F343987

General Info

Members Datasets Scaffolds Average Seq Length
231 152 462 498

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10098789|Ga0114129_100987892
Length 520
Sequence MSNKESDMDNELRRDAPIEIDSATFRKLGHRLVDQVAEFLESMPHGPVNHDESPSSVRDALDLSGPLPEFGMDPAPLLEQTAELLFAHSLFNGHPRFFGYITAPPAPIGILGDFLASAVNPNVGAWILSPAATEIESQTVRWIASLIDYPADCGGLLLSGGNMANIICFLTARAAKAKWDERDLIMVNDSGHRLRVYASTETHTWIHKAADCSGLGNASIRWIAVDKKLRMDVDALRRQIEADVTGGDVPCLVVGTAGSVSTGAVDPLPEIAELCREYRAWFHVDGAYGGFAACVPEASFDLRGLSHADSVAVDPHKWLYAPLEAGCALVRDPEVLRSAFAYHPPYYHFEESATNYVDYGLQNSRGFRALKVWLALKHAGAAGYRKMIADDIRLSKAMAQAIDSHAELQLMTQDLSIATFRYVPLDLRAQLQDPAIERHLDALNRELLDRLQRGGETFVSNAVVDGHYVLRACIVNFHTASADVEAVPAIVARIGRVVDAEMRPAISQSEQGNRNPGTRA

