F342801

General Info

Members Datasets Scaffolds Average Seq Length
230 118 460 283

Family's Representative Sequence

Representative Sequence 3300005458|Ga0070681_10281739|Ga0070681_102817392
Length 320
Sequence MASKLHAVNYGRVRNPGTKSTARAAARSKEDIVPNLKQILFPVDFSEQNCSVAPYVACMASRYGAHVTMLHVAEISTAGYPEWPAQASLVDFEAMAAERQQRLDAFLASDFQSVAASRLMLKGDPARVISEYADRQNIDLIMMPTHGYGPFRRFLLGSITAKVLHDVKCPVWTSAHLPERAAPPAGYRSLLCAVDLMPTSVSLIQWAAAFAREHQATLKLVHAIPAAEKTGGIDIEGNRFRAILVDVAREELAKMQQQAKTNLEVLVEAGDVAPVVHRAAELHHADLVVIGRGVMQGLFGRMRTHVYSVIREAPCPVISV

Samples

Sample ID Description Type Environment
1 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
25 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
30 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
44 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
61 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
62 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
63 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
64 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
65 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
66 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
67 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
68 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
69 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
70 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
71 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
72 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
73 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
74 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
75 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
76 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
79 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
80 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
81 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
82 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
83 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
84 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
85 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
86 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
87 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
88 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
89 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
90 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
91 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
92 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
93 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
94 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
95 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
96 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
97 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
98 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
99 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
100 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
101 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
102 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
103 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
104 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
105 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
106 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
107 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
108 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
109 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
110 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
111 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
112 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
113 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
114 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
115 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
116 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
117 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
118 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.43
Rhizosphere 98.7
Stem 0
Stem Tuber 0
