F343969

General Info

Members Datasets Scaffolds Average Seq Length
231 164 216 410

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10177867|Ga0111539_101778672
Length 470
Sequence MSASAPRFFVPRFLFFVRCHFVDSLRTQFRDATVGLNRNSGFVEILLRAIRRCTTVRLNMGMNLVTKLAILADAAKYDASCASSGTTRRNSRGGGIGSTTGTGICHSYTPDGRCVSLLKILLTNFCIYDCLYCINRRSSTVQRARFTPEEVVQLTLDFYRRNYIEGLFLSSGIIRDPDYTMEQVVCVARRLRVDHQFRGYIHLKTIPEAAPELIAEAGKWADRLSINVELPTQNELENLAPEKDLARIETSMSKIKARIEEAKAERRKTSKAPVFAPAGQSTQMIVGATPANDATILERASSLYQKQHLRRVYYSAFSPIPDASSKLPLTAPPLVREHRLYQADWLMRFYGFHVAELTTRKEPNLPLNVDPKLAWALRNRDKFPIDLNKAPREMLLRIPGLGVRNVDRIICIRRWHSIRLDDLTRLRVPLSKAMPFIIVTDHTPRLLERETVISRFVKTQQQRELFQIAA

Samples

Sample ID Description Type Environment
1 2593339238 Luteibacter sp. UNCMF366Tsu5.1 Isolate Unclassified
2 2643221547 Pseudolabrys sp. Root1462 Isolate Unclassified
3 2818991440 Luteibacter yeojuensis 583 Isolate Unclassified
4 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
5 2842694124 Methylopila sp. R-72369 Isolate Unclassified
6 2842914999 Luteibacter sp. R-72151 Isolate Unclassified
7 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
8 2884338543 Luteibacter pinisoli MAH-14 Isolate Rhizosphere
9 2904463128 Luteibacter yeojuensis 3191 Isolate Unclassified
10 2919085039 Luteibacter sp. 1214 Isolate Unclassified
11 2919404418 Luteibacter sp. 3190 Isolate Unclassified
12 2919513703 Luteimonas sp. 3794 Isolate Unclassified
13 2919675420 Luteimonas terrae 4099 Isolate Unclassified
14 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere
15 2941471342 Luteibacter sp. 621 Isolate Unclassified
16 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
17 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
18 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
19 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
20 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
21 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
22 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
23 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
24 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
25 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
26 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
27 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
28 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
29 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
30 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
31 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
32 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
33 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
36 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
43 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
44 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
65 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
67 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
68 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
93 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
94 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
95 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
96 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
97 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
98 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
99 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
100 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
101 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
102 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
103 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
104 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
105 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
106 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
107 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
108 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
109 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
110 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
111 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
112 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
113 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
114 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
115 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
116 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
117 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
118 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
119 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
120 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
121 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
122 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
123 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
124 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
125 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
126 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
127 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
128 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
129 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
130 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
131 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
132 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
133 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
134 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
135 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
136 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
137 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
138 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
139 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
140 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
141 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
142 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
143 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
144 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
145 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
151 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
152 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
155 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
156 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
157 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
158 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
159 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
160 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
161 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
162 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
163 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
164 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.07
Metatranscriptomes 0.43
Isolates 6.49

