F343483

General Info

Members Datasets Scaffolds Average Seq Length
230 169 452 332

Family's Representative Sequence

Representative Sequence 3300049823|Ga0501044_0283399|Ga0501044_0283399_365_1537
Length 390
Sequence MSELLCLHEVWIIPAIPVARRPSPAGAGGTPPGHSRWIDDEDYECKAKGEMTNNPYFLPTRSADRVVLFAAFPGMCLLDLAGPHTVFWAASQAGRLRGLPGYRCHTVSIGGGSIRAAEGVVLETEPAADFDARTVDTVMVPGSFGILDVIDQSDSLVDWLRQVAPRTRRMTSVCTGAFLLAEAGLLRGKRAATHWMECERFQKRFTDVAIDSDAIFVQDDPIWTSAGVTACIDLSLALVQADCGREIAMEVARELVVFLKRPGGQSQFSQFLKAQEQDRGAFEELHLWLSDNLSRTGLNVDVMAERANMSPRNFARQYKKETGRTPARALELLRLEAAKRMLEDSHRSVKQIANVCGFGSEGRMRATFLRHLAATPRDIRERFSNRAPSA

Samples

Sample ID Description Type Environment
1 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
5 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
6 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
7 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
8 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
9 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
10 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
11 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
12 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
13 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
14 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
15 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
19 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
20 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
21 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
22 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
23 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
24 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
25 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
26 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
27 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
28 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
29 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
30 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
37 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
38 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
40 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
41 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
42 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
43 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
44 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
45 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
46 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
47 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
51 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
52 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
53 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
54 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
55 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
56 3300042142 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_072516_1610 Metagenome Rhizosphere
57 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
58 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
59 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
60 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
61 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
62 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
63 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
64 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
65 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
66 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
67 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
68 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
69 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
70 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
71 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
72 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
73 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
74 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
75 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
76 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
77 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
