F344534

General Info

Members Datasets Scaffolds Average Seq Length
231 177 202 446

Family's Representative Sequence

Representative Sequence 3300053161|Ga0500634_0059042|Ga0500634_0059042_384_1898
Length 504
Sequence MGTKIALRETPSLPEIIKASDFRGSREHSSDHKFGVLFMQANTPDLLASAPAPGTLIPARKFTEVAAAQRFLLEKGVSYVLAQFVDIHGVAKAKSVPVAHLETVMNEGAGFAGFAISGVGIEPHGPDFMARGDLSTLSLVPWQPELARMVCEGHVDGQPWHFDSRVLLKKQTARLAAMGLTMFSGLEPEFSLLRREQDGSISPCDASDALAKPCYDYKGLSRTRTYLEKLSNSLRATGIDVYQIDHEDANGQFELNYTYTDCLTSCDHFVFFKMAASELANDMGLVCSFMPKPFANRPGNGMHMHLSIGDGKNNLFCDKSDARGLELSEMAYHFLGGLLAHAKALTALCAPTVNSYKRLVVGRSLTGATWAPAYISYGDNNRSCMVRIPKGRLELRLPDGSCNPYLATAAVIAAGLDGIERKLDPGAPCNSNLYDWTDKQLADAGIGLLPQNLGAALDALEADSLMCEALGPLSQEFLKLKRMEWLEYQRHVSDWEIKQYLEFF

Samples

Sample ID Description Type Environment
1 2510065045 Paraburkholderia sprentiae WSM5005 Isolate Nodule
2 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
3 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
4 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
5 2513237166 Paraburkholderia azotifigens UYPR1.413 Isolate Nodule
6 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
7 2562617112 Burkholderia sp. BT03 Isolate Rhizosphere
8 2574179768 Azoarcus communis DSM 12120 Isolate Unclassified
9 2600255067 Paraburkholderia kururiensis thiooxydans NBRC 107107 Isolate Unclassified
10 2711768613 Burkholderia sp. BT03 Isolate Rhizosphere
11 2718217991 Paraburkholderia sprentiae WSM5005 Isolate Nodule
12 2751185846 Paraburkholderia ribeironis STM 7296 Isolate Unclassified
13 2791355137 Paraburkholderia piptadeniae STM7183 Isolate Unclassified
14 2842711865 Duganella sp. R-73148 Isolate Unclassified
15 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
16 2885270888 Paraburkholderia sp. UYCPa14C Isolate Unclassified
17 2904424332 Duganella sp. 1411 Isolate Rhizosphere
18 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
19 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
20 2921643360 Paraburkholderia steynii HC1.1ba Isolate Nodule
21 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
22 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
23 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
24 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
25 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
26 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
27 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
28 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
29 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
30 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
53 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
54 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
55 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
56 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
58 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027395 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
77 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
78 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
79 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
80 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
81 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
82 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
83 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
84 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
85 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
86 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
87 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
88 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
89 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
90 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
91 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
92 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
93 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
94 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
95 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
96 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
97 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
98 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
99 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
100 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
101 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
102 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
103 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
104 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
105 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
106 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
107 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
108 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
109 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
110 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
111 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
112 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
113 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
114 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
115 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
116 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
117 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
118 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
119 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
120 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
121 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
122 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
123 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
124 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
125 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
126 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
127 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
128 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
129 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
130 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
131 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
132 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
133 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
134 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
135 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
136 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
137 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
138 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
139 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
140 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
141 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
142 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
143 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
144 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
145 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
146 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
147 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
148 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
149 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
150 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
151 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
152 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
153 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
154 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
155 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
156 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
157 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
158 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
159 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
160 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
161 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
162 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
163 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
164 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
165 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
166 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
167 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
168 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
169 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
170 639633007 Azoarcus olearius BH72 Isolate Unclassified
171 642555112 Paraburkholderia phymatum STM815 Isolate Nodule
172 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
173 8020807995 Burkholderia sp. B10 Isolate Rhizosphere
174 8020945358 Burkholderia sp. BE17 Isolate Rhizosphere
175 8040173305 Burkholderia vietnamiensis BE10 Isolate Rhizosphere
176 8055266321 Paraburkholderia rhynchosiae LMG 27174 Isolate Nodule
177 8055301274 Paraburkholderia kirstenboschensis LMG 28727 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 87.45
Metatranscriptomes 0
Isolates 12.55

