F343498

General Info

Members Datasets Scaffolds Average Seq Length
230 119 217 321

Family's Representative Sequence

Representative Sequence 3300050511|nmdc:mga08y16_130148_c1|nmdc:mga08y16_130148_c1_821_1879
Length 352
Sequence LHCASELTALCAGRILHSNADKEYQGEAGMHRREFLARAGGALAAGFATRAWSQAQGWPERPVKLILPYAPGGATDLIGRPWADKLAQAFGQQFVIENRGGASGIIGTEAAAKAAPDGYTFLLTPNAPLNVQPLLRKTPYDPAKAFVPVGRVGDLISGFVIHPAVGVKTFQEMLDYARKYPGKLAYGSAGLGTSSHLRLEMLKAKAGIDILHVPYRGNADALNDILANNVQMMNEINPMPHVKAGKLVLLDISYPERHPDFPGVPTLFELGYGEAYVPSWYSIWAPAATPREIVDKLNAKMVEIANTPEMKARLLAINVAFTPQSPEEMGRHLVEDTKRVAELIKATNLKLE

Samples

Sample ID Description Type Environment
1 2643221683 Variovorax sp. Root473 Isolate Unclassified
2 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
31 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
37 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
77 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
78 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
79 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
80 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
81 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
82 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
83 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
84 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
85 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
86 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
87 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
88 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
89 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
90 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
91 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
92 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
93 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
94 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
95 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
96 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
97 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
98 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
100 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
102 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
103 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
104 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
105 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
106 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
107 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
108 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
109 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
110 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
111 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
112 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
113 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
114 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
115 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
116 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
117 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
118 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
119 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.13
Metatranscriptomes 0
Isolates 0.87

