F345088

General Info

Members Datasets Scaffolds Average Seq Length
232 156 464 251

Family's Representative Sequence

Representative Sequence 3300021377|Ga0213874_10047629|Ga0213874_100476292
Length 274
Sequence MADKGTLPRSTKADLEARAEIGAARPSREARSLLIPAVFTFVGIALLCGLGIWQLERKTWKEGLIAAIETRVGASPVTFPPESAWDALSPDKDEYRHVRVTGRFLNDKQAHLQANLVSSGADDGALGYDILTPLEMANGALVIVNRGFVPLDKKDASSRRDSEVEGETSITGLIRFPQAHPWFAPPDDPAKNVWFSRDPRPIANSFGLKRVAPVIVDADPAADKGVLPRGGQTRISLPNDHLQYALTWFGLALVLACVFIAHAMRRIREAQGLG

Samples

Sample ID Description Type Environment
1 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
37 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
38 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
52 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
58 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
59 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
60 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
61 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
62 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
63 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
84 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
86 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
87 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
88 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
89 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
90 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
91 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
92 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
93 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
94 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
95 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
96 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
97 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
98 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
99 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
100 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
101 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
102 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
103 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
118 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
119 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
120 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
121 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
122 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
123 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
124 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
125 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
126 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
127 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
128 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
129 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
130 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
133 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
134 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
135 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
136 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
137 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
138 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
139 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
140 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
141 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
