F343155

General Info

Members Datasets Scaffolds Average Seq Length
230 119 459 391

Family's Representative Sequence

Representative Sequence 3300031507|Ga0307509_10067220|Ga0307509_100672205
Length 438
Sequence MKFESAYIKRLVDAHMKDQLDEAGRQALQQWLAQSPDNQAWFDTITSEAGLAEAIRLYNSYDTDAMLEKLNGNGDVKHEAPPVVHLYKSRRKRNWYFMAASLTLFLVVSVLYVYFSRPGKQTVAGVIPDKSGRFKNDVPAPDRSHATLVLDDGTSIVLDSASDGRLVQQGNTNVVKNNSRLVYETGSGAGAQPAALAYNTVSTPRGGQYQIVLPDGTKVWLDAASSLRFPTAFTGAERKVFVTGQVYFEVATNKAKPFIVSLPSIGQREAQSGEIEVLGTNFNINAYNDEANIKTTLLEGSIRLVAVTLSSARPEPAEGSKGPSTINQQPSTLLSPHQQAILSPLGRVSVAPDPDIEATMAWKNGQFRFNGDAPLEVIMAQVARWYDVEVVFKNKVSYPFVATINRNLPLSELLKLLEMTGLVRFEIEGKKVTVMKGM

Samples

Sample ID Description Type Environment
1 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
9 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
10 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
23 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
34 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
38 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
39 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
40 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
41 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
44 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
62 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
63 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
64 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
65 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
66 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
67 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
68 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
69 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
70 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
71 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
72 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
73 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
74 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
75 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
76 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
77 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
78 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
79 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
80 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
81 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
82 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
83 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
84 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
85 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
86 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
87 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
88 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
89 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
90 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
91 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
92 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
93 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
94 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
95 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
96 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
97 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
98 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
99 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