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.52
Nodule 0
Rhizoplane 12.17
Rhizosphere 80.43
Stem 0
Stem Tuber 0
Unclassified 0.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070676_10060412 3300005328 Bacteria 2251
2 Ga0070690_100065615 3300005330 Bacteria 2347
3 Ga0070680_100217121 3300005336 Bacteria 1614
4 Ga0070680_100413673 3300005336 Bacteria 1150
5 Ga0070689_100066475 3300005340 Bacteria 2809
6 Ga0070691_10018408 3300005341 Bacteria 3220
7 Ga0070675_100274845 3300005354 Bacteria 1479
8 Ga0070705_100082875 3300005440 Bacteria 1975
9 Ga0070700_100050852 3300005441 Bacteria 2578
10 Ga0070694_100020778 3300005444 Bacteria 4189
11 Ga0070694_100188858 3300005444 Bacteria 1529
12 Ga0070681_10000228 3300005458 Bacteria 44234
13 Ga0068867_100156686 3300005459 Bacteria 1793
14 Ga0068867_100293785 3300005459 Bacteria 1337
15 Ga0070706_100077963 3300005467 Bacteria 3067
16 Ga0070706_100272359 3300005467 Bacteria 1580
17 Ga0070699_100009515 3300005518 Bacteria 8420
18 Ga0070699_100050209 3300005518 Bacteria 3611
19 Ga0070699_100111931 3300005518 Bacteria 2397
20 Ga0070679_100107866 3300005530 Bacteria 2770
21 Ga0070684_100119241 3300005535 Bacteria 2372
22 Ga0070697_100050533 3300005536 Bacteria 3375
23 Ga0070695_100008650 3300005545 Bacteria 6048
24 Ga0070695_100067563 3300005545 Bacteria 2332
25 Ga0070695_100115328 3300005545 Bacteria 1830
26 Ga0070696_100152224 3300005546 Bacteria 1699
27 Ga0070665_100145618 3300005548 Bacteria 2372
28 Ga0070704_100012487 3300005549 Bacteria 5246
29 Ga0070704_100023244 3300005549 Bacteria 4044
30 Ga0070704_100035027 3300005549 Bacteria 3409
31 Ga0068859_100091522 3300005617 Bacteria 3092
32 Ga0068859_100276959 3300005617 Bacteria 1770
33 Ga0068864_100056452 3300005618 Bacteria 3392
34 Ga0068864_100541382 3300005618 Bacteria 1124
35 Ga0068870_10139038 3300005840 Bacteria 1419
36 Ga0068863_100145887 3300005841 Bacteria 2263
37 Ga0068860_100064618 3300005843 Bacteria 3475
38 Ga0068862_100109954 3300005844 Bacteria 2418
39 Ga0081455_10000108 3300005937 Bacteria 93068
40 Ga0081455_10150667 3300005937 Bacteria 1794
41 Ga0081538_10035810 3300005981 Bacteria 3254
42 Ga0081540_1000348 3300005983 Bacteria 46668
43 Ga0081540_1019781 3300005983 Bacteria 4077
44 Ga0081539_10006358 3300005985 Bacteria 11372
45 Ga0081539_10039360 3300005985 Bacteria 2791
46 Ga0081539_10049085 3300005985 Bacteria 2397
47 Ga0075363_100022403 3300006048 Bacteria 3194
48 Ga0075364_10046583 3300006051 Bacteria 2823
49 Ga0070712_100102130 3300006175 Bacteria 2123
50 Ga0075362_10023150 3300006177 Bacteria 2625
51 Ga0075362_10036335 3300006177 Bacteria 2155
52 Ga0075367_10053511 3300006178 Bacteria 2392
53 Ga0097621_100002812 3300006237 Bacteria 11924
54 Ga0068871_100075823 3300006358 Bacteria 2776
55 Ga0075428_100128121 3300006844 Bacteria 2761
56 Ga0075430_100127836 3300006846 Bacteria 2118
57 Ga0075430_100269793 3300006846 Bacteria 1408
58 Ga0075430_100350352 3300006846 Bacteria 1219
59 Ga0075431_100025345 3300006847 Bacteria 6080
60 Ga0075433_10008844 3300006852 Bacteria 8035
61 Ga0075433_10077465 3300006852 Bacteria 2928
62 Ga0075433_10128391 3300006852 Bacteria 2252
63 Ga0075433_10151856 3300006852 Bacteria 2060
64 Ga0075434_100000798 3300006871 Bacteria 24908
65 Ga0075434_100001780 3300006871 Bacteria 18578
66 Ga0075434_100010900 3300006871 Bacteria 8548
67 Ga0075434_100293466 3300006871 Bacteria 1646
68 Ga0075434_100607372 3300006871 Bacteria 1113
69 Ga0075429_100118977 3300006880 Bacteria 2308
70 Ga0075436_100002496 3300006914 Bacteria 12654
71 Ga0075436_100106585 3300006914 Bacteria 1955
72 Ga0097620_100091515 3300006931 Bacteria 3092
73 Ga0097620_100276950 3300006931 Bacteria 1770
74 Ga0075435_100007190 3300007076 Bacteria 7918
75 Ga0075435_100034527 3300007076 Bacteria 4008
76 Ga0075435_100144308 3300007076 Bacteria 1999
77 Ga0075435_100213975 3300007076 Bacteria 1636
78 Ga0075435_100221803 3300007076 Bacteria 1605
79 Ga0111539_10005139 3300009094 Bacteria 16967
80 Ga0111539_10007502 3300009094 Bacteria 13959
81 Ga0111539_10190872 3300009094 Bacteria 2390
82 Ga0111539_10311626 3300009094 Bacteria 1832
83 Ga0105245_10146616 3300009098 Bacteria 2227
84 Ga0105247_10282817 3300009101 Bacteria 1145
85 Ga0114129_10030451 3300009147 Bacteria 7637
86 Ga0114129_10078778 3300009147 Bacteria 4583
87 Ga0114129_10353379 3300009147 Bacteria 1946
88 Ga0114129_10408112 3300009147 Bacteria 1789
89 Ga0105243_10180374 3300009148 Bacteria 1836
90 Ga0105249_10039875 3300009553 Bacteria 4264
91 Ga0105239_10588761 3300010375 Bacteria 1268
92 Ga0157375_10051773 3300013308 Bacteria 4034
93 Ga0163163_10192163 3300014325 Bacteria 2090
94 Ga0157380_10046425 3300014326 Bacteria 3411
95 Ga0157380_10090314 3300014326 Bacteria 2526
96 Ga0157380_10171624 3300014326 Bacteria 1896
97 Ga0157379_10072868 3300014968 Bacteria 3074
98 Ga0157379_10080970 3300014968 Bacteria 2909
99 Ga0207684_10041365 3300025910 Bacteria 3908
100 Ga0207684_10063949 3300025910 Bacteria 3123
101 Ga0207654_10289614 3300025911 Bacteria 1110
102 Ga0207693_10064646 3300025915 Bacteria 2865
103 Ga0207646_10170285 3300025922 Bacteria 1967
104 Ga0207670_10047325 3300025936 Bacteria 2863
105 Ga0207712_10036587 3300025961 Bacteria 3345
106 Ga0207668_10280032 3300025972 Bacteria 1367
107 Ga0207708_10007561 3300026075 Bacteria 8038
108 Ga0207708_10119116 3300026075 Bacteria 2056
109 Ga0207708_10211463 3300026075 Bacteria 1551