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.36
Nodule 4.76
Rhizoplane 5.63
Rhizosphere 71.86
Stem 0
Stem Tuber 0
Unclassified 10.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25150J39212_1001248 3300002774 Bacteria 7360
2 rootH2_10161771 3300003320 Bacteria 5481
3 rootL2_10045497 3300003322 Bacteria 4017
4 rootL2_10060097 3300003322 Bacteria 2848
5 rootH1_10087175 3300003323 Bacteria 5316
6 Ga0055526_1000289 3300003771 Bacteria 42000
7 Ga0055526_1000330 3300003771 Bacteria 39039
8 Ga0065712_10073015 3300005290 Bacteria 4534
9 Ga0070690_100001516 3300005330 Bacteria 12166
10 Ga0070675_100134653 3300005354 Bacteria 2108
11 Ga0070694_100074797 3300005444 Bacteria 2342
12 Ga0068867_100063307 3300005459 Bacteria 2749
13 Ga0070672_100022608 3300005543 Bacteria 4623
14 Ga0070672_100181315 3300005543 Bacteria 1755
15 Ga0070665_100097885 3300005548 Bacteria 2938
16 Ga0068855_100451246 3300005563 Bacteria 1403
17 Ga0068859_100005213 3300005617 Bacteria 13207
18 Ga0068864_100134576 3300005618 Bacteria 2224
19 Ga0068861_100057550 3300005719 Bacteria 2970
20 Ga0068858_100006193 3300005842 Bacteria 11667
21 Ga0075362_10034121 3300006177 Bacteria 2217
22 Ga0097621_100016900 3300006237 Bacteria 5530
23 Ga0097620_100005213 3300006931 Bacteria 13207
24 Ga0105244_10003583 3300009036 Bacteria 11034
25 Ga0105244_10007501 3300009036 Bacteria 6927
26 Ga0105243_10089477 3300009148 Bacteria 2531
27 Ga0105248_10032623 3300009177 Bacteria 5819
28 Ga0105248_10286385 3300009177 Bacteria 1855
29 Ga0105249_10249649 3300009553 Bacteria 1759
30 Ga0157370_10046659 3300013104 Bacteria 4154
31 Ga0163162_10000845 3300013306 Bacteria 28442
32 Ga0157375_10014477 3300013308 Bacteria 7036
33 Ga0157375_10019819 3300013308 Bacteria 6129
34 Ga0163163_10143294 3300014325 Bacteria 2432
35 Ga0157380_10031019 3300014326 Bacteria 4100
36 Ga0157380_10083480 3300014326 Bacteria 2617
37 Ga0157379_10077457 3300014968 Bacteria 2977
38 Ga0157376_10012132 3300014969 Bacteria 6383
39 Ga0213872_10037603 3300021361 Bacteria 2210
40 Ga0207425_1000285 3300025245 Bacteria 36990
41 Ga0209646_1000104 3300025246 Bacteria 163824
42 Ga0209025_1002850 3300025294 Bacteria 17349
43 Ga0209564_1000006 3300025295 Bacteria 1100927
44 Ga0209564_1000026 3300025295 Bacteria 519154
45 Ga0209564_1004899 3300025295 Bacteria 7935
46 Ga0209758_1000314 3300025297 Bacteria 93818
47 Ga0207655_1004344 3300025728 Bacteria 10094
48 Ga0207682_10007141 3300025893 Bacteria 4468
49 Ga0207642_10021697 3300025899 Bacteria 2533
50 Ga0207660_10044670 3300025917 Bacteria 3117
51 Ga0207659_10107443 3300025926 Bacteria 2115
52 Ga0207659_10197963 3300025926 Bacteria 1603
53 Ga0207691_10015853 3300025940 Bacteria 7163
54 Ga0207711_10021994 3300025941 Bacteria 5328
55 Ga0207689_10001506 3300025942 Bacteria 22191
56 Ga0207712_10063639 3300025961 Bacteria 2627
57 Ga0207668_10030861 3300025972 Bacteria 3525
58 Ga0207658_10254282 3300025986 Bacteria 1494
59 Ga0207648_10045930 3300026089 Bacteria 3829
60 Ga0207676_10058489 3300026095 Bacteria 3041
61 Ga0207675_100207429 3300026118 Bacteria 1883
62 Ga0209996_1002463 3300027395 Bacteria 2293
63 Ga0209995_1004514 3300027471 Bacteria 2226
64 Ga0209966_1000011 3300027695 Bacteria 83449
65 Ga0268266_10149768 3300028379 Bacteria 2102
66 Ga0265337_1000707 3300028556 Bacteria 17564
67 Ga0307515_10039210 3300028794 Bacteria 7544
68 Ga0265338_10004986 3300028800 Bacteria 17573
69 Ga0265332_10001769 3300031238 Bacteria 11670
70 Ga0265332_10017986 3300031238 Bacteria 3116
71 Ga0265328_10000325 3300031239 Bacteria 22234
72 Ga0265328_10001359 3300031239 Bacteria 11293
73 Ga0265320_10000101 3300031240 Bacteria 73166
74 Ga0265325_10001461 3300031241 Bacteria 16614
75 Ga0265339_10000363 3300031249 Bacteria 35736
76 Ga0265331_10000138 3300031250 Bacteria 96032
77 Ga0265331_10001509 3300031250 Bacteria 17169
78 Ga0265331_10054210 3300031250 Bacteria 1910
79 Ga0265327_10000299 3300031251 Bacteria 96033
80 Ga0265327_10002243 3300031251 Bacteria 20939
81 Ga0265327_10003769 3300031251 Bacteria 14067
82 Ga0265327_10004200 3300031251 Bacteria 12951
83 Ga0265327_10012670 3300031251 Bacteria 5668
84 Ga0265327_10053192 3300031251 Bacteria 2103
85 Ga0265316_10008699 3300031344 Bacteria 9394
86 Ga0265313_10001316 3300031595 Bacteria 23416
87 Ga0265314_10003294 3300031711 Bacteria 15773
88 Ga0265314_10013776 3300031711 Bacteria 6515
89 Ga0307412_10139208 3300031911 Bacteria 1775
90 Ga0307409_100020462 3300031995 Bacteria 4511
91 Ga0307411_10075975 3300032005 Bacteria 2295
92 Ga0373927_0016023 3300035695 Bacteria 4948
93 Ga0373947_0005941 3300035725 Bacteria 7113
94 Ga0373925_0031751 3300037068 Bacteria 3884
95 Ga0400490_06840 3300038726 Bacteria 9389
96 Ga0400483_147301 3300039062 Unclassified 1777
97 Ga0451577_0022212 3300042876 Bacteria 5794
98 Ga0466969_0006641 3300044656 Bacteria 6145
99 Ga0466969_0015157 3300044656 Bacteria 4041