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
51 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
84 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
86 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
87 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
88 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
89 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
90 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
91 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
92 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
93 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
94 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
95 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
96 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
97 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
98 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
99 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
100 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
101 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
102 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
103 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
104 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
105 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
106 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
107 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
108 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
109 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
110 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
111 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
112 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
113 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
114 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
115 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
116 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
117 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
118 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
121 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
122 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
133 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
134 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
135 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
136 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
137 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
138 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
139 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
140 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
141 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
143 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
144 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
145 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
146 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
147 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
148 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
149 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
150 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
151 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
152 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 5.63
Rhizosphere 94.37
Stem 0
Stem Tuber 0
Unclassified 12.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10098789 3300009147 Bacteria 4040
2 Ga0065704_10082455 3300005289 Unclassified 3598
3 Ga0065715_10115341 3300005293 Bacteria 2418
4 Ga0065715_10125801 3300005293 Bacteria 2122
5 Ga0065707_10002333 3300005295 Bacteria 10463
6 Ga0065707_10007519 3300005295 Bacteria 3737
7 Ga0070690_100021953 3300005330 Unclassified 3902
8 Ga0070670_100000980 3300005331 Bacteria 22371
9 Ga0070670_100008252 3300005331 Bacteria 8869
10 Ga0068869_100067864 3300005334 Bacteria 2632
11 Ga0068868_100006489 3300005338 Bacteria 8282
12 Ga0068868_100055664 3300005338 Bacteria 3122