78 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
79 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
80 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
81 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
82 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
83 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
84 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
85 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
86 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
87 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
88 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
89 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
90 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
91 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
92 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
93 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
94 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
95 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
96 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
97 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
98 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
99 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
100 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
101 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
102 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
103 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
104 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
105 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
106 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
107 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
108 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
109 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
110 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
111 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
112 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
113 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
114 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
115 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
116 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
117 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
118 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
119 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
120 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
121 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
122 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
123 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
124 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
125 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
126 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
127 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
128 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
129 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
130 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
131 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
132 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
133 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
134 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
139 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
140 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
141 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
142 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
143 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
144 2511231011 Pseudomonas sp. GM30 Isolate Nodule
145 2597489888 Pseudomonas fluorescens SS101 Isolate Rhizosphere
146 2597489889 Pseudomonas synxantha BG33R Isolate Rhizosphere
147 2599185189 Pseudomonas sp. NFPP02 Isolate Rhizoplane
148 2600254954 Pseudomonas sp. NFACC19-2 Isolate Rhizoplane
149 2600255296 Pseudomonas sp. NFR02 Isolate Rhizoplane
150 2600255389 Pseudomonas sp. NFPP33 Isolate Rhizoplane
151 2643221645 Massilia sp. Root351 Isolate Unclassified
152 2643221664 Massilia sp. Root418 Isolate Unclassified
153 2721755607 Pseudomonas fluorescens Pt14 Isolate Rhizosphere
