F345020

General Info

Members Datasets Scaffolds Average Seq Length
232 174 219 228

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10121239|Ga0105237_101212391
Length 253
Sequence MPDGFLHCNDRREDGHMGGSDETTATGKMIRFAHLRWLVRIIRHPSAILLLVQLIGLLLYPFIEHTRPARALFGAFGVLVLGLAISMVRRTRGRAWISACIALPAVLFNVLDLTMDMPELRPWWAALEAMFYFYAAGCLISYMLADRRATTDELFAAGATFTLLVWAFTYVFVLCQTLQPGCFSAAVDPHEARSWTELLFLSFALLSSTGIGDVIPITVHARAVASLEMFVGVMYVALVVSRLIGLTLLRRGE

Samples

Sample ID Description Type Environment
1 2537561836 Rhodanobacter spathiphylli B39 Isolate Unclassified
2 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
3 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
4 2643221562 Rhodanobacter sp. Root561 Isolate Unclassified
5 2643221577 Rhodanobacter sp. Root627 Isolate Unclassified
6 2643221585 Pelomonas sp. Root662 Isolate Unclassified
7 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
8 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
9 2643221656 Pelomonas sp. Root405 Isolate Unclassified
10 2643221685 Rhodanobacter sp. Root480 Isolate Unclassified
11 2738541337 Pelomonas sp. BT06 Isolate Unclassified
12 2831864461 Roseateles noduli HZ7 Isolate Nodule
13 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere
14 2939611941 Rhodanobacter soli 1757 Isolate Rhizosphere
15 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
16 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
17 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
18 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
19 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
20 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
21 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
22 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
23 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
24 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
25 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
26 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
27 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
28 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
29 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
30 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
31 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
32 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
33 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
34 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
35 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
36 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
37 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
38 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
39 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
40 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
41 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
42 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
45 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
46 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
93 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
94 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
95 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
96 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
97 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
98 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
99 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
100 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
101 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
102 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
103 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
104 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
105 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
106 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
107 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
108 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
109 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
110 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
111 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
112 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
113 3300042129 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 Metagenome Rhizosphere
114 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
115 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
116 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
117 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
118 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
119 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
120 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
121 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
122 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
123 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
124 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
125 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
126 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
127 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
128 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
129 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
130 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
131 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
132 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
133 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
134 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
135 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
136 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
137 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
138 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
139 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
152 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
153 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