142 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
143 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
144 2643221618 Ensifer sp. Root231 Isolate Unclassified
145 2643221626 Ensifer sp. Root31 Isolate Unclassified
146 2643221655 Ensifer sp. Root1252 Isolate Unclassified
147 2643221659 Ensifer sp. Root127 Isolate Unclassified
148 2643221698 Ensifer sp. Root142 Isolate Unclassified
149 2643221712 Ensifer sp. Root258 Isolate Unclassified
150 2643221734 Bosea sp. Root670 Isolate Unclassified
151 2844163670 Ensifer sp. 1H6 Isolate Unclassified
152 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
153 2909042592 Labrys sp. LIt4 Isolate Nodule
154 2917554339 Chthonobacter rhizosphaerae yh7-1 Isolate Rhizosphere
155 2941499720 Ensifer sp. 4252 Isolate Rhizosphere
156 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.4
Metatranscriptomes 0
Isolates 5.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.6
Nodule 0.43
Rhizoplane 3.02
Rhizosphere 79.31
Stem 0
Stem Tuber 0
Unclassified 1.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0213874_10047629 3300021377 Bacteria 1305
2 JGI24740J21852_10005815 3300001979 Bacteria 5178
3 JGI25151J46595_10000578 3300003187 Bacteria 32673
4 JGI25160J50197_1007394 3300003354 Bacteria 4304
5 Ga0070690_100101060 3300005330 Bacteria 1912
6 Ga0070680_100037642 3300005336 Bacteria 3909
7 Ga0070691_10058780 3300005341 Bacteria 1846
8 Ga0070703_10000628 3300005406 Bacteria 12450
9 Ga0070709_10025033 3300005434 Bacteria 3521
10 Ga0070714_100048256 3300005435 Bacteria 3621
11 Ga0070714_100451278 3300005435 Bacteria 1221
12 Ga0070701_10035972 3300005438 Bacteria 2492
13 Ga0070705_100000057 3300005440 Bacteria 58275
14 Ga0070700_100015441 3300005441 Bacteria 4330
15 Ga0070694_100010689 3300005444 Bacteria 5672
16 Ga0070694_100392885 3300005444 Bacteria 1084
17 Ga0070708_100025692 3300005445 Bacteria 5037
18 Ga0070663_100007730 3300005455 Bacteria 6566
19 Ga0070663_100013222 3300005455 Bacteria 5254
20 Ga0070663_100078957 3300005455 Bacteria 2413
21 Ga0070681_10217298 3300005458 Bacteria 1827
22 Ga0070706_100224136 3300005467 Bacteria 1755
23 Ga0070699_100030561 3300005518 Bacteria 4651
24 Ga0070679_100033491 3300005530 Bacteria 5087
25 Ga0070679_100075308 3300005530 Bacteria 3365
26 Ga0070684_100062767 3300005535 Bacteria 3255
27 Ga0070697_100249016 3300005536 Bacteria 1519
28 Ga0068853_100144128 3300005539 Bacteria 2140
29 Ga0070695_100045666 3300005545 Bacteria 2793
30 Ga0070696_100003473 3300005546 Bacteria 10471
31 Ga0070696_100014817 3300005546 Bacteria 5233
32 Ga0070693_100095475 3300005547 Bacteria 1801
33 Ga0070665_100340799 3300005548 Bacteria 1504
34 Ga0070665_100407733 3300005548 Bacteria 1367
35 Ga0070704_100002717 3300005549 Bacteria 10001
36 Ga0070704_100050865 3300005549 Bacteria 2915
37 Ga0068857_100009636 3300005577 Bacteria 8392
38 Ga0068856_100382146 3300005614 Bacteria 1427
39 Ga0068859_100004801 3300005617 Bacteria 13760
40 Ga0068861_100164575 3300005719 Bacteria 1833
41 Ga0068858_100162023 3300005842 Bacteria 2106
42 Ga0068860_100001351 3300005843 Bacteria 26648
43 Ga0068862_100001821 3300005844 Bacteria 19311
44 Ga0081540_1008114 3300005983 Bacteria 7371
45 Ga0070716_100072007 3300006173 Bacteria 2034
46 Ga0070712_100029960 3300006175 Bacteria 3652
47 Ga0075367_10134181 3300006178 Bacteria 1531
48 Ga0075369_10060537 3300006186 Bacteria 1652
49 Ga0075428_100096702 3300006844 Bacteria 3219