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.66
Nodule 0
Rhizoplane 3.9
Rhizosphere 73.59
Stem 0
Stem Tuber 0
Unclassified 13.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1000276 3300001904 Bacteria 9376
2 Ga0006562J51391_1035851 3300003578 Bacteria 3316
3 Ga0065165_1000887 3300005262 Bacteria 38644
4 Ga0065712_10003265 3300005290 Bacteria 4026
5 Ga0070658_10001151 3300005327 Bacteria 22556
6 Ga0070658_10002516 3300005327 Bacteria 15300
7 Ga0070658_10008617 3300005327 Bacteria 8199
8 Ga0070658_10076880 3300005327 Bacteria 2738
9 Ga0070670_100111661 3300005331 Bacteria 2356
10 Ga0070670_100112393 3300005331 Bacteria 2347
11 Ga0070677_10004076 3300005333 Bacteria 4742
12 Ga0070666_10000099 3300005335 Bacteria 59763
13 Ga0070666_10180063 3300005335 Bacteria 1482
14 Ga0070687_100002350 3300005343 Bacteria 7050
15 Ga0070661_100037976 3300005344 Bacteria 3505
16 Ga0070661_100115367 3300005344 Bacteria 2008
17 Ga0070669_100081226 3300005353 Bacteria 2414
18 Ga0070675_100007775 3300005354 Bacteria 8302
19 Ga0070675_100125854 3300005354 Bacteria 2180
20 Ga0070671_100030255 3300005355 Bacteria 4468
21 Ga0070671_100062642 3300005355 Bacteria 3097
22 Ga0070674_100034761 3300005356 Bacteria 3369
23 Ga0070673_100014221 3300005364 Bacteria 5533
24 Ga0070673_100078340 3300005364 Bacteria 2673
25 Ga0070667_100006292 3300005367 Bacteria 9867
26 Ga0070667_100006387 3300005367 Bacteria 9795
27 Ga0070667_100112242 3300005367 Bacteria 2364
28 Ga0070678_100047867 3300005456 Bacteria 3075
29 Ga0070678_100079751 3300005456 Bacteria 2477
30 Ga0068867_100076426 3300005459 Bacteria 2514
31 Ga0068853_100041493 3300005539 Bacteria 3931
32 Ga0070672_100007590 3300005543 Bacteria 7373
33 Ga0070672_100070747 3300005543 Bacteria 2773
34 Ga0070686_100115780 3300005544 Bacteria 1833
35 Ga0070665_100014603 3300005548 Bacteria 7881
36 Ga0070665_100147992 3300005548 Bacteria 2351
37 Ga0068855_100002915 3300005563 Bacteria 20937
38 Ga0068859_100104970 3300005617 Bacteria 2885
39 Ga0068866_10094214 3300005718 Bacteria 1638
40 Ga0081539_10001391 3300005985 Bacteria 41667
41 Ga0075365_10129056 3300006038 Bacteria 1749
42 Ga0075369_10020161 3300006186 Bacteria 2729
43 Ga0075366_10043145 3300006195 Bacteria 2671
44 Ga0075428_100026675 3300006844 Bacteria 6397
45 Ga0075430_100010919 3300006846 Bacteria 7694
46 Ga0075430_100104336 3300006846 Bacteria 2366
47 Ga0075430_100178686 3300006846 Bacteria 1765
48 Ga0075431_100033437 3300006847 Bacteria 5300
49 Ga0068865_100113657 3300006881 Bacteria 2001
50 Ga0097620_100104959 3300006931 Bacteria 2885
51 Ga0111539_10177867 3300009094 Bacteria 2485
52 Ga0105243_10019661 3300009148 Bacteria 5121
53 Ga0105238_10012546 3300009551 Bacteria 8554
54 Ga0105239_10467741 3300010375 Bacteria 1431
55 Ga0157370_10002626 3300013104 Bacteria 21604
56 Ga0157370_10041064 3300013104 Bacteria 4465
57 Ga0157369_10011389 3300013105 Bacteria 10098
58 Ga0157374_10062714 3300013296 Bacteria 3485
59 Ga0163162_10016164 3300013306 Bacteria 7296
60 Ga0163162_10223846 3300013306 Bacteria 2011
61 Ga0157372_10144340 3300013307 Bacteria 2745
62 Ga0157375_10006022 3300013308 Bacteria 10577
63 Ga0157375_10430288 3300013308 Bacteria 1486
64 Ga0157380_10059320 3300014326 Bacteria 3053
65 Ga0157380_10415000 3300014326 Bacteria 1282
66 Ga0182005_1000015 3300015265 Bacteria 387565
67 Ga0163161_10002917 3300017792 Bacteria 12110
68 Ga0209674_101812 3300025226 Bacteria 5118
69 Ga0209437_100894 3300025233 Bacteria 12005
70 Ga0209148_1000912 3300025254 Bacteria 19949