154 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
155 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
156 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
157 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
160 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
161 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
162 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
163 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
164 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
165 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
166 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
167 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
168 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
169 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
170 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
171 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
172 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
173 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
174 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.97
Metatranscriptomes 0
Isolates 6.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.24
Nodule 0.43
Rhizoplane 4.74
Rhizosphere 64.66
Stem 0
Stem Tuber 0
Unclassified 12.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10009912 3300003316 Bacteria 2330
2 rootH1_10009912 3300003323 Bacteria 4629
3 rootL2_10001457 3300003322 Bacteria 117785
4 Ga0055526_1001590 3300003771 Bacteria 15942
5 Ga0055524_1000310 3300003775 Bacteria 46341
6 Ga0055531_10000047 3300003794 Bacteria 131742
7 Ga0055531_10002922 3300003794 Bacteria 11126
8 Ga0055543_1011358 3300004625 Bacteria 1826
9 Ga0065165_1000214 3300005262 Bacteria 100283
10 Ga0065165_1000220 3300005262 Bacteria 100027
11 Ga0070658_10278614 3300005327 Bacteria 1423
12 Ga0070683_100357534 3300005329 Bacteria 1391
13 Ga0070683_100914345 3300005329 Bacteria 842
14 Ga0070682_100148144 3300005337 Bacteria 1607
15 Ga0070691_10358910 3300005341 Bacteria 811
16 Ga0070661_100018246 3300005344 Bacteria 4987
17 Ga0070692_10007772 3300005345 Bacteria 4751
18 Ga0070669_100016947 3300005353 Bacteria 5202
19 Ga0070674_100363321 3300005356 Bacteria 1173
20 Ga0070714_100000079 3300005435 Bacteria 82899
21 Ga0070694_100143585 3300005444 Bacteria 1736
22 Ga0070663_100220389 3300005455 Bacteria 1489
23 Ga0070678_100508690 3300005456 Bacteria 1064
24 Ga0070662_100160716 3300005457 Bacteria 1757
25 Ga0070681_10015809 3300005458 Bacteria 7523
26 Ga0068867_100029081 3300005459 Bacteria 3982
27 Ga0070679_100250614 3300005530 Bacteria 1727
28 Ga0070684_100915175 3300005535 Bacteria 822
29 Ga0068853_100429746 3300005539 Bacteria 1240
30 Ga0070672_100041468 3300005543 Bacteria 3539
31 Ga0070672_100110639 3300005543 Bacteria 2238
32 Ga0070664_100262019 3300005564 Bacteria 1555
33 Ga0068857_100714223 3300005577 Bacteria 953
34 Ga0068856_100009758 3300005614 Bacteria 9328
35 Ga0068856_100044479 3300005614 Bacteria 4371
36 Ga0075367_10148192 3300006178 Bacteria 1455
37 Ga0075367_10175216 3300006178 Bacteria 1336
38 Ga0075366_10065722 3300006195 Bacteria 2157
39 Ga0075370_10001157 3300006353 Bacteria 11074
40 Ga0075370_10064372 3300006353 Bacteria 2091
41 Ga0105243_10000674 3300009148 Bacteria 33388
42 Ga0105241_10385706 3300009174 Bacteria 1225
43 Ga0105237_10121239 3300009545 Bacteria 2610
44 Ga0105237_10547662 3300009545 Bacteria 1164
45 Ga0105238_10035090 3300009551 Bacteria 5101
46 Ga0105238_10137848 3300009551 Bacteria 2418
47 Ga0105249_10285625 3300009553 Bacteria 1649
48 Ga0157319_1000003 3300012497 Bacteria 397199
49 Ga0157373_10006726 3300013100 Bacteria 8561
50 Ga0157371_10016255 3300013102 Bacteria 5559
51 Ga0157371_10036459 3300013102 Bacteria 3522
52 Ga0157369_10084598 3300013105 Bacteria 3390
53 Ga0163162_10565016 3300013306 Bacteria 1265
54 Ga0157372_10066731 3300013307 Bacteria 4042
55 Ga0157380_10633491 3300014326 Unclassified 1064
56 Ga0209673_1008981 3300025273 Bacteria 4390
57 Ga0209673_1014277 3300025273 Bacteria 3079
58 Ga0209564_1000003 3300025295 Bacteria 1585848
59 Ga0209050_1006509 3300025298 Bacteria 6886
60 Ga0209256_1000150 3300025299 Bacteria 146086
61 Ga0209051_1004820 3300025303 Bacteria 8126
62 Ga0209257_1000318 3300025304 Bacteria 101186
63 Ga0209257_1000354 3300025304 Bacteria 93718
64 Ga0207682_10075979 3300025893 Bacteria 1431
65 Ga0207688_10126906 3300025901 Bacteria 1493
66 Ga0207647_10002137 3300025904 Bacteria 15112
67 Ga0207645_10222344 3300025907 Bacteria 1245
68 Ga0207705_10001755 3300025909 Bacteria 17141
69 Ga0207705_10266924 3300025909 Bacteria 1308
70 Ga0207707_10010635 3300025912 Bacteria 7992
71 Ga0207671_10188624 3300025914 Bacteria 1607
72 Ga0207657_10048068 3300025919 Bacteria 3726
73 Ga0207649_10045370 3300025920 Bacteria 2694
74 Ga0207649_10291318 3300025920 Bacteria 1190
75 Ga0207652_10191243 3300025921 Bacteria 1841
76 Ga0207694_10122372 3300025924 Bacteria 2078
77 Ga0207694_10182238 3300025924 Bacteria 1703
78 Ga0207659_10107924 3300025926 Bacteria 2111
79 Ga0207664_10000036 3300025929 Bacteria 173396
80 Ga0207706_10018208 3300025933 Bacteria 6319
81 Ga0207706_10216558 3300025933 Bacteria 1678
82 Ga0207709_10000103 3300025935 Bacteria 131589
83 Ga0207669_10503815 3300025937 Bacteria 969
84 Ga0207661_10308263 3300025944 Bacteria 1421
85 Ga0207679_10028800 3300025945 Bacteria 3860
86 Ga0207667_10001738 3300025949 Bacteria 27400
87 Ga0207658_10595030 3300025986 Bacteria 993
88 Ga0207639_10084966 3300026041 Bacteria 2516
89 Ga0207702_10015818 3300026078 Bacteria 6246
90 Ga0207702_10069593 3300026078 Bacteria 3026
91 Ga0207648_10539663 3300026089 Bacteria 1070
92 Ga0207674_10525921 3300026116 Bacteria 1142
93 Ga0207683_10128594 3300026121 Bacteria 2278
94 Ga0207683_10319019 3300026121 Bacteria 1423
95 Ga0207698_11120388 3300026142 Bacteria 800
96 Ga0268266_10569041 3300028379 Bacteria 1087