100 Ga0453683_0004393 3300044673 Bacteria 10018
101 Ga0453684_0044220 3300044712 Bacteria 5965
102 Ga0453684_0285491 3300044712 Bacteria 1881
103 Ga0466970_0014324 3300044765 Bacteria 4070
104 Ga0466959_0057891 3300045049 Bacteria 2824
105 Ga0451576_0002864 3300045051 Bacteria 24733
106 Ga0451576_0011009 3300045051 Bacteria 10328
107 Ga0495617_000406 3300046452 Bacteria 23895
108 Ga0495638_0004541 3300046460 Bacteria 10512
109 Ga0495638_0120996 3300046460 Bacteria 1547
110 Ga0495650_0000263 3300046471 Bacteria 101749
111 Ga0495650_0001490 3300046471 Bacteria 22322
112 Ga0495580_0002459 3300046472 Bacteria 16192
113 Ga0495582_0067771 3300046473 Bacteria 1972
114 Ga0495605_0000005 3300046474 Bacteria 376973
115 Ga0495605_0000685 3300046474 Bacteria 25373
116 Ga0495605_0054202 3300046474 Bacteria 1943
117 Ga0495664_0088479 3300046477 Bacteria 1861
118 Ga0495596_0002194 3300046500 Bacteria 10640
119 Ga0495607_0005715 3300046501 Bacteria 8857
120 Ga0495607_0014165 3300046501 Bacteria 5202
121 Ga0495583_0007087 3300046506 Bacteria 7161
122 Ga0495606_0000044 3300046507 Bacteria 212802
123 Ga0495606_0000857 3300046507 Bacteria 45724
124 Ga0495606_0006576 3300046507 Bacteria 10688
125 Ga0495610_0000021 3300046512 Bacteria 336300
126 Ga0495610_0002675 3300046512 Bacteria 14693
127 Ga0495610_0009333 3300046512 Bacteria 6211
128 Ga0495610_0020987 3300046512 Bacteria 3605
129 Ga0495630_0181322 3300046517 Bacteria 1606
130 Ga0495631_0003186 3300046518 Bacteria 9027
131 Ga0495637_0000551 3300046520 Bacteria 26891
132 Ga0495643_0000138 3300046522 Bacteria 117580
133 Ga0495643_0030367 3300046522 Bacteria 3018
134 Ga0495648_0007547 3300046524 Bacteria 8693
135 Ga0495648_0033458 3300046524 Bacteria 3355
136 Ga0495642_0066523 3300046528 Bacteria 1502
137 Ga0495665_0013085 3300046531 Bacteria 4493
138 Ga0495586_0035119 3300046535 Bacteria 2693
139 Ga0495622_0000027 3300046557 Bacteria 135256
140 Ga0495633_0000841 3300046558 Bacteria 27022
141 Ga0495633_0001830 3300046558 Bacteria 15627
142 Ga0495633_0055890 3300046558 Bacteria 1855
143 Ga0495668_0000144 3300046616 Bacteria 106951
144 Ga0495668_0002209 3300046616 Bacteria 16577
145 Ga0495625_0005417 3300046660 Bacteria 11653
146 Ga0495625_0056247 3300046660 Bacteria 2802
147 Ga0495670_0004193 3300046691 Bacteria 7060
148 Ga0495671_0012124 3300046692 Bacteria 4711
149 Ga0495649_0002486 3300046694 Bacteria 12939
150 Ga0495589_0002350 3300046794 Bacteria 10618
151 Ga0495589_0020345 3300046794 Bacteria 3395
152 Ga0495674_0001890 3300047319 Bacteria 20643
153 Ga0495674_0088152 3300047319 Bacteria 2654
154 Ga0495672_0000963 3300047320 Bacteria 29941
155 Ga0495672_0001414 3300047320 Bacteria 23587
156 Ga0495672_0016228 3300047320 Bacteria 5028
157 Ga0495672_0032894 3300047320 Bacteria 3218
158 Ga0495687_043415 3300047443 Bacteria 1958
159 Ga0495673_0000033 3300047469 Bacteria 354152
160 Ga0495673_0000034 3300047469 Bacteria 326920
161 Ga0495673_0002006 3300047469 Bacteria 14980
162 Ga0495686_0002531 3300047472 Bacteria 17108
163 Ga0495686_0072871 3300047472 Bacteria 2111
164 Ga0495626_0031845 3300048091 Bacteria 2535
165 Ga0496100_0063398 3300048903 Bacteria 2442
166 Ga0496101_0113098 3300048904 Bacteria 2045
167 Ga0496102_0005705 3300048905 Bacteria 10573
168 Ga0496102_0131441 3300048905 Bacteria 2344
169 Ga0496103_0001586 3300048906 Bacteria 14987
170 Ga0496103_0050466 3300048906 Bacteria 2574
171 Ga0496105_0086463 3300048908 Bacteria 2591
172 Ga0496106_0156692 3300048909 Bacteria 1799
173 Ga0496107_0007342 3300048910 Bacteria 7599
174 Ga0496109_0069313 3300048912 Bacteria 3234
175 Ga0496113_0055728 3300048916 Bacteria 2965
176 Ga0496114_0045691 3300048917 Bacteria 3639
177 Ga0496114_0129222 3300048917 Bacteria 2180
178 Ga0496116_0033479 3300048919 Bacteria 3647
179 Ga0496121_0004981 3300048924 Bacteria 17399
180 Ga0496124_0013556 3300048927 Bacteria 7948
181 Ga0496126_0000462 3300048929 Bacteria 80871
182 Ga0496126_0050201 3300048929 Bacteria 3803
183 Ga0495678_000687 3300049459 Bacteria 31059
184 Ga0501300_001014 3300049523 Bacteria 4290
185 Ga0501072_0134092 3300049588 Bacteria 1975
186 Ga0501249_001681 3300049679 Bacteria 4514
187 Ga0501079_0015404 3300049741 Bacteria 5833
188 Ga0501079_0047926 3300049741 Bacteria 3297
189 Ga0501083_0086223 3300049744 Bacteria 2077
190 Ga0501269_000027 3300049766 Bacteria 48201
191 Ga0501280_001252 3300049776 Bacteria 4912
192 Ga0501282_000664 3300049778 Bacteria 3952
193 nmdc:mga03683_33589_c1 3300050489 Bacteria 2071
194 nmdc:mga0k408_5229_c2 3300050493 Bacteria 2916
195 nmdc:mga06r32_35844_c1 3300050510 Bacteria 4681
196 Ga0500583_0072969 3300053092 Bacteria 1644
197 Ga0500618_011040 3300053125 Bacteria 2407
198 Ga0500586_000986 3300053145 Bacteria 5867
199 Ga0500622_0031853 3300053156 Bacteria 2766
200 Ga0500634_0059042 3300053161 Bacteria 2042
201 Ga0501084_0109690 3300054114 Bacteria 2319
202 Ga0501084_0272682 3300054114 Bacteria 1429