110 Ga0207641_10071982 3300026088 Bacteria 2976
111 Ga0207641_10126670 3300026088 Bacteria 2287
112 Ga0207648_10432921 3300026089 Bacteria 1196
113 Ga0207674_10086456 3300026116 Bacteria 3130
114 Ga0207675_100015920 3300026118 Bacteria 7014
115 Ga0207675_100134825 3300026118 Bacteria 2342
116 Ga0207683_10022764 3300026121 Bacteria 5382
117 Ga0207428_10017754 3300027907 Bacteria 6102
118 Ga0207428_10020530 3300027907 Bacteria 5610
119 Ga0268265_10276856 3300028380 Bacteria 1499
120 Ga0268265_10293926 3300028380 Bacteria 1460
121 Ga0268264_10171356 3300028381 Bacteria 1963
122 Ga0373938_0003819 3300034957 Bacteria 2488
123 Ga0373940_0000712 3300035088 Bacteria 5391
124 Ga0373941_0012497 3300035115 Bacteria 2222
125 Ga0373961_0004475 3300035241 Bacteria 3378
126 Ga0373961_0016148 3300035241 Bacteria 1920
127 Ga0373961_0032917 3300035241 Bacteria 1457
128 Ga0373962_0042593 3300035242 Bacteria 1284
129 Ga0373931_0000717 3300035691 Bacteria 13738
130 Ga0373931_0060779 3300035691 Bacteria 2035
131 Ga0373927_0110477 3300035695 Bacteria 1791
132 Ga0451576_0021329 3300045051 Bacteria 7041
133 Ga0451576_0047012 3300045051 Bacteria 4540
134 Ga0495584_0044983 3300046491 Bacteria 2227
135 Ga0495669_0003590 3300046684 Bacteria 6398
136 Ga0496102_0089407 3300048905 Bacteria 2849
137 Ga0496102_0582416 3300048905 Bacteria 1042
138 Ga0496104_0001104 3300048907 Bacteria 23081
139 Ga0496104_0004722 3300048907 Bacteria 11859
140 Ga0496104_0006015 3300048907 Bacteria 10639
141 Ga0496105_0052321 3300048908 Bacteria 3373
142 Ga0496105_0181150 3300048908 Bacteria 1725
143 Ga0496106_0034132 3300048909 Bacteria 3799
144 Ga0496106_0345720 3300048909 Bacteria 1195
145 Ga0496107_0077830 3300048910 Bacteria 2416
146 Ga0496107_0255566 3300048910 Bacteria 1304
147 Ga0496109_0119424 3300048912 Bacteria 2455
148 Ga0496109_0161955 3300048912 Bacteria 2096
149 Ga0496110_0027777 3300048913 Bacteria 4854
150 Ga0496110_0057083 3300048913 Bacteria 3436
151 Ga0496111_0014704 3300048914 Bacteria 5354
152 Ga0496111_0048417 3300048914 Bacteria 3062
153 Ga0496111_0125862 3300048914 Bacteria 1894
154 Ga0496111_0292907 3300048914 Bacteria 1207
155 Ga0496112_0013293 3300048915 Bacteria 7600
156 Ga0496112_0032687 3300048915 Bacteria 5052
157 Ga0496113_0019333 3300048916 Bacteria 4763
158 Ga0496113_0079262 3300048916 Bacteria 2514
159 Ga0496113_0318664 3300048916 Bacteria 1246
160 Ga0496114_0044653 3300048917 Bacteria 3678
161 Ga0496115_0030541 3300048918 Bacteria 4240
162 Ga0496115_0033783 3300048918 Bacteria 4040
163 Ga0496115_0177502 3300048918 Bacteria 1761
164 Ga0501034_0231887 3300049571 Bacteria 1795
165 Ga0501067_0084761 3300049583 Bacteria 1758
166 Ga0501035_0516473 3300049822 Bacteria 982
167 Ga0501044_0031854 3300049823 Bacteria 5546
168 nmdc:mga00v17_17128_c1 3300050491 Bacteria 4094
169 nmdc:mga00v17_8996_c1 3300050491 Bacteria 5388
170 nmdc:mga0yw44_172593_c1 3300050492 Bacteria 1420
171 nmdc:mga0yw44_52399_c1 3300050492 Bacteria 2473
172 nmdc:mga06z11_86965_c1 3300050494 Bacteria 1689
173 nmdc:mga07m45_94204_c1 3300050496 Bacteria 1717
174 nmdc:mga05p37_25553_c1 3300050507 Bacteria 7184
175 nmdc:mga05p37_333872_c1 3300050507 Bacteria 1789
176 nmdc:mga05p37_54186_c1 3300050507 Bacteria 4934
177 nmdc:mga05p37_66418_c1 3300050507 Bacteria 4436
178 nmdc:mga09592_125861_c1 3300050508 Bacteria 2203
179 nmdc:mga09592_239903_c1 3300050508 Bacteria 1571
180 nmdc:mga09592_502652_c1 3300050508 Bacteria 1044
181 nmdc:mga0qj67_116747_c1 3300050509 Bacteria 2157
182 nmdc:mga0qj67_162199_c1 3300050509 Bacteria 1815
183 nmdc:mga0qj67_203698_c1 3300050509 Bacteria 1607
184 nmdc:mga0qj67_34032_c1 3300050509 Bacteria 3979
185 nmdc:mga0qj67_427976_c1 3300050509 Bacteria 1067
186 nmdc:mga06r32_10126_c1 3300050510 Bacteria 8511
187 nmdc:mga06r32_128174_c1 3300050510 Bacteria 2508
188 nmdc:mga06r32_182090_c1 3300050510 Bacteria 2087
189 nmdc:mga06r32_33774_c1 3300050510 Bacteria 4820
190 nmdc:mga06r32_64008_c1 3300050510 Bacteria 3546
191 nmdc:mga06r32_65973_c1 3300050510 Bacteria 3492
192 nmdc:mga08y16_102560_c1 3300050511 Bacteria 2979
193 nmdc:mga08y16_130148_c1 3300050511 Bacteria 2618
194 nmdc:mga08y16_281979_c1 3300050511 Bacteria 1714
195 nmdc:mga08y16_368952_c1 3300050511 Bacteria 1473
196 nmdc:mga08y16_42915_c1 3300050511 Bacteria 4738
197 nmdc:mga0n895_150595_c1 3300050512 Bacteria 2357
198 nmdc:mga0n895_2879_c1 3300050512 Bacteria 13654
199 nmdc:mga0n895_518243_c1 3300050512 Bacteria 1200
200 nmdc:mga0n895_9992_c1 3300050512 Bacteria 8351
201 nmdc:mga0rr50_3211_c1 3300050513 Bacteria 9360
202 nmdc:mga0rr50_332598_c1 3300050513 Bacteria 1275
203 nmdc:mga0rr50_35647_c1 3300050513 Bacteria 3575
204 nmdc:mga0rr50_81442_c1 3300050513 Bacteria 2498
205 nmdc:mga08x19_11127_c1 3300050514 Bacteria 5416
206 nmdc:mga08x19_46970_c1 3300050514 Bacteria 2763
207 nmdc:mga08x19_84602_c1 3300050514 Bacteria 2087
208 nmdc:mga0a205_125655_c1 3300050515 Bacteria 2464
209 nmdc:mga0a205_144538_c1 3300050515 Bacteria 2278
210 nmdc:mga0a205_15259_c1 3300050515 Bacteria 7178
211 nmdc:mga0a205_51183_c1 3300050515 Bacteria 3986
212 nmdc:mga0a205_56550_c1 3300050515 Bacteria 3787
213 Ga0495619_0082190 3300053085 Bacteria 2171
214 Ga0500644_0001039 3300053088 Bacteria 8332
215 Ga0500594_0001078 3300053118 Bacteria 5852
216 Ga0500590_017400 3300053148 Bacteria 3716
217 Ga0500616_0065811 3300053153 Bacteria 1863

