F343097

General Info

Members Datasets Scaffolds Average Seq Length
230 162 460 332

Family's Representative Sequence

Representative Sequence 3300025939|Ga0207665_10146796|Ga0207665_101467962
Length 381
Sequence MSAIAITAGELESLMTSALRQSGATPAMAAATARALVVAELEGIASHGASRIPQYCGHLRNGRANGAAVPVVSHDRKAACVVDAKQGLAFEACALAAHEAVQRAREFGVAFVSVANSNHFGVAAFHLEPVVAAGLVGIAMGNSPAAMPAWGGKRALFGTNPIAAGFPRRAGMPLMIDLSLSAVARGKIMVAAREAKPIPEGWALDKEGKPTTDAKAALEGSMLPAGGVKGAMLALTVELLVCALSGSAYGFESDSFFTDEGRPTRIGQAILAIDPGALAGRSVYDERVETLIQAMLADDEVRLPGERRRKNRERAEREGMAVPPELMAKIRALAVTSGMRAAVLPDVSAVARSSRTRSPSCRCAKNSNAMLSGSRKLRPDP

Samples

Sample ID Description Type Environment
1 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
4 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
5 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
36 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
37 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
66 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
67 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
68 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
100 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
101 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
102 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
103 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
104 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
105 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
106 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
107 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
108 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
109 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
110 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
111 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
112 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
113 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
114 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
115 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
116 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
117 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
118 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
119 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
120 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
121 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
122 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
123 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
124 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
125 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
126 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
127 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
128 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
129 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
130 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
131 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
132 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
133 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
134 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
135 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
136 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
139 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
140 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
141 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
142 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