97 Ga0307515_10000109 3300028794 Bacteria 195895
98 Ga0307515_10006984 3300028794 Bacteria 22421
99 Ga0307515_10047338 3300028794 Bacteria 6539
100 Ga0307515_10219148 3300028794 Bacteria 1726
101 Ga0307512_10018241 3300030522 Bacteria 6413
102 Ga0307408_100000010 3300031548 Bacteria 420048
103 Ga0307408_100127765 3300031548 Bacteria 1979
104 Ga0307408_100653546 3300031548 Bacteria 940
105 Ga0307516_10000038 3300031730 Bacteria 147103
106 Ga0307413_10044591 3300031824 Bacteria 2622
107 Ga0307412_10138524 3300031911 Bacteria 1779
108 Ga0307414_10022950 3300032004 Bacteria 3946
109 Ga0307414_10064192 3300032004 Bacteria 2613
110 Ga0307414_11178947 3300032004 Bacteria 709
111 Ga0307411_10013871 3300032005 Bacteria 4464
112 Ga0307510_10001131 3300033180 Bacteria 28582
113 Ga0307510_10112432 3300033180 Bacteria 2460
114 Ga0373931_0169592 3300035691 Bacteria 1285
115 Ga0451793_0379436 3300041452 Bacteria 1787
116 Ga0451793_1134707 3300041452 Bacteria 939
117 Ga0451795_1057742 3300041456 Bacteria 1277
118 Ga0451802_1921655 3300041460 Bacteria 903
119 Ga0451807_0598873 3300041486 Bacteria 1554
120 Ga0451851_0009599 3300041507 Bacteria 1335
121 Ga0451843_1657741 3300041509 Bacteria 1718
122 Ga0439437_001040 3300042000 Bacteria 2915
123 Ga0439437_006826 3300042000 Bacteria 1268
124 Ga0439445_0006746 3300042004 Bacteria 2645
125 Ga0439445_0024333 3300042004 Bacteria 1539
126 Ga0439463_107378 3300042016 Bacteria 720
127 Ga0450911_000053 3300042115 Bacteria 47364
128 Ga0450890_001561 3300042127 Bacteria 3290
129 Ga0450891_003635 3300042129 Bacteria 1473
130 Ga0450892_000282 3300042130 Bacteria 6037
131 Ga0450900_008665 3300042136 Bacteria 1276
132 Ga0450902_006305 3300042137 Bacteria 1816
133 Ga0439460_0032377 3300042461 Bacteria 1497
134 Ga0466972_0000428 3300044658 Bacteria 21873
135 Ga0466970_0000215 3300044765 Bacteria 28327
136 Ga0495638_0245291 3300046460 Bacteria 990
137 Ga0495610_0062210 3300046512 Bacteria 1771
138 Ga0495610_0080916 3300046512 Bacteria 1492
139 Ga0495620_0103049 3300046515 Bacteria 1136
140 Ga0495643_0030641 3300046522 Bacteria 3002
141 Ga0495621_0003702 3300046539 Bacteria 4230
142 Ga0495656_0000228 3300046615 Bacteria 19893
143 Ga0495625_0003162 3300046660 Bacteria 16777
144 Ga0495670_0035914 3300046691 Bacteria 2469
145 Ga0496102_0002081 3300048905 Bacteria 17212
146 Ga0496106_0221137 3300048909 Bacteria 1510
147 Ga0496109_0008275 3300048912 Bacteria 8832
148 Ga0496110_0175991 3300048913 Bacteria 1942
149 Ga0496110_0290786 3300048913 Bacteria 1488
150 Ga0496110_0422602 3300048913 Bacteria 1215
151 Ga0496117_0052949 3300048920 Bacteria 2856
152 Ga0496118_0001589 3300048921 Bacteria 33659
153 Ga0496121_0016224 3300048924 Bacteria 7708
154 Ga0496122_0112667 3300048925 Bacteria 1781
155 Ga0496124_0036991 3300048927 Bacteria 4249
156 Ga0496125_0013264 3300048928 Bacteria 8111
157 Ga0496125_0038888 3300048928 Bacteria 4107
158 Ga0496125_0041667 3300048928 Bacteria 3922
159 Ga0501298_052884 3300049521 Bacteria 846
160 Ga0501031_0186315 3300049568 Bacteria 1355
161 Ga0501032_0003596 3300049569 Bacteria 11804
162 Ga0501033_0000874 3300049570 Bacteria 27543
163 Ga0501033_0010071 3300049570 Bacteria 7253
164 Ga0501034_0009519 3300049571 Bacteria 10171
165 Ga0501034_0010891 3300049571 Bacteria 9447
166 Ga0501034_0291726 3300049571 Bacteria 1569
167 Ga0501036_0218896 3300049572 Bacteria 1599
168 Ga0501037_0050753 3300049573 Bacteria 3035
169 Ga0501038_0154336 3300049574 Bacteria 1870
170 Ga0501039_0272475 3300049575 Bacteria 1330
171 Ga0501043_0000018 3300049579 Bacteria 161101
172 Ga0501043_0003027 3300049579 Bacteria 13972
173 Ga0501043_0051511 3300049579 Bacteria 3235
174 Ga0501043_0166784 3300049579 Bacteria 1719
175 Ga0501046_0000042 3300049580 Bacteria 151850
176 Ga0501046_0006833 3300049580 Bacteria 10065
177 Ga0501046_0103320 3300049580 Bacteria 2184
178 Ga0501046_0261569 3300049580 Bacteria 1271
179 Ga0501047_0000052 3300049581 Bacteria 153448
180 Ga0501047_0071244 3300049581 Bacteria 3346
181 Ga0501048_0010225 3300049582 Bacteria 7017
182 Ga0501070_0016102 3300049586 Bacteria 6284
183 Ga0501070_0020084 3300049586 Bacteria 5602
184 Ga0501073_0049536 3300049589 Bacteria 2946
185 Ga0501074_0666649 3300049590 Bacteria 735
186 Ga0501077_0314049 3300049593 Bacteria 999
187 Ga0501227_005209 3300049665 Bacteria 2788
188 Ga0501080_0071617 3300049742 Bacteria 3224
189 Ga0501035_0016373 3300049822 Bacteria 6838
190 Ga0501035_0066197 3300049822 Bacteria 3207
191 Ga0501044_0050272 3300049823 Bacteria 4303
192 Ga0501044_0073135 3300049823 Bacteria 3485
193 Ga0501044_0235333 3300049823 Bacteria 1777
194 Ga0501044_0242628 3300049823 Bacteria 1745
195 Ga0501044_0288245 3300049823 Bacteria 1574
196 Ga0501044_0309731 3300049823 Bacteria 1506
197 Ga0501045_0016207 3300049824 Bacteria 5289
198 Ga0501045_0173415 3300049824 Bacteria 1607
199 nmdc:mga03683_131150_c1 3300050489 Bacteria 1121
200 nmdc:mga0yw44_123288_c1 3300050492 Bacteria 1671
201 nmdc:mga0k408_66161_c1 3300050493 Bacteria 2105
202 nmdc:mga0k408_9684_c1 3300050493 Bacteria 5202
203 nmdc:mga07m45_1602_c1 3300050496 Bacteria 10421
204 nmdc:mga07m45_28181_c1 3300050496 Bacteria 3100
205 nmdc:mga07m45_335299_c1 3300050496 Bacteria 879
206 nmdc:mga07m45_45858_c1 3300050496 Bacteria 2454
207 nmdc:mga08y16_909611_c1 3300050511 Bacteria 865
208 Ga0500578_0008013 3300053086 Bacteria 6923
209 Ga0500644_0002119 3300053088 Bacteria 5025
210 Ga0500651_0044756 3300053093 Bacteria 2786
211 Ga0500594_0000804 3300053118 Bacteria 6691
212 Ga0500655_003622 3300053133 Bacteria 2783
213 Ga0500559_0000203 3300053136 Bacteria 47280
214 Ga0500622_0000873 3300053156 Bacteria 25654
215 Ga0500622_0008850 3300053156 Bacteria 5603
216 Ga0500636_0143208 3300053177 Bacteria 1321
217 Ga0500645_010857 3300053730 Bacteria 2995
218 Ga0500587_000295 3300053739 Bacteria 5560
219 Ga0500587_000730 3300053739 Bacteria 4224