Unclassified 29.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070681_10281739 3300005458 Bacteria 1573
2 Ga0065707_10281927 3300005295 Unclassified 1045
3 Ga0070683_100245142 3300005329 Bacteria 1704
4 Ga0068869_100041254 3300005334 Bacteria 3304
5 Ga0070680_100138076 3300005336 Bacteria 2043
6 Ga0070680_100421369 3300005336 Unclassified 1139
7 Ga0070688_100161421 3300005365 Bacteria 1540
8 Ga0070714_100000693 3300005435 Bacteria 23817
9 Ga0070714_100000766 3300005435 Bacteria 22734
10 Ga0070713_100002273 3300005436 Bacteria 12481
11 Ga0070713_100012639 3300005436 Bacteria 6203
12 Ga0070713_100440105 3300005436 Unclassified 1223
13 Ga0070711_100039315 3300005439 Unclassified 3185
14 Ga0070711_100198300 3300005439 Unclassified 1547
15 Ga0070681_10003463 3300005458 Bacteria 14783
16 Ga0070681_10035660 3300005458 Bacteria 4996
17 Ga0070681_10039698 3300005458 Bacteria 4717
18 Ga0070706_100582569 3300005467 Unclassified 1040
19 Ga0070698_100395244 3300005471 Unclassified 1315
20 Ga0070684_100029805 3300005535 Bacteria 4629
21 Ga0070684_100095725 3300005535 Unclassified 2646
22 Ga0070684_100133997 3300005535 Bacteria 2236
23 Ga0070684_100316865 3300005535 Bacteria 1432
24 Ga0068853_100356319 3300005539 Bacteria 1362
25 Ga0068853_100378730 3300005539 Unclassified 1321
26 Ga0070695_100042267 3300005545 Bacteria 2893
27 Ga0070695_100046148 3300005545 Unclassified 2780
28 Ga0070696_100018575 3300005546 Bacteria 4702
29 Ga0070693_100144600 3300005547 Bacteria 1500
30 Ga0068857_100009085 3300005577 Bacteria 8622
31 Ga0068859_100038604 3300005617 Bacteria 4790
32 Ga0068859_100208317 3300005617 Archaea 2041
33 Ga0068863_100195784 3300005841 Unclassified 1943
34 Ga0070717_10018793 3300006028 Bacteria 5405
35 Ga0070717_10095864 3300006028 Bacteria 2512
36 Ga0070717_10133453 3300006028 Bacteria 2137
37 Ga0097621_100010652 3300006237 Bacteria 6739
38 Ga0068871_100008286 3300006358 Bacteria 7470
39 Ga0068871_100422216 3300006358 Bacteria 1191
40 Ga0075431_100235537 3300006847 Unclassified 1864
41 Ga0068865_100051138 3300006881 Bacteria 2858
42 Ga0075436_100100505 3300006914 Unclassified 2014
43 Ga0075436_100422608 3300006914 Unclassified 968
44 Ga0097620_100038604 3300006931 Bacteria 4790
45 Ga0097620_100208315 3300006931 Archaea 2041
46 Ga0105240_10093501 3300009093 Bacteria 3669
47 Ga0105245_10000312 3300009098 Bacteria 46482
48 Ga0105245_10222711 3300009098 Unclassified 1821
49 Ga0105245_10274084 3300009098 Bacteria 1647
50 Ga0105241_10105109 3300009174 Bacteria 2251
51 Ga0105241_10106026 3300009174 Unclassified 2242
52 Ga0105242_10028275 3300009176 Bacteria 4462
53 Ga0105242_10405934 3300009176 Unclassified 1273
54 Ga0105248_10065693 3300009177 Bacteria 4073
55 Ga0105248_10077809 3300009177 Bacteria 3729
56 Ga0105248_10099641 3300009177 Bacteria 3274
57 Ga0105237_10015577 3300009545 Bacteria 7907
58 Ga0105238_10057126 3300009551 Bacteria 3913
59 Ga0105239_10018266 3300010375 Bacteria 7753
60 Ga0105246_10134840 3300011119 Bacteria 1849
61 Ga0157369_10026047 3300013105 Bacteria 6489
62 Ga0157369_10260352 3300013105 Bacteria 1809
63 Ga0157378_10001857 3300013297 Bacteria 18963
64 Ga0157378_10330020 3300013297 Bacteria 1484
65 Ga0163162_10577653 3300013306 Bacteria 1251
66 Ga0163162_10705259 3300013306 Unclassified 1131
67 Ga0157372_10005946 3300013307 Bacteria 12972
68 Ga0157372_10016201 3300013307 Bacteria 7997
69 Ga0157375_10165235 3300013308 Unclassified 2358
70 Ga0163163_10233992 3300014325 Unclassified 1887
71 Ga0157379_10047769 3300014968 Bacteria 3819
72 Ga0213875_10196175 3300021388 Unclassified 950
73 Ga0207707_10004998 3300025912 Bacteria 11649
74 Ga0207707_10010240 3300025912 Bacteria 8139
75 Ga0207695_10345810 3300025913 Unclassified 1375
76 Ga0207671_10017826 3300025914 Bacteria 5463
77 Ga0207663_10011665 3300025916 Unclassified 4728
78 Ga0207694_10091604 3300025924 Bacteria 2399
79 Ga0207687_10005862 3300025927 Bacteria 8123
80 Ga0207687_10231002 3300025927 Unclassified 1461
81 Ga0207700_10000545 3300025928 Bacteria 22038
82 Ga0207700_10034291 3300025928 Unclassified 3643
83 Ga0207700_10220459 3300025928 Bacteria 1608
84 Ga0207664_10001688 3300025929 Bacteria 14535