50 Ga0075428_100556660 3300006844 Bacteria 1226
51 Ga0075430_100022033 3300006846 Bacteria 5415
52 Ga0075430_100118858 3300006846 Bacteria 2203
53 Ga0075431_100001516 3300006847 Bacteria 21529
54 Ga0097620_100004801 3300006931 Bacteria 13760
55 Ga0105240_10353502 3300009093 Bacteria 1666
56 Ga0111539_10001219 3300009094 Bacteria 34227
57 Ga0111539_10010676 3300009094 Bacteria 11565
58 Ga0114129_10024248 3300009147 Bacteria 8595
59 Ga0114129_10174876 3300009147 Bacteria 2925
60 Ga0105249_10017557 3300009553 Bacteria 6353
61 Ga0105239_10265669 3300010375 Bacteria 1929
62 Ga0105246_10555534 3300011119 Bacteria 985
63 Ga0157373_10146696 3300013100 Bacteria 1660
64 Ga0157371_10125414 3300013102 Bacteria 1826
65 Ga0157370_10069126 3300013104 Bacteria 3336
66 Ga0157370_10177548 3300013104 Bacteria 1979
67 Ga0157369_10386512 3300013105 Bacteria 1452
68 Ga0157372_10158509 3300013307 Bacteria 2614
69 Ga0157380_10310472 3300014326 Bacteria 1457
70 Ga0213876_10009602 3300021384 Bacteria 5204
71 Ga0213876_10009999 3300021384 Bacteria 5097
72 Ga0213876_10218650 3300021384 Bacteria 1013
73 Ga0213875_10002370 3300021388 Bacteria 11335
74 Ga0213875_10020101 3300021388 Bacteria 3203
75 Ga0209130_1000967 3300025284 Bacteria 22638
76 Ga0209025_1000327 3300025294 Bacteria 106055
77 Ga0209758_1006363 3300025297 Bacteria 8536
78 Ga0207426_1000080 3300025302 Bacteria 304917
79 Ga0207653_10000431 3300025885 Bacteria 17351
80 Ga0207699_10443386 3300025906 Bacteria 930
81 Ga0207684_10214450 3300025910 Bacteria 1661
82 Ga0207654_10087050 3300025911 Bacteria 1895
83 Ga0207707_10179816 3300025912 Bacteria 1847
84 Ga0207707_10310656 3300025912 Bacteria 1362
85 Ga0207693_10080855 3300025915 Bacteria 2544
86 Ga0207660_10005290 3300025917 Bacteria 8397
87 Ga0207652_10060279 3300025921 Bacteria 3274
88 Ga0207694_10126390 3300025924 Bacteria 2046
89 Ga0207664_10239668 3300025929 Bacteria 1579
90 Ga0207665_10098844 3300025939 Bacteria 2034
91 Ga0207689_10079555 3300025942 Bacteria 2694
92 Ga0207661_10024975 3300025944 Bacteria 4538
93 Ga0207667_10249800 3300025949 Bacteria 1814
94 Ga0207712_10009997 3300025961 Bacteria 6015
95 Ga0207703_10053679 3300026035 Bacteria 3276
96 Ga0207678_10001732 3300026067 Bacteria 19963
97 Ga0207678_10019674 3300026067 Bacteria 5936
98 Ga0207678_10021268 3300026067 Bacteria 5688
99 Ga0207708_10002199 3300026075 Bacteria 14405
100 Ga0207674_10005623 3300026116 Bacteria 14860
101 Ga0207675_100254702 3300026118 Bacteria 1700
102 Ga0207428_10069352 3300027907 Bacteria 2772
103 Ga0268265_10001771 3300028380 Bacteria 17321
104 Ga0265313_10016826 3300031595 Bacteria 4191
105 Ga0307508_10124983 3300031616 Bacteria 2175
106 Ga0307510_10024444 3300033180 Bacteria 6979
107 Ga0373939_0019781 3300035114 Bacteria 1820
108 Ga0373935_0245968 3300035692 Unclassified 1250
109 Ga0373927_0000106 3300035695 Bacteria 63236
110 Ga0436364_0130250 3300037853 Bacteria 6372
111 Ga0436364_0753720 3300037853 Bacteria 11375
112 Ga0400489_85792 3300039093 Bacteria 5337
113 Ga0436365_0041342 3300039437 Bacteria 25133
114 Ga0436365_0227047 3300039437 Bacteria 2376
115 Ga0436365_1516969 3300039437 Bacteria 1801
116 Ga0436365_1770198 3300039437 Bacteria 5686
117 Ga0436360_0250826 3300039438 Bacteria 1140
118 Ga0436363_0014706 3300039450 Bacteria 16575
119 Ga0436363_0369457 3300039450 Bacteria 4030
120 Ga0436362_0475477 3300039453 Bacteria 2572
121 Ga0495638_0055416 3300046460 Bacteria 2461
122 Ga0496100_0074475 3300048903 Bacteria 2275