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049586 Ga0501070_0016102 Ga0501070_0016102_3345_3971 208
2 3300049590 Ga0501074_0666649 Ga0501074_0666649_19_645 208
3 3300005459 Ga0068867_100029081 Ga0068867_1000290812 210
4 3300005327 Ga0070658_10278614 Ga0070658_102786142 215
5 3300005535 Ga0070684_100915175 Ga0070684_1009151751 215
6 3300025909 Ga0207705_10266924 Ga0207705_102669242 215
7 3300005456 Ga0070678_100508690 Ga0070678_1005086901 216
8 3300025986 Ga0207658_10595030 Ga0207658_105950301 216
9 3300028379 Ga0268266_10569041 Ga0268266_105690412 216
10 iso_pu_bacteria 2585428062 2587759913 216
11 iso_pu_bacteria 2643221544 2643743957 217
12 iso_pu_bacteria 2643221585 2643935180 217
13 iso_pu_bacteria 2643221656 2644314922 217
14 3300041452 Ga0451793_0379436 Ga0451793_0379436_15_671 218
15 3300041486 Ga0451807_0598873 Ga0451807_0598873_305_961 218
16 3300041452 Ga0451793_1134707 Ga0451793_1134707_213_872 219
17 3300041456 Ga0451795_1057742 Ga0451795_1057742_575_1234 219
18 3300041507 Ga0451851_0009599 Ga0451851_0009599_262_921 219
19 3300041509 Ga0451843_1657741 Ga0451843_1657741_238_897 219
20 3300046660 Ga0495625_0003162 Ga0495625_0003162_11831_12490 219
21 3300049579 Ga0501043_0000018 Ga0501043_0000018_68827_69489 219
22 3300049580 Ga0501046_0000042 Ga0501046_0000042_68827_69489 219
23 3300049581 Ga0501047_0000052 Ga0501047_0000052_83960_84622 219
24 3300049582 Ga0501048_0010225 Ga0501048_0010225_3089_3751 219
25 3300049823 Ga0501044_0050272 Ga0501044_0050272_1525_2187 219
26 3300049824 Ga0501045_0016207 Ga0501045_0016207_699_1361 219
27 3300050493 nmdc:mga0k408_9684_c1 nmdc:mga0k408_9684_c1_3978_4637 219
28 3300050496 nmdc:mga07m45_28181_c1 nmdc:mga07m45_28181_c1_1514_2173 219
29 iso_pu_bacteria 2738541337 2739056775 219
30 3300005614 Ga0068856_100044479 Ga0068856_1000444794 220
31 3300006353 Ga0075370_10001157 Ga0075370_100011578 220
32 3300026078 Ga0207702_10069593 Ga0207702_100695934 220
33 3300028794 Ga0307515_10000109 Ga0307515_1000010955 220
34 3300028794 Ga0307515_10006984 Ga0307515_1000698411 220
35 3300028794 Ga0307515_10219148 Ga0307515_102191483 220
36 3300030522 Ga0307512_10018241 Ga0307512_100182415 220
37 3300031548 Ga0307408_100000010 Ga0307408_100000010195 220
38 3300031548 Ga0307408_100127765 Ga0307408_1001277652 220
39 3300032004 Ga0307414_10064192 Ga0307414_100641924 220
40 3300032004 Ga0307414_11178947 Ga0307414_111789471 220
41 3300032005 Ga0307411_10013871 Ga0307411_100138714 220
42 3300042000 Ga0439437_001040 Ga0439437_001040_1606_2274 220
43 3300042004 Ga0439445_0006746 Ga0439445_0006746_1359_2030 220
44 3300042004 Ga0439445_0024333 Ga0439445_0024333_583_1251 220
45 3300042016 Ga0439463_107378 Ga0439463_107378_39_710 220
46 3300042115 Ga0450911_000053 Ga0450911_000053_7372_8043 220
47 3300042127 Ga0450890_001561 Ga0450890_001561_42_710 220
48 3300042129 Ga0450891_003635 Ga0450891_003635_265_933 220
49 3300042130 Ga0450892_000282 Ga0450892_000282_1680_2348 220
50 3300042136 Ga0450900_008665 Ga0450900_008665_321_989 220
51 3300042137 Ga0450902_006305 Ga0450902_006305_576_1247 220
52 3300046512 Ga0495610_0080916 Ga0495610_0080916_170_832 220
53 3300046522 Ga0495643_0030641 Ga0495643_0030641_1967_2629 220
54 3300048909 Ga0496106_0221137 Ga0496106_0221137_205_867 220
55 3300048913 Ga0496110_0422602 Ga0496110_0422602_379_1047 220
56 3300048924 Ga0496121_0016224 Ga0496121_0016224_2937_3608 220
57 3300048925 Ga0496122_0112667 Ga0496122_0112667_995_1666 220
58 3300048927 Ga0496124_0036991 Ga0496124_0036991_1086_1757 220