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049822 Ga0501035_0516473 Ga0501035_0516473_133_960 275
2 3300005444 Ga0070694_100188858 Ga0070694_1001888581 288
3 3300026075 Ga0207708_10211463 Ga0207708_102114632 288
4 3300050514 nmdc:mga08x19_11127_c1 nmdc:mga08x19_11127_c1_2904_3788 290
5 3300005548 Ga0070665_100145618 Ga0070665_1001456182 291
6 3300005981 Ga0081538_10035810 Ga0081538_100358102 302
7 3300050507 nmdc:mga05p37_66418_c1 nmdc:mga05p37_66418_c1_1581_2534 303
8 3300048914 Ga0496111_0048417 Ga0496111_0048417_506_1474 308
9 3300048915 Ga0496112_0013293 Ga0496112_0013293_617_1585 308
10 3300006844 Ga0075428_100128121 Ga0075428_1001281212 309
11 3300006880 Ga0075429_100118977 Ga0075429_1001189772 309
12 3300050508 nmdc:mga09592_125861_c1 nmdc:mga09592_125861_c1_919_1890 309
13 3300050509 nmdc:mga0qj67_116747_c1 nmdc:mga0qj67_116747_c1_732_1703 309
14 3300050510 nmdc:mga06r32_10126_c1 nmdc:mga06r32_10126_c1_1828_2799 309
15 3300005545 Ga0070695_100067563 Ga0070695_1000675634 311
16 3300006175 Ga0070712_100102130 Ga0070712_1001021302 311
17 3300025915 Ga0207693_10064646 Ga0207693_100646463 311
18 3300026088 Ga0207641_10071982 Ga0207641_100719822 311
19 3300046684 Ga0495669_0003590 Ga0495669_0003590_809_1759 311
20 3300005336 Ga0070680_100413673 Ga0070680_1004136731 312
21 3300005444 Ga0070694_100020778 Ga0070694_1000207784 312
22 3300005458 Ga0070681_10000228 Ga0070681_1000022830 312
23 3300005459 Ga0068867_100156686 Ga0068867_1001566862 312
24 3300005518 Ga0070699_100009515 Ga0070699_1000095153 312
25 3300005530 Ga0070679_100107866 Ga0070679_1001078663 312
26 3300005545 Ga0070695_100115328 Ga0070695_1001153282 312
27 3300005549 Ga0070704_100012487 Ga0070704_1000124872 312
28 3300005841 Ga0068863_100145887 Ga0068863_1001458872 312
29 3300006914 Ga0075436_100002496 Ga0075436_1000024965 312
30 3300006914 Ga0075436_100106585 Ga0075436_1001065853 312
31 3300026088 Ga0207641_10126670 Ga0207641_101266704 312
32 3300035241 Ga0373961_0004475 Ga0373961_0004475_56_1009 312
33 3300035691 Ga0373931_0000717 Ga0373931_0000717_4464_5417 312
34 3300045051 Ga0451576_0047012 Ga0451576_0047012_20_976 312
35 3300049583 Ga0501067_0084761 Ga0501067_0084761_547_1500 312
36 3300049823 Ga0501044_0031854 Ga0501044_0031854_2527_3465 312
37 3300050514 nmdc:mga08x19_46970_c1 nmdc:mga08x19_46970_c1_523_1476 312
38 3300050514 nmdc:mga08x19_84602_c1 nmdc:mga08x19_84602_c1_968_1921 312
39 3300005330 Ga0070690_100065615 Ga0070690_1000656152 313
40 3300005535 Ga0070684_100119241 Ga0070684_1001192413 313
41 3300005985 Ga0081539_10006358 Ga0081539_100063588 313
42 3300006237 Ga0097621_100002812 Ga0097621_1000028129 313
43 3300006358 Ga0068871_100075823 Ga0068871_1000758232 313
44 3300006852 Ga0075433_10151856 Ga0075433_101518562 313
45 3300007076 Ga0075435_100144308 Ga0075435_1001443082 313
46 3300050513 nmdc:mga0rr50_81442_c1 nmdc:mga0rr50_81442_c1_250_1239 313
47 3300050515 nmdc:mga0a205_56550_c1 nmdc:mga0a205_56550_c1_2241_3230 313
48 3300005440 Ga0070705_100082875 Ga0070705_1000828752 315
49 3300005518 Ga0070699_100111931 Ga0070699_1001119312 315
50 3300005546 Ga0070696_100152224 Ga0070696_1001522241 315
51 3300005549 Ga0070704_100035027 Ga0070704_1000350272 315
52 3300053118 Ga0500594_0001078 Ga0500594_0001078_642_1619 315
53 iso_pu_bacteria 2881412998 2881416589 315
54 3300005336 Ga0070680_100217121 Ga0070680_1002171212 316
55 3300005441 Ga0070700_100050852 Ga0070700_1000508523 316
56 3300005459 Ga0068867_100293785 Ga0068867_1002937851 316
57 3300005467 Ga0070706_100077963 Ga0070706_1000779633 316
58 3300005467 Ga0070706_100272359 Ga0070706_1002723592 316