123 Ga0496101_0027648 3300048904 Bacteria 3954
124 Ga0496102_0002036 3300048905 Bacteria 17466
125 Ga0496105_0206306 3300048908 Bacteria 1603
126 Ga0496106_0013555 3300048909 Bacteria 6019
127 Ga0496108_0853929 3300048911 Bacteria 783
128 Ga0496109_0252202 3300048912 Bacteria 1662
129 Ga0501031_0023683 3300049568 Bacteria 4002
130 Ga0501031_0162787 3300049568 Bacteria 1458
131 Ga0501032_0006839 3300049569 Bacteria 8367
132 Ga0501032_0102032 3300049569 Bacteria 1901
133 Ga0501033_0004354 3300049570 Bacteria 11347
134 Ga0501033_0004796 3300049570 Bacteria 10798
135 Ga0501033_0029575 3300049570 Bacteria 4117
136 Ga0501033_0113907 3300049570 Bacteria 1966
137 Ga0501034_0035209 3300049571 Bacteria 5076
138 Ga0501034_0037528 3300049571 Bacteria 4907
139 Ga0501034_0162596 3300049571 Bacteria 2203
140 Ga0501034_0206286 3300049571 Bacteria 1921
141 Ga0501036_0731829 3300049572 Bacteria 816
142 Ga0501037_0000076 3300049573 Bacteria 92049
143 Ga0501038_0036034 3300049574 Bacteria 4342
144 Ga0501038_0080824 3300049574 Bacteria 2739
145 Ga0501039_0515687 3300049575 Unclassified 939
146 Ga0501042_0141527 3300049578 Bacteria 1735
147 Ga0501042_0149379 3300049578 Bacteria 1685
148 Ga0501043_0000039 3300049579 Bacteria 119155
149 Ga0501043_0159143 3300049579 Bacteria 1765
150 Ga0501043_0354476 3300049579 Bacteria 1114
151 Ga0501043_0365911 3300049579 Bacteria 1094
152 Ga0501043_0485789 3300049579 Unclassified 924
153 Ga0501046_0073610 3300049580 Bacteria 2651
154 Ga0501046_0305641 3300049580 Bacteria 1161
155 Ga0501047_0008258 3300049581 Bacteria 9828
156 Ga0501047_0020241 3300049581 Bacteria 6389
157 Ga0501047_0064685 3300049581 Bacteria 3527
158 Ga0501047_0073336 3300049581 Bacteria 3296
159 Ga0501047_0086475 3300049581 Bacteria 3012
160 Ga0501047_0351293 3300049581 Bacteria 1311
161 Ga0501068_0007169 3300049584 Bacteria 6174
162 Ga0501069_0000022 3300049585 Bacteria 119155
163 Ga0501069_0045918 3300049585 Bacteria 2421
164 Ga0501069_0196739 3300049585 Bacteria 1167
165 Ga0501070_0000080 3300049586 Bacteria 81734
166 Ga0501070_0000959 3300049586 Bacteria 26022
167 Ga0501070_0001852 3300049586 Bacteria 18673
168 Ga0501070_0051224 3300049586 Bacteria 3427
169 Ga0501070_0065202 3300049586 Bacteria 3015
170 Ga0501070_0339821 3300049586 Bacteria 1220
171 Ga0501070_0407048 3300049586 Bacteria 1100
172 Ga0501071_0051422 3300049587 Bacteria 2969
173 Ga0501073_0099746 3300049589 Bacteria 2016
174 Ga0501073_0112458 3300049589 Bacteria 1889
175 Ga0501074_0000046 3300049590 Bacteria 57165
176 Ga0501075_0076405 3300049591 Bacteria 2533
177 Ga0501075_0149675 3300049591 Bacteria 1779
178 Ga0501076_0537582 3300049592 Bacteria 964
179 Ga0501077_0187171 3300049593 Bacteria 1315
180 Ga0501079_0076843 3300049741 Bacteria 2582
181 Ga0501079_0094167 3300049741 Bacteria 2321
182 Ga0501079_0281058 3300049741 Bacteria 1301
183 Ga0501080_0012437 3300049742 Bacteria 7802
184 Ga0501080_0025751 3300049742 Bacteria 5464
185 Ga0501080_0032758 3300049742 Bacteria 4848
186 Ga0501080_0351372 3300049742 Bacteria 1331
187 Ga0501081_0080271 3300049743 Bacteria 2283
188 Ga0501081_0234435 3300049743 Bacteria 1337
189 Ga0501083_0000050 3300049744 Bacteria 86199
190 Ga0501083_0237394 3300049744 Bacteria 1187
191 Ga0501035_0000987 3300049822 Bacteria 30112
192 Ga0501035_0002532 3300049822 Bacteria 17865
193 Ga0501035_0006637 3300049822 Bacteria 10830
194 Ga0501035_0013334 3300049822 Bacteria 7584
195 Ga0501035_0089010 3300049822 Bacteria 2719