154 2738541300 Massilia sp. GV016 Isolate Unclassified
155 2738543015 Pseudomonas sp. GV041 Isolate Unclassified
156 2738543018 Massilia sp. GV045 Isolate Unclassified
157 2738543030 Massilia sp. GV097 Isolate Unclassified
158 2773857673 Pseudomonas sp. 443 Isolate Unclassified
159 2806310737 Pseudomonas mosselii BS011 Isolate Unclassified
160 2806310745 Pseudomonas mosselii PtA1 Isolate Unclassified
161 2842826826 Pseudomonas sp. R-72172 Isolate Unclassified
162 2842837860 Pseudomonas sp. R-72102 Isolate Unclassified
163 2904518522 Pseudomonas fluorescens 4488 Isolate Rhizosphere
164 2912963787 Pseudomonas sp. R32 Isolate Rhizosphere
165 2939651529 Pseudomonas sp. 2835 Isolate Rhizosphere
166 2974289157 Pseudomonas fluorescens SORGH_AS 191 Isolate Unclassified
167 8054347763 Pseudomonas carnis NWU Be30 Isolate Unclassified
168 8056148874 Pseudomonas khavaziana SWRI124 Isolate Rhizosphere
169 8056166840 Pseudomonas triticicola SWRI88 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.7
Metatranscriptomes 0
Isolates 11.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.61
Nodule 0.87
Rhizoplane 3.48
Rhizosphere 61.74
Stem 0
Stem Tuber 0
Unclassified 0.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501044_0283399 3300049823 Bacteria 1590
2 JGI25156J39149_1000017 3300002705 Bacteria 171827
3 JGI25153J46596_10029943 3300003215 Bacteria 1861
4 Ga0055538_1000202 3300003751 Bacteria 35448
5 Ga0055539_1000243 3300003752 Bacteria 35448
6 Ga0055533_1000238 3300003756 Bacteria 35448
7 Ga0055532_1000259 3300003758 Bacteria 35444
8 Ga0055525_1000332 3300003759 Bacteria 35448
9 Ga0055535_1006358 3300003761 Bacteria 2401
10 Ga0055526_1000706 3300003771 Bacteria 25285
11 Ga0055537_1000382 3300003773 Bacteria 29844
12 Ga0055524_1004756 3300003775 Bacteria 6200
13 Ga0055534_1000009 3300003784 Bacteria 210256
14 Ga0055528_1000012 3300003790 Bacteria 182704
15 Ga0055541_1000146 3300003841 Bacteria 35448
16 Ga0070705_100107239 3300005440 Bacteria 1777
17 Ga0070707_100385704 3300005468 Bacteria 1361
18 Ga0070695_100021937 3300005545 Bacteria 3913
19 Ga0075434_100002847 3300006871 Bacteria 15336
20 Ga0075435_100432382 3300007076 Bacteria 1134
21 Ga0105251_10010457 3300009011 Bacteria 5382
22 Ga0105244_10002992 3300009036 Bacteria 12416
23 Ga0105244_10016007 3300009036 Bacteria 4285
24 Ga0157373_10010328 3300013100 Bacteria 6875
25 Ga0157373_10052604 3300013100 Bacteria 2897
26 Ga0157371_10000209 3300013102 Bacteria 85823
27 Ga0157371_10007763 3300013102 Bacteria 8626
28 Ga0157370_10080115 3300013104 Bacteria 3075
29 Ga0157370_10236459 3300013104 Bacteria 1691
30 Ga0157372_10003345 3300013307 Bacteria 17313
31 Ga0182006_1000777 3300015261 Bacteria 21606
32 Ga0163161_10001944 3300017792 Bacteria 15070
33 Ga0163161_10005461 3300017792 Bacteria 8824
34 Ga0213876_10115074 3300021384 Bacteria 1427
35 Ga0213876_10127477 3300021384 Bacteria 1352
36 Ga0209784_100241 3300025224 Bacteria 35519
37 Ga0209566_100390 3300025225 Bacteria 35519
38 Ga0209674_100293 3300025226 Bacteria 35519
39 Ga0209147_100332 3300025229 Bacteria 35519
40 Ga0209563_100188 3300025230 Bacteria 35519
41 Ga0209258_100508 3300025242 Bacteria 37664
42 Ga0207425_1000455 3300025245 Bacteria 26503
43 Ga0209646_1000427 3300025246 Bacteria 23350
44 Ga0209677_100266 3300025253 Bacteria 35519
45 Ga0209759_1000002 3300025256 Bacteria 1027596
46 Ga0209565_1000015 3300025263 Bacteria 494091
47 Ga0209673_1000017 3300025273 Bacteria 492994
48 Ga0209675_1000012 3300025291 Bacteria 494061
49 Ga0209025_1002209 3300025294 Bacteria 21508
50 Ga0209564_1000016 3300025295 Bacteria 613131
51 Ga0209758_1000286 3300025297 Bacteria 99636
52 Ga0209256_1000314 3300025299 Bacteria 84164
53 Ga0207655_1001278 3300025728 Bacteria 24014
54 Ga0207713_1035150 3300025735 Bacteria 2166
55 Ga0207646_10096424 3300025922 Bacteria 2650
56 Ga0209281_1012360 3300027111 Bacteria 1877
57 Ga0207428_10009833 3300027907 Bacteria 8569
58 Ga0265320_10060587 3300031240 Bacteria 1806
59 Ga0265313_10068187 3300031595 Bacteria 1644
60 Ga0436365_0010736 3300039437 Bacteria 1271
61 Ga0436365_0393531 3300039437 Bacteria 2302
62 Ga0450903_002560 3300042138 Bacteria 3225