71 Ga0209129_1000331 3300025258 Bacteria 41001
72 Ga0209758_1000430 3300025297 Bacteria 71132
73 Ga0209758_1030947 3300025297 Bacteria 2205
74 Ga0209050_1000495 3300025298 Bacteria 67531
75 Ga0209051_1008798 3300025303 Bacteria 5293
76 Ga0207682_10001899 3300025893 Bacteria 9485
77 Ga0207680_10000001 3300025903 Bacteria 1091453
78 Ga0207680_10050229 3300025903 Bacteria 2487
79 Ga0207647_10000130 3300025904 Bacteria 58985
80 Ga0207705_10007181 3300025909 Bacteria 8206
81 Ga0207705_10046524 3300025909 Bacteria 3118
82 Ga0207705_10115942 3300025909 Bacteria 1983
83 Ga0207662_10004664 3300025918 Bacteria 7233
84 Ga0207649_10034632 3300025920 Bacteria 3028
85 Ga0207694_10004264 3300025924 Bacteria 11193
86 Ga0207694_10059575 3300025924 Bacteria 2970
87 Ga0207650_10049773 3300025925 Bacteria 3096
88 Ga0207659_10006659 3300025926 Bacteria 7099
89 Ga0207659_10146692 3300025926 Bacteria 1838
90 Ga0207644_10032115 3300025931 Bacteria 3661
91 Ga0207669_10046929 3300025937 Bacteria 2555
92 Ga0207704_10051409 3300025938 Bacteria 2492
93 Ga0207691_10006907 3300025940 Bacteria 10948
94 Ga0207691_10011988 3300025940 Bacteria 8315
95 Ga0207691_10014600 3300025940 Bacteria 7486
96 Ga0207667_10002973 3300025949 Bacteria 21066
97 Ga0207651_10021541 3300025960 Bacteria 3920
98 Ga0207651_10180142 3300025960 Bacteria 1676
99 Ga0207658_10054029 3300025986 Bacteria 2970
100 Ga0207658_10076591 3300025986 Bacteria 2549
101 Ga0207658_10265147 3300025986 Bacteria 1466
102 Ga0207678_10014659 3300026067 Bacteria 6898
103 Ga0207678_10119043 3300026067 Bacteria 2253
104 Ga0207648_10063028 3300026089 Bacteria 3232
105 Ga0207648_10109386 3300026089 Bacteria 2426
106 Ga0207674_10044244 3300026116 Bacteria 4585
107 Ga0207683_10003637 3300026121 Bacteria 13413
108 Ga0207683_10040289 3300026121 Bacteria 4075
109 Ga0268266_10000148 3300028379 Bacteria 135001
110 Ga0268266_10004476 3300028379 Bacteria 13361
111 Ga0268266_10027069 3300028379 Bacteria 4879
112 Ga0268266_10118643 3300028379 Bacteria 2352
113 Ga0268264_10026228 3300028381 Bacteria 4760
114 Ga0307509_10153129 3300031507 Bacteria 2217
115 Ga0307405_10006281 3300031731 Bacteria 5831
116 Ga0307413_10107173 3300031824 Bacteria 1861
117 Ga0307410_10129453 3300031852 Bacteria 1852
118 Ga0307406_10009597 3300031901 Bacteria 5437
119 Ga0307406_10086013 3300031901 Bacteria 2104
120 Ga0307406_10134926 3300031901 Bacteria 1738
121 Ga0307407_10006990 3300031903 Bacteria 5073
122 Ga0307407_10051170 3300031903 Bacteria 2367
123 Ga0307412_10027809 3300031911 Bacteria 3532
124 Ga0307412_10028891 3300031911 Bacteria 3476
125 Ga0307409_100040624 3300031995 Bacteria 3465
126 Ga0307416_100017575 3300032002 Bacteria 5009
127 Ga0436364_0198245 3300037853 Bacteria 2491
128 Ga0436365_0100706 3300039437 Bacteria 1814
129 Ga0436360_0779171 3300039438 Bacteria 6619
130 Ga0436363_0170873 3300039450 Bacteria 2822
131 Ga0439439_0018283 3300041406 Bacteria 1731
132 Ga0451791_0277231 3300041451 Bacteria 3220
133 Ga0451802_1718205 3300041460 Bacteria 2677
134 Ga0451807_0439523 3300041486 Bacteria 3017
135 Ga0451837_0544637 3300041494 Bacteria 5738
136 Ga0450908_000141 3300042184 Bacteria 14773
137 Ga0451577_0000066 3300042876 Bacteria 257650
138 Ga0451577_0002113 3300042876 Bacteria 24476
139 Ga0451577_0023985 3300042876 Bacteria 5555
140 Ga0451577_0096501 3300042876 Bacteria 2639
141 Ga0451577_0132677 3300042876 Bacteria 2235
142 Ga0439440_0019930 3300042993 Bacteria 1501
143 Ga0466982_0000363 3300044672 Bacteria 12817