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300054114 Ga0501084_0109690 Ga0501084_0109690_430_1713 389
2 3300050510 nmdc:mga06r32_35844_c1 nmdc:mga06r32_35844_c1_2975_4273 393
3 3300046477 Ga0495664_0088479 Ga0495664_0088479_13_1260 401
4 3300028800 Ga0265338_10004986 Ga0265338_1000498611 415
5 3300031241 Ga0265325_10001461 Ga0265325_1000146115 415
6 3300031249 Ga0265339_10000363 Ga0265339_1000036312 415
7 3300031250 Ga0265331_10001509 Ga0265331_100015092 415
8 3300031595 Ga0265313_10001316 Ga0265313_1000131613 415
9 3300035725 Ga0373947_0005941 Ga0373947_0005941_1987_3342 415
10 3300037068 Ga0373925_0031751 Ga0373925_0031751_1386_2750 415
11 3300046473 Ga0495582_0067771 Ga0495582_0067771_239_1594 415
12 3300046517 Ga0495630_0181322 Ga0495630_0181322_34_1398 415
13 iso_pu_bacteria 2919704043 2919708235 415
14 3300028556 Ga0265337_1000707 Ga0265337_100070711 416
15 3300031238 Ga0265332_10017986 Ga0265332_100179862 416
16 3300031240 Ga0265320_10000101 Ga0265320_1000010122 416
17 3300031711 Ga0265314_10003294 Ga0265314_100032948 416
18 3300003771 Ga0055526_1000330 Ga0055526_100033027 417
19 3300025295 Ga0209564_1000026 Ga0209564_1000026224 417
20 3300049744 Ga0501083_0086223 Ga0501083_0086223_730_2058 420
21 iso_pu_bacteria 2513237082 2513555319 422
22 iso_pu_bacteria 2513237166 2514050382 422
23 iso_pu_bacteria 2562617112 2563061205 422
24 iso_pu_bacteria 2574179768 2574433450 422
25 iso_pu_bacteria 2711768613 2713476166 422
26 iso_pu_bacteria 2751185846 2753568275 422
27 iso_pu_bacteria 2791355137 2792838988 422
28 iso_pu_bacteria 2904615490 2904616327 422
29 iso_pu_bacteria 2921643360 2921646887 422
30 iso_pu_bacteria 642555112 642597626 422
31 3300046520 Ga0495637_0000551 Ga0495637_0000551_10191_11510 423
32 3300046558 Ga0495633_0055890 Ga0495633_0055890_172_1479 423
33 3300049523 Ga0501300_001014 Ga0501300_001014_1589_2917 425
34 3300049741 Ga0501079_0015404 Ga0501079_0015404_4444_5796 425
35 3300049776 Ga0501280_001252 Ga0501280_001252_1422_2750 425
36 3300049778 Ga0501282_000664 Ga0501282_000664_773_2101 425
37 3300003320 rootH2_10161771 rootH2_101617716 426
38 3300003322 rootL2_10045497 rootL2_100454974 426
39 3300003322 rootL2_10060097 rootL2_100600972 426
40 3300003323 rootH1_10087175 rootH1_100871755 426
41 3300005543 Ga0070672_100022608 Ga0070672_1000226084 426
42 3300009553 Ga0105249_10249649 Ga0105249_102496492 426
43 3300013306 Ga0163162_10000845 Ga0163162_1000084527 426
44 3300013308 Ga0157375_10014477 Ga0157375_100144773 426
45 3300014326 Ga0157380_10031019 Ga0157380_100310193 426
46 3300021361 Ga0213872_10037603 Ga0213872_100376032 426
47 3300025295 Ga0209564_1004899 Ga0209564_10048993 426
48 3300025893 Ga0207682_10007141 Ga0207682_100071413 426
49 3300025926 Ga0207659_10197963 Ga0207659_101979632 426
50 3300025940 Ga0207691_10015853 Ga0207691_100158538 426
51 3300025961 Ga0207712_10063639 Ga0207712_100636392 426
52 3300025972 Ga0207668_10030861 Ga0207668_100308614 426
53 3300025986 Ga0207658_10254282 Ga0207658_102542821 426
54 3300026089 Ga0207648_10045930 Ga0207648_100459303 426
55 3300026095 Ga0207676_10058489 Ga0207676_100584892 426
56 3300026118 Ga0207675_100207429 Ga0207675_1002074292 426
57 3300027395 Ga0209996_1002463 Ga0209996_10024632 426
58 3300027471 Ga0209995_1004514 Ga0209995_10045142 426
59 3300027695 Ga0209966_1000011 Ga0209966_100001124 426
60 3300031238 Ga0265332_10001769 Ga0265332_100017697 426
61 3300031251 Ga0265327_10003769 Ga0265327_1000376913 426