85 Ga0207664_10015790 3300025929 Bacteria 5493
86 Ga0207709_10108321 3300025935 Unclassified 1852
87 Ga0207670_10463055 3300025936 Unclassified 1024
88 Ga0207704_10007686 3300025938 Bacteria 5108
89 Ga0207689_10077386 3300025942 Bacteria 2734
90 Ga0207689_10081641 3300025942 Bacteria 2657
91 Ga0207661_10012446 3300025944 Bacteria 6182
92 Ga0207702_10123295 3300026078 Bacteria 2322
93 Ga0207641_10058907 3300026088 Unclassified 3270
94 Ga0207674_10000852 3300026116 Bacteria 39796
95 Ga0265325_10016117 3300031241 Bacteria 4182
96 Ga0265325_10140841 3300031241 Bacteria 1147
97 Ga0265314_10009943 3300031711 Bacteria 7977
98 Ga0307413_10288037 3300031824 Bacteria 1239
99 Ga0373926_0084546 3300035083 Unclassified 1176
100 Ga0373934_0032531 3300035086 Bacteria 2046
101 Ga0373934_0042616 3300035086 Bacteria 1793
102 Ga0373934_0060065 3300035086 Bacteria 1514
103 Ga0373934_0067624 3300035086 Bacteria 1427
104 Ga0373934_0181804 3300035086 Unclassified 864
105 Ga0373953_0038462 3300035117 Unclassified 1892
106 Ga0373954_0033396 3300035118 Unclassified 2381
107 Ga0373954_0093083 3300035118 Bacteria 1449
108 Ga0373956_0043771 3300035119 Bacteria 1994
109 Ga0373957_0163577 3300035120 Unclassified 917
110 Ga0373943_0003420 3300035170 Bacteria 7232
111 Ga0373946_0038437 3300035171 Unclassified 1949
112 Ga0373955_0087592 3300035172 Unclassified 1770
113 Ga0373924_0100187 3300035410 Bacteria 1246
114 Ga0373935_0112696 3300035692 Unclassified 1807
115 Ga0373935_0325487 3300035692 Bacteria 1091
116 Ga0373927_0001220 3300035695 Bacteria 19512
117 Ga0373927_0002216 3300035695 Bacteria 14292
118 Ga0373927_0014629 3300035695 Bacteria 5189
119 Ga0373927_0016491 3300035695 Bacteria 4871
120 Ga0373927_0016689 3300035695 Bacteria 4844
121 Ga0373927_0045753 3300035695 Bacteria 2831
122 Ga0373927_0082070 3300035695 Bacteria 2089
123 Ga0373927_0101605 3300035695 Bacteria 1870
124 Ga0373927_0127890 3300035695 Bacteria 1659
125 Ga0373927_0194686 3300035695 Bacteria 1330
126 Ga0373933_0046849 3300035724 Bacteria 2569
127 Ga0373933_0264571 3300035724 Bacteria 1109
128 Ga0373933_0301625 3300035724 Unclassified 1037
129 Ga0373947_0000292 3300035725 Bacteria 28251
130 Ga0373947_0002300 3300035725 Bacteria 11557
131 Ga0373947_0127724 3300035725 Unclassified 1621
132 Ga0373947_0162581 3300035725 Unclassified 1445
133 Ga0373947_0166003 3300035725 Unclassified 1430
134 Ga0373937_0008749 3300036401 Bacteria 8787
135 Ga0373937_0019244 3300036401 Bacteria 6111
136 Ga0373937_0028753 3300036401 Bacteria 5032
137 Ga0373937_0049112 3300036401 Bacteria 3864
138 Ga0373937_0054809 3300036401 Bacteria 3659
139 Ga0373937_0119319 3300036401 Bacteria 2457
140 Ga0373937_0131370 3300036401 Bacteria 2339
141 Ga0373937_0188734 3300036401 Unclassified 1936
142 Ga0373925_0000284 3300037068 Bacteria 53141
143 Ga0373925_0001073 3300037068 Bacteria 24670
144 Ga0373925_0147198 3300037068 Unclassified 1847
145 Ga0373925_0358311 3300037068 Unclassified 1185
146 Ga0373925_0426825 3300037068 Bacteria 1084
147 Ga0436364_1485314 3300037853 Unclassified 1138
148 Ga0451807_2230020 3300041486 Unclassified 1222
149 Ga0495592_0138348 3300046454 Bacteria 1696
150 Ga0495651_0000642 3300046462 Bacteria 26999
151 Ga0495651_0066950 3300046462 Unclassified 2740
152 Ga0495653_0151128 3300046463 Unclassified 1622
153 Ga0495580_0002609 3300046472 Bacteria 15656
154 Ga0495580_0024602 3300046472 Bacteria 4406
155 Ga0495580_0033213 3300046472 Unclassified 3719
156 Ga0495580_0035734 3300046472 Bacteria 3572
157 Ga0495580_0131660 3300046472 Bacteria 1735
158 Ga0495580_0131721 3300046472 Bacteria 1734
159 Ga0495580_0139121 3300046472 Bacteria 1683
160 Ga0495580_0189511 3300046472 Bacteria 1419
161 Ga0495580_0276031 3300046472 Unclassified 1147
162 Ga0495580_0326001 3300046472 Bacteria 1043
163 Ga0495580_0334982 3300046472 Unclassified 1027
164 Ga0495580_0358104 3300046472 Bacteria 988
165 Ga0495662_0020272 3300046476 Bacteria 3215
166 Ga0495662_0126351 3300046476 Bacteria 1256
167 Ga0495664_0074370 3300046477 Bacteria 2032
168 Ga0495608_0076089 3300046511 Bacteria 2187