144 Ga0453683_0000010 3300044673 Bacteria 470890
145 Ga0453683_0000174 3300044673 Bacteria 89378
146 Ga0453683_0023337 3300044673 Bacteria 3943
147 Ga0453683_0049512 3300044673 Bacteria 2634
148 Ga0453683_0068292 3300044673 Bacteria 2222
149 Ga0466963_0003406 3300044694 Bacteria 9099
150 Ga0453684_0000167 3300044712 Bacteria 290200
151 Ga0453684_0000199 3300044712 Bacteria 264155
152 Ga0453684_0000206 3300044712 Bacteria 257650
153 Ga0453684_0000527 3300044712 Bacteria 146072
154 Ga0453684_0050484 3300044712 Bacteria 5471
155 Ga0466968_0001582 3300044735 Bacteria 8202
156 Ga0451576_0000072 3300045051 Bacteria 257650
157 Ga0451576_0000211 3300045051 Bacteria 146199
158 Ga0451576_0115120 3300045051 Bacteria 2799
159 Ga0451576_0115821 3300045051 Bacteria 2790
160 Ga0466967_0027137 3300045976 Bacteria 4759
161 Ga0495650_0029838 3300046471 Bacteria 2480
162 Ga0495584_0003052 3300046491 Bacteria 9299
163 Ga0495585_0001595 3300046492 Bacteria 17521
164 Ga0495607_0001268 3300046501 Bacteria 22571
165 Ga0495607_0014069 3300046501 Bacteria 5222
166 Ga0495606_0003479 3300046507 Bacteria 16682
167 Ga0495610_0006040 3300046512 Bacteria 8455
168 Ga0495616_0000831 3300046513 Bacteria 22547
169 Ga0495632_0000005 3300046519 Bacteria 362872
170 Ga0495632_0003976 3300046519 Bacteria 10244
171 Ga0495621_0027714 3300046539 Bacteria 1920
172 Ga0495656_0004509 3300046615 Bacteria 4770
173 Ga0495683_0005096 3300047323 Bacteria 7339
174 Ga0495686_0000050 3300047472 Bacteria 269010
175 Ga0495686_0038330 3300047472 Bacteria 3065
176 Ga0496101_0002985 3300048904 Bacteria 10421
177 Ga0496106_0004672 3300048909 Bacteria 10156
178 Ga0496108_0037073 3300048911 Bacteria 4060
179 Ga0496108_0244227 3300048911 Bacteria 1562
180 Ga0496110_0160192 3300048913 Bacteria 2039
181 Ga0496112_0014369 3300048915 Bacteria 7340
182 Ga0496116_0077698 3300048919 Bacteria 2073
183 Ga0496117_0090429 3300048920 Bacteria 1972
184 Ga0496118_0003339 3300048921 Bacteria 20305
185 Ga0496118_0009035 3300048921 Bacteria 10158
186 Ga0496121_0001206 3300048924 Bacteria 45212
187 Ga0496121_0010948 3300048924 Bacteria 10131
188 Ga0496122_0011038 3300048925 Bacteria 9222
189 Ga0496122_0021458 3300048925 Bacteria 5782
190 Ga0496123_0035865 3300048926 Bacteria 3527
191 Ga0496124_0013382 3300048927 Bacteria 8011
192 Ga0496125_0041321 3300048928 Bacteria 3944
193 Ga0496125_0055206 3300048928 Bacteria 3239
194 Ga0501033_0009147 3300049570 Bacteria 7637
195 Ga0501034_0023832 3300049571 Bacteria 6232
196 Ga0501037_0040554 3300049573 Bacteria 3426
197 Ga0501043_0004057 3300049579 Bacteria 11972
198 Ga0501043_0009282 3300049579 Bacteria 7730
199 Ga0501047_0020864 3300049581 Bacteria 6293
200 Ga0501081_0020193 3300049743 Bacteria 4440
201 Ga0501083_0023806 3300049744 Bacteria 4246
202 Ga0501035_0017105 3300049822 Bacteria 6681
203 Ga0501044_0030289 3300049823 Bacteria 5705
204 nmdc:mga00v17_103117_c1 3300050491 Bacteria 1803
205 nmdc:mga00v17_64013_c1 3300050491 Bacteria 2266
206 nmdc:mga07m45_128797_c1 3300050496 Bacteria 1464
207 nmdc:mga0qj67_53886_c1 3300050509 Bacteria 3185
208 nmdc:mga0qj67_59030_c1 3300050509 Bacteria 3042
209 nmdc:mga06r32_41695_c1 3300050510 Bacteria 4362
210 nmdc:mga08y16_26866_c1 3300050511 Bacteria 6066
211 Ga0500593_000029 3300053117 Bacteria 51244
212 Ga0500559_0002112 3300053136 Bacteria 10582
213 Ga0500568_0000004 3300053139 Bacteria 621666
214 Ga0500603_000972 3300053150 Bacteria 6783
215 Ga0500637_0000159 3300053178 Bacteria 24810
216 Ga0501082_0000447 3300060353 Bacteria 36502