62 3300031344 Ga0265316_10008699 Ga0265316_100086992 426
63 3300031711 Ga0265314_10013776 Ga0265314_100137765 426
64 3300032005 Ga0307411_10075975 Ga0307411_100759752 426
65 3300042876 Ga0451577_0022212 Ga0451577_0022212_253_1611 426
66 3300044656 Ga0466969_0006641 Ga0466969_0006641_1254_2648 426
67 3300044673 Ga0453683_0004393 Ga0453683_0004393_8040_9398 426
68 3300044712 Ga0453684_0044220 Ga0453684_0044220_4184_5542 426
69 3300044765 Ga0466970_0014324 Ga0466970_0014324_2094_3488 426
70 3300045051 Ga0451576_0011009 Ga0451576_0011009_785_2143 426
71 3300046452 Ga0495617_000406 Ga0495617_000406_15004_16329 426
72 3300046460 Ga0495638_0004541 Ga0495638_0004541_6375_7703 426
73 3300046472 Ga0495580_0002459 Ga0495580_0002459_7005_8414 426
74 3300046474 Ga0495605_0000685 Ga0495605_0000685_19032_20360 426
75 3300046474 Ga0495605_0054202 Ga0495605_0054202_345_1673 426
76 3300046500 Ga0495596_0002194 Ga0495596_0002194_4523_5851 426
77 3300046501 Ga0495607_0014165 Ga0495607_0014165_2730_4058 426
78 3300046506 Ga0495583_0007087 Ga0495583_0007087_3132_4460 426
79 3300046518 Ga0495631_0003186 Ga0495631_0003186_2574_3902 426
80 3300046522 Ga0495643_0030367 Ga0495643_0030367_317_1645 426
81 3300046524 Ga0495648_0007547 Ga0495648_0007547_2310_3638 426
82 3300046528 Ga0495642_0066523 Ga0495642_0066523_105_1433 426
83 3300046531 Ga0495665_0013085 Ga0495665_0013085_1598_2926 426
84 3300046535 Ga0495586_0035119 Ga0495586_0035119_1023_2351 426
85 3300046691 Ga0495670_0004193 Ga0495670_0004193_5691_7019 426
86 3300046794 Ga0495589_0002350 Ga0495589_0002350_119_1447 426
87 3300046794 Ga0495589_0020345 Ga0495589_0020345_1134_2462 426
88 3300047319 Ga0495674_0001890 Ga0495674_0001890_9080_10408 426
89 3300047319 Ga0495674_0088152 Ga0495674_0088152_423_1751 426
90 3300047320 Ga0495672_0000963 Ga0495672_0000963_20280_21674 426
91 3300047320 Ga0495672_0016228 Ga0495672_0016228_1230_2558 426
92 3300047320 Ga0495672_0032894 Ga0495672_0032894_1716_3044 426
93 3300047443 Ga0495687_043415 Ga0495687_043415_263_1591 426
94 3300047469 Ga0495673_0002006 Ga0495673_0002006_7412_8740 426
95 3300047472 Ga0495686_0072871 Ga0495686_0072871_491_1879 426
96 3300048091 Ga0495626_0031845 Ga0495626_0031845_748_2076 426
97 3300048903 Ga0496100_0063398 Ga0496100_0063398_106_1434 426
98 3300048904 Ga0496101_0113098 Ga0496101_0113098_305_1633 426
99 3300048905 Ga0496102_0005705 Ga0496102_0005705_5831_7159 426
100 3300048905 Ga0496102_0131441 Ga0496102_0131441_709_2037 426
101 3300048906 Ga0496103_0050466 Ga0496103_0050466_492_1820 426
102 3300048908 Ga0496105_0086463 Ga0496105_0086463_278_1606 426
103 3300048909 Ga0496106_0156692 Ga0496106_0156692_309_1637 426
104 3300048910 Ga0496107_0007342 Ga0496107_0007342_1362_2690 426
105 3300048916 Ga0496113_0055728 Ga0496113_0055728_936_2264 426
106 3300048924 Ga0496121_0004981 Ga0496121_0004981_12401_13729 426
107 3300048929 Ga0496126_0000462 Ga0496126_0000462_72047_73459 426
108 3300053125 Ga0500618_011040 Ga0500618_011040_638_2038 426
109 3300053161 Ga0500634_0059042 Ga0500634_0059042_384_1898 426
110 iso_pu_bacteria 2510065045 2510247478 426
111 iso_pu_bacteria 2510917013 2511088333 426
112 iso_pu_bacteria 2513237083 2513566326 426
113 iso_pu_bacteria 2515154189 2516023185 426
114 iso_pu_bacteria 2600255067 2600811325 426
115 iso_pu_bacteria 2718217991 2719638346 426
116 iso_pu_bacteria 2870068957 2870072481 426
117 iso_pu_bacteria 2885270888 2885275524 426