13 Ga0070687_100044052 3300005343 Bacteria 2271
14 Ga0070669_100000399 3300005353 Bacteria 33282
15 Ga0070675_100098044 3300005354 Unclassified 2465
16 Ga0070671_100103135 3300005355 Bacteria 2393
17 Ga0070673_100127416 3300005364 Bacteria 2131
18 Ga0070673_100139425 3300005364 Bacteria 2044
19 Ga0070688_100081674 3300005365 Unclassified 2094
20 Ga0070659_100189896 3300005366 Bacteria 1688
21 Ga0070713_100008525 3300005436 Bacteria 7272
22 Ga0070711_100000111 3300005439 Bacteria 42762
23 Ga0070700_100010359 3300005441 Bacteria 5145
24 Ga0070700_100033308 3300005441 Bacteria 3102
25 Ga0070678_100085789 3300005456 Unclassified 2400
26 Ga0070678_100090017 3300005456 Bacteria 2350
27 Ga0068867_100078669 3300005459 Bacteria 2480
28 Ga0070672_100007103 3300005543 Bacteria 7574
29 Ga0070672_100039918 3300005543 Unclassified 3598
30 Ga0070665_100044381 3300005548 Bacteria 4464
31 Ga0070664_100000131 3300005564 Bacteria 49975
32 Ga0068857_100005889 3300005577 Bacteria 10466
33 Ga0068857_100011022 3300005577 Bacteria 7870
34 Ga0068859_100080379 3300005617 Bacteria 3301
35 Ga0068859_100208321 3300005617 Bacteria 2041
36 Ga0068864_100003459 3300005618 Bacteria 13039
37 Ga0068864_100107047 3300005618 Bacteria 2487
38 Ga0068864_100129102 3300005618 Unclassified 2268
39 Ga0068863_100002265 3300005841 Bacteria 19126
40 Ga0068858_100004558 3300005842 Bacteria 13571
41 Ga0068862_100102525 3300005844 Unclassified 2505
42 Ga0070712_100010213 3300006175 Bacteria 5919
43 Ga0097621_100007741 3300006237 Bacteria 7702
44 Ga0068871_100011632 3300006358 Bacteria 6462
45 Ga0075433_10098585 3300006852 Bacteria 2587
46 Ga0075434_100002940 3300006871 Bacteria 15150
47 Ga0075434_100034649 3300006871 Bacteria 4987
48 Ga0068865_100026809 3300006881 Bacteria 3802
49 Ga0068865_100087349 3300006881 Unclassified 2254
50 Ga0097620_100080380 3300006931 Bacteria 3301
51 Ga0097620_100208317 3300006931 Bacteria 2041
52 Ga0075435_100005857 3300007076 Bacteria 8647
53 Ga0075435_100031957 3300007076 Bacteria 4153
54 Ga0111539_10007864 3300009094 Bacteria 13616
55 Ga0111539_10052657 3300009094 Bacteria 4845
56 Ga0105245_10079154 3300009098 Bacteria 3000
57 Ga0105247_10070083 3300009101 Bacteria 2190
58 Ga0114129_10084314 3300009147 Bacteria 4412
59 Ga0114129_10169915 3300009147 Unclassified 2973
60 Ga0105242_10019208 3300009176 Bacteria 5354
61 Ga0105242_10073744 3300009176 Bacteria 2839
62 Ga0105248_10067736 3300009177 Bacteria 4008
63 Ga0105248_10105855 3300009177 Bacteria 3172
64 Ga0105248_10173792 3300009177 Bacteria 2428
65 Ga0105237_10216959 3300009545 Unclassified 1913
66 Ga0105249_10043800 3300009553 Bacteria 4071
67 Ga0105246_10071213 3300011119 Unclassified 2447
68 Ga0157378_10348729 3300013297 Bacteria 1445
69 Ga0163162_10003173 3300013306 Bacteria 15715
70 Ga0157375_10007210 3300013308 Bacteria 9722
71 Ga0163163_10023053 3300014325 Bacteria 5903
72 Ga0163163_10091070 3300014325 Bacteria 3063
73 Ga0163163_10097976 3300014325 Bacteria 2953
74 Ga0163163_10195096 3300014325 Bacteria 2073
75 Ga0157380_10017978 3300014326 Bacteria 5243
76 Ga0157377_10031373 3300014745 Bacteria 2887
77 Ga0157376_10015632 3300014969 Bacteria 5740
78 Ga0207697_10002478 3300025315 Bacteria 9543
79 Ga0207682_10041670 3300025893 Bacteria 1874
80 Ga0207688_10040367 3300025901 Bacteria 2593
81 Ga0207705_10125575 3300025909 Bacteria 1907
82 Ga0207695_10112696 3300025913 Bacteria 2697
83 Ga0207693_10000793 3300025915 Bacteria 28228
84 Ga0207693_10003156 3300025915 Bacteria 14170
85 Ga0207663_10004612 3300025916 Bacteria 6869
86 Ga0207657_10064130 3300025919 Bacteria 3137
87 Ga0207649_10077419 3300025920 Unclassified 2143
88 Ga0207681_10024466 3300025923 Bacteria 3876
89 Ga0207650_10032925 3300025925 Unclassified 3751
90 Ga0207650_10081333 3300025925 Bacteria 2457
91 Ga0207659_10040455 3300025926 Unclassified 3260
92 Ga0207659_10074993 3300025926 Unclassified 2481
93 Ga0207644_10117489 3300025931 Bacteria 2020
94 Ga0207670_10041966 3300025936 Bacteria 3011