143 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
144 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
145 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
146 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
147 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
149 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
150 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
151 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
152 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
153 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
154 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
155 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
156 2643221569 Achromobacter sp. Root565 Isolate Unclassified
157 2643221594 Achromobacter sp. Root170 Isolate Unclassified
158 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
159 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
160 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
161 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
162 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.65
Metatranscriptomes 0
Isolates 4.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.57
Nodule 1.3
Rhizoplane 1.74
Rhizosphere 83.48
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207665_10146796 3300025939 Bacteria 1686
2 JGI25151J46595_10001147 3300003187 Bacteria 19200
3 Ga0055529_1000955 3300003763 Bacteria 15071
4 Ga0055524_1000220 3300003775 Bacteria 60522
5 Ga0055524_1018372 3300003775 Bacteria 2430
6 Ga0055534_1004574 3300003784 Bacteria 3956
7 Ga0070658_10062853 3300005327 Bacteria 3026
8 Ga0070658_10066487 3300005327 Bacteria 2945
9 Ga0070658_10097842 3300005327 Bacteria 2423
10 Ga0070658_10315691 3300005327 Bacteria 1334
11 Ga0070690_100089725 3300005330 Bacteria 2022
12 Ga0068869_100039190 3300005334 Bacteria 3382
13 Ga0068869_100218350 3300005334 Bacteria 1510
14 Ga0068868_100096762 3300005338 Bacteria 2385
15 Ga0070689_100009947 3300005340 Bacteria 6766
16 Ga0070689_100056778 3300005340 Bacteria 3037
17 Ga0070661_100236504 3300005344 Bacteria 1405
18 Ga0070675_100034052 3300005354 Bacteria 4132
19 Ga0070675_100050908 3300005354 Bacteria 3402
20 Ga0070674_100091605 3300005356 Bacteria 2196
21 Ga0070674_100135773 3300005356 Bacteria 1839
22 Ga0070688_100016584 3300005365 Bacteria 4215
23 Ga0070714_100072440 3300005435 Bacteria 2982
24 Ga0070714_100148498 3300005435 Bacteria 2110
25 Ga0070713_100086433 3300005436 Bacteria 2689
26 Ga0070713_100175053 3300005436 Bacteria 1925
27 Ga0070701_10013616 3300005438 Bacteria 3705
28 Ga0070681_10035186 3300005458 Bacteria 5030
29 Ga0068867_100224881 3300005459 Bacteria 1514
30 Ga0070685_10045919 3300005466 Bacteria 2507
31 Ga0070698_100255264 3300005471 Bacteria 1686
32 Ga0070679_100149283 3300005530 Bacteria 2315
33 Ga0070679_100207258 3300005530 Bacteria 1925
34 Ga0070684_100111285 3300005535 Bacteria 2456
35 Ga0070684_100131511 3300005535 Bacteria 2258
36 Ga0070684_100132598 3300005535 Bacteria 2248
37 Ga0068853_100080153 3300005539 Bacteria 2856
38 Ga0070696_100019472 3300005546 Bacteria 4596
39 Ga0070693_100002462 3300005547 Bacteria 8531
40 Ga0070704_100072409 3300005549 Bacteria 2507
41 Ga0068855_100009248 3300005563 Bacteria 11906
42 Ga0068855_100033372 3300005563 Bacteria 6143
43 Ga0068855_100044539 3300005563 Bacteria 5250
44 Ga0068855_100077363 3300005563 Bacteria 3861
45 Ga0068855_100350608 3300005563 Bacteria 1626
46 Ga0068854_100384932 3300005578 Bacteria 1157