59 3300048928 Ga0496125_0013264 Ga0496125_0013264_1489_2160 220
60 3300048928 Ga0496125_0038888 Ga0496125_0038888_1164_1835 220
61 3300048928 Ga0496125_0041667 Ga0496125_0041667_482_1153 220
62 3300049665 Ga0501227_005209 Ga0501227_005209_1692_2360 220
63 3300050496 nmdc:mga07m45_1602_c1 nmdc:mga07m45_1602_c1_787_1455 220
64 3300053086 Ga0500578_0008013 Ga0500578_0008013_3025_3687 220
65 3300053730 Ga0500645_010857 Ga0500645_010857_127_789 220
66 3300053739 Ga0500587_000730 Ga0500587_000730_1226_1927 220
67 3300003794 Ga0055531_10000047 Ga0055531_10000047108 221
68 3300005353 Ga0070669_100016947 Ga0070669_1000169475 221
69 3300005543 Ga0070672_100041468 Ga0070672_1000414682 221
70 3300009553 Ga0105249_10285625 Ga0105249_102856252 221
71 3300014326 Ga0157380_10633491 Ga0157380_106334911 221
72 3300025298 Ga0209050_1006509 Ga0209050_10065092 221
73 3300025303 Ga0209051_1004820 Ga0209051_10048203 221
74 3300025304 Ga0209257_1000354 Ga0209257_100035414 221
75 3300025937 Ga0207669_10503815 Ga0207669_105038151 221
76 3300026121 Ga0207683_10319019 Ga0207683_103190192 221
77 3300035691 Ga0373931_0169592 Ga0373931_0169592_167_892 221
78 3300046539 Ga0495621_0003702 Ga0495621_0003702_178_888 221
79 3300046615 Ga0495656_0000228 Ga0495656_0000228_18563_19228 221
80 3300046691 Ga0495670_0035914 Ga0495670_0035914_1492_2157 221
81 3300049568 Ga0501031_0186315 Ga0501031_0186315_435_1124 221
82 3300049570 Ga0501033_0000874 Ga0501033_0000874_7794_8483 221
83 3300049570 Ga0501033_0010071 Ga0501033_0010071_866_1555 221
84 3300049571 Ga0501034_0291726 Ga0501034_0291726_773_1462 221
85 3300049572 Ga0501036_0218896 Ga0501036_0218896_434_1123 221
86 3300049573 Ga0501037_0050753 Ga0501037_0050753_904_1593 221
87 3300049574 Ga0501038_0154336 Ga0501038_0154336_659_1348 221
88 3300049575 Ga0501039_0272475 Ga0501039_0272475_553_1242 221
89 3300049579 Ga0501043_0166784 Ga0501043_0166784_98_787 221
90 3300049580 Ga0501046_0103320 Ga0501046_0103320_1293_1982 221
91 3300049589 Ga0501073_0049536 Ga0501073_0049536_2202_2891 221
92 3300049742 Ga0501080_0071617 Ga0501080_0071617_1172_1861 221
93 3300049823 Ga0501044_0073135 Ga0501044_0073135_942_1631 221
94 3300049823 Ga0501044_0235333 Ga0501044_0235333_668_1357 221
95 3300049823 Ga0501044_0309731 Ga0501044_0309731_631_1353 221
96 3300049824 Ga0501045_0173415 Ga0501045_0173415_88_777 221
97 iso_pu_bacteria 2643221639 2644222034 221
98 iso_pu_bacteria 2643221646 2644257184 221
99 3300005329 Ga0070683_100357534 Ga0070683_1003575342 222
100 3300005344 Ga0070661_100018246 Ga0070661_1000182463 222
101 3300005345 Ga0070692_10007772 Ga0070692_100077722 222
102 3300005435 Ga0070714_100000079 Ga0070714_10000007961 222
103 3300005455 Ga0070663_100220389 Ga0070663_1002203891 222
104 3300005457 Ga0070662_100160716 Ga0070662_1001607163 222
105 3300005539 Ga0068853_100429746 Ga0068853_1004297462 222
106 3300005577 Ga0068857_100714223 Ga0068857_1007142231 222
107 3300005614 Ga0068856_100009758 Ga0068856_1000097587 222
108 3300006178 Ga0075367_10148192 Ga0075367_101481922 222
109 3300006195 Ga0075366_10065722 Ga0075366_100657221 222
110 3300009545 Ga0105237_10121239 Ga0105237_101212391 222
111 3300009551 Ga0105238_10137848 Ga0105238_101378484 222
112 3300013102 Ga0157371_10036459 Ga0157371_100364593 222
113 3300013105 Ga0157369_10084598 Ga0157369_100845986 222
114 3300013307 Ga0157372_10066731 Ga0157372_100667315 222
115 3300025904 Ga0207647_10002137 Ga0207647_1000213714 222
116 3300025909 Ga0207705_10001755 Ga0207705_1000175510 222