63 Ga0450905_001425 3300042142 Bacteria 3053
64 Ga0450901_000067 3300042533 Bacteria 10577
65 Ga0451577_0008379 3300042876 Bacteria 10061
66 Ga0453683_0003302 3300044673 Bacteria 11939
67 Ga0451576_0016696 3300045051 Bacteria 8097
68 Ga0451576_0020936 3300045051 Bacteria 7117
69 Ga0451576_0350828 3300045051 Unclassified 1545
70 Ga0495617_002410 3300046452 Bacteria 7442
71 Ga0495603_0128161 3300046455 Bacteria 1478
72 Ga0495603_0168725 3300046455 Bacteria 1268
73 Ga0495591_000054 3300046458 Bacteria 135364
74 Ga0495629_0000018 3300046459 Bacteria 169239
75 Ga0495629_0007069 3300046459 Bacteria 8270
76 Ga0495638_0005861 3300046460 Bacteria 9035
77 Ga0495650_0001581 3300046471 Bacteria 21346
78 Ga0495582_0044176 3300046473 Bacteria 2454
79 Ga0495605_0001208 3300046474 Bacteria 17222
80 Ga0495639_0003233 3300046475 Bacteria 7077
81 Ga0495639_0015344 3300046475 Bacteria 3322
82 Ga0495584_0000453 3300046491 Bacteria 28258
83 Ga0495585_0057727 3300046492 Bacteria 2141
84 Ga0495594_0003862 3300046499 Bacteria 7700
85 Ga0495607_0004671 3300046501 Bacteria 10023
86 Ga0495607_0005137 3300046501 Bacteria 9453
87 Ga0495607_0048214 3300046501 Bacteria 2492
88 Ga0495583_0000067 3300046506 Bacteria 189381
89 Ga0495583_0011961 3300046506 Bacteria 4948
90 Ga0495606_0022610 3300046507 Bacteria 4575
91 Ga0495610_0003875 3300046512 Bacteria 11364
92 Ga0495610_0006343 3300046512 Bacteria 8173
93 Ga0495616_0003683 3300046513 Bacteria 9785
94 Ga0495618_0000447 3300046514 Bacteria 29662
95 Ga0495620_0000614 3300046515 Bacteria 22291
96 Ga0495637_0001395 3300046520 Bacteria 14390
97 Ga0495637_0005731 3300046520 Bacteria 6295
98 Ga0495643_0000194 3300046522 Bacteria 96362
99 Ga0495644_0000836 3300046523 Bacteria 12679
100 Ga0495644_0002359 3300046523 Bacteria 7524
101 Ga0495644_0012110 3300046523 Bacteria 3316
102 Ga0495648_0000296 3300046524 Bacteria 55214
103 Ga0495586_0002523 3300046535 Bacteria 9920
104 Ga0495609_0000341 3300046538 Bacteria 41407
105 Ga0495609_0000782 3300046538 Bacteria 23766
106 Ga0495609_0001648 3300046538 Bacteria 14549
107 Ga0495609_0008463 3300046538 Bacteria 5039
108 Ga0495609_0062191 3300046538 Bacteria 1649
109 Ga0495597_0001756 3300046542 Bacteria 14923
110 Ga0495622_0010139 3300046557 Bacteria 4358
111 Ga0495633_0003681 3300046558 Bacteria 10123
112 Ga0495633_0024890 3300046558 Bacteria 2953
113 Ga0495656_0036637 3300046615 Bacteria 2021
114 Ga0495668_0007137 3300046616 Bacteria 7192
115 Ga0495634_0007294 3300046642 Bacteria 8324
116 Ga0495611_0003652 3300046648 Bacteria 6747
117 Ga0495625_0015544 3300046660 Bacteria 6025
118 Ga0495625_0106184 3300046660 Bacteria 1923
119 Ga0495635_0000125 3300046663 Bacteria 46658
120 Ga0495659_0000087 3300046664 Bacteria 40627
121 Ga0495659_0000473 3300046664 Bacteria 14846
122 Ga0495647_0001735 3300046681 Bacteria 6763
123 Ga0495658_0000041 3300046683 Bacteria 64822
124 Ga0495658_0022142 3300046683 Bacteria 3358
125 Ga0495669_0001204 3300046684 Bacteria 10760
126 Ga0495613_0000734 3300046689 Bacteria 25711
127 Ga0495670_0001046 3300046691 Bacteria 13385
128 Ga0495670_0037992 3300046691 Unclassified 2400
129 Ga0495671_0001947 3300046692 Bacteria 13246
130 Ga0495671_0004481 3300046692 Bacteria 8344
131 Ga0495671_0013757 3300046692 Bacteria 4370
132 Ga0495671_0030591 3300046692 Bacteria 2756
133 Ga0495649_0093575 3300046694 Bacteria 1600
134 Ga0495660_0001071 3300046810 Bacteria 19711
135 Ga0495660_0072286 3300046810 Bacteria 1827
136 Ga0495581_0000066 3300047315 Bacteria 40818
137 Ga0495581_0117469 3300047315 Bacteria 1547
138 Ga0495636_0001490 3300047318 Bacteria 8873
139 Ga0495672_0000170 3300047320 Bacteria 94669
140 Ga0495672_0016770 3300047320 Bacteria 4917
141 Ga0495672_0021180 3300047320 Bacteria 4244
142 Ga0495672_0025583 3300047320 Bacteria 3773
143 Ga0495676_0036956 3300047321 Bacteria 4072
144 Ga0495676_0040933 3300047321 Bacteria 3820
145 Ga0495680_0000627 3300047322 Bacteria 39683
146 Ga0495683_0001131 3300047323 Bacteria 18369
147 Ga0495687_000479 3300047443 Bacteria 48416
148 Ga0495677_0004507 3300047445 Bacteria 5334
149 Ga0495677_0005398 3300047445 Bacteria 4849
150 Ga0495677_0038800 3300047445 Bacteria 1740