95 Ga0207670_10093454 3300025936 Bacteria 2131
96 Ga0207669_10077434 3300025937 Bacteria 2115
97 Ga0207704_10009914 3300025938 Bacteria 4620
98 Ga0207691_10011393 3300025940 Bacteria 8535
99 Ga0207691_10047088 3300025940 Unclassified 3959
100 Ga0207691_10047125 3300025940 Bacteria 3957
101 Ga0207711_10020613 3300025941 Bacteria 5501
102 Ga0207711_10063065 3300025941 Bacteria 3198
103 Ga0207711_10065149 3300025941 Bacteria 3149
104 Ga0207711_10092274 3300025941 Bacteria 2665
105 Ga0207689_10017142 3300025942 Bacteria 6130
106 Ga0207679_10011342 3300025945 Bacteria 5766
107 Ga0207679_10016062 3300025945 Bacteria 4964
108 Ga0207679_10061397 3300025945 Bacteria 2798
109 Ga0207651_10005703 3300025960 Bacteria 6428
110 Ga0207651_10023204 3300025960 Unclassified 3811
111 Ga0207651_10037870 3300025960 Bacteria 3163
112 Ga0207712_10041146 3300025961 Bacteria 3175
113 Ga0207658_10120658 3300025986 Bacteria 2090
114 Ga0207677_10035930 3300026023 Bacteria 3223
115 Ga0207703_10007946 3300026035 Bacteria 8383
116 Ga0207703_10074031 3300026035 Unclassified 2819
117 Ga0207708_10012016 3300026075 Bacteria 6450
118 Ga0207641_10013060 3300026088 Bacteria 6811
119 Ga0207641_10027723 3300026088 Bacteria 4679
120 Ga0207641_10029727 3300026088 Bacteria 4520
121 Ga0207648_10002371 3300026089 Bacteria 20305
122 Ga0207648_10063216 3300026089 Bacteria 3227
123 Ga0207674_10015071 3300026116 Bacteria 8510
124 Ga0207674_10055623 3300026116 Unclassified 4022
125 Ga0207683_10060507 3300026121 Unclassified 3329
126 Ga0207683_10132985 3300026121 Bacteria 2238
127 Ga0207428_10009483 3300027907 Bacteria 8717
128 Ga0268265_10030598 3300028380 Bacteria 3879
129 Ga0316578_10079308 3300031728 Bacteria 1952
130 Ga0307409_100090686 3300031995 Bacteria 2503
131 Ga0307416_100164883 3300032002 Bacteria 2054
132 Ga0316574_0056869 3300035398 Bacteria 2448
133 Ga0373937_0028061 3300036401 Bacteria 5093
134 Ga0373937_0223771 3300036401 Unclassified 1771
135 Ga0466963_0025433 3300044694 Bacteria 3776
136 Ga0451576_0014586 3300045051 Bacteria 8734
137 Ga0466967_0166784 3300045976 Bacteria 2070
138 Ga0495592_0068035 3300046454 Unclassified 2601
139 Ga0495603_0037490 3300046455 Unclassified 2909
140 Ga0495629_0044821 3300046459 Bacteria 3104
141 Ga0495651_0004725 3300046462 Bacteria 10424
142 Ga0495582_0003346 3300046473 Bacteria 9015
143 Ga0495662_0027804 3300046476 Bacteria 2732
144 Ga0495608_0005888 3300046511 Bacteria 8725
145 Ga0495608_0079247 3300046511 Bacteria 2136
146 Ga0495618_0029492 3300046514 Unclassified 3424
147 Ga0495618_0038145 3300046514 Bacteria 3019
148 Ga0495630_0025110 3300046517 Bacteria 4405
149 Ga0495630_0125409 3300046517 Bacteria 1949
150 Ga0495586_0084521 3300046535 Unclassified 1747
151 Ga0495621_0052518 3300046539 Bacteria 1461
152 Ga0495667_0000134 3300046559 Bacteria 51585
153 Ga0495667_0003475 3300046559 Bacteria 10556
154 Ga0495634_0049195 3300046642 Bacteria 2836
155 Ga0495635_0054101 3300046663 Bacteria 2765
156 Ga0495657_0002116 3300046675 Bacteria 16871
157 Ga0495658_0000515 3300046683 Bacteria 21193
158 Ga0495658_0100281 3300046683 Bacteria 1728
159 Ga0495613_0000320 3300046689 Bacteria 43513
160 Ga0495600_0127055 3300046809 Unclassified 1658
161 Ga0495674_0021020 3300047319 Bacteria 6039
162 Ga0495674_0037830 3300047319 Bacteria 4335
163 Ga0495680_0011065 3300047322 Bacteria 8010
164 Ga0495684_0000126 3300047471 Bacteria 56353
165 Ga0495684_0158930 3300047471 Unclassified 1687
166 Ga0496101_0025593 3300048904 Bacteria 4096
167 Ga0496105_0036852 3300048908 Bacteria 4030
168 Ga0496105_0073578 3300048908 Bacteria 2823
169 Ga0496105_0249457 3300048908 Unclassified 1438
170 Ga0496106_0129257 3300048909 Bacteria 1980
171 Ga0496106_0131967 3300048909 Bacteria 1960
172 Ga0496109_0023682 3300048912 Bacteria 5451
173 Ga0496110_0058991 3300048913 Bacteria 3381
174 Ga0496112_0008547 3300048915 Bacteria 9176
175 Ga0496112_0114822 3300048915 Bacteria 2663
176 Ga0496114_0000359 3300048917 Bacteria 33466