117 3300025914 Ga0207671_10188624 Ga0207671_101886242 222
118 3300025920 Ga0207649_10045370 Ga0207649_100453704 222
119 3300025924 Ga0207694_10122372 Ga0207694_101223722 222
120 3300025929 Ga0207664_10000036 Ga0207664_10000036128 222
121 3300025933 Ga0207706_10018208 Ga0207706_100182084 222
122 3300025944 Ga0207661_10308263 Ga0207661_103082632 222
123 3300025949 Ga0207667_10001738 Ga0207667_1000173827 222
124 3300026041 Ga0207639_10084966 Ga0207639_100849662 222
125 3300026078 Ga0207702_10015818 Ga0207702_100158183 222
126 3300026116 Ga0207674_10525921 Ga0207674_105259212 222
127 3300031548 Ga0307408_100653546 Ga0307408_1006535461 222
128 3300033180 Ga0307510_10001131 Ga0307510_1000113110 222
129 3300041460 Ga0451802_1921655 Ga0451802_1921655_197_865 222
130 3300042000 Ga0439437_006826 Ga0439437_006826_145_906 222
131 3300048912 Ga0496109_0008275 Ga0496109_0008275_5730_6401 222
132 3300048913 Ga0496110_0175991 Ga0496110_0175991_1051_1722 222
133 3300048913 Ga0496110_0290786 Ga0496110_0290786_100_768 222
134 3300049823 Ga0501044_0242628 Ga0501044_0242628_176_868 222
135 3300050489 nmdc:mga03683_131150_c1 nmdc:mga03683_131150_c1_258_926 222
136 3300050492 nmdc:mga0yw44_123288_c1 nmdc:mga0yw44_123288_c1_250_918 222
137 3300050493 nmdc:mga0k408_66161_c1 nmdc:mga0k408_66161_c1_1063_1731 222
138 3300050496 nmdc:mga07m45_335299_c1 nmdc:mga07m45_335299_c1_196_864 222
139 iso_pu_bacteria 2537561836 2538832894 222
140 iso_pu_bacteria 2643221562 2643830754 222
141 iso_pu_bacteria 2939611941 2939614450 222
142 3300006178 Ga0075367_10175216 Ga0075367_101752162 223
143 3300031824 Ga0307413_10044591 Ga0307413_100445912 223
144 3300044658 Ga0466972_0000428 Ga0466972_0000428_2285_3013 223
145 3300044765 Ga0466970_0000215 Ga0466970_0000215_8767_9495 223
146 3300048920 Ga0496117_0052949 Ga0496117_0052949_849_1577 223
147 3300048921 Ga0496118_0001589 Ga0496118_0001589_21956_22684 223
148 3300049822 Ga0501035_0016373 Ga0501035_0016373_6126_6797 223
149 3300049823 Ga0501044_0288245 Ga0501044_0288245_35_727 223
150 iso_pu_bacteria 2831864461 2831866818 223
151 iso_pu_bacteria 2886848708 2886852242 223
152 3300033180 Ga0307510_10112432 Ga0307510_101124324 224
153 3300046460 Ga0495638_0245291 Ga0495638_0245291_63_737 224
154 3300046512 Ga0495610_0062210 Ga0495610_0062210_506_1180 224
155 3300046515 Ga0495620_0103049 Ga0495620_0103049_257_931 224
156 3300048905 Ga0496102_0002081 Ga0496102_0002081_10253_10939 224
157 3300049822 Ga0501035_0066197 Ga0501035_0066197_2490_3164 224
158 3300053088 Ga0500644_0002119 Ga0500644_0002119_220_894 224
159 3300053093 Ga0500651_0044756 Ga0500651_0044756_730_1404 224
160 3300053118 Ga0500594_0000804 Ga0500594_0000804_5732_6406 224
161 3300053133 Ga0500655_003622 Ga0500655_003622_438_1112 224
162 3300053136 Ga0500559_0000203 Ga0500559_0000203_17734_18408 224
163 3300053156 Ga0500622_0000873 Ga0500622_0000873_7335_8009 224
164 3300053177 Ga0500636_0143208 Ga0500636_0143208_29_703 224
165 3300053739 Ga0500587_000295 Ga0500587_000295_4668_5342 224
166 3300013306 Ga0163162_10565016 Ga0163162_105650162 225
167 3300026142 Ga0207698_11120388 Ga0207698_111203881 225
168 3300032004 Ga0307414_10022950 Ga0307414_100229503 225
169 3300005329 Ga0070683_100914345 Ga0070683_1009143451 226
170 3300005356 Ga0070674_100363321 Ga0070674_1003633212 226
171 3300005543 Ga0070672_100110639 Ga0070672_1001106392 226
172 3300005564 Ga0070664_100262019 Ga0070664_1002620192 226
173 3300009148 Ga0105243_10000674 Ga0105243_1000067413 226