196 Ga0501044_0001241 3300049823 Bacteria 30294
197 Ga0501044_0008520 3300049823 Bacteria 11236
198 Ga0501044_0087897 3300049823 Bacteria 3138
199 Ga0501044_0361530 3300049823 Bacteria 1369
200 Ga0501044_0770507 3300049823 Bacteria 843
201 Ga0501045_0267482 3300049824 Bacteria 1273
202 Ga0501045_0435358 3300049824 Bacteria 975
203 nmdc:mga05p37_121642_c1 3300050507 Bacteria 3206
204 nmdc:mga05p37_327489_c1 3300050507 Bacteria 1811
205 nmdc:mga0qj67_92235_c1 3300050509 Bacteria 2435
206 nmdc:mga06r32_97235_c1 3300050510 Bacteria 2885
207 nmdc:mga08y16_102289_c1 3300050511 Bacteria 2983
208 nmdc:mga08y16_81518_c1 3300050511 Bacteria 3373
209 Ga0500643_038927 3300053087 Bacteria 1407
210 Ga0500568_0084962 3300053139 Bacteria 1198
211 Ga0500616_0057734 3300053153 Bacteria 2022
212 Ga0500622_0036582 3300053156 Bacteria 2566
213 Ga0500636_0010528 3300053177 Bacteria 5398
214 Ga0501084_0305602 3300054114 Bacteria 1343
215 Ga0501084_0398349 3300054114 Bacteria 1163
216 Ga0501082_0005581 3300060353 Bacteria 10928
217 Ga0501082_0082812 3300060353 Bacteria 2768
218 Ga0501082_0236673 3300060353 Bacteria 1589
219 Ga0501082_0306383 3300060353 Bacteria 1383
220 2644108367 2643221618 Bacteria 7717186
221 2644147665 2643221626 Bacteria 8069654
222 2644309419 2643221655 Bacteria 7722067
223 2644331716 2643221659 Bacteria 7890716
224 2644542097 2643221698 Bacteria 7756764
225 2644615922 2643221712 Bacteria 7729434
226 2644733768 2643221734 Bacteria 5365412
227 2844166151 2844163670 Bacteria 7266046
228 2844535212 2844533157 Bacteria 7517899
229 2909044983 2909042592 Bacteria 6499737
230 2917555823 2917554339 Bacteria 4987857
231 2941502708 2941499720 Bacteria 7599444
232 3003935723 3003930520 Bacteria 5667563
233 Ga0213874_10047629
234 JGI24740J21852_10005815
235 JGI25151J46595_10000578
236 JGI25160J50197_1007394
237 Ga0070690_100101060
238 Ga0070680_100037642
239 Ga0070691_10058780
240 Ga0070703_10000628
241 Ga0070709_10025033
242 Ga0070714_100048256
243 Ga0070714_100451278
244 Ga0070701_10035972
245 Ga0070705_100000057
246 Ga0070700_100015441
247 Ga0070694_100010689
248 Ga0070694_100392885
249 Ga0070708_100025692
250 Ga0070663_100007730
251 Ga0070663_100013222
252 Ga0070663_100078957
253 Ga0070681_10217298
254 Ga0070706_100224136
255 Ga0070699_100030561
256 Ga0070679_100033491
257 Ga0070679_100075308
258 Ga0070684_100062767
259 Ga0070697_100249016
260 Ga0068853_100144128
261 Ga0070695_100045666
262 Ga0070696_100003473
263 Ga0070696_100014817
264 Ga0070693_100095475
265 Ga0070665_100340799
266 Ga0070665_100407733
267 Ga0070704_100002717
268 Ga0070704_100050865
269 Ga0068857_100009636
270 Ga0068856_100382146
271 Ga0068859_100004801
272 Ga0068861_100164575
273 Ga0068858_100162023
274 Ga0068860_100001351
275 Ga0068862_100001821
276 Ga0081540_1008114
277 Ga0070716_100072007
278 Ga0070712_100029960
279 Ga0075367_10134181
280 Ga0075369_10060537
281 Ga0075428_100096702
282 Ga0075428_100556660
283 Ga0075430_100022033
284 Ga0075430_100118858
285 Ga0075431_100001516
286 Ga0097620_100004801
287 Ga0105240_10353502
288 Ga0111539_10001219
289 Ga0111539_10010676
290 Ga0114129_10024248
291 Ga0114129_10174876
292 Ga0105249_10017557
293 Ga0105239_10265669
294 Ga0105246_10555534
295 Ga0157373_10146696
296 Ga0157371_10125414
297 Ga0157370_10069126
298 Ga0157370_10177548
299 Ga0157369_10386512
300 Ga0157372_10158509
301 Ga0157380_10310472
302 Ga0213876_10009602
303 Ga0213876_10009999
304 Ga0213876_10218650
305 Ga0213875_10002370
306 Ga0213875_10020101