177 Ga0496114_0101310 3300048917 Bacteria 2459
178 Ga0496115_0039424 3300048918 Bacteria 3751
179 Ga0501031_0033128 3300049568 Bacteria 3369
180 Ga0501032_0000828 3300049569 Bacteria 25163
181 Ga0501032_0045030 3300049569 Bacteria 2985
182 Ga0501034_0046303 3300049571 Bacteria 4394
183 Ga0501034_0052875 3300049571 Bacteria 4091
184 Ga0501036_0007967 3300049572 Bacteria 8671
185 Ga0501036_0162682 3300049572 Bacteria 1881
186 Ga0501038_0002036 3300049574 Bacteria 18699
187 Ga0501039_0003032 3300049575 Bacteria 12562
188 Ga0501043_0000641 3300049579 Bacteria 30898
189 Ga0501043_0002799 3300049579 Bacteria 14575
190 Ga0501043_0032250 3300049579 Bacteria 4118
191 Ga0501046_0001208 3300049580 Bacteria 25076
192 Ga0501046_0039069 3300049580 Bacteria 3803
193 Ga0501047_0000328 3300049581 Bacteria 54774
194 Ga0501047_0002709 3300049581 Bacteria 16867
195 Ga0501047_0071110 3300049581 Bacteria 3349
196 Ga0501048_0008630 3300049582 Bacteria 7693
197 Ga0501048_0075352 3300049582 Bacteria 2380
198 Ga0501067_0008114 3300049583 Bacteria 5832
199 Ga0501067_0016879 3300049583 Bacteria 4033
200 Ga0501067_0038851 3300049583 Bacteria 2642
201 Ga0501068_0002945 3300049584 Bacteria 9068
202 Ga0501070_0125934 3300049586 Bacteria 2117
203 Ga0501072_0009525 3300049588 Bacteria 7388
204 Ga0501072_0036332 3300049588 Bacteria 3862
205 Ga0501073_0004263 3300049589 Bacteria 10719
206 Ga0501073_0007967 3300049589 Bacteria 7862
207 Ga0501074_0039868 3300049590 Bacteria 3401
208 Ga0501079_0149200 3300049741 Bacteria 1823
209 Ga0501080_0021416 3300049742 Bacteria 5983
210 Ga0501083_0000322 3300049744 Bacteria 30451
211 Ga0501083_0029439 3300049744 Bacteria 3776
212 Ga0501083_0039971 3300049744 Bacteria 3184
213 Ga0501035_0006167 3300049822 Bacteria 11284
214 Ga0501035_0059002 3300049822 Bacteria 3418
215 Ga0501044_0005193 3300049823 Bacteria 14491
216 Ga0501044_0092270 3300049823 Bacteria 3054
217 nmdc:mga05p37_124501_c1 3300050507 Bacteria 3166
218 nmdc:mga05p37_6458_c1 3300050507 Bacteria 12095
219 nmdc:mga05p37_79247_c2 3300050507 Bacteria 3649
220 nmdc:mga08y16_2471_c1 3300050511 Bacteria 18972
221 nmdc:mga0n895_20121_c1 3300050512 Bacteria 6216
222 nmdc:mga0rr50_59523_c1 3300050513 Bacteria 2868
223 nmdc:mga0rr50_8601_c1 3300050513 Bacteria 4617
224 nmdc:mga0a205_54676_c2 3300050515 Bacteria 2589
225 Ga0495601_0033359 3300053077 Bacteria 3208
226 Ga0495595_0087883 3300053084 Unclassified 1488
227 Ga0495619_0004118 3300053085 Bacteria 9293
228 Ga0495619_0008647 3300053085 Bacteria 6443
229 Ga0501084_0040615 3300054114 Bacteria 3892
230 Ga0501082_0012295 3300060353 Bacteria 7356
231 Ga0501082_0113653 3300060353 Bacteria 2344
232 Ga0114129_10098789
233 Ga0065704_10082455
234 Ga0065715_10115341
235 Ga0065715_10125801
236 Ga0065707_10002333
237 Ga0065707_10007519
238 Ga0070690_100021953
239 Ga0070670_100000980
240 Ga0070670_100008252
241 Ga0068869_100067864
242 Ga0068868_100006489
243 Ga0068868_100055664
244 Ga0070687_100044052
245 Ga0070669_100000399
246 Ga0070675_100098044
247 Ga0070671_100103135
248 Ga0070673_100127416
249 Ga0070673_100139425
250 Ga0070688_100081674
251 Ga0070659_100189896
252 Ga0070713_100008525
253 Ga0070711_100000111
254 Ga0070700_100010359
255 Ga0070700_100033308
256 Ga0070678_100085789
257 Ga0070678_100090017
258 Ga0068867_100078669
259 Ga0070672_100007103
260 Ga0070672_100039918
261 Ga0070665_100044381
262 Ga0070664_100000131
263 Ga0068857_100005889
264 Ga0068857_100011022
265 Ga0068859_100080379
266 Ga0068859_100208321
267 Ga0068864_100003459
268 Ga0068864_100107047
269 Ga0068864_100129102
270 Ga0068863_100002265
271 Ga0068858_100004558
272 Ga0068862_100102525
273 Ga0070712_100010213
274 Ga0097621_100007741
275 Ga0068871_100011632
276 Ga0075433_10098585
277 Ga0075434_100002940
278 Ga0075434_100034649
279 Ga0068865_100026809
280 Ga0068865_100087349
281 Ga0097620_100080380
282 Ga0097620_100208317
283 Ga0075435_100005857
284 Ga0075435_100031957
285 Ga0111539_10007864
286 Ga0111539_10052657
287 Ga0105245_10079154