151 Ga0495685_001821 3300047447 Bacteria 6574
152 Ga0495685_040910 3300047447 Bacteria 1584
153 Ga0495673_0000711 3300047469 Bacteria 32279
154 Ga0495673_0008014 3300047469 Bacteria 5986
155 Ga0495681_0008197 3300047470 Bacteria 6573
156 Ga0495686_0010987 3300047472 Bacteria 6405
157 Ga0495614_0000647 3300048089 Bacteria 14584
158 Ga0495626_0000083 3300048091 Bacteria 127169
159 Ga0496100_0277643 3300048903 Bacteria 1248
160 Ga0496102_0057795 3300048905 Bacteria 3543
161 Ga0496103_0146895 3300048906 Bacteria 1509
162 Ga0496106_0001900 3300048909 Bacteria 15639
163 Ga0496116_0001983 3300048919 Bacteria 22047
164 Ga0496116_0006201 3300048919 Bacteria 10921
165 Ga0496117_0000373 3300048920 Bacteria 77595
166 Ga0496117_0006024 3300048920 Bacteria 12462
167 Ga0496118_0000021 3300048921 Bacteria 444988
168 Ga0496118_0006769 3300048921 Bacteria 12462
169 Ga0496119_0005268 3300048922 Bacteria 12467
170 Ga0496119_0192567 3300048922 Bacteria 1061
171 Ga0496120_0003870 3300048923 Bacteria 13135
172 Ga0496120_0005843 3300048923 Bacteria 9626
173 Ga0496121_0003639 3300048924 Bacteria 21701
174 Ga0496121_0005633 3300048924 Bacteria 15942
175 Ga0496121_0020632 3300048924 Bacteria 6506
176 Ga0496122_0014887 3300048925 Bacteria 7488
177 Ga0496122_0049378 3300048925 Bacteria 3223
178 Ga0496123_0002555 3300048926 Bacteria 22171
179 Ga0496123_0021073 3300048926 Bacteria 5078
180 Ga0496124_0000569 3300048927 Bacteria 62485
181 Ga0496124_0004370 3300048927 Bacteria 16535
182 Ga0496124_0004449 3300048927 Bacteria 16342
183 Ga0496124_0014457 3300048927 Bacteria 7632
184 Ga0496124_0056245 3300048927 Bacteria 3319
185 Ga0496125_0002882 3300048928 Bacteria 21651
186 Ga0496126_0002364 3300048929 Bacteria 25741
187 Ga0496126_0042161 3300048929 Bacteria 4216
188 Ga0495678_000602 3300049459 Bacteria 33862
189 Ga0495678_001345 3300049459 Bacteria 19670
190 Ga0495682_0009634 3300049460 Bacteria 3765
191 Ga0501034_0054333 3300049571 Bacteria 4032
192 Ga0501037_0063320 3300049573 Bacteria 2696
193 Ga0501047_0157126 3300049581 Bacteria 2147
194 Ga0501070_0130431 3300049586 Bacteria 2077
195 Ga0501073_0088609 3300049589 Bacteria 2152
196 Ga0501080_0094373 3300049742 Bacteria 2778
197 Ga0501044_0001250 3300049823 Bacteria 30155
198 Ga0495619_0000673 3300053085 Bacteria 22386
199 Ga0500655_003973 3300053133 Bacteria 2664
200 Ga0501082_0098516 3300060353 Bacteria 2528
201 2511298478 2511231011 Bacteria 6149768
202 2597864460 2597489888 Bacteria 6179543
203 2597870272 2597489889 Bacteria 6297495
204 2599506674 2599185189 Bacteria 5862825
205 2600442284 2600254954 Bacteria 5100516
206 2601690314 2600255296 Bacteria 5784754
207 2602009746 2600255389 Bacteria 5275336
208 2644250369 2643221645 Bacteria 7207331
209 2644357636 2643221664 Bacteria 7272945
210 2723249163 2721755607 Bacteria 5841722
211 2738844040 2738541300 Bacteria 6675882
212 2739258079 2738543015 Bacteria 6750701
213 2739274396 2738543018 Bacteria 6718814
214 2739343440 2738543030 Bacteria 6719714
215 2774138127 2773857673 Bacteria 6513460
216 2807407862 2806310737 Bacteria 5751088
217 2807456165 2806310745 Bacteria 5742165
218 2842830319 2842826826 Bacteria 5974129
219 2842841911 2842837860 Bacteria 6066181
220 2904521953 2904518522 Bacteria 6068986
221 2912965913 2912963787 Bacteria 5646108
222 2939653615 2939651529 Bacteria 5895393
223 2974291486 2974289157 Bacteria 6080362
224 8054347873 8054347763 Bacteria 5901107
225 8056154209 8056148874 Bacteria 6479865
226 8056168796 8056166840 Bacteria 5820959
227 Ga0501044_0283399
228 JGI25156J39149_1000017
229 JGI25153J46596_10029943
230 Ga0055538_1000202
231 Ga0055539_1000243
232 Ga0055533_1000238
233 Ga0055532_1000259
234 Ga0055525_1000332
235 Ga0055535_1006358
236 Ga0055526_1000706
237 Ga0055537_1000382
238 Ga0055524_1004756
239 Ga0055534_1000009
240 Ga0055528_1000012
241 Ga0055541_1000146
242 Ga0070705_100107239
243 Ga0070707_100385704
244 Ga0070695_100021937
245 Ga0075434_100002847
246 Ga0075435_100432382
247 Ga0105251_10010457
248 Ga0105244_10002992
249 Ga0105244_10016007
250 Ga0157373_10010328
251 Ga0157373_10052604
252 Ga0157371_10000209
253 Ga0157371_10007763
254 Ga0157370_10080115
255 Ga0157370_10236459