307 Ga0209130_1000967
308 Ga0209025_1000327
309 Ga0209758_1006363
310 Ga0207426_1000080
311 Ga0207653_10000431
312 Ga0207699_10443386
313 Ga0207684_10214450
314 Ga0207654_10087050
315 Ga0207707_10179816
316 Ga0207707_10310656
317 Ga0207693_10080855
318 Ga0207660_10005290
319 Ga0207652_10060279
320 Ga0207694_10126390
321 Ga0207664_10239668
322 Ga0207665_10098844
323 Ga0207689_10079555
324 Ga0207661_10024975
325 Ga0207667_10249800
326 Ga0207712_10009997
327 Ga0207703_10053679
328 Ga0207678_10001732
329 Ga0207678_10019674
330 Ga0207678_10021268
331 Ga0207708_10002199
332 Ga0207674_10005623
333 Ga0207675_100254702
334 Ga0207428_10069352
335 Ga0268265_10001771
336 Ga0265313_10016826
337 Ga0307508_10124983
338 Ga0307510_10024444
339 Ga0373939_0019781
340 Ga0373935_0245968
341 Ga0373927_0000106
342 Ga0436364_0130250
343 Ga0436364_0753720
344 Ga0400489_85792
345 Ga0436365_0041342
346 Ga0436365_0227047
347 Ga0436365_1516969
348 Ga0436365_1770198
349 Ga0436360_0250826
350 Ga0436363_0014706
351 Ga0436363_0369457
352 Ga0436362_0475477
353 Ga0495638_0055416
354 Ga0496100_0074475
355 Ga0496101_0027648
356 Ga0496102_0002036
357 Ga0496105_0206306
358 Ga0496106_0013555
359 Ga0496108_0853929
360 Ga0496109_0252202
361 Ga0501031_0023683
362 Ga0501031_0162787
363 Ga0501032_0006839
364 Ga0501032_0102032
365 Ga0501033_0004354
366 Ga0501033_0004796
367 Ga0501033_0029575
368 Ga0501033_0113907
369 Ga0501034_0035209
370 Ga0501034_0037528
371 Ga0501034_0162596
372 Ga0501034_0206286
373 Ga0501036_0731829
374 Ga0501037_0000076
375 Ga0501038_0036034
376 Ga0501038_0080824
377 Ga0501039_0515687
378 Ga0501042_0141527
379 Ga0501042_0149379
380 Ga0501043_0000039
381 Ga0501043_0159143
382 Ga0501043_0354476
383 Ga0501043_0365911
384 Ga0501043_0485789
385 Ga0501046_0073610
386 Ga0501046_0305641
387 Ga0501047_0008258
388 Ga0501047_0020241
389 Ga0501047_0064685
390 Ga0501047_0073336
391 Ga0501047_0086475
392 Ga0501047_0351293
393 Ga0501068_0007169
394 Ga0501069_0000022
395 Ga0501069_0045918
396 Ga0501069_0196739
397 Ga0501070_0000080
398 Ga0501070_0000959
399 Ga0501070_0001852
400 Ga0501070_0051224
401 Ga0501070_0065202
402 Ga0501070_0339821
403 Ga0501070_0407048
404 Ga0501071_0051422
405 Ga0501073_0099746
406 Ga0501073_0112458
407 Ga0501074_0000046
408 Ga0501075_0076405
409 Ga0501075_0149675
410 Ga0501076_0537582
411 Ga0501077_0187171
412 Ga0501079_0076843
413 Ga0501079_0094167
414 Ga0501079_0281058
415 Ga0501080_0012437
416 Ga0501080_0025751
417 Ga0501080_0032758
418 Ga0501080_0351372
419 Ga0501081_0080271
420 Ga0501081_0234435
421 Ga0501083_0000050
422 Ga0501083_0237394
423 Ga0501035_0000987
424 Ga0501035_0002532
425 Ga0501035_0006637
426 Ga0501035_0013334
427 Ga0501035_0089010
428 Ga0501044_0001241
429 Ga0501044_0008520
430 Ga0501044_0087897
431 Ga0501044_0361530
432 Ga0501044_0770507
433 Ga0501045_0267482
434 Ga0501045_0435358
435 nmdc:mga05p37_121642_c1
436 nmdc:mga05p37_327489_c1
437 nmdc:mga0qj67_92235_c1
438 nmdc:mga06r32_97235_c1
439 nmdc:mga08y16_102289_c1
440 nmdc:mga08y16_81518_c1
441 Ga0500643_038927
442 Ga0500568_0084962
443 Ga0500616_0057734
444 Ga0500622_0036582
445 Ga0500636_0010528
446 Ga0501084_0305602
447 Ga0501084_0398349
448 Ga0501082_0005581
449 Ga0501082_0082812
450 Ga0501082_0236673
451 Ga0501082_0306383
452 2644108367
453 2644147665
454 2644309419
455 2644331716
456 2644542097
457 2644615922
458 2644733768
459 2844166151
460 2844535212
461 2909044983
462 2917555823
463 2941502708
464 3003935723