47 Ga0068856_100025317 3300005614 Bacteria 5785
48 Ga0068856_100072176 3300005614 Bacteria 3418
49 Ga0068852_100001693 3300005616 Bacteria 15031
50 Ga0068852_100002576 3300005616 Bacteria 12505
51 Ga0068852_100110939 3300005616 Bacteria 2493
52 Ga0068859_100336791 3300005617 Bacteria 1603
53 Ga0068851_10008052 3300005834 Bacteria 4863
54 Ga0068858_100006737 3300005842 Bacteria 11178
55 Ga0068858_100064833 3300005842 Bacteria 3381
56 Ga0068858_100135042 3300005842 Bacteria 2314
57 Ga0070715_10027046 3300006163 Bacteria 2288
58 Ga0075367_10135524 3300006178 Bacteria 1523
59 Ga0075369_10010220 3300006186 Bacteria 3668
60 Ga0075366_10001868 3300006195 Bacteria 10618
61 Ga0075366_10012031 3300006195 Bacteria 4901
62 Ga0097621_100001320 3300006237 Bacteria 17068
63 Ga0097621_100016092 3300006237 Bacteria 5646
64 Ga0068871_100007189 3300006358 Bacteria 7942
65 Ga0075428_100117384 3300006844 Bacteria 2899
66 Ga0075434_100181475 3300006871 Bacteria 2125
67 Ga0068865_100005566 3300006881 Bacteria 7640
68 Ga0075436_100002662 3300006914 Bacteria 12275
69 Ga0097620_100336788 3300006931 Bacteria 1603
70 Ga0075435_100057258 3300007076 Bacteria 3153
71 Ga0105240_10011927 3300009093 Bacteria 12051
72 Ga0105240_10201679 3300009093 Bacteria 2331
73 Ga0105240_10236803 3300009093 Bacteria 2118
74 Ga0111539_10002585 3300009094 Bacteria 23976
75 Ga0105245_10029626 3300009098 Bacteria 4838
76 Ga0105243_10079661 3300009148 Bacteria 2670
77 Ga0105241_10022834 3300009174 Bacteria 4637
78 Ga0105242_10009085 3300009176 Bacteria 7634
79 Ga0105242_10150060 3300009176 Bacteria 2031
80 Ga0105238_10003621 3300009551 Bacteria 15401
81 Ga0105238_10115357 3300009551 Bacteria 2665
82 Ga0157370_10002793 3300013104 Bacteria 20861
83 Ga0157369_10003646 3300013105 Bacteria 18271
84 Ga0157369_10169137 3300013105 Bacteria 2304
85 Ga0157369_10288463 3300013105 Bacteria 1709
86 Ga0157374_10086396 3300013296 Bacteria 2984
87 Ga0157378_10124578 3300013297 Bacteria 2379
88 Ga0157372_10012965 3300013307 Bacteria 8890
89 Ga0157372_10058913 3300013307 Bacteria 4294
90 Ga0157372_10315387 3300013307 Bacteria 1820
91 Ga0157375_10053325 3300013308 Bacteria 3978
92 Ga0157377_10224195 3300014745 Bacteria 1205
93 Ga0157379_10145052 3300014968 Bacteria 2141
94 Ga0209565_1000077 3300025263 Bacteria 161163
95 Ga0209455_1001612 3300025272 Bacteria 9889
96 Ga0209675_1003004 3300025291 Bacteria 8298
97 Ga0209675_1013321 3300025291 Bacteria 2580
98 Ga0209025_1000231 3300025294 Bacteria 130671
99 Ga0209025_1000762 3300025294 Bacteria 53705
100 Ga0209025_1004233 3300025294 Bacteria 12630
101 Ga0209564_1000274 3300025295 Bacteria 107980
102 Ga0209758_1008050 3300025297 Bacteria 6956
103 Ga0209256_1000119 3300025299 Bacteria 168215
104 Ga0209256_1001038 3300025299 Bacteria 32584
105 Ga0209051_1006769 3300025303 Bacteria 6389
106 Ga0209051_1019032 3300025303 Bacteria 3013
107 Ga0207705_10023905 3300025909 Bacteria 4361
108 Ga0207705_10047435 3300025909 Bacteria 3089
109 Ga0207707_10121141 3300025912 Bacteria 2287
110 Ga0207695_10034809 3300025913 Bacteria 5471
111 Ga0207695_10053015 3300025913 Bacteria 4245
112 Ga0207695_10075303 3300025913 Bacteria 3434
113 Ga0207695_10189009 3300025913 Bacteria 1977
114 Ga0207663_10054631 3300025916 Bacteria 2502
115 Ga0207657_10119884 3300025919 Bacteria 2165
116 Ga0207681_10107935 3300025923 Bacteria 2020
117 Ga0207694_10015673 3300025924 Bacteria 5717
118 Ga0207659_10075800 3300025926 Bacteria 2469
119 Ga0207659_10075814 3300025926 Bacteria 2469