118 iso_pu_bacteria 2904424332 2904429842 426
119 iso_pu_bacteria 639633007 639788166 426
120 iso_pu_bacteria 8003955200 8003962709 426
121 iso_pu_bacteria 8020807995 8020811394 426
122 iso_pu_bacteria 8020945358 8020947884 426
123 iso_pu_bacteria 8040173305 8040177136 426
124 iso_pu_bacteria 8055266321 8055267703 426
125 iso_pu_bacteria 8055266321 8055272383 426
126 iso_pu_bacteria 8055301274 8055308920 426
127 3300005290 Ga0065712_10073015 Ga0065712_100730153 427
128 3300005330 Ga0070690_100001516 Ga0070690_1000015167 427
129 3300005354 Ga0070675_100134653 Ga0070675_1001346532 427
130 3300005444 Ga0070694_100074797 Ga0070694_1000747972 427
131 3300005459 Ga0068867_100063307 Ga0068867_1000633072 427
132 3300005543 Ga0070672_100181315 Ga0070672_1001813152 427
133 3300005548 Ga0070665_100097885 Ga0070665_1000978853 427
134 3300005563 Ga0068855_100451246 Ga0068855_1004512461 427
135 3300005617 Ga0068859_100005213 Ga0068859_1000052135 427
136 3300005618 Ga0068864_100134576 Ga0068864_1001345762 427
137 3300005719 Ga0068861_100057550 Ga0068861_1000575502 427
138 3300005842 Ga0068858_100006193 Ga0068858_1000061936 427
139 3300006237 Ga0097621_100016900 Ga0097621_1000169003 427
140 3300006931 Ga0097620_100005213 Ga0097620_1000052137 427
141 3300009148 Ga0105243_10089477 Ga0105243_100894772 427
142 3300009177 Ga0105248_10032623 Ga0105248_100326232 427
143 3300009177 Ga0105248_10286385 Ga0105248_102863851 427
144 3300013104 Ga0157370_10046659 Ga0157370_100466593 427
145 3300013308 Ga0157375_10019819 Ga0157375_100198193 427
146 3300014325 Ga0163163_10143294 Ga0163163_101432943 427
147 3300014326 Ga0157380_10083480 Ga0157380_100834802 427
148 3300014968 Ga0157379_10077457 Ga0157379_100774573 427
149 3300014969 Ga0157376_10012132 Ga0157376_100121323 427
150 3300025899 Ga0207642_10021697 Ga0207642_100216972 427
151 3300025917 Ga0207660_10044670 Ga0207660_100446703 427
152 3300025926 Ga0207659_10107443 Ga0207659_101074432 427
153 3300025941 Ga0207711_10021994 Ga0207711_100219943 427
154 3300025942 Ga0207689_10001506 Ga0207689_100015063 427
155 3300028379 Ga0268266_10149768 Ga0268266_101497682 427
156 3300028794 Ga0307515_10039210 Ga0307515_100392103 427
157 3300031239 Ga0265328_10000325 Ga0265328_1000032513 427
158 3300031239 Ga0265328_10001359 Ga0265328_100013594 427
159 3300031250 Ga0265331_10000138 Ga0265331_100001386 427
160 3300031250 Ga0265331_10054210 Ga0265331_100542102 427
161 3300031251 Ga0265327_10000299 Ga0265327_1000029988 427
162 3300031251 Ga0265327_10002243 Ga0265327_1000224316 427
163 3300031251 Ga0265327_10004200 Ga0265327_100042005 427
164 3300031251 Ga0265327_10012670 Ga0265327_100126703 427
165 3300031251 Ga0265327_10053192 Ga0265327_100531922 427
166 3300031911 Ga0307412_10139208 Ga0307412_101392082 427
167 3300031995 Ga0307409_100020462 Ga0307409_1000204624 427
168 3300035695 Ga0373927_0016023 Ga0373927_0016023_836_2212 427
169 3300038726 Ga0400490_06840 Ga0400490_06840_6749_8086 427
170 3300039062 Ga0400483_147301 Ga0400483_147301_21_1358 427
171 3300044656 Ga0466969_0015157 Ga0466969_0015157_433_1767 427
172 3300044712 Ga0453684_0285491 Ga0453684_0285491_488_1822 427
173 3300045049 Ga0466959_0057891 Ga0466959_0057891_642_1976 427
174 3300048912 Ga0496109_0069313 Ga0496109_0069313_1825_3201 427
175 3300048917 Ga0496114_0129222 Ga0496114_0129222_392_1753 427
176 3300049588 Ga0501072_0134092 Ga0501072_0134092_94_1467 427
177 3300049741 Ga0501079_0047926 Ga0501079_0047926_1062_2435 427