100 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
101 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
102 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
103 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
104 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
105 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
106 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
107 2738541283 Pedobacter sp. OK701 Isolate Unclassified
108 2738543023 Pedobacter sp. OK628 Isolate Unclassified
109 2739367656 Pedobacter sp. CF523 Isolate Unclassified
110 2818991444 Filimonas endophytica 3197 Isolate Unclassified
111 2887375801 Parapusillimonas sp. SGNA-6 Isolate Rhizosphere
112 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
113 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
114 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
115 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
116 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
117 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
118 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
119 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.17
Metatranscriptomes 0
Isolates 7.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.35
Nodule 0
Rhizoplane 0.43
Rhizosphere 68.26
Stem 0
Stem Tuber 0
Unclassified 6.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307509_10067220 3300031507 Bacteria 3756
2 JGI24739J22299_10001206 3300001989 Bacteria 9682
3 JGI24737J22298_10004371 3300001990 Bacteria 4931
4 rootH1_10064271 3300003316 Bacteria 11786
5 rootH2_10175917 3300003320 Bacteria 3642
6 rootL2_10215602 3300003322 Bacteria 2581
7 rootL2_10251599 3300003322 Unclassified 2045
8 rootL2_10295282 3300003322 Bacteria 10401
9 rootH1_10050286 3300003316 Bacteria 1780
10 rootH1_10050286 3300003323 Bacteria 7955
11 rootH1_10195271 3300003323 Bacteria 2231
12 rootH1_10243654 3300003323 Bacteria 3699
13 rootH1_10353340 3300003323 Bacteria 2615
14 Ga0055535_1003303 3300003761 Bacteria 4663
15 Ga0055542_1003008 3300003762 Bacteria 4904
16 Ga0065714_10003235 3300005288 Bacteria 8728
17 Ga0065714_10003296 3300005288 Bacteria 10019
18 Ga0068868_100031980 3300005338 Bacteria 4045
19 Ga0068868_100043599 3300005338 Bacteria 3504
20 Ga0070660_100029460 3300005339 Bacteria 4114
21 Ga0070659_100000225 3300005366 Bacteria 43770
22 Ga0070662_100000845 3300005457 Bacteria 18821
23 Ga0068853_100001745 3300005539 Bacteria 15947
24 Ga0068853_100110714 3300005539 Bacteria 2439
25 Ga0070665_100000001 3300005548 Bacteria 1083363
26 Ga0070665_100000013 3300005548 Bacteria 484927
27 Ga0070665_100000016 3300005548 Bacteria 451538
28 Ga0068855_100069261 3300005563 Bacteria 4106
29 Ga0068855_100110095 3300005563 Bacteria 3162
30 Ga0068854_100105392 3300005578 Bacteria 2119
31 Ga0068856_100030829 3300005614 Bacteria 5244
32 Ga0068856_100120774 3300005614 Bacteria 2622
33 Ga0068852_100000342 3300005616 Bacteria 31480
34 Ga0068860_100000006 3300005843 Bacteria 461966
35 Ga0068860_100001023 3300005843 Bacteria 30886
36 Ga0075366_10010114 3300006195 Bacteria 5289
37 Ga0068871_100109704 3300006358 Bacteria 2320
38 Ga0105240_10000185 3300009093 Bacteria 126364
39 Ga0105240_10001552 3300009093 Bacteria 38973
40 Ga0105240_10126258 3300009093 Bacteria 3074
41 Ga0105240_10324122 3300009093 Bacteria 1755
42 Ga0105245_10316703 3300009098 Unclassified 1536
43 Ga0105241_10000539 3300009174 Bacteria 28510
44 Ga0105241_10002545 3300009174 Bacteria 13686