120 Ga0207659_10086300 3300025926 Bacteria 2333
121 Ga0207687_10038318 3300025927 Bacteria 3276
122 Ga0207700_10083083 3300025928 Bacteria 2506
123 Ga0207686_10026883 3300025934 Bacteria 3363
124 Ga0207686_10033695 3300025934 Bacteria 3059
125 Ga0207669_10028988 3300025937 Bacteria 3054
126 Ga0207704_10043821 3300025938 Bacteria 2646
127 Ga0207704_10091994 3300025938 Bacteria 1995
128 Ga0207691_10035150 3300025940 Bacteria 4655
129 Ga0207711_10057676 3300025941 Bacteria 3338
130 Ga0207711_10161127 3300025941 Bacteria 2030
131 Ga0207711_10291404 3300025941 Bacteria 1504
132 Ga0207689_10088712 3300025942 Bacteria 2540
133 Ga0207689_10190470 3300025942 Bacteria 1692
134 Ga0207667_10007781 3300025949 Bacteria 12814
135 Ga0207667_10012827 3300025949 Bacteria 9629
136 Ga0207667_10038792 3300025949 Bacteria 5081
137 Ga0207667_10072271 3300025949 Bacteria 3586
138 Ga0207667_10305210 3300025949 Bacteria 1626
139 Ga0207640_10251078 3300025981 Bacteria 1373
140 Ga0207677_10015095 3300026023 Bacteria 4531
141 Ga0207703_10038411 3300026035 Bacteria 3820
142 Ga0207703_10093189 3300026035 Bacteria 2536
143 Ga0207703_10110383 3300026035 Bacteria 2346
144 Ga0207639_10099014 3300026041 Bacteria 2351
145 Ga0207702_10021877 3300026078 Bacteria 5296
146 Ga0207702_10161245 3300026078 Bacteria 2048
147 Ga0207641_10065358 3300026088 Bacteria 3112
148 Ga0207648_10020484 3300026089 Bacteria 5955
149 Ga0207648_10124758 3300026089 Bacteria 2265
150 Ga0207676_10161250 3300026095 Bacteria 1943
151 Ga0207675_100141600 3300026118 Bacteria 2285
152 Ga0207675_100286234 3300026118 Bacteria 1602
153 Ga0207683_10055465 3300026121 Bacteria 3475
154 Ga0207698_10051454 3300026142 Bacteria 3149
155 Ga0207698_10061727 3300026142 Bacteria 2923
156 Ga0207698_10400090 3300026142 Bacteria 1312
157 Ga0268266_10059396 3300028379 Bacteria 3295
158 Ga0307408_100094219 3300031548 Bacteria 2267
159 Ga0307408_100173339 3300031548 Bacteria 1724
160 Ga0307405_10068677 3300031731 Bacteria 2269
161 Ga0307413_10181947 3300031824 Bacteria 1500
162 Ga0307406_10171645 3300031901 Bacteria 1570
163 Ga0307416_100038408 3300032002 Bacteria 3694
164 Ga0307416_100051894 3300032002 Bacteria 3280
165 Ga0307416_100117660 3300032002 Bacteria 2360
166 Ga0307416_100272394 3300032002 Bacteria 1663
167 Ga0373934_0000061 3300035086 Bacteria 37034
168 Ga0373956_0000003 3300035119 Bacteria 81669
169 Ga0373957_0008107 3300035120 Bacteria 3392
170 Ga0373924_0008423 3300035410 Bacteria 3747
171 Ga0373931_0174425 3300035691 Bacteria 1269
172 Ga0373927_0023411 3300035695 Bacteria 4045
173 Ga0373933_0001377 3300035724 Bacteria 14295
174 Ga0373937_0000196 3300036401 Bacteria 59256
175 Ga0373937_0035556 3300036401 Bacteria 4535
176 Ga0373937_0382975 3300036401 Bacteria 1334
177 Ga0373925_0093266 3300037068 Bacteria 2304
178 Ga0395905_0010497 3300037471 Bacteria 9008
179 Ga0451577_0034873 3300042876 Bacteria 4534
180 Ga0466957_0021132 3300044842 Bacteria 3833
181 Ga0451576_0113885 3300045051 Bacteria 2815
182 Ga0495651_0002396 3300046462 Bacteria 14471
183 Ga0495605_0054355 3300046474 Bacteria 1939
184 Ga0495596_0005830 3300046500 Bacteria 5765
185 Ga0495631_0036940 3300046518 Bacteria 2178
186 Ga0495643_0015014 3300046522 Bacteria 4591
187 Ga0495609_0029976 3300046538 Bacteria 2475
188 Ga0495621_0011028 3300046539 Bacteria 2783
189 Ga0495621_0015553 3300046539 Bacteria 2428
190 Ga0495645_0001336 3300046543 Bacteria 16693
191 Ga0495667_0070295 3300046559 Bacteria 2284
192 Ga0495623_0005106 3300046679 Bacteria 8613