169 Ga0495618_0148119 3300046514 Bacteria 1500
170 Ga0495628_0036904 3300046516 Bacteria 3919
171 Ga0495630_0109592 3300046517 Unclassified 2091
172 Ga0495630_0110632 3300046517 Unclassified 2081
173 Ga0495630_0302280 3300046517 Bacteria 1223
174 Ga0495630_0633948 3300046517 Unclassified 819
175 Ga0495652_0045339 3300046529 Bacteria 3781
176 Ga0495665_0032879 3300046531 Bacteria 2775
177 Ga0495665_0136691 3300046531 Bacteria 1282
178 Ga0495665_0179430 3300046531 Bacteria 1101
179 Ga0495640_0006995 3300046533 Bacteria 8880
180 Ga0495586_0212349 3300046535 Unclassified 1098
181 Ga0495587_0068255 3300046536 Bacteria 2071
182 Ga0495587_0175458 3300046536 Unclassified 1216
183 Ga0495587_0213265 3300046536 Bacteria 1090
184 Ga0495645_0001566 3300046543 Bacteria 15490
185 Ga0495645_0004796 3300046543 Bacteria 9240
186 Ga0495667_0004896 3300046559 Bacteria 9054
187 Ga0495667_0017827 3300046559 Bacteria 4797
188 Ga0495667_0346252 3300046559 Unclassified 939
189 Ga0495634_0265774 3300046642 Bacteria 1045
190 Ga0495634_0299300 3300046642 Unclassified 973
191 Ga0495635_0062809 3300046663 Unclassified 2550
192 Ga0495635_0111252 3300046663 Unclassified 1871
193 Ga0495635_0145271 3300046663 Bacteria 1615
194 Ga0495657_0037495 3300046675 Bacteria 3341
195 Ga0495657_0069238 3300046675 Unclassified 2310
196 Ga0495599_0024130 3300046678 Unclassified 3803
197 Ga0495599_0039780 3300046678 Bacteria 2954
198 Ga0495623_0022332 3300046679 Bacteria 4087
199 Ga0495623_0208777 3300046679 Bacteria 1119
200 Ga0495646_0056550 3300046680 Bacteria 2352
201 Ga0495613_0049227 3300046689 Unclassified 3111
202 Ga0495600_0016623 3300046809 Bacteria 4674
203 Ga0495600_0282156 3300046809 Bacteria 1051
204 Ga0495581_0277220 3300047315 Unclassified 980
205 Ga0495604_0020092 3300047317 Bacteria 5338
206 Ga0495674_0038460 3300047319 Unclassified 4294
207 Ga0495674_0143983 3300047319 Bacteria 2002
208 Ga0495674_0220690 3300047319 Bacteria 1567
209 Ga0495674_0222502 3300047319 Bacteria 1560
210 Ga0495674_0423973 3300047319 Unclassified 1072
211 Ga0495680_0010691 3300047322 Bacteria 8185
212 Ga0495675_0003061 3300047444 Bacteria 10051
213 Ga0495675_0078641 3300047444 Bacteria 2077
214 Ga0495675_0166715 3300047444 Bacteria 1354
215 Ga0495684_0001668 3300047471 Bacteria 17834
216 Ga0495684_0004684 3300047471 Bacteria 10672
217 Ga0495684_0088770 3300047471 Bacteria 2343
218 Ga0495684_0095215 3300047471 Bacteria 2254
219 Ga0495684_0174788 3300047471 Bacteria 1595
220 Ga0495684_0439917 3300047471 Bacteria 908
221 Ga0495602_0004499 3300048088 Bacteria 14536
222 Ga0495602_0034450 3300048088 Bacteria 4737
223 Ga0495602_0253363 3300048088 Bacteria 1310
224 Ga0501249_005516 3300049679 Bacteria 2586
225 Ga0501221_056889 3300049704 Unclassified 895
226 nmdc:mga0qj67_31391_c1 3300050509 Bacteria 4138
227 nmdc:mga06r32_237036_c1 3300050510 Unclassified 1812
228 nmdc:mga06r32_299566_c1 3300050510 Bacteria 1594
229 Ga0495619_0306256 3300053085 Unclassified 1100
230 Ga0501082_0000433 3300060353 Bacteria 37136
231 Ga0070681_10281739
232 Ga0065707_10281927
233 Ga0070683_100245142
234 Ga0068869_100041254
235 Ga0070680_100138076
236 Ga0070680_100421369
237 Ga0070688_100161421
238 Ga0070714_100000693
239 Ga0070714_100000766
240 Ga0070713_100002273
241 Ga0070713_100012639
242 Ga0070713_100440105
243 Ga0070711_100039315
244 Ga0070711_100198300
245 Ga0070681_10003463
246 Ga0070681_10035660
247 Ga0070681_10039698
248 Ga0070706_100582569
249 Ga0070698_100395244
250 Ga0070684_100029805
251 Ga0070684_100095725
252 Ga0070684_100133997
253 Ga0070684_100316865
254 Ga0068853_100356319
255 Ga0068853_100378730
256 Ga0070695_100042267
257 Ga0070695_100046148
258 Ga0070696_100018575
259 Ga0070693_100144600
260 Ga0068857_100009085
261 Ga0068859_100038604
262 Ga0068859_100208317
263 Ga0068863_100195784
264 Ga0070717_10018793
265 Ga0070717_10095864
266 Ga0070717_10133453
267 Ga0097621_100010652
268 Ga0068871_100008286
269 Ga0068871_100422216
270 Ga0075431_100235537
271 Ga0068865_100051138
272 Ga0075436_100100505
273 Ga0075436_100422608
274 Ga0097620_100038604
275 Ga0097620_100208315
276 Ga0105240_10093501
277 Ga0105245_10000312