288 Ga0105247_10070083
289 Ga0114129_10084314
290 Ga0114129_10169915
291 Ga0105242_10019208
292 Ga0105242_10073744
293 Ga0105248_10067736
294 Ga0105248_10105855
295 Ga0105248_10173792
296 Ga0105237_10216959
297 Ga0105249_10043800
298 Ga0105246_10071213
299 Ga0157378_10348729
300 Ga0163162_10003173
301 Ga0157375_10007210
302 Ga0163163_10023053
303 Ga0163163_10091070
304 Ga0163163_10097976
305 Ga0163163_10195096
306 Ga0157380_10017978
307 Ga0157377_10031373
308 Ga0157376_10015632
309 Ga0207697_10002478
310 Ga0207682_10041670
311 Ga0207688_10040367
312 Ga0207705_10125575
313 Ga0207695_10112696
314 Ga0207693_10000793
315 Ga0207693_10003156
316 Ga0207663_10004612
317 Ga0207657_10064130
318 Ga0207649_10077419
319 Ga0207681_10024466
320 Ga0207650_10032925
321 Ga0207650_10081333
322 Ga0207659_10040455
323 Ga0207659_10074993
324 Ga0207644_10117489
325 Ga0207670_10041966
326 Ga0207670_10093454
327 Ga0207669_10077434
328 Ga0207704_10009914
329 Ga0207691_10011393
330 Ga0207691_10047088
331 Ga0207691_10047125
332 Ga0207711_10020613
333 Ga0207711_10063065
334 Ga0207711_10065149
335 Ga0207711_10092274
336 Ga0207689_10017142
337 Ga0207679_10011342
338 Ga0207679_10016062
339 Ga0207679_10061397
340 Ga0207651_10005703
341 Ga0207651_10023204
342 Ga0207651_10037870
343 Ga0207712_10041146
344 Ga0207658_10120658
345 Ga0207677_10035930
346 Ga0207703_10007946
347 Ga0207703_10074031
348 Ga0207708_10012016
349 Ga0207641_10013060
350 Ga0207641_10027723
351 Ga0207641_10029727
352 Ga0207648_10002371
353 Ga0207648_10063216
354 Ga0207674_10015071
355 Ga0207674_10055623
356 Ga0207683_10060507
357 Ga0207683_10132985
358 Ga0207428_10009483
359 Ga0268265_10030598
360 Ga0316578_10079308
361 Ga0307409_100090686
362 Ga0307416_100164883
363 Ga0316574_0056869
364 Ga0373937_0028061
365 Ga0373937_0223771
366 Ga0466963_0025433
367 Ga0451576_0014586
368 Ga0466967_0166784
369 Ga0495592_0068035
370 Ga0495603_0037490
371 Ga0495629_0044821
372 Ga0495651_0004725
373 Ga0495582_0003346
374 Ga0495662_0027804
375 Ga0495608_0005888
376 Ga0495608_0079247
377 Ga0495618_0029492
378 Ga0495618_0038145
379 Ga0495630_0025110
380 Ga0495630_0125409
381 Ga0495586_0084521
382 Ga0495621_0052518
383 Ga0495667_0000134
384 Ga0495667_0003475
385 Ga0495634_0049195
386 Ga0495635_0054101
387 Ga0495657_0002116
388 Ga0495658_0000515
389 Ga0495658_0100281
390 Ga0495613_0000320
391 Ga0495600_0127055
392 Ga0495674_0021020
393 Ga0495674_0037830
394 Ga0495680_0011065
395 Ga0495684_0000126
396 Ga0495684_0158930
397 Ga0496101_0025593
398 Ga0496105_0036852
399 Ga0496105_0073578
400 Ga0496105_0249457
401 Ga0496106_0129257
402 Ga0496106_0131967
403 Ga0496109_0023682
404 Ga0496110_0058991
405 Ga0496112_0008547
406 Ga0496112_0114822
407 Ga0496114_0000359
408 Ga0496114_0101310
409 Ga0496115_0039424
410 Ga0501031_0033128
411 Ga0501032_0000828
412 Ga0501032_0045030
413 Ga0501034_0046303
414 Ga0501034_0052875
415 Ga0501036_0007967
416 Ga0501036_0162682
417 Ga0501038_0002036
418 Ga0501039_0003032
419 Ga0501043_0000641
420 Ga0501043_0002799
421 Ga0501043_0032250
422 Ga0501046_0001208
423 Ga0501046_0039069
424 Ga0501047_0000328
425 Ga0501047_0002709
426 Ga0501047_0071110
427 Ga0501048_0008630
428 Ga0501048_0075352
429 Ga0501067_0008114
430 Ga0501067_0016879
431 Ga0501067_0038851
432 Ga0501068_0002945
433 Ga0501070_0125934
434 Ga0501072_0009525
435 Ga0501072_0036332
436 Ga0501073_0004263
437 Ga0501073_0007967
438 Ga0501074_0039868
439 Ga0501079_0149200
440 Ga0501080_0021416
441 Ga0501083_0000322
442 Ga0501083_0029439
443 Ga0501083_0039971
444 Ga0501035_0006167
445 Ga0501035_0059002
446 Ga0501044_0005193
447 Ga0501044_0092270
448 nmdc:mga05p37_124501_c1
449 nmdc:mga05p37_6458_c1
450 nmdc:mga05p37_79247_c2
451 nmdc:mga08y16_2471_c1
452 nmdc:mga0n895_20121_c1
453 nmdc:mga0rr50_59523_c1
454 nmdc:mga0rr50_8601_c1
455 nmdc:mga0a205_54676_c2
456 Ga0495601_0033359
457 Ga0495595_0087883
458 Ga0495619_0004118
459 Ga0495619_0008647
460 Ga0501084_0040615
461 Ga0501082_0012295
462 Ga0501082_0113653