178 3300053092 Ga0500583_0072969 Ga0500583_0072969_234_1565 427
179 3300053156 Ga0500622_0031853 Ga0500622_0031853_685_2016 427
180 3300054114 Ga0501084_0272682 Ga0501084_0272682_21_1394 427
181 3300045051 Ga0451576_0002864 Ga0451576_0002864_12155_13486 428
182 3300046512 Ga0495610_0000021 Ga0495610_0000021_263230_264579 428
183 3300050493 nmdc:mga0k408_5229_c2 nmdc:mga0k408_5229_c2_247_1593 429
184 3300006177 Ga0075362_10034121 Ga0075362_100341212 430
185 3300009036 Ga0105244_10003583 Ga0105244_100035836 430
186 3300046471 Ga0495650_0000263 Ga0495650_0000263_81803_83164 430
187 3300046507 Ga0495606_0000857 Ga0495606_0000857_25489_26859 430
188 3300046557 Ga0495622_0000027 Ga0495622_0000027_18889_20259 430
189 3300046660 Ga0495625_0056247 Ga0495625_0056247_116_1450 430
190 3300048906 Ga0496103_0001586 Ga0496103_0001586_12281_13615 430
191 3300048917 Ga0496114_0045691 Ga0496114_0045691_595_1929 430
192 3300049679 Ga0501249_001681 Ga0501249_001681_1733_3067 430
193 3300049766 Ga0501269_000027 Ga0501269_000027_11171_12505 430
194 3300050489 nmdc:mga03683_33589_c1 nmdc:mga03683_33589_c1_271_1605 430
195 iso_pu_bacteria 2842711865 2842713799 430
196 3300002774 JGI25150J39212_1001248 JGI25150J39212_10012483 432
197 3300003771 Ga0055526_1000289 Ga0055526_100028930 432
198 3300009036 Ga0105244_10007501 Ga0105244_100075016 432
199 3300025245 Ga0207425_1000285 Ga0207425_100028523 432
200 3300025246 Ga0209646_1000104 Ga0209646_100010467 432
201 3300025294 Ga0209025_1002850 Ga0209025_100285016 432
202 3300025295 Ga0209564_1000006 Ga0209564_1000006763 432
203 3300025297 Ga0209758_1000314 Ga0209758_100031440 432
204 3300025728 Ga0207655_1004344 Ga0207655_10043448 432
205 3300046460 Ga0495638_0120996 Ga0495638_0120996_67_1410 432
206 3300046471 Ga0495650_0001490 Ga0495650_0001490_15955_17262 432
207 3300046474 Ga0495605_0000005 Ga0495605_0000005_280258_281565 432
208 3300046501 Ga0495607_0005715 Ga0495607_0005715_4480_5787 432
209 3300046507 Ga0495606_0000044 Ga0495606_0000044_113697_115004 432
210 3300046507 Ga0495606_0006576 Ga0495606_0006576_4106_5455 432
211 3300046512 Ga0495610_0002675 Ga0495610_0002675_6712_8019 432
212 3300046512 Ga0495610_0009333 Ga0495610_0009333_1971_3320 432
213 3300046512 Ga0495610_0020987 Ga0495610_0020987_1395_2771 432
214 3300046522 Ga0495643_0000138 Ga0495643_0000138_5058_6413 432
215 3300046524 Ga0495648_0033458 Ga0495648_0033458_1666_3021 432
216 3300046558 Ga0495633_0000841 Ga0495633_0000841_17056_18453 432
217 3300046558 Ga0495633_0001830 Ga0495633_0001830_2518_3894 432
218 3300046616 Ga0495668_0000144 Ga0495668_0000144_97162_98469 432
219 3300046616 Ga0495668_0002209 Ga0495668_0002209_4708_6015 432
220 3300046660 Ga0495625_0005417 Ga0495625_0005417_6590_7945 432
221 3300046692 Ga0495671_0012124 Ga0495671_0012124_702_2057 432
222 3300046694 Ga0495649_0002486 Ga0495649_0002486_7526_8881 432
223 3300047320 Ga0495672_0001414 Ga0495672_0001414_5067_6422 432
224 3300047469 Ga0495673_0000033 Ga0495673_0000033_240442_241803 432
225 3300047469 Ga0495673_0000034 Ga0495673_0000034_71348_72703 432
226 3300047472 Ga0495686_0002531 Ga0495686_0002531_8106_9413 432
227 3300048919 Ga0496116_0033479 Ga0496116_0033479_1254_2561 432
228 3300048927 Ga0496124_0013556 Ga0496124_0013556_3969_5276 432
229 3300048929 Ga0496126_0050201 Ga0496126_0050201_1565_2926 432
230 3300049459 Ga0495678_000687 Ga0495678_000687_24630_25985 432
231 3300053145 Ga0500586_000986 Ga0500586_000986_3898_5274 432