45 Ga0105241_10101795 3300009174 Bacteria 2285
46 Ga0105237_10000028 3300009545 Bacteria 201366
47 Ga0105237_10000154 3300009545 Bacteria 96509
48 Ga0105237_10003101 3300009545 Bacteria 20020
49 Ga0105237_10007724 3300009545 Bacteria 11742
50 Ga0105237_10010370 3300009545 Bacteria 9919
51 Ga0105237_10024689 3300009545 Bacteria 6148
52 Ga0105237_10136271 3300009545 Bacteria 2449
53 Ga0105237_10285420 3300009545 Bacteria 1653
54 Ga0105238_10005818 3300009551 Bacteria 12206
55 Ga0105238_10009649 3300009551 Bacteria 9661
56 Ga0105239_10000433 3300010375 Bacteria 61072
57 Ga0105239_10000856 3300010375 Bacteria 43239
58 Ga0105239_10002174 3300010375 Bacteria 25192
59 Ga0105239_10011119 3300010375 Bacteria 10046
60 Ga0105239_10346652 3300010375 Bacteria 1677
61 Ga0157371_10001565 3300013102 Bacteria 23529
62 Ga0157370_10002041 3300013104 Bacteria 24796
63 Ga0157370_10023478 3300013104 Bacteria 6121
64 Ga0157370_10044844 3300013104 Unclassified 4246
65 Ga0157370_10096535 3300013104 Bacteria 2773
66 Ga0157369_10018537 3300013105 Bacteria 7802
67 Ga0157369_10041375 3300013105 Bacteria 5030
68 Ga0157374_10000366 3300013296 Bacteria 41686
69 Ga0163162_10000468 3300013306 Bacteria 37483
70 Ga0163162_10015832 3300013306 Bacteria 7369
71 Ga0163162_10017435 3300013306 Bacteria 7026
72 Ga0163162_10487127 3300013306 Unclassified 1364
73 Ga0157372_10000954 3300013307 Bacteria 31547
74 Ga0157372_10021349 3300013307 Bacteria 6995
75 Ga0157372_10119601 3300013307 Bacteria 3024
76 Ga0163163_10020643 3300014325 Bacteria 6208
77 Ga0182008_10000024 3300014497 Bacteria 199978
78 Ga0157377_10014680 3300014745 Bacteria 3989
79 Ga0182006_1004667 3300015261 Bacteria 6710
80 Ga0163161_10000336 3300017792 Bacteria 40076
81 Ga0209258_100161 3300025242 Bacteria 151992
82 Ga0209148_1000161 3300025254 Bacteria 138759
83 Ga0209233_1012687 3300025261 Bacteria 2434
84 Ga0209455_1001478 3300025272 Bacteria 10569
85 Ga0207647_10000027 3300025904 Bacteria 109872
86 Ga0207647_10043146 3300025904 Bacteria 2823
87 Ga0207654_10036291 3300025911 Bacteria 2753
88 Ga0207695_10000117 3300025913 Bacteria 237982
89 Ga0207695_10000878 3300025913 Bacteria 54720
90 Ga0207695_10051499 3300025913 Unclassified 4323
91 Ga0207695_10130531 3300025913 Bacteria 2471
92 Ga0207671_10000185 3300025914 Bacteria 95649
93 Ga0207671_10002873 3300025914 Bacteria 17860
94 Ga0207671_10005087 3300025914 Bacteria 12274
95 Ga0207671_10007021 3300025914 Bacteria 9867
96 Ga0207671_10018729 3300025914 Bacteria 5306
97 Ga0207671_10044419 3300025914 Bacteria 3286
98 Ga0207694_10005149 3300025924 Bacteria 10091
99 Ga0207690_10159095 3300025932 Bacteria 1682
100 Ga0207706_10000010 3300025933 Bacteria 200039
101 Ga0207667_10003451 3300025949 Bacteria 19512
102 Ga0207667_10075793 3300025949 Bacteria 3492
103 Ga0207667_10229720 3300025949 Bacteria 1900
104 Ga0207640_10003410 3300025981 Bacteria 8555
105 Ga0207677_10019970 3300026023 Bacteria 4058
106 Ga0207677_10028921 3300026023 Bacteria 3514
107 Ga0207639_10241740 3300026041 Bacteria 1570
108 Ga0207639_10259149 3300026041 Bacteria 1520
109 Ga0207702_10030254 3300026078 Bacteria 4512
110 Ga0207702_10166261 3300026078 Bacteria 2018
111 Ga0207674_10012189 3300026116 Bacteria 9617
112 Ga0207674_10072436 3300026116 Bacteria 3461
113 Ga0207698_10003451 3300026142 Bacteria 9518
114 Ga0207698_10034059 3300026142 Bacteria 3709
115 Ga0207698_10054027 3300026142 Unclassified 3088
116 Ga0268266_10000024 3300028379 Bacteria 490820
117 Ga0268266_10000038 3300028379 Bacteria 325729