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02104

SURF1

SURF1 family

41

253

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
5v03-assembly1.cif.gz_B a positive allosteric modulator binding pocket in sk2 ion channels is shared by riluzole and cyppa 0.8208 213 245
3a5n-assembly1.cif.gz_S crystal structure of a dictyostelium p109a ca2+-actin in complex with human gelsolin segment 1 0.6425 106 124
8gym-assembly1.cif.gz_d cryo-em structure of tetrahymena thermophila respiratory mega-complex mc iv2+(i+iii2+ii)2 0.6198 18 240
7w5z-assembly1.cif.gz_h cryo-em structure of tetrahymena thermophila mitochondrial complex iv, composite dimer model 0.6157 28 236
5yyu-assembly1.cif.gz_D crystal structure of staphylococcus aureus single-stranded dna-binding protein ssbb 0.5939 73 159
ID Description Score Start End Superfamily
5v02B00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8211 213 245 1.10.287.70
5v03B00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8208 213 245 1.10.287.70
4g28B00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8193 213 245 1.10.287.70
4g27B00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.818 213 245 1.10.287.70
af_Q98880_236_357_1.20.58.390 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Neurotransmitter-gated ion-channel transmembrane domain 0.7185 212 249 1.20.58.390
ID Description Score Start End GO Terms
AF-A0A2S9QDY8-F1-model_v4 SURF1-like protein 0.9884 1 247 GO:0005886
AF-A0A4Q2UB80-F1-model_v4 SURF1-like protein 0.9734 17 247 GO:0005886
AF-V4TFM4-F1-model_v4 SURF1-like protein 0.9699 9 248 GO:0005886
AF-A0A257Y344-F1-model_v4 SURF1-like protein 0.9631 7 247 GO:0005886
AF-A0A5N3P4I7-F1-model_v4 SURF1-like protein 0.9601 27 249 GO:0005886

Map