59 3300005518 Ga0070699_100050209 Ga0070699_1000502092 316
60 3300005536 Ga0070697_100050533 Ga0070697_1000505334 316
61 3300005549 Ga0070704_100023244 Ga0070704_1000232444 316
62 3300005617 Ga0068859_100091522 Ga0068859_1000915222 316
63 3300005618 Ga0068864_100056452 Ga0068864_1000564523 316
64 3300005843 Ga0068860_100064618 Ga0068860_1000646183 316
65 3300005844 Ga0068862_100109954 Ga0068862_1001099542 316
66 3300006847 Ga0075431_100025345 Ga0075431_1000253453 316
67 3300006931 Ga0097620_100091515 Ga0097620_1000915152 316
68 3300009147 Ga0114129_10353379 Ga0114129_103533792 316
69 3300009147 Ga0114129_10408112 Ga0114129_104081123 316
70 3300009148 Ga0105243_10180374 Ga0105243_101803742 316
71 3300009553 Ga0105249_10039875 Ga0105249_100398753 316
72 3300025910 Ga0207684_10041365 Ga0207684_100413654 316
73 3300025910 Ga0207684_10063949 Ga0207684_100639492 316
74 3300025911 Ga0207654_10289614 Ga0207654_102896142 316
75 3300025922 Ga0207646_10170285 Ga0207646_101702852 316
76 3300025961 Ga0207712_10036587 Ga0207712_100365872 316
77 3300026075 Ga0207708_10007561 Ga0207708_100075615 316
78 3300026116 Ga0207674_10086456 Ga0207674_100864563 316
79 3300026118 Ga0207675_100134825 Ga0207675_1001348252 316
80 3300028380 Ga0268265_10276856 Ga0268265_102768562 316
81 3300028380 Ga0268265_10293926 Ga0268265_102939262 316
82 3300028381 Ga0268264_10171356 Ga0268264_101713562 316
83 3300045051 Ga0451576_0021329 Ga0451576_0021329_3610_4575 316
84 3300049571 Ga0501034_0231887 Ga0501034_0231887_28_978 316
85 3300049823 Ga0501044_0031854 Ga0501044_0031854_1378_2328 316
86 3300050507 nmdc:mga05p37_333872_c1 nmdc:mga05p37_333872_c1_26_988 316
87 3300050510 nmdc:mga06r32_182090_c1 nmdc:mga06r32_182090_c1_666_1634 316
88 3300005983 Ga0081540_1019781 Ga0081540_10197812 317
89 3300006178 Ga0075367_10053511 Ga0075367_100535113 317
90 3300026089 Ga0207648_10432921 Ga0207648_104329211 317
91 3300050492 nmdc:mga0yw44_172593_c1 nmdc:mga0yw44_172593_c1_91_1068 317
92 3300050494 nmdc:mga06z11_86965_c1 nmdc:mga06z11_86965_c1_217_1194 317
93 3300050509 nmdc:mga0qj67_427976_c1 nmdc:mga0qj67_427976_c1_56_1009 317
94 iso_pu_bacteria 2643221683 2644464343 317
95 3300006871 Ga0075434_100010900 Ga0075434_1000109009 319
96 3300007076 Ga0075435_100007190 Ga0075435_1000071903 319
97 3300048909 Ga0496106_0345720 Ga0496106_0345720_25_1002 319
98 3300048918 Ga0496115_0033783 Ga0496115_0033783_752_1729 319
99 3300050491 nmdc:mga00v17_8996_c1 nmdc:mga00v17_8996_c1_3377_4351 319
100 3300050512 nmdc:mga0n895_2879_c1 nmdc:mga0n895_2879_c1_12214_13173 319
101 3300050513 nmdc:mga0rr50_3211_c1 nmdc:mga0rr50_3211_c1_1330_2289 319
102 3300053148 Ga0500590_017400 Ga0500590_017400_2718_3692 319
103 3300026121 Ga0207683_10022764 Ga0207683_100227643 320
104 3300053153 Ga0500616_0065811 Ga0500616_0065811_31_1023 320
105 3300006852 Ga0075433_10128391 Ga0075433_101283913 321
106 3300006871 Ga0075434_100000798 Ga0075434_1000007986 321
107 3300050512 nmdc:mga0n895_150595_c1 nmdc:mga0n895_150595_c1_318_1307 321
108 3300050513 nmdc:mga0rr50_35647_c1 nmdc:mga0rr50_35647_c1_1301_2290 321
109 3300005341 Ga0070691_10018408 Ga0070691_100184082 322
110 3300005354 Ga0070675_100274845 Ga0070675_1002748451 322
111 3300005545 Ga0070695_100008650 Ga0070695_1000086501 322
112 3300005840 Ga0068870_10139038 Ga0068870_101390381 322
113 3300005937 Ga0081455_10000108 Ga0081455_100001083 322
114 3300005983 Ga0081540_1000348 Ga0081540_10003484 322
115 3300006051 Ga0075364_10046583 Ga0075364_100465832 322
116 3300006177 Ga0075362_10023150 Ga0075362_100231502 322
117 3300006177 Ga0075362_10036335 Ga0075362_100363352 322
118 3300006852 Ga0075433_10008844 Ga0075433_100088443 322