193 Ga0495670_0092583 3300046691 Bacteria 1548
194 Ga0495600_0022703 3300046809 Bacteria 4032
195 Ga0495677_0035449 3300047445 Bacteria 1820
196 Ga0495681_0000005 3300047470 Bacteria 225279
197 Ga0496104_0147056 3300048907 Bacteria 2263
198 Ga0496110_0306192 3300048913 Bacteria 1447
199 Ga0496115_0270403 3300048918 Bacteria 1396
200 Ga0496116_0029602 3300048919 Bacteria 3945
201 Ga0496124_0000103 3300048927 Bacteria 179162
202 Ga0496124_0051792 3300048927 Bacteria 3491
203 Ga0501034_0006239 3300049571 Bacteria 12830
204 Ga0501047_0003646 3300049581 Bacteria 14511
205 Ga0501047_0239794 3300049581 Bacteria 1664
206 Ga0501067_0046312 3300049583 Bacteria 2414
207 Ga0501068_0110339 3300049584 Bacteria 1710
208 Ga0501069_0001042 3300049585 Bacteria 13254
209 Ga0501070_0000609 3300049586 Bacteria 32789
210 Ga0501072_0038527 3300049588 Bacteria 3752
211 Ga0501073_0002393 3300049589 Bacteria 14036
212 Ga0501074_0000574 3300049590 Bacteria 22747
213 Ga0501080_0012487 3300049742 Bacteria 7789
214 Ga0501083_0034964 3300049744 Bacteria 3434
215 Ga0501035_0086995 3300049822 Bacteria 2754
216 Ga0501044_0067619 3300049823 Bacteria 3640
217 nmdc:mga08y16_147_c1 3300050511 Bacteria 61021
218 nmdc:mga08x19_957_c1 3300050514 Bacteria 18098
219 nmdc:mga0a205_115563_c1 3300050515 Bacteria 2582
220 Ga0495619_0035999 3300053085 Bacteria 3222
221 2513952494 2513237150 Bacteria 6553639
222 2514041628 2513237165 Bacteria 6771773
223 2599904769 2599185292 Bacteria 6290804
224 2643861312 2643221569 Bacteria 6064337
225 2643983095 2643221594 Bacteria 5811388
226 2809032864 2808606395 Bacteria 6020352
227 2834644251 2834641062 Bacteria 5559922
228 2857543451 2857542790 Bacteria 5326616
229 2919708431 2919704043 Bacteria 5560311
230 644750891 644736347 Bacteria 6476522
231 Ga0207665_10146796
232 JGI25151J46595_10001147
233 Ga0055529_1000955
234 Ga0055524_1000220
235 Ga0055524_1018372
236 Ga0055534_1004574
237 Ga0070658_10062853
238 Ga0070658_10066487
239 Ga0070658_10097842
240 Ga0070658_10315691
241 Ga0070690_100089725
242 Ga0068869_100039190
243 Ga0068869_100218350
244 Ga0068868_100096762
245 Ga0070689_100009947
246 Ga0070689_100056778
247 Ga0070661_100236504
248 Ga0070675_100034052
249 Ga0070675_100050908
250 Ga0070674_100091605
251 Ga0070674_100135773
252 Ga0070688_100016584
253 Ga0070714_100072440
254 Ga0070714_100148498
255 Ga0070713_100086433
256 Ga0070713_100175053
257 Ga0070701_10013616
258 Ga0070681_10035186
259 Ga0068867_100224881
260 Ga0070685_10045919
261 Ga0070698_100255264
262 Ga0070679_100149283
263 Ga0070679_100207258
264 Ga0070684_100111285
265 Ga0070684_100131511
266 Ga0070684_100132598
267 Ga0068853_100080153
268 Ga0070696_100019472
269 Ga0070693_100002462
270 Ga0070704_100072409
271 Ga0068855_100009248
272 Ga0068855_100033372
273 Ga0068855_100044539
274 Ga0068855_100077363
275 Ga0068855_100350608
276 Ga0068854_100384932
277 Ga0068856_100025317
278 Ga0068856_100072176
279 Ga0068852_100001693
280 Ga0068852_100002576
281 Ga0068852_100110939
282 Ga0068859_100336791
283 Ga0068851_10008052
284 Ga0068858_100006737
285 Ga0068858_100064833
286 Ga0068858_100135042
287 Ga0070715_10027046
288 Ga0075367_10135524
289 Ga0075369_10010220
290 Ga0075366_10001868
291 Ga0075366_10012031
292 Ga0097621_100001320
293 Ga0097621_100016092
294 Ga0068871_100007189
295 Ga0075428_100117384
296 Ga0075434_100181475
297 Ga0068865_100005566
298 Ga0075436_100002662
299 Ga0097620_100336788
300 Ga0075435_100057258
301 Ga0105240_10011927
302 Ga0105240_10201679
303 Ga0105240_10236803
