8922 | 19 | 480 |
| 7cyy-assembly1.cif.gz_A | crystal structure of arabinose isomerase from hybrid ai8 with adonitol | 0.8903 | 16 | 480 |
| 7cwv-assembly1.cif.gz_A | crystal structure of arabinose isomerase from hyper thermophilic bacterium thermotoga maritima (tmai) wt | 0.8861 | 20 | 480 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4f2dC01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.8289 | 18 | 187 | 3.40.50.10940 |
| 4f2dC01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.8114 | 18 | 187 | 3.40.50.10940 |
| 4lqlD01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.8034 | 18 | 179 | 3.40.50.10940 |
| 4lqlD01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.7463 | 18 | 179 | 3.40.50.10940 |
| 1fuiF03 | Alpha Beta;Alpha-Beta Barrel;L-fucose Isomerase; Chain A, domain 3;L-fucose/L-arabinose isomerase, C-terminal | 0.7284 | 323 | 479 | 3.20.14.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6G3V1Y8-F1-model_v4 | deleted | 0.9861 | 25 | 116 |
|
| AF-A0A7K1DWX7-F1-model_v4 | Arabinose isomerase | 0.9711 | 241 | 480 |
GO:0005829
GO:0008733 GO:0019569 GO:0046872 |
| AF-A0A6B2VLQ8-F1-model_v4 | Arabinose isomerase | 0.9701 | 18 | 480 |
GO:0005829
GO:0008733 GO:0019569 GO:0046872 |
| AF-A0A7W7I5B5-F1-model_v4 | L-arabinose isomerase (EC 5.3.1.4) | 0.9695 | 9 | 480 |
GO:0005829
GO:0008733 GO:0019569 GO:0046872 |
| AF-A0A6C0QDA9-F1-model_v4 | L-arabinose isomerase | 0.9692 | 14 | 479 |
GO:0005829
GO:0008733 GO:0019569 GO:0046872 |