119 3300006871 Ga0075434_100001780 Ga0075434_1000017806 322
120 3300007076 Ga0075435_100034527 Ga0075435_1000345273 322
121 3300009094 Ga0111539_10007502 Ga0111539_100075025 322
122 3300014326 Ga0157380_10046425 Ga0157380_100464252 322
123 3300026118 Ga0207675_100015920 Ga0207675_1000159205 322
124 3300027907 Ga0207428_10017754 Ga0207428_100177544 322
125 3300034957 Ga0373938_0003819 Ga0373938_0003819_898_1866 322
126 3300035088 Ga0373940_0000712 Ga0373940_0000712_173_1141 322
127 3300035115 Ga0373941_0012497 Ga0373941_0012497_545_1513 322
128 3300035241 Ga0373961_0016148 Ga0373961_0016148_500_1468 322
129 3300035241 Ga0373961_0032917 Ga0373961_0032917_56_1024 322
130 3300035242 Ga0373962_0042593 Ga0373962_0042593_292_1260 322
131 3300035691 Ga0373931_0060779 Ga0373931_0060779_936_1904 322
132 3300046491 Ga0495584_0044983 Ga0495584_0044983_683_1651 322
133 3300050491 nmdc:mga00v17_17128_c1 nmdc:mga00v17_17128_c1_627_1601 322
134 3300050511 nmdc:mga08y16_368952_c1 nmdc:mga08y16_368952_c1_494_1462 322
135 3300050511 nmdc:mga08y16_42915_c1 nmdc:mga08y16_42915_c1_1309_2277 322
136 3300050512 nmdc:mga0n895_9992_c1 nmdc:mga0n895_9992_c1_3224_4192 322
137 3300050515 nmdc:mga0a205_15259_c1 nmdc:mga0a205_15259_c1_903_1871 322
138 3300005328 Ga0070676_10060412 Ga0070676_100604122 323
139 3300005340 Ga0070689_100066475 Ga0070689_1000664752 323
140 3300005617 Ga0068859_100276959 Ga0068859_1002769594 323
141 3300005618 Ga0068864_100541382 Ga0068864_1005413821 323
142 3300005937 Ga0081455_10150667 Ga0081455_101506672 323
143 3300005985 Ga0081539_10039360 Ga0081539_100393602 323
144 3300005985 Ga0081539_10049085 Ga0081539_100490852 323
145 3300006048 Ga0075363_100022403 Ga0075363_1000224033 323
146 3300006846 Ga0075430_100127836 Ga0075430_1001278362 323
147 3300006846 Ga0075430_100269793 Ga0075430_1002697932 323
148 3300006846 Ga0075430_100350352 Ga0075430_1003503522 323
149 3300006852 Ga0075433_10077465 Ga0075433_100774652 323
150 3300006871 Ga0075434_100293466 Ga0075434_1002934662 323
151 3300006871 Ga0075434_100607372 Ga0075434_1006073721 323
152 3300006931 Ga0097620_100276950 Ga0097620_1002769504 323
153 3300007076 Ga0075435_100213975 Ga0075435_1002139752 323
154 3300007076 Ga0075435_100221803 Ga0075435_1002218032 323
155 3300009094 Ga0111539_10005139 Ga0111539_1000513910 323
156 3300009094 Ga0111539_10005139 Ga0111539_1000513911 323
157 3300009094 Ga0111539_10005139 Ga0111539_1000513912 323
158 3300009094 Ga0111539_10190872 Ga0111539_101908723 323
159 3300009094 Ga0111539_10311626 Ga0111539_103116261 323
160 3300009098 Ga0105245_10146616 Ga0105245_101466162 323
161 3300009101 Ga0105247_10282817 Ga0105247_102828172 323
162 3300009147 Ga0114129_10030451 Ga0114129_100304514 323
163 3300009147 Ga0114129_10030451 Ga0114129_100304515 323
164 3300009147 Ga0114129_10030451 Ga0114129_100304516 323
165 3300009147 Ga0114129_10078778 Ga0114129_100787782 323
166 3300010375 Ga0105239_10588761 Ga0105239_105887612 323
167 3300013308 Ga0157375_10051773 Ga0157375_100517735 323
168 3300014325 Ga0163163_10192163 Ga0163163_101921632 323
169 3300014326 Ga0157380_10090314 Ga0157380_100903142 323
170 3300014326 Ga0157380_10171624 Ga0157380_101716241 323
171 3300014968 Ga0157379_10072868 Ga0157379_100728683 323
172 3300014968 Ga0157379_10080970 Ga0157379_100809702 323
173 3300025936 Ga0207670_10047325 Ga0207670_100473252 323
174 3300025972 Ga0207668_10280032 Ga0207668_102800322 323
175 3300026075 Ga0207708_10119116 Ga0207708_101191161 323
176 3300027907 Ga0207428_10020530 Ga0207428_100205302 323
177 3300027907 Ga0207428_10020530 Ga0207428_100205303 323
178 3300027907 Ga0207428_10020530 Ga0207428_100205304 323