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048919 Ga0496116_0077698 Ga0496116_0077698_12_1064 350
2 3300050510 nmdc:mga06r32_41695_c1 nmdc:mga06r32_41695_c1_2598_3833 379
3 3300050491 nmdc:mga00v17_64013_c1 nmdc:mga00v17_64013_c1_954_2231 383
4 3300006846 Ga0075430_100010919 Ga0075430_1000109192 387
5 3300006847 Ga0075431_100033437 Ga0075431_1000334372 387
6 3300006846 Ga0075430_100178686 Ga0075430_1001786861 388
7 3300050509 nmdc:mga0qj67_59030_c1 nmdc:mga0qj67_59030_c1_917_2173 388
8 3300006038 Ga0075365_10129056 Ga0075365_101290562 390
9 3300050491 nmdc:mga00v17_103117_c1 nmdc:mga00v17_103117_c1_127_1425 390
10 3300006844 Ga0075428_100026675 Ga0075428_1000266753 391
11 3300039438 Ga0436360_0779171 Ga0436360_0779171_5152_6378 392
12 3300041494 Ga0451837_0544637 Ga0451837_0544637_647_1870 393
13 3300005364 Ga0070673_100078340 Ga0070673_1000783403 397
14 3300005456 Ga0070678_100079751 Ga0070678_1000797511 397
15 3300025924 Ga0207694_10059575 Ga0207694_100595752 397
16 3300025925 Ga0207650_10049773 Ga0207650_100497732 397
17 3300025940 Ga0207691_10011988 Ga0207691_100119884 397
18 3300026089 Ga0207648_10063028 Ga0207648_100630283 397
19 3300026121 Ga0207683_10040289 Ga0207683_100402892 397
20 3300005327 Ga0070658_10002516 Ga0070658_100025162 398
21 3300025909 Ga0207705_10046524 Ga0207705_100465241 398
22 iso_pu_bacteria 2842694124 2842694922 398
23 iso_pu_bacteria 2939669807 2939673695 398
24 3300005335 Ga0070666_10180063 Ga0070666_101800631 400
25 3300005354 Ga0070675_100007775 Ga0070675_1000077756 400
26 3300005355 Ga0070671_100062642 Ga0070671_1000626423 400
27 3300005364 Ga0070673_100014221 Ga0070673_1000142212 400
28 3300005367 Ga0070667_100006292 Ga0070667_1000062928 400
29 3300005543 Ga0070672_100007590 Ga0070672_1000075907 400
30 3300005548 Ga0070665_100014603 Ga0070665_1000146034 400
31 3300013306 Ga0163162_10223846 Ga0163162_102238463 400
32 3300013308 Ga0157375_10006022 Ga0157375_100060226 400
33 3300025903 Ga0207680_10050229 Ga0207680_100502292 400
34 3300025926 Ga0207659_10006659 Ga0207659_100066594 400
35 3300025931 Ga0207644_10032115 Ga0207644_100321153 400
36 3300025940 Ga0207691_10014600 Ga0207691_100146006 400
37 3300025960 Ga0207651_10021541 Ga0207651_100215413 400
38 3300025986 Ga0207658_10054029 Ga0207658_100540292 400
39 3300028379 Ga0268266_10004476 Ga0268266_100044764 400
40 3300048911 Ga0496108_0244227 Ga0496108_0244227_215_1441 400
41 iso_pu_bacteria 2593339238 2595448979 400
42 iso_pu_bacteria 2818991440 2819565113 400
43 iso_pu_bacteria 2842914999 2842917029 400
44 iso_pu_bacteria 2884338543 2884342224 400
45 iso_pu_bacteria 2904463128 2904465359 400
46 iso_pu_bacteria 2919085039 2919087895 400
47 iso_pu_bacteria 2919513703 2919515979 400
48 iso_pu_bacteria 2919675420 2919677791 400
49 3300005290 Ga0065712_10003265 Ga0065712_100032653 401
50 3300005327 Ga0070658_10001151 Ga0070658_100011516 401
51 3300005327 Ga0070658_10076880 Ga0070658_100768803 401
52 3300005354 Ga0070675_100125854 Ga0070675_1001258542 401
53 3300005563 Ga0068855_100002915 Ga0068855_1000029157 401
54 3300005985 Ga0081539_10001391 Ga0081539_1000139137 401
55 3300006195 Ga0075366_10043145 Ga0075366_100431452 401
56 3300009094 Ga0111539_10177867 Ga0111539_101778672 401
57 3300013104 Ga0157370_10002626 Ga0157370_100026266 401
58 3300013296 Ga0157374_10062714 Ga0157374_100627142 401
59 3300025298 Ga0209050_1000495 Ga0209050_100049530 401
60 3300025909 Ga0207705_10115942 Ga0207705_101159422 401
61 3300025949 Ga0207667_10002973 Ga0207667_1000297320 401
62 3300026067 Ga0207678_10014659 Ga0207678_100146595 401
63 3300028379 Ga0268266_10027069 Ga0268266_100270692 401
64 3300048911 Ga0496108_0037073 Ga0496108_0037073_34_1263 401
65 3300048915 Ga0496112_0014369 Ga0496112_0014369_3605_4834 401
66 3300049743 Ga0501081_0020193 Ga0501081_0020193_271_1506 401
67 3300050511 nmdc:mga08y16_26866_c1 nmdc:mga08y16_26866_c1_487_1707 401
68 3300053136 Ga0500559_0002112 Ga0500559_0002112_8131_9360 401
69 iso_pu_bacteria 2844533157 2844539044 401
70 3300005331 Ga0070670_100112393 Ga0070670_1001123931 402
71 3300006846 Ga0075430_100104336 Ga0075430_1001043362 402
72 3300025960 Ga0207651_10180142 Ga0207651_101801421 402
73 3300025986 Ga0207658_10265147 Ga0207658_102651471 402
74 3300031901 Ga0307406_10086013 Ga0307406_100860132 402
75 3300041406 Ga0439439_0018283 Ga0439439_0018283_455_1717 402
76 3300042993 Ga0439440_0019930 Ga0439440_0019930_217_1440 402
77 3300049823 Ga0501044_0030289 Ga0501044_0030289_2031_3260 402
78 3300050509 nmdc:mga0qj67_53886_c1 nmdc:mga0qj67_53886_c1_173_1453 402
79 iso_pu_bacteria 2919404418 2919407897 402
80 iso_pu_bacteria 2941471342 2941474680 402