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00282

Pyridoxal_deC

Pyridoxal-dependent decarboxylase conserved domain

68

423

0.92

PF00266

Aminotran_5

Aminotransferase class-V

117

486

0.8

PF01212

Beta_elim_lyase

Beta-eliminating lyase

153

513

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
5o5c-assembly3.cif.gz_E the crystal structure of dfoj, the desferrioxamine biosynthetic pathway lysine decarboxylase from the fire blight disease pathogen erwinia amylovora 0.9041 61 429
6enz-assembly1.cif.gz_B crystal structure of mouse gadl1 0.9013 59 425
5o5c-assembly1.cif.gz_A the crystal structure of dfoj, the desferrioxamine biosynthetic pathway lysine decarboxylase from the fire blight disease pathogen erwinia amylovora 0.9012 59 425
6zek-assembly1.cif.gz_C crystal structure of mouse csad 0.9008 57 424
5o5c-assembly2.cif.gz_D the crystal structure of dfoj, the desferrioxamine biosynthetic pathway lysine decarboxylase from the fire blight disease pathogen erwinia amylovora 0.9007 61 429
ID Description Score Start End Superfamily
5o5cE02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9291 306 429 3.90.1150.10
4obuA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9247 57 275 3.40.640.10
4obuA01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1; 0.9066 299 434 3.90.1150.170
2jisA01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1; 0.9056 299 424 3.90.1150.170
af_Q9Y600_363_489_3.90.1150.170 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1; 0.8998 300 422 3.90.1150.170
ID Description Score Start End GO Terms
AF-A0A6N9XVQ6-F1-model_v4 deleted 0.9634 126 217
AF-A0A1I8C924-F1-model_v4 Glutamate decarboxylase 0.9483 123 240 GO:0004351
GO:0005737
GO:0009449
GO:0030170
AF-A0A6N9XVQ6-F1-model_v4 deleted 0.9435 126 217
AF-A0A2V7JE42-F1-model_v4 Aspartate aminotransferase family protein 0.9434 81 433 GO:0008483
GO:0016831
GO:0019752
GO:0030170
AF-C3Y6S3-F1-model_v4 Aromatic-L-amino-acid decarboxylase 0.9428 123 245 GO:0016831
GO:0019752
GO:0030170

Map