179 3300035695 Ga0373927_0110477 Ga0373927_0110477_515_1486 323
180 3300048905 Ga0496102_0089407 Ga0496102_0089407_1674_2645 323
181 3300048905 Ga0496102_0582416 Ga0496102_0582416_27_998 323
182 3300048907 Ga0496104_0001104 Ga0496104_0001104_20690_21661 323
183 3300048907 Ga0496104_0004722 Ga0496104_0004722_8677_9648 323
184 3300048907 Ga0496104_0006015 Ga0496104_0006015_8627_9598 323
185 3300048908 Ga0496105_0052321 Ga0496105_0052321_2235_3206 323
186 3300048908 Ga0496105_0181150 Ga0496105_0181150_635_1606 323
187 3300048909 Ga0496106_0034132 Ga0496106_0034132_63_1034 323
188 3300048910 Ga0496107_0077830 Ga0496107_0077830_483_1454 323
189 3300048910 Ga0496107_0255566 Ga0496107_0255566_312_1283 323
190 3300048912 Ga0496109_0119424 Ga0496109_0119424_1050_2021 323
191 3300048912 Ga0496109_0161955 Ga0496109_0161955_151_1122 323
192 3300048913 Ga0496110_0027777 Ga0496110_0027777_2755_3726 323
193 3300048913 Ga0496110_0057083 Ga0496110_0057083_1185_2156 323
194 3300048914 Ga0496111_0014704 Ga0496111_0014704_2643_3614 323
195 3300048914 Ga0496111_0125862 Ga0496111_0125862_515_1486 323
196 3300048914 Ga0496111_0292907 Ga0496111_0292907_30_1001 323
197 3300048915 Ga0496112_0032687 Ga0496112_0032687_326_1297 323
198 3300048916 Ga0496113_0019333 Ga0496113_0019333_1642_2613 323
199 3300048916 Ga0496113_0079262 Ga0496113_0079262_120_1091 323
200 3300048916 Ga0496113_0318664 Ga0496113_0318664_10_981 323
201 3300048917 Ga0496114_0044653 Ga0496114_0044653_1810_2781 323
202 3300048918 Ga0496115_0030541 Ga0496115_0030541_1402_2373 323
203 3300048918 Ga0496115_0177502 Ga0496115_0177502_427_1398 323
204 3300050492 nmdc:mga0yw44_52399_c1 nmdc:mga0yw44_52399_c1_188_1162 323
205 3300050496 nmdc:mga07m45_94204_c1 nmdc:mga07m45_94204_c1_287_1264 323
206 3300050507 nmdc:mga05p37_25553_c1 nmdc:mga05p37_25553_c1_3239_4210 323
207 3300050507 nmdc:mga05p37_25553_c1 nmdc:mga05p37_25553_c1_4291_5262 323
208 3300050507 nmdc:mga05p37_25553_c1 nmdc:mga05p37_25553_c1_5328_6299 323
209 3300050507 nmdc:mga05p37_54186_c1 nmdc:mga05p37_54186_c1_2906_3940 323
210 3300050508 nmdc:mga09592_239903_c1 nmdc:mga09592_239903_c1_456_1427 323
211 3300050508 nmdc:mga09592_502652_c1 nmdc:mga09592_502652_c1_59_1030 323
212 3300050509 nmdc:mga0qj67_162199_c1 nmdc:mga0qj67_162199_c1_623_1594 323
213 3300050509 nmdc:mga0qj67_203698_c1 nmdc:mga0qj67_203698_c1_151_1122 323
214 3300050509 nmdc:mga0qj67_34032_c1 nmdc:mga0qj67_34032_c1_1156_2127 323
215 3300050510 nmdc:mga06r32_128174_c1 nmdc:mga06r32_128174_c1_910_1881 323
216 3300050510 nmdc:mga06r32_33774_c1 nmdc:mga06r32_33774_c1_311_1282 323
217 3300050510 nmdc:mga06r32_64008_c1 nmdc:mga06r32_64008_c1_185_1156 323
218 3300050510 nmdc:mga06r32_65973_c1 nmdc:mga06r32_65973_c1_1762_2733 323
219 3300050511 nmdc:mga08y16_102560_c1 nmdc:mga08y16_102560_c1_1440_2411 323
220 3300050511 nmdc:mga08y16_102560_c1 nmdc:mga08y16_102560_c1_403_1374 323
221 3300050511 nmdc:mga08y16_130148_c1 nmdc:mga08y16_130148_c1_821_1879 323
222 3300050511 nmdc:mga08y16_281979_c1 nmdc:mga08y16_281979_c1_693_1664 323
223 3300050512 nmdc:mga0n895_2879_c1 nmdc:mga0n895_2879_c1_4514_5485 323
224 3300050512 nmdc:mga0n895_518243_c1 nmdc:mga0n895_518243_c1_143_1114 323
225 3300050513 nmdc:mga0rr50_332598_c1 nmdc:mga0rr50_332598_c1_166_1137 323
226 3300050515 nmdc:mga0a205_125655_c1 nmdc:mga0a205_125655_c1_419_1453 323
227 3300050515 nmdc:mga0a205_144538_c1 nmdc:mga0a205_144538_c1_108_1079 323
228 3300050515 nmdc:mga0a205_51183_c1 nmdc:mga0a205_51183_c1_1514_2485 323
229 3300053085 Ga0495619_0082190 Ga0495619_0082190_961_1932 323
230 3300053088 Ga0500644_0001039 Ga0500644_0001039_2859_3851 323