81 3300005331 Ga0070670_100111661 Ga0070670_1001116612 403
82 3300005333 Ga0070677_10004076 Ga0070677_100040763 403
83 3300005343 Ga0070687_100002350 Ga0070687_1000023508 403
84 3300005353 Ga0070669_100081226 Ga0070669_1000812262 403
85 3300005355 Ga0070671_100030255 Ga0070671_1000302553 403
86 3300005356 Ga0070674_100034761 Ga0070674_1000347613 403
87 3300005367 Ga0070667_100112242 Ga0070667_1001122422 403
88 3300005456 Ga0070678_100047867 Ga0070678_1000478672 403
89 3300005459 Ga0068867_100076426 Ga0068867_1000764262 403
90 3300005543 Ga0070672_100070747 Ga0070672_1000707472 403
91 3300005544 Ga0070686_100115780 Ga0070686_1001157802 403
92 3300005617 Ga0068859_100104970 Ga0068859_1001049702 403
93 3300005718 Ga0068866_10094214 Ga0068866_100942142 403
94 3300006881 Ga0068865_100113657 Ga0068865_1001136572 403
95 3300006931 Ga0097620_100104959 Ga0097620_1001049592 403
96 3300009148 Ga0105243_10019661 Ga0105243_100196614 403
97 3300013308 Ga0157375_10430288 Ga0157375_104302882 403
98 3300014326 Ga0157380_10059320 Ga0157380_100593202 403
99 3300025893 Ga0207682_10001899 Ga0207682_100018994 403
100 3300025918 Ga0207662_10004664 Ga0207662_100046643 403
101 3300025926 Ga0207659_10146692 Ga0207659_101466922 403
102 3300025937 Ga0207669_10046929 Ga0207669_100469292 403
103 3300025938 Ga0207704_10051409 Ga0207704_100514092 403
104 3300025940 Ga0207691_10006907 Ga0207691_100069075 403
105 3300025986 Ga0207658_10076591 Ga0207658_100765912 403
106 3300026089 Ga0207648_10109386 Ga0207648_101093862 403
107 3300026116 Ga0207674_10044244 Ga0207674_100442442 403
108 3300026121 Ga0207683_10003637 Ga0207683_100036373 403
109 3300031507 Ga0307509_10153129 Ga0307509_101531292 403
110 3300031731 Ga0307405_10006281 Ga0307405_100062816 403
111 3300031824 Ga0307413_10107173 Ga0307413_101071732 403
112 3300031852 Ga0307410_10129453 Ga0307410_101294532 403
113 3300031901 Ga0307406_10009597 Ga0307406_100095975 403
114 3300031901 Ga0307406_10134926 Ga0307406_101349262 403
115 3300031903 Ga0307407_10006990 Ga0307407_100069902 403
116 3300031903 Ga0307407_10051170 Ga0307407_100511702 403
117 3300031911 Ga0307412_10027809 Ga0307412_100278092 403
118 3300031911 Ga0307412_10028891 Ga0307412_100288912 403
119 3300031995 Ga0307409_100040624 Ga0307409_1000406243 403
120 3300032002 Ga0307416_100017575 Ga0307416_1000175755 403
121 3300037853 Ga0436364_0198245 Ga0436364_0198245_239_1498 403
122 3300042876 Ga0451577_0000066 Ga0451577_0000066_73838_75118 403
123 3300042876 Ga0451577_0002113 Ga0451577_0002113_4835_6115 403
124 3300042876 Ga0451577_0023985 Ga0451577_0023985_393_1673 403
125 3300042876 Ga0451577_0096501 Ga0451577_0096501_756_2036 403
126 3300042876 Ga0451577_0132677 Ga0451577_0132677_102_1418 403
127 3300044673 Ga0453683_0000010 Ga0453683_0000010_163926_165206 403
128 3300044673 Ga0453683_0000174 Ga0453683_0000174_14273_15553 403
129 3300044673 Ga0453683_0023337 Ga0453683_0023337_2355_3635 403
130 3300044673 Ga0453683_0049512 Ga0453683_0049512_1263_2543 403
131 3300044673 Ga0453683_0068292 Ga0453683_0068292_96_1376 403
132 3300044712 Ga0453684_0000167 Ga0453684_0000167_69268_70548 403
133 3300044712 Ga0453684_0000199 Ga0453684_0000199_222514_223794 403
134 3300044712 Ga0453684_0000206 Ga0453684_0000206_182533_183813 403
135 3300044712 Ga0453684_0000527 Ga0453684_0000527_4711_5991 403
136 3300044712 Ga0453684_0050484 Ga0453684_0050484_145_1425 403
137 3300045051 Ga0451576_0000072 Ga0451576_0000072_182533_183813 403
138 3300045051 Ga0451576_0000211 Ga0451576_0000211_4711_5991 403
139 3300045051 Ga0451576_0115120 Ga0451576_0115120_1216_2496 403
140 3300045051 Ga0451576_0115821 Ga0451576_0115821_678_1958 403
141 3300046539 Ga0495621_0027714 Ga0495621_0027714_308_1522 403
142 3300046615 Ga0495656_0004509 Ga0495656_0004509_2311_3525 403
143 3300049744 Ga0501083_0023806 Ga0501083_0023806_868_2082 403
144 3300053150 Ga0500603_000972 Ga0500603_000972_4053_5291 403
145 3300053178 Ga0500637_0000159 Ga0500637_0000159_1062_2300 403
146 3300060353 Ga0501082_0000447 Ga0501082_0000447_3186_4400 403
147 3300005262 Ga0065165_1000887 Ga0065165_100088728 404
148 3300005327 Ga0070658_10008617 Ga0070658_100086176 404
149 3300005335 Ga0070666_10000099 Ga0070666_1000009919 404
150 3300005344 Ga0070661_100037976 Ga0070661_1000379762 404
151 3300005344 Ga0070661_100115367 Ga0070661_1001153671 404
152 3300005367 Ga0070667_100006387 Ga0070667_10000638711 404
153 3300005539 Ga0068853_100041493 Ga0068853_1000414932 404
154 3300009551 Ga0105238_10012546 Ga0105238_100125462 404
155 3300010375 Ga0105239_10467741 Ga0105239_104677411 404
156 3300013104 Ga0157370_10041064 Ga0157370_100410642 404
157 3300013306 Ga0163162_10016164 Ga0163162_100161644 404