278 Ga0105245_10222711
279 Ga0105245_10274084
280 Ga0105241_10105109
281 Ga0105241_10106026
282 Ga0105242_10028275
283 Ga0105242_10405934
284 Ga0105248_10065693
285 Ga0105248_10077809
286 Ga0105248_10099641
287 Ga0105237_10015577
288 Ga0105238_10057126
289 Ga0105239_10018266
290 Ga0105246_10134840
291 Ga0157369_10026047
292 Ga0157369_10260352
293 Ga0157378_10001857
294 Ga0157378_10330020
295 Ga0163162_10577653
296 Ga0163162_10705259
297 Ga0157372_10005946
298 Ga0157372_10016201
299 Ga0157375_10165235
300 Ga0163163_10233992
301 Ga0157379_10047769
302 Ga0213875_10196175
303 Ga0207707_10004998
304 Ga0207707_10010240
305 Ga0207695_10345810
306 Ga0207671_10017826
307 Ga0207663_10011665
308 Ga0207694_10091604
309 Ga0207687_10005862
310 Ga0207687_10231002
311 Ga0207700_10000545
312 Ga0207700_10034291
313 Ga0207700_10220459
314 Ga0207664_10001688
315 Ga0207664_10015790
316 Ga0207709_10108321
317 Ga0207670_10463055
318 Ga0207704_10007686
319 Ga0207689_10077386
320 Ga0207689_10081641
321 Ga0207661_10012446
322 Ga0207702_10123295
323 Ga0207641_10058907
324 Ga0207674_10000852
325 Ga0265325_10016117
326 Ga0265325_10140841
327 Ga0265314_10009943
328 Ga0307413_10288037
329 Ga0373926_0084546
330 Ga0373934_0032531
331 Ga0373934_0042616
332 Ga0373934_0060065
333 Ga0373934_0067624
334 Ga0373934_0181804
335 Ga0373953_0038462
336 Ga0373954_0033396
337 Ga0373954_0093083
338 Ga0373956_0043771
339 Ga0373957_0163577
340 Ga0373943_0003420
341 Ga0373946_0038437
342 Ga0373955_0087592
343 Ga0373924_0100187
344 Ga0373935_0112696
345 Ga0373935_0325487
346 Ga0373927_0001220
347 Ga0373927_0002216
348 Ga0373927_0014629
349 Ga0373927_0016491
350 Ga0373927_0016689
351 Ga0373927_0045753
352 Ga0373927_0082070
353 Ga0373927_0101605
354 Ga0373927_0127890
355 Ga0373927_0194686
356 Ga0373933_0046849
357 Ga0373933_0264571
358 Ga0373933_0301625
359 Ga0373947_0000292
360 Ga0373947_0002300
361 Ga0373947_0127724
362 Ga0373947_0162581
363 Ga0373947_0166003
364 Ga0373937_0008749
365 Ga0373937_0019244
366 Ga0373937_0028753
367 Ga0373937_0049112
368 Ga0373937_0054809
369 Ga0373937_0119319
370 Ga0373937_0131370
371 Ga0373937_0188734
372 Ga0373925_0000284
373 Ga0373925_0001073
374 Ga0373925_0147198
375 Ga0373925_0358311
376 Ga0373925_0426825
377 Ga0436364_1485314
378 Ga0451807_2230020
379 Ga0495592_0138348
380 Ga0495651_0000642
381 Ga0495651_0066950
382 Ga0495653_0151128
383 Ga0495580_0002609
384 Ga0495580_0024602
385 Ga0495580_0033213
386 Ga0495580_0035734
387 Ga0495580_0131660
388 Ga0495580_0131721
389 Ga0495580_0139121
390 Ga0495580_0189511
391 Ga0495580_0276031
392 Ga0495580_0326001
393 Ga0495580_0334982
394 Ga0495580_0358104
395 Ga0495662_0020272
396 Ga0495662_0126351
397 Ga0495664_0074370
398 Ga0495608_0076089
399 Ga0495618_0148119
400 Ga0495628_0036904
401 Ga0495630_0109592
402 Ga0495630_0110632
403 Ga0495630_0302280
404 Ga0495630_0633948
405 Ga0495652_0045339
406 Ga0495665_0032879
407 Ga0495665_0136691
408 Ga0495665_0179430
409 Ga0495640_0006995
410 Ga0495586_0212349
411 Ga0495587_0068255
412 Ga0495587_0175458
413 Ga0495587_0213265
414 Ga0495645_0001566
415 Ga0495645_0004796
416 Ga0495667_0004896
417 Ga0495667_0017827
418 Ga0495667_0346252
419 Ga0495634_0265774
420 Ga0495634_0299300
421 Ga0495635_0062809
422 Ga0495635_0111252
423 Ga0495635_0145271
424 Ga0495657_0037495
425 Ga0495657_0069238
426 Ga0495599_0024130
427 Ga0495599_0039780
428 Ga0495623_0022332
429 Ga0495623_0208777
430 Ga0495646_0056550
431 Ga0495613_0049227
432 Ga0495600_0016623
433 Ga0495600_0282156
434 Ga0495581_0277220
435 Ga0495604_0020092
436 Ga0495674_0038460
437 Ga0495674_0143983
438 Ga0495674_0220690
439 Ga0495674_0222502
440 Ga0495674_0423973
441 Ga0495680_0010691
442 Ga0495675_0003061
443 Ga0495675_0078641
444 Ga0495675_0166715
445 Ga0495684_0001668
446 Ga0495684_0004684
447 Ga0495684_0088770
448 Ga0495684_0095215
449 Ga0495684_0174788
450 Ga0495684_0439917
451 Ga0495602_0004499
452 Ga0495602_0034450
453 Ga0495602_0253363
454 Ga0501249_005516
455 Ga0501221_056889
456 nmdc:mga0qj67_31391_c1
457 nmdc:mga06r32_237036_c1
458 nmdc:mga06r32_299566_c1
459 Ga0495619_0306256
460 Ga0501082_0000433