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00120

Gln-synt_C

Glutamine synthetase, catalytic domain

161

500

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7cqw-assembly1.cif.gz_A gmas/adp complex-conformation 1 0.9299 6 430
7cql-assembly1.cif.gz_A apo gmas without ligand 0.9296 6 430
8tfk-assembly1.cif.gz_C cryo-em structure of the methanosarcina mazei glutamine synthetase (gs) with met-sox-p and adp 0.9222 1 432
8tfk-assembly1.cif.gz_C cryo-em structure of the methanosarcina mazei glutamine synthetase (gs) with met-sox-p and adp 0.9201 1 432
7cql-assembly1.cif.gz_A apo gmas without ligand 0.9189 6 430
ID Description Score Start End Superfamily
af_Q0IX96_508_833_3.30.590.10 Alpha Beta;2-Layer Sandwich;Creatine Kinase; Chain A, domain 2;Glutamine synthetase/guanido kinase, catalytic domain 0.9042 104 419 3.30.590.10
af_P0C7B6_183_520_3.30.590.10 Alpha Beta;2-Layer Sandwich;Creatine Kinase; Chain A, domain 2;Glutamine synthetase/guanido kinase, catalytic domain 0.9038 104 430 3.30.590.10
3qajA02 Alpha Beta;2-Layer Sandwich;Creatine Kinase; Chain A, domain 2;Glutamine synthetase/guanido kinase, catalytic domain 0.902 104 432 3.30.590.10
af_P78061_136_471_3.30.590.10 Alpha Beta;2-Layer Sandwich;Creatine Kinase; Chain A, domain 2;Glutamine synthetase/guanido kinase, catalytic domain 0.8956 104 429 3.30.590.10
af_I6X5K1_121_455_3.30.590.10 Alpha Beta;2-Layer Sandwich;Creatine Kinase; Chain A, domain 2;Glutamine synthetase/guanido kinase, catalytic domain 0.8937 104 429 3.30.590.10
ID Description Score Start End GO Terms
AF-A0A7C1VPG2-F1-model_v4 Type III glutamate--ammonia ligase (EC 6.3.1.2) 0.9731 114 432 GO:0004356
GO:0006542
AF-A0A3D4GT71-F1-model_v4 Type III glutamate--ammonia ligase 0.9718 183 432 GO:0004356
GO:0006542
AF-A0A2W7AT05-F1-model_v4 Type III glutamate--ammonia ligase 0.9712 15 432 GO:0004356
GO:0006542
AF-A0A656JWG6-F1-model_v4 Glutamine synthetase 0.9698 210 432 GO:0004356
AF-A0A1H1G035-F1-model_v4 Gamma-glutamylmethylamide synthetase (Type III glutamate--ammonia ligase (EC 6.3.1.2)) 0.9675 3 432 GO:0004356
GO:0006542

Feature Viewer

pLDDT pTM Quality
91.69 0.93 High
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Predicted Structure (AlphaFold2)

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