158 3300015265 Ga0182005_1000015 Ga0182005_10000152 404
159 3300017792 Ga0163161_10002917 Ga0163161_100029179 404
160 3300025226 Ga0209674_101812 Ga0209674_1018122 404
161 3300025233 Ga0209437_100894 Ga0209437_1008946 404
162 3300025254 Ga0209148_1000912 Ga0209148_100091215 404
163 3300025297 Ga0209758_1000430 Ga0209758_100043045 404
164 3300025297 Ga0209758_1030947 Ga0209758_10309472 404
165 3300025903 Ga0207680_10000001 Ga0207680_10000001728 404
166 3300025909 Ga0207705_10007181 Ga0207705_100071815 404
167 3300025920 Ga0207649_10034632 Ga0207649_100346322 404
168 3300025924 Ga0207694_10004264 Ga0207694_100042645 404
169 3300026067 Ga0207678_10119043 Ga0207678_101190432 404
170 3300028379 Ga0268266_10000148 Ga0268266_1000014872 404
171 3300028381 Ga0268264_10026228 Ga0268264_100262285 404
172 3300039450 Ga0436363_0170873 Ga0436363_0170873_1448_2674 404
173 3300041486 Ga0451807_0439523 Ga0451807_0439523_1166_2383 404
174 3300042184 Ga0450908_000141 Ga0450908_000141_13258_14472 404
175 3300044672 Ga0466982_0000363 Ga0466982_0000363_4091_5317 404
176 3300044735 Ga0466968_0001582 Ga0466968_0001582_3474_4688 404
177 3300046471 Ga0495650_0029838 Ga0495650_0029838_41_1255 404
178 3300046491 Ga0495584_0003052 Ga0495584_0003052_7662_8876 404
179 3300046492 Ga0495585_0001595 Ga0495585_0001595_11495_12709 404
180 3300046501 Ga0495607_0001268 Ga0495607_0001268_12893_14107 404
181 3300046501 Ga0495607_0014069 Ga0495607_0014069_377_1648 404
182 3300046507 Ga0495606_0003479 Ga0495606_0003479_13764_14978 404
183 3300046512 Ga0495610_0006040 Ga0495610_0006040_4427_5641 404
184 3300046513 Ga0495616_0000831 Ga0495616_0000831_13864_15078 404
185 3300046519 Ga0495632_0000005 Ga0495632_0000005_349429_350643 404
186 3300046519 Ga0495632_0003976 Ga0495632_0003976_7309_8523 404
187 3300047323 Ga0495683_0005096 Ga0495683_0005096_1666_2880 404
188 3300047472 Ga0495686_0000050 Ga0495686_0000050_13071_14285 404
189 3300047472 Ga0495686_0038330 Ga0495686_0038330_297_1511 404
190 3300048904 Ga0496101_0002985 Ga0496101_0002985_5097_6311 404
191 3300048909 Ga0496106_0004672 Ga0496106_0004672_7662_8876 404
192 3300048913 Ga0496110_0160192 Ga0496110_0160192_461_1678 404
193 3300048920 Ga0496117_0090429 Ga0496117_0090429_62_1276 404
194 3300048921 Ga0496118_0009035 Ga0496118_0009035_1471_2685 404
195 3300048924 Ga0496121_0010948 Ga0496121_0010948_7483_8697 404
196 3300048925 Ga0496122_0021458 Ga0496122_0021458_54_1268 404
197 3300048926 Ga0496123_0035865 Ga0496123_0035865_1480_2694 404
198 3300048927 Ga0496124_0013382 Ga0496124_0013382_4266_5480 404
199 3300048928 Ga0496125_0041321 Ga0496125_0041321_1768_3045 404
200 3300049579 Ga0501043_0009282 Ga0501043_0009282_6324_7544 404
201 3300053117 Ga0500593_000029 Ga0500593_000029_3646_4875 404
202 3300053139 Ga0500568_0000004 Ga0500568_0000004_443270_444499 404
203 iso_pu_bacteria 2643221547 2643758963 404
204 iso_pu_bacteria 2821443989 2821450516 404
205 3300005548 Ga0070665_100147992 Ga0070665_1001479922 405
206 3300013307 Ga0157372_10144340 Ga0157372_101443403 405
207 3300014326 Ga0157380_10415000 Ga0157380_104150001 405
208 3300028379 Ga0268266_10118643 Ga0268266_101186432 405
209 3300039437 Ga0436365_0100706 Ga0436365_0100706_515_1738 405
210 3300041451 Ga0451791_0277231 Ga0451791_0277231_782_2029 405
211 3300041460 Ga0451802_1718205 Ga0451802_1718205_636_1883 405
212 3300044694 Ga0466963_0003406 Ga0466963_0003406_3625_4848 405
213 3300045976 Ga0466967_0027137 Ga0466967_0027137_2849_4072 405
214 3300049570 Ga0501033_0009147 Ga0501033_0009147_3430_4650 405
215 3300049571 Ga0501034_0023832 Ga0501034_0023832_2853_4073 405
216 3300049573 Ga0501037_0040554 Ga0501037_0040554_505_1725 405
217 3300049579 Ga0501043_0004057 Ga0501043_0004057_10529_11749 405
218 3300049581 Ga0501047_0020864 Ga0501047_0020864_1412_2632 405
219 3300049822 Ga0501035_0017105 Ga0501035_0017105_1599_2819 405
220 3300050496 nmdc:mga07m45_128797_c1 nmdc:mga07m45_128797_c1_216_1439 405
221 3300001904 JGI24736J21556_1000276 JGI24736J21556_10002762 406
222 3300003578 Ga0006562J51391_1035851 Ga0006562J51391_10358512 406
223 3300006186 Ga0075369_10020161 Ga0075369_100201612 406
224 3300013105 Ga0157369_10011389 Ga0157369_100113896 406
225 3300025258 Ga0209129_1000331 Ga0209129_10003319 406
226 3300025303 Ga0209051_1008798 Ga0209051_10087982 406
227 3300025904 Ga0207647_10000130 Ga0207647_1000013018 406
228 3300048921 Ga0496118_0003339 Ga0496118_0003339_9371_10591 406
229 3300048924 Ga0496121_0001206 Ga0496121_0001206_30837_32057 406
230 3300048925 Ga0496122_0011038 Ga0496122_0011038_7864_9084 406
231 3300048928 Ga0496125_0055206 Ga0496125_0055206_581_1801 406