118 Ga0268264_10000064 3300028381 Bacteria 301274
119 Ga0268264_10004582 3300028381 Bacteria 11756
120 Ga0307515_10000226 3300028794 Bacteria 139533
121 Ga0307515_10000523 3300028794 Bacteria 91316
122 Ga0307515_10006449 3300028794 Bacteria 23470
123 Ga0307511_10000042 3300030521 Bacteria 102114
124 Ga0307511_10000151 3300030521 Bacteria 66032
125 Ga0307511_10003492 3300030521 Bacteria 16158
126 Ga0307513_10098496 3300031456 Unclassified 2955
127 Ga0307509_10171988 3300031507 Unclassified 2044
128 Ga0307509_10177384 3300031507 Bacteria 2001
129 Ga0307508_10001161 3300031616 Bacteria 30284
130 Ga0307508_10002709 3300031616 Bacteria 18529
131 Ga0307508_10072756 3300031616 Bacteria 3012
132 Ga0307516_10010103 3300031730 Bacteria 10434
133 Ga0307516_10166054 3300031730 Bacteria 1952
134 Ga0307507_10000023 3300033179 Bacteria 212423
135 Ga0439436_0019595 3300041404 Bacteria 2019
136 Ga0466972_0000347 3300044658 Bacteria 25337
137 Ga0466972_0000930 3300044658 Bacteria 14090
138 Ga0466972_0052401 3300044658 Bacteria 1967
139 Ga0466964_0026306 3300044706 Unclassified 2277
140 Ga0495650_0000003 3300046471 Bacteria 900730
141 Ga0495650_0000025 3300046471 Bacteria 486001
142 Ga0495585_0000164 3300046492 Bacteria 71539
143 Ga0495585_0000456 3300046492 Bacteria 39053
144 Ga0495585_0000704 3300046492 Bacteria 30119
145 Ga0495607_0103170 3300046501 Unclassified 1524
146 Ga0495583_0006895 3300046506 Bacteria 7307
147 Ga0495606_0000002 3300046507 Bacteria 554637
148 Ga0495606_0000035 3300046507 Bacteria 243820
149 Ga0495610_0001042 3300046512 Bacteria 25468
150 Ga0495610_0006986 3300046512 Bacteria 7636
151 Ga0495610_0010692 3300046512 Bacteria 5681
152 Ga0495648_0000994 3300046524 Bacteria 29163
153 Ga0495648_0013964 3300046524 Bacteria 5909
154 Ga0495609_0005278 3300046538 Bacteria 6855
155 Ga0495633_0000273 3300046558 Bacteria 60402
156 Ga0495633_0007235 3300046558 Bacteria 6423
157 Ga0495633_0042999 3300046558 Bacteria 2144
158 Ga0495668_0000134 3300046616 Bacteria 112135
159 Ga0495668_0129472 3300046616 Bacteria 1382
160 Ga0495625_0000005 3300046660 Bacteria 596135
161 Ga0495625_0000063 3300046660 Bacteria 176435
162 Ga0495625_0004708 3300046660 Bacteria 12776
163 Ga0495625_0046914 3300046660 Bacteria 3116
164 Ga0495625_0048867 3300046660 Bacteria 3043
165 Ga0495625_0107416 3300046660 Bacteria 1910
166 Ga0495661_0003357 3300046665 Bacteria 11861
167 Ga0495661_0014150 3300046665 Bacteria 5345
168 Ga0495661_0038813 3300046665 Bacteria 2963
169 Ga0495661_0069271 3300046665 Bacteria 2067
170 Ga0495658_0004397 3300046683 Bacteria 6940
171 Ga0495649_0000003 3300046694 Bacteria 880817
172 Ga0495649_0000006 3300046694 Bacteria 542188
173 Ga0495649_0033462 3300046694 Bacteria 2829
174 Ga0495649_0100595 3300046694 Unclassified 1537
175 Ga0495687_000009 3300047443 Bacteria 419317
176 Ga0495687_000237 3300047443 Bacteria 76943
177 Ga0495687_000757 3300047443 Bacteria 34952
178 Ga0495687_072159 3300047443 Bacteria 1380
179 Ga0495686_0000040 3300047472 Bacteria 301210
180 Ga0495686_0000106 3300047472 Bacteria 175852
181 Ga0495686_0129987 3300047472 Bacteria 1494
182 Ga0496122_0001486 3300048925 Bacteria 37659
183 Ga0496124_0052074 3300048927 Unclassified 3480
184 Ga0496125_0064838 3300048928 Bacteria 2899
185 Ga0501225_0000216 3300049705 Bacteria 18080
186 Ga0501241_003126 3300049758 Bacteria 3152
187 nmdc:mga0k408_4417_c1 3300050493 Bacteria 7467
188 Ga0500644_0000227 3300053088 Bacteria 32271