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03401

TctC

Tripartite tricarboxylate transporter family receptor

78

349

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2dvz-assembly1.cif.gz_A structure of a periplasmic transporter 0.9617 28 323
5oku-assembly1.cif.gz_A r. palustris rpa4515 with adipate 0.9608 29 321
8hkb-assembly1.cif.gz_A tpa bound-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis mutant k184d 0.9482 33 323
2dvz-assembly1.cif.gz_A structure of a periplasmic transporter 0.9462 28 323
5oku-assembly1.cif.gz_A r. palustris rpa4515 with adipate 0.939 29 321
ID Description Score Start End Superfamily
4x9tA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9385 129 243 3.40.190.10
2dvzA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9334 28 323 3.40.190.150
2dvzA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9282 28 323 3.40.190.150
6hkeC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9196 130 248 3.40.190.10
2f5xC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9114 130 248 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A1F4DIF3-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9698 123 323
AF-A0A4Q2L567-F1-model_v4 deleted 0.9684 66 217
AF-A0A536XGM1-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9679 30 323
AF-A0A4Q7NH98-F1-model_v4 Tripartite-type tricarboxylate transporter receptor subunit TctC 0.9675 26 323
AF-A0A1F4DUM6-F1-model_v4 ABC transporter substrate-binding protein 0.967 24 323

Feature Viewer

pLDDT pTM Quality
90.04 0.85 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map