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00582

Usp

Universal stress protein family

35

174

0.98

PF00582

Usp

Universal stress protein family

186

320

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3hgm-assembly2.cif.gz_D universal stress protein tead from the trap transporter teaabc of halomonas elongata 0.8339 4 139
3hgm-assembly2.cif.gz_C universal stress protein tead from the trap transporter teaabc of halomonas elongata 0.8253 4 139
2pfs-assembly1.cif.gz_A-2 crystal structure of universal stress protein from nitrosomonas europaea 0.8162 1 139
3hgm-assembly1.cif.gz_B universal stress protein tead from the trap transporter teaabc of halomonas elongata 0.8095 4 139
3hgm-assembly2.cif.gz_C universal stress protein tead from the trap transporter teaabc of halomonas elongata 0.8084 4 139
ID Description Score Start End Superfamily
2pfsA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8394 6 139 3.40.50.620
3hgmC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8253 4 139 3.40.50.620
af_P46888_2_140_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8151 153 286 3.40.50.620
3hgmC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8084 4 139 3.40.50.620
af_Q57951_25_170_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8028 4 139 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A2N9MRV9-F1-model_v4 UspA domain protein 0.8777 1 286
AF-A0A7Y5GEG4-F1-model_v4 Universal stress protein 0.8763 1 286
AF-A0A7C7Z9R0-F1-model_v4 deleted 0.8756 3 139
AF-A0A2N9MRV9-F1-model_v4 UspA domain protein 0.8748 1 286
AF-A0A7Y5GEG4-F1-model_v4 Universal stress protein 0.8733 1 286

Map