174 3300025893 Ga0207682_10075979 Ga0207682_100759792 226
175 3300025901 Ga0207688_10126906 Ga0207688_101269062 226
176 3300025907 Ga0207645_10222344 Ga0207645_102223441 226
177 3300025920 Ga0207649_10291318 Ga0207649_102913181 226
178 3300025926 Ga0207659_10107924 Ga0207659_101079242 226
179 3300025933 Ga0207706_10216558 Ga0207706_102165582 226
180 3300025935 Ga0207709_10000103 Ga0207709_10000103124 226
181 3300025945 Ga0207679_10028800 Ga0207679_100288003 226
182 3300026089 Ga0207648_10539663 Ga0207648_105396632 226
183 3300026121 Ga0207683_10128594 Ga0207683_101285942 226
184 3300031730 Ga0307516_10000038 Ga0307516_10000038106 226
185 3300031911 Ga0307412_10138524 Ga0307412_101385242 226
186 3300042461 Ga0439460_0032377 Ga0439460_0032377_372_1052 226
187 3300049569 Ga0501032_0003596 Ga0501032_0003596_3389_4102 226
188 3300049571 Ga0501034_0009519 Ga0501034_0009519_7425_8153 226
189 3300049571 Ga0501034_0010891 Ga0501034_0010891_4543_5256 226
190 3300049579 Ga0501043_0003027 Ga0501043_0003027_928_1641 226
191 3300049579 Ga0501043_0051511 Ga0501043_0051511_280_1002 226
192 3300049580 Ga0501046_0006833 Ga0501046_0006833_5513_6226 226
193 3300049581 Ga0501047_0071244 Ga0501047_0071244_1868_2581 226
194 3300049586 Ga0501070_0020084 Ga0501070_0020084_971_1699 226
195 3300003316 rootH1_10009912 rootH1_100099122 227
196 3300003322 rootL2_10001457 rootL2_1000145757 227
197 3300003771 Ga0055526_1001590 Ga0055526_100159014 227
198 3300003775 Ga0055524_1000310 Ga0055524_100031041 227
199 3300003794 Ga0055531_10002922 Ga0055531_100029228 227
200 3300004625 Ga0055543_1011358 Ga0055543_10113581 227
201 3300005262 Ga0065165_1000214 Ga0065165_10002147 227
202 3300005262 Ga0065165_1000220 Ga0065165_10002206 227
203 3300005337 Ga0070682_100148144 Ga0070682_1001481443 227
204 3300005341 Ga0070691_10358910 Ga0070691_103589101 227
205 3300005444 Ga0070694_100143585 Ga0070694_1001435852 227
206 3300005458 Ga0070681_10015809 Ga0070681_100158093 227
207 3300005530 Ga0070679_100250614 Ga0070679_1002506141 227
208 3300006353 Ga0075370_10064372 Ga0075370_100643723 227
209 3300009174 Ga0105241_10385706 Ga0105241_103857062 227
210 3300009545 Ga0105237_10547662 Ga0105237_105476622 227
211 3300009551 Ga0105238_10035090 Ga0105238_100350902 227
212 3300012497 Ga0157319_1000003 Ga0157319_100000387 227
213 3300013100 Ga0157373_10006726 Ga0157373_100067265 227
214 3300013102 Ga0157371_10016255 Ga0157371_100162553 227
215 3300025273 Ga0209673_1008981 Ga0209673_10089815 227
216 3300025273 Ga0209673_1014277 Ga0209673_10142773 227
217 3300025295 Ga0209564_1000003 Ga0209564_100000368 227
218 3300025299 Ga0209256_1000150 Ga0209256_100015042 227
219 3300025304 Ga0209257_1000318 Ga0209257_100031853 227
220 3300025912 Ga0207707_10010635 Ga0207707_100106354 227
221 3300025919 Ga0207657_10048068 Ga0207657_100480683 227
222 3300025921 Ga0207652_10191243 Ga0207652_101912433 227
223 3300025924 Ga0207694_10182238 Ga0207694_101822382 227
224 3300028794 Ga0307515_10047338 Ga0307515_100473382 227
225 3300049521 Ga0501298_052884 Ga0501298_052884_17_769 227
226 3300049580 Ga0501046_0261569 Ga0501046_0261569_325_1041 227
227 3300049593 Ga0501077_0314049 Ga0501077_0314049_89_820 227
228 3300050496 nmdc:mga07m45_45858_c1 nmdc:mga07m45_45858_c1_603_1286 227
229 3300050511 nmdc:mga08y16_909611_c1 nmdc:mga08y16_909611_c1_70_765 227
230 3300053156 Ga0500622_0008850 Ga0500622_0008850_3570_4253 227
231 iso_pu_bacteria 2643221577 2643895111 227
232 iso_pu_bacteria 2643221685 2644477270 227