189 Ga0500644_0055413 3300053088 Bacteria 1376
190 Ga0500646_0012577 3300053090 Bacteria 2185
191 Ga0500583_0015764 3300053092 Bacteria 3000
192 Ga0500562_000003 3300053108 Bacteria 293779
193 Ga0500562_000005 3300053108 Bacteria 266746
194 Ga0500562_000074 3300053108 Bacteria 46873
195 Ga0500562_000081 3300053108 Bacteria 43059
196 Ga0500608_001532 3300053122 Bacteria 8276
197 Ga0500614_006562 3300053123 Bacteria 2446
198 Ga0500618_001513 3300053125 Bacteria 10236
199 Ga0500652_004643 3300053131 Unclassified 4268
200 Ga0500568_0021995 3300053139 Bacteria 2736
201 Ga0500588_0001461 3300053146 Unclassified 4491
202 Ga0500588_0003750 3300053146 Bacteria 3236
203 Ga0500588_0004804 3300053146 Unclassified 2951
204 Ga0500622_0000129 3300053156 Bacteria 79535
205 Ga0500622_0000197 3300053156 Bacteria 63655
206 Ga0500622_0001802 3300053156 Bacteria 16324
207 Ga0500622_0006325 3300053156 Bacteria 6906
208 Ga0500624_000448 3300053157 Bacteria 12387
209 Ga0500634_0063125 3300053161 Bacteria 1960
210 Ga0500645_005017 3300053730 Unclassified 4957
211 Ga0500645_013075 3300053730 Bacteria 2672
212 Ga0500645_027058 3300053730 Bacteria 1741
213 2599477924 2599185184 Bacteria 6430550
214 2738754550 2738541283 Bacteria 7222293
215 2739301002 2738543023 Bacteria 6767879
216 2739302184 2738543023 Bacteria 6767879
217 2739305281 2738543023 Bacteria 6767879
218 2739616411 2739367656 Bacteria 5152243
219 2819587015 2818991444 Bacteria 6968812
220 2819590530 2818991444 Bacteria 6968812
221 2887381020 2887375801 Bacteria 5334027
222 2890740253 2890737413 Bacteria 4269751
223 2919438542 2919437846 Bacteria 6199444
224 2919438831 2919437846 Bacteria 6199444
225 2928079884 2928078545 Bacteria 6534839
226 2928147663 2928147474 Bacteria 6512076
227 2929182253 2929177148 Bacteria 7883697
228 2929242459 2929239360 Bacteria 7745570
229 2945978173 2945977869 Bacteria 7777518
230 2946015967 2946013367 Bacteria 7766675
231 Ga0307509_10067220
232 JGI24739J22299_10001206
233 JGI24737J22298_10004371
234 rootH1_10064271
235 rootH2_10175917
236 rootL2_10215602
237 rootL2_10251599
238 rootL2_10295282
239 rootH1_10050286
240 rootH1_10195271
241 rootH1_10243654
242 rootH1_10353340
243 Ga0055535_1003303
244 Ga0055542_1003008
245 Ga0065714_10003235
246 Ga0065714_10003296
247 Ga0068868_100031980
248 Ga0068868_100043599
249 Ga0070660_100029460
250 Ga0070659_100000225
251 Ga0070662_100000845
252 Ga0068853_100001745
253 Ga0068853_100110714
254 Ga0070665_100000001
255 Ga0070665_100000013
256 Ga0070665_100000016
257 Ga0068855_100069261
258 Ga0068855_100110095
259 Ga0068854_100105392
260 Ga0068856_100030829
261 Ga0068856_100120774
262 Ga0068852_100000342
263 Ga0068860_100000006
264 Ga0068860_100001023
265 Ga0075366_10010114
266 Ga0068871_100109704
267 Ga0105240_10000185
268 Ga0105240_10001552
269 Ga0105240_10126258
270 Ga0105240_10324122
271 Ga0105245_10316703
272 Ga0105241_10000539
273 Ga0105241_10002545
274 Ga0105241_10101795
275 Ga0105237_10000028
276 Ga0105237_10000154
277 Ga0105237_10003101
278 Ga0105237_10007724
279 Ga0105237_10010370
280 Ga0105237_10024689
281 Ga0105237_10136271
282 Ga0105237_10285420
283 Ga0105238_10005818
284 Ga0105238_10009649
285 Ga0105239_10000433
286 Ga0105239_10000856
287 Ga0105239_10002174
288 Ga0105239_10011119
289 Ga0105239_10346652
290 Ga0157371_10001565
291 Ga0157370_10002041
292 Ga0157370_10023478
293 Ga0157370_10044844
294 Ga0157370_10096535
295 Ga0157369_10018537
296 Ga0157369_10041375
297 Ga0157374_10000366
298 Ga0163162_10000468