256 Ga0157372_10003345
257 Ga0182006_1000777
258 Ga0163161_10001944
259 Ga0163161_10005461
260 Ga0213876_10115074
261 Ga0213876_10127477
262 Ga0209784_100241
263 Ga0209566_100390
264 Ga0209674_100293
265 Ga0209147_100332
266 Ga0209563_100188
267 Ga0209258_100508
268 Ga0207425_1000455
269 Ga0209646_1000427
270 Ga0209677_100266
271 Ga0209759_1000002
272 Ga0209565_1000015
273 Ga0209673_1000017
274 Ga0209675_1000012
275 Ga0209025_1002209
276 Ga0209564_1000016
277 Ga0209758_1000286
278 Ga0209256_1000314
279 Ga0207655_1001278
280 Ga0207713_1035150
281 Ga0207646_10096424
282 Ga0209281_1012360
283 Ga0207428_10009833
284 Ga0265320_10060587
285 Ga0265313_10068187
286 Ga0436365_0010736
287 Ga0436365_0393531
288 Ga0450903_002560
289 Ga0450905_001425
290 Ga0450901_000067
291 Ga0451577_0008379
292 Ga0453683_0003302
293 Ga0451576_0016696
294 Ga0451576_0020936
295 Ga0451576_0350828
296 Ga0495617_002410
297 Ga0495603_0128161
298 Ga0495603_0168725
299 Ga0495591_000054
300 Ga0495629_0000018
301 Ga0495629_0007069
302 Ga0495638_0005861
303 Ga0495650_0001581
304 Ga0495582_0044176
305 Ga0495605_0001208
306 Ga0495639_0003233
307 Ga0495639_0015344
308 Ga0495584_0000453
309 Ga0495585_0057727
310 Ga0495594_0003862
311 Ga0495607_0004671
312 Ga0495607_0005137
313 Ga0495607_0048214
314 Ga0495583_0000067
315 Ga0495583_0011961
316 Ga0495606_0022610
317 Ga0495610_0003875
318 Ga0495610_0006343
319 Ga0495616_0003683
320 Ga0495618_0000447
321 Ga0495620_0000614
322 Ga0495637_0001395
323 Ga0495637_0005731
324 Ga0495643_0000194
325 Ga0495644_0000836
326 Ga0495644_0002359
327 Ga0495644_0012110
328 Ga0495648_0000296
329 Ga0495586_0002523
330 Ga0495609_0000341
331 Ga0495609_0000782
332 Ga0495609_0001648
333 Ga0495609_0008463
334 Ga0495609_0062191
335 Ga0495597_0001756
336 Ga0495622_0010139
337 Ga0495633_0003681
338 Ga0495633_0024890
339 Ga0495656_0036637
340 Ga0495668_0007137
341 Ga0495634_0007294
342 Ga0495611_0003652
343 Ga0495625_0015544
344 Ga0495625_0106184
345 Ga0495635_0000125
346 Ga0495659_0000087
347 Ga0495659_0000473
348 Ga0495647_0001735
349 Ga0495658_0000041
350 Ga0495658_0022142
351 Ga0495669_0001204
352 Ga0495613_0000734
353 Ga0495670_0001046
354 Ga0495670_0037992
355 Ga0495671_0001947
356 Ga0495671_0004481
357 Ga0495671_0013757
358 Ga0495671_0030591
359 Ga0495649_0093575
360 Ga0495660_0001071
361 Ga0495660_0072286
362 Ga0495581_0000066
363 Ga0495581_0117469
364 Ga0495636_0001490
365 Ga0495672_0000170
366 Ga0495672_0016770
367 Ga0495672_0021180
368 Ga0495672_0025583
369 Ga0495676_0036956
370 Ga0495676_0040933
371 Ga0495680_0000627
372 Ga0495683_0001131
373 Ga0495687_000479
374 Ga0495677_0004507
375 Ga0495677_0005398
376 Ga0495677_0038800
377 Ga0495685_001821
378 Ga0495685_040910
379 Ga0495673_0000711
380 Ga0495673_0008014
381 Ga0495681_0008197
382 Ga0495686_0010987
383 Ga0495614_0000647
384 Ga0495626_0000083
385 Ga0496100_0277643
386 Ga0496102_0057795
387 Ga0496103_0146895
388 Ga0496106_0001900
389 Ga0496116_0001983
390 Ga0496116_0006201
391 Ga0496117_0000373
392 Ga0496117_0006024
393 Ga0496118_0000021
394 Ga0496118_0006769
395 Ga0496119_0005268
396 Ga0496119_0192567
397 Ga0496120_0003870
398 Ga0496120_0005843
399 Ga0496121_0003639
400 Ga0496121_0005633
401 Ga0496121_0020632
402 Ga0496122_0014887
403 Ga0496122_0049378
404 Ga0496123_0002555
405 Ga0496123_0021073
406 Ga0496124_0000569
407 Ga0496124_0004370
408 Ga0496124_0004449
409 Ga0496124_0014457
410 Ga0496124_0056245
411 Ga0496125_0002882
412 Ga0496126_0002364
413 Ga0496126_0042161
414 Ga0495678_000602
415 Ga0495678_001345
416 Ga0495682_0009634
417 Ga0501034_0054333
418 Ga0501037_0063320
419 Ga0501047_0157126
420 Ga0501070_0130431
421 Ga0501073_0088609
422 Ga0501080_0094373
423 Ga0501044_0001250
424 Ga0495619_0000673
425 Ga0500655_003973
426 Ga0501082_0098516
427 2511298478
428 2597864460
429 2597870272
430 2599506674
431 2600442284
432 2601690314
433 2602009746
434 2644250369
435 2644357636
436 2723249163
437 2738844040
438 2739258079
439 2739274396
440 2739343440
441 2774138127
442 2807407862
443 2807456165
444 2842830319
445 2842841911
446 2904521953
447 2912965913
448 2939653615
449 2974291486
450 8054347873
451 8056154209
452 8056168796