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07885

Ion_trans_2

Ion channel

157

248

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
8c1q-assembly1.cif.gz_A resting state homomeric glua1 ampa receptor in complex with tarp gamma 3 0.9276 167 221
4gx0-assembly2.cif.gz_D crystal structure of the gsuk l97d mutant 0.8557 123 210
4gx1-assembly1.cif.gz_A crystal structure of the gsuk bound to adp 0.8545 123 219
8p3v-assembly1.cif.gz_D homomeric glua1 in tandem with tarp gamma-3, desensitized conformation 3 0.8462 136 214
8p3t-assembly1.cif.gz_C homomeric glua1 in tandem with tarp gamma-3, desensitized conformation 1 0.8415 136 220
ID Description Score Start End Superfamily
4gx5C01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8618 119 206 1.10.287.70
4gx0A01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8603 123 210 1.10.287.70
4gx2D01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8567 123 210 1.10.287.70
4gx0D01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8557 123 210 1.10.287.70
4gx1A01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8545 123 219 1.10.287.70
ID Description Score Start End GO Terms
AF-A0A838ID94-F1-model_v4 Two pore domain potassium channel family protein 0.9785 64 221 GO:0016020
GO:0034220
AF-A0A520G1E5-F1-model_v4 Two pore domain potassium channel family protein 0.9738 1 186 GO:0016020
GO:0034220
AF-A0A1H0VUA8-F1-model_v4 Ion channel 0.973 1 220 GO:0016020
AF-A0A522CCS5-F1-model_v4 Two pore domain potassium channel family protein 0.971 2 221 GO:0016020
GO:0034220
AF-A0A519Z5U0-F1-model_v4 Two pore domain potassium channel family protein 0.9709 1 219 GO:0016020
GO:0034220

Feature Viewer

pLDDT pTM Quality
82.27 0.81 High
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Predicted Structure (AlphaFold2)

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