299 Ga0163162_10015832
300 Ga0163162_10017435
301 Ga0163162_10487127
302 Ga0157372_10000954
303 Ga0157372_10021349
304 Ga0157372_10119601
305 Ga0163163_10020643
306 Ga0182008_10000024
307 Ga0157377_10014680
308 Ga0182006_1004667
309 Ga0163161_10000336
310 Ga0209258_100161
311 Ga0209148_1000161
312 Ga0209233_1012687
313 Ga0209455_1001478
314 Ga0207647_10000027
315 Ga0207647_10043146
316 Ga0207654_10036291
317 Ga0207695_10000117
318 Ga0207695_10000878
319 Ga0207695_10051499
320 Ga0207695_10130531
321 Ga0207671_10000185
322 Ga0207671_10002873
323 Ga0207671_10005087
324 Ga0207671_10007021
325 Ga0207671_10018729
326 Ga0207671_10044419
327 Ga0207694_10005149
328 Ga0207690_10159095
329 Ga0207706_10000010
330 Ga0207667_10003451
331 Ga0207667_10075793
332 Ga0207667_10229720
333 Ga0207640_10003410
334 Ga0207677_10019970
335 Ga0207677_10028921
336 Ga0207639_10241740
337 Ga0207639_10259149
338 Ga0207702_10030254
339 Ga0207702_10166261
340 Ga0207674_10012189
341 Ga0207674_10072436
342 Ga0207698_10003451
343 Ga0207698_10034059
344 Ga0207698_10054027
345 Ga0268266_10000024
346 Ga0268266_10000038
347 Ga0268264_10000064
348 Ga0268264_10004582
349 Ga0307515_10000226
350 Ga0307515_10000523
351 Ga0307515_10006449
352 Ga0307511_10000042
353 Ga0307511_10000151
354 Ga0307511_10003492
355 Ga0307513_10098496
356 Ga0307509_10171988
357 Ga0307509_10177384
358 Ga0307508_10001161
359 Ga0307508_10002709
360 Ga0307508_10072756
361 Ga0307516_10010103
362 Ga0307516_10166054
363 Ga0307507_10000023
364 Ga0439436_0019595
365 Ga0466972_0000347
366 Ga0466972_0000930
367 Ga0466972_0052401
368 Ga0466964_0026306
369 Ga0495650_0000003
370 Ga0495650_0000025
371 Ga0495585_0000164
372 Ga0495585_0000456
373 Ga0495585_0000704
374 Ga0495607_0103170
375 Ga0495583_0006895
376 Ga0495606_0000002
377 Ga0495606_0000035
378 Ga0495610_0001042
379 Ga0495610_0006986
380 Ga0495610_0010692
381 Ga0495648_0000994
382 Ga0495648_0013964
383 Ga0495609_0005278
384 Ga0495633_0000273
385 Ga0495633_0007235
386 Ga0495633_0042999
387 Ga0495668_0000134
388 Ga0495668_0129472
389 Ga0495625_0000005
390 Ga0495625_0000063
391 Ga0495625_0004708
392 Ga0495625_0046914
393 Ga0495625_0048867
394 Ga0495625_0107416
395 Ga0495661_0003357
396 Ga0495661_0014150
397 Ga0495661_0038813
398 Ga0495661_0069271
399 Ga0495658_0004397
400 Ga0495649_0000003
401 Ga0495649_0000006
402 Ga0495649_0033462
403 Ga0495649_0100595
404 Ga0495687_000009
405 Ga0495687_000237
406 Ga0495687_000757
407 Ga0495687_072159
408 Ga0495686_0000040
409 Ga0495686_0000106
410 Ga0495686_0129987
411 Ga0496122_0001486
412 Ga0496124_0052074
413 Ga0496125_0064838
414 Ga0501225_0000216
415 Ga0501241_003126
416 nmdc:mga0k408_4417_c1
417 Ga0500644_0000227
418 Ga0500644_0055413
419 Ga0500646_0012577
420 Ga0500583_0015764
421 Ga0500562_000003
422 Ga0500562_000005
423 Ga0500562_000074
424 Ga0500562_000081
425 Ga0500608_001532
426 Ga0500614_006562
427 Ga0500618_001513
428 Ga0500652_004643
429 Ga0500568_0021995
430 Ga0500588_0001461
431 Ga0500588_0003750
432 Ga0500588_0004804
433 Ga0500622_0000129
434 Ga0500622_0000197
435 Ga0500622_0001802
436 Ga0500622_0006325
437 Ga0500624_000448
438 Ga0500634_0063125
439 Ga0500645_005017
440 Ga0500645_013075
441 Ga0500645_027058
442 2599477924
443 2738754550
444 2739301002
445 2739302184
446 2739305281
447 2739616411
448 2819587015
449 2819590530
450 2887381020
451 2890740253
452 2919438542
453 2919438831
454 2928079884
455 2928147663
456 2929182253
457 2929242459
458 2945978173
459 2946015967