304 Ga0111539_10002585
305 Ga0105245_10029626
306 Ga0105243_10079661
307 Ga0105241_10022834
308 Ga0105242_10009085
309 Ga0105242_10150060
310 Ga0105238_10003621
311 Ga0105238_10115357
312 Ga0157370_10002793
313 Ga0157369_10003646
314 Ga0157369_10169137
315 Ga0157369_10288463
316 Ga0157374_10086396
317 Ga0157378_10124578
318 Ga0157372_10012965
319 Ga0157372_10058913
320 Ga0157372_10315387
321 Ga0157375_10053325
322 Ga0157377_10224195
323 Ga0157379_10145052
324 Ga0209565_1000077
325 Ga0209455_1001612
326 Ga0209675_1003004
327 Ga0209675_1013321
328 Ga0209025_1000231
329 Ga0209025_1000762
330 Ga0209025_1004233
331 Ga0209564_1000274
332 Ga0209758_1008050
333 Ga0209256_1000119
334 Ga0209256_1001038
335 Ga0209051_1006769
336 Ga0209051_1019032
337 Ga0207705_10023905
338 Ga0207705_10047435
339 Ga0207707_10121141
340 Ga0207695_10034809
341 Ga0207695_10053015
342 Ga0207695_10075303
343 Ga0207695_10189009
344 Ga0207663_10054631
345 Ga0207657_10119884
346 Ga0207681_10107935
347 Ga0207694_10015673
348 Ga0207659_10075800
349 Ga0207659_10075814
350 Ga0207659_10086300
351 Ga0207687_10038318
352 Ga0207700_10083083
353 Ga0207686_10026883
354 Ga0207686_10033695
355 Ga0207669_10028988
356 Ga0207704_10043821
357 Ga0207704_10091994
358 Ga0207691_10035150
359 Ga0207711_10057676
360 Ga0207711_10161127
361 Ga0207711_10291404
362 Ga0207689_10088712
363 Ga0207689_10190470
364 Ga0207667_10007781
365 Ga0207667_10012827
366 Ga0207667_10038792
367 Ga0207667_10072271
368 Ga0207667_10305210
369 Ga0207640_10251078
370 Ga0207677_10015095
371 Ga0207703_10038411
372 Ga0207703_10093189
373 Ga0207703_10110383
374 Ga0207639_10099014
375 Ga0207702_10021877
376 Ga0207702_10161245
377 Ga0207641_10065358
378 Ga0207648_10020484
379 Ga0207648_10124758
380 Ga0207676_10161250
381 Ga0207675_100141600
382 Ga0207675_100286234
383 Ga0207683_10055465
384 Ga0207698_10051454
385 Ga0207698_10061727
386 Ga0207698_10400090
387 Ga0268266_10059396
388 Ga0307408_100094219
389 Ga0307408_100173339
390 Ga0307405_10068677
391 Ga0307413_10181947
392 Ga0307406_10171645
393 Ga0307416_100038408
394 Ga0307416_100051894
395 Ga0307416_100117660
396 Ga0307416_100272394
397 Ga0373934_0000061
398 Ga0373956_0000003
399 Ga0373957_0008107
400 Ga0373924_0008423
401 Ga0373931_0174425
402 Ga0373927_0023411
403 Ga0373933_0001377
404 Ga0373937_0000196
405 Ga0373937_0035556
406 Ga0373937_0382975
407 Ga0373925_0093266
408 Ga0395905_0010497
409 Ga0451577_0034873
410 Ga0466957_0021132
411 Ga0451576_0113885
412 Ga0495651_0002396
413 Ga0495605_0054355
414 Ga0495596_0005830
415 Ga0495631_0036940
416 Ga0495643_0015014
417 Ga0495609_0029976
418 Ga0495621_0011028
419 Ga0495621_0015553
420 Ga0495645_0001336
421 Ga0495667_0070295
422 Ga0495623_0005106
423 Ga0495670_0092583
424 Ga0495600_0022703
425 Ga0495677_0035449
426 Ga0495681_0000005
427 Ga0496104_0147056
428 Ga0496110_0306192
429 Ga0496115_0270403
430 Ga0496116_0029602
431 Ga0496124_0000103
432 Ga0496124_0051792
433 Ga0501034_0006239
434 Ga0501047_0003646
435 Ga0501047_0239794
436 Ga0501067_0046312
437 Ga0501068_0110339
438 Ga0501069_0001042
439 Ga0501070_0000609
440 Ga0501072_0038527
441 Ga0501073_0002393
442 Ga0501074_0000574
443 Ga0501080_0012487
444 Ga0501083_0034964
445 Ga0501035_0086995
446 Ga0501044_0067619
447 nmdc:mga08y16_147_c1
448 nmdc:mga08x19_957_c1
449 nmdc:mga0a205_115563_c1
450 Ga0495619_0035999
451 2513952494
452 2514041628
453 2599904769
454 2643861312
455 2643983095
456 2809032864
457 2834644251
458 2857543451
459 2919708431
460 644750891