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04055

Radical_SAM

Radical SAM superfamily

120

269

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
3t7v-assembly1.cif.gz_A crystal structure of methylornithine synthase (pylb) 0.8225 60 259
5exk-assembly6.cif.gz_K crystal structure of m. tuberculosis lipoyl synthase with 6-thiooctanoyl peptide intermediate 0.8016 64 259
7o1p-assembly1.cif.gz_A [fefe]-hydrogenase maturase hyde from t. maritima (c-ter stretch absent) 0.7968 60 276
5exi-assembly1.cif.gz_A crystal structure of m. tuberculosis lipoyl synthase at 2.28 a resolution 0.7948 56 263
3iix-assembly1.cif.gz_A x-ray structure of the fefe-hydrogenase maturase hyde from t. maritima in complex with methionine and 5'deoxyadenosine 0.7884 60 276
ID Description Score Start End Superfamily
3t7vA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8225 60 259 3.20.20.70
af_P9WPQ7_39_344_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8009 61 283 3.20.20.70
af_Q2FZX4_3_265_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7886 64 278 3.20.20.70
af_P60716_82_298_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.785 62 283 3.20.20.70
3ciwA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7682 60 276 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A836ZM81-F1-model_v4 deleted 0.9889 41 207
AF-A0A838QR15-F1-model_v4 Pathogenicity locus 0.9849 307 383
AF-A0A658G1L5-F1-model_v4 deleted 0.9793 62 392
AF-A0A5R2N758-F1-model_v4 Putative DNA modification/repair radical SAM protein 0.9727 43 261 GO:0003824
GO:0046872
GO:0051536
AF-A0A658NJ50-F1-model_v4 Biotin synthase 0.9693 43 110

Feature Viewer

pLDDT pTM Quality
84.79 0.83 High
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Predicted Structure (AlphaFold2)

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