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12833

HTH_18

Helix-turn-helix domain

303

382

0.97

PF01965

DJ-1_PfpI

DJ-1/PfpI family

64

241

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3w6v-assembly1.cif.gz_A crystal structure of the dna-binding domain of adpa, the global transcriptional factor, in complex with a target dna 0.9588 211 315
6swi-assembly1.cif.gz_A the c-terminal domain of arat, a response regulator from geobacillus stearothermophilus 0.9438 211 313
3lsg-assembly1.cif.gz_A the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.9423 215 311
3mgk-assembly1.cif.gz_A crystal structure of probable protease/amidase from clostridium acetobutylicum atcc 824 0.9418 5 186
3lsg-assembly3.cif.gz_E the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.9127 215 306
ID Description Score Start End Superfamily
3w6vA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9588 211 315 1.10.10.60
1d5yD02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9568 265 312 1.10.10.60
af_P31449_179_288_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9472 213 316 1.10.10.60
af_P77379_178_282_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9449 214 315 1.10.10.60
3mgkA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.9418 5 186 3.40.50.880
ID Description Score Start End GO Terms
AF-A0A7G8BCW5-F1-model_v4 Helix-turn-helix domain-containing protein 0.9602 213 314 GO:0003700
GO:0043565
AF-A0A2N5N8U1-F1-model_v4 ADA regulatory protein (EC 2.1.1.63) 0.9595 214 314 GO:0003700
GO:0003908
GO:0006281
GO:0008270
GO:0032259
GO:0043565
AF-A0A484XH48-F1-model_v4 AraC family transcriptional regulator 0.9575 213 314 GO:0003700
GO:0043565
AF-A0A258V5V2-F1-model_v4 HTH araC/xylS-type domain-containing protein 0.9564 213 315 GO:0003700
GO:0043565
AF-A0A3R8NBR2-F1-model_v4 AraC family transcriptional regulator 0.9564 213 314 GO:0003700
GO:0043565

Map