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16344

FecR_C

FecR, C-terminal

366

434

0.93

PF04773

FecR

FecR protein

199

303

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
4m0n-assembly1.cif.gz_A crystal structure of a putative anti-sigma factor (bdi_1681) from parabacteroides distasonis atcc 8503 at 1.65 a resolution 0.9108 191 397
4m0h-assembly2.cif.gz_B crystal structure of a putative anti-sigma factor (bdi_1681) from parabacteroides distasonis atcc 8503 at 2.50 a resolution 0.904 189 397
4m0n-assembly1.cif.gz_A crystal structure of a putative anti-sigma factor (bdi_1681) from parabacteroides distasonis atcc 8503 at 1.65 a resolution 0.8866 191 397
4m0h-assembly2.cif.gz_B crystal structure of a putative anti-sigma factor (bdi_1681) from parabacteroides distasonis atcc 8503 at 2.50 a resolution 0.8841 189 397
6ovm-assembly1.cif.gz_R crystal structure of the pseudomonas capeferrum anti-sigma regulator pupr c-terminal cell-surface signaling domain in complex with the outer membrane transporter pupb n-terminal signaling domain (semet) 0.8817 191 396
ID Description Score Start End Superfamily
4m0hB01 Mainly Beta;Sandwich;Jelly Rolls; 0.9634 189 313 2.60.120.1440
3bhpB00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9131 3 32 1.10.287.540
4m0hB01 Mainly Beta;Sandwich;Jelly Rolls; 0.8837 189 313 2.60.120.1440
4m0hB02 Alpha Beta;3-Layer(bab) Sandwich;Phage tail protein beta-alpha-beta fold; 0.8672 324 397 3.55.50.30
4g08A01 Alpha Beta;3-Layer(bab) Sandwich;Phage tail protein beta-alpha-beta fold; 0.8458 329 397 3.55.50.30
ID Description Score Start End GO Terms
AF-A0A3S9VUY9-F1-model_v4 FecR family protein 0.9536 211 397 GO:0016989
AF-A0A174S2D4-F1-model_v4 DUF4974 domain-containing protein (Fec operon regulator FecR) 0.9452 189 397 GO:0016020
GO:0016989
AF-A0A356IA00-F1-model_v4 FecR family protein 0.9439 188 396 GO:0016989
AF-A0A519UWG2-F1-model_v4 DUF4974 domain-containing protein 0.9402 181 397 GO:0016989
AF-A0A6N9LYT0-F1-model_v4 deleted 0.9256 193 395

Map