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02615

Ldh_2

Malate/L-lactate dehydrogenase

6

331

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
4h8a-assembly1.cif.gz_A crystal structure of ureidoglycolate dehydrogenase in binary complex with nadh 0.8951 4 310
1xrh-assembly3.cif.gz_E crystal structure of ureidoglycolate dehydrogenase from escherichia coli 0.8947 4 310
4fju-assembly1.cif.gz_B crystal structure of ureidoglycolate dehydrogenase in ternary complex with nadh and glyoxylate 0.8904 4 293
1wtj-assembly1.cif.gz_A crystal structure of delta1-piperideine-2-carboxylate reductase from pseudomonas syringae pvar.tomato 0.8841 4 313
2x06-assembly3.cif.gz_D sulfolactate dehydrogenase from methanocaldococcus jannaschii 0.884 4 316
ID Description Score Start End Superfamily
3uoeA03 Alpha Beta;2-Layer Sandwich;Wheat Germ Agglutinin (Isolectin 2); domain 1;Hypothetical oxidoreductase yiak; domain 3 0.9691 166 200 3.30.60.50
1wtjA03 Alpha Beta;2-Layer Sandwich;Wheat Germ Agglutinin (Isolectin 2); domain 1;Hypothetical oxidoreductase yiak; domain 3 0.916 165 200 3.30.60.50
1z2iA03 Alpha Beta;2-Layer Sandwich;Wheat Germ Agglutinin (Isolectin 2); domain 1;Hypothetical oxidoreductase yiak; domain 3 0.9151 167 197 3.30.60.50
3uoeB02 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1;Malate/L-lactate/L-sulpholactate dehydrogenase, NADPH binding domain 0.9033 50 256 3.30.1370.60
1wtjA02 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1;Malate/L-lactate/L-sulpholactate dehydrogenase, NADPH binding domain 0.8888 44 283 3.30.1370.60
ID Description Score Start End GO Terms
AF-A0A259P281-F1-model_v4 deleted 0.9602 4 140
AF-A0A7V7AHX2-F1-model_v4 Ldh family oxidoreductase 0.9591 5 142 GO:0016491
AF-A0A661BEZ4-F1-model_v4 Ldh family oxidoreductase 0.9565 4 144 GO:0016491
AF-A0A4Q5QJ34-F1-model_v4 Ldh family oxidoreductase 0.9542 4 157 GO:0016491
AF-A0A7I0J855-F1-model_v4 Ldh family oxidoreductase 0.9537 4 157 GO:0016491

Map