F340402

General Info

Members Datasets Scaffolds Average Seq Length
227 145 454 577

Family's Representative Sequence

Representative Sequence 3300050510|nmdc:mga06r32_96969_c1|nmdc:mga06r32_96969_c1_729_2594
Length 621
Sequence LRGFAIDDERWMEYAMMRPTEERLMTQSRSSLEPGPRAAIRSHHLMNGAMFIGECLKQEGVTKVFGQCGHTNYALIDACHRLGIDYVSFRHEQLAAHAADAYFRVSHKLAVVNVHLSPGLTNALTGVVTAAADSTPMIVFAGNTPSYHHAREPHQGIRFHADASQGDIFRPICKRVWRVDDAKFLADVMPRALNVAQTGRPGPVLIDVPMDVFSQQIDVPANTVARRPEYDRFVAPHDGIADAARLLASATRPVVFAGNGVLLSEATRELRQLAELLRIPVATTLMGKGTFPERDPLALGMTGIWGTAVANAATKAADVVLAVGTTFGEADCSSWDPRFTFAIPPTRLIQIDIDPQEIGKIYPVEVGLVGDARATITELIRHLRDLGPIVDDHSRVARLAQERAAWEAQLRESQQDSGRPIHPARLLHEISKVVSDDAIFVTDVGWNKNGAGQQLQVSQPGAFITSGGMATMGFAPGAAIGAKIGAPDRKVICLVGDGGLLSAVGALATAVELGIPVLWIVFNNFCFSTIRTVGTTYFNNSYGTEFTTPDGRPYNPDFPLLARAFGIDGAQVLDPNDLRPALEKALAVDAPYLLEVQTRADVPMPRTGHWDIADFLRLGND

Samples

Sample ID Description Type Environment
1 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
101 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
104 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
105 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
106 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
107 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
108 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
109 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
110 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
111 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
112 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
113 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
114 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
115 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
116 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
117 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
118 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
119 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
120 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
121 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
122 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
123 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
124 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
125 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
127 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
128 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
129 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
130 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
131 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
132 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
133 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
134 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
135 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
136 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
137 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
138 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
139 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
140 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
141 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
142 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
143 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
144 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
145 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.56
Metatranscriptomes 0
Isolates 0.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.61
Nodule 0
Rhizoplane 2.2
Rhizosphere 89.43
Stem 0
Stem Tuber 0
Unclassified 4.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga06r32_96969_c1 3300050510 Bacteria 2888
2 JGI25406J46586_10000300 3300003203 Bacteria 22188
3 JGI25406J46586_10006935 3300003203 Bacteria 5198
4 Ga0065704_10104809 3300005289 Unclassified 2129
5 Ga0065707_10003749 3300005295 Bacteria 4643
6 Ga0070676_10071319 3300005328 Unclassified 2086
7 Ga0070670_100002415 3300005331 Bacteria 15390
8 Ga0070670_100002880 3300005331 Bacteria 14237
9 Ga0068869_100023581 3300005334 Bacteria 4253
10 Ga0070666_10046157 3300005335 Bacteria 2922
11 Ga0070689_100092244 3300005340 Bacteria 2389
12 Ga0070668_100007670 3300005347 Bacteria 8008
13 Ga0070669_100017837 3300005353 Bacteria 5067
14 Ga0070669_100022934 3300005353 Bacteria 4465
15 Ga0070669_100102989 3300005353 Bacteria 2156
16 Ga0070675_100012952 3300005354 Bacteria 6546
17 Ga0070675_100075222 3300005354 Bacteria 2807
18 Ga0070671_100002557 3300005355 Bacteria 14098
19 Ga0070673_100016431 3300005364 Bacteria 5234
20 Ga0070673_100023798 3300005364 Bacteria 4480
21 Ga0070688_100037503 3300005365 Bacteria 2954
22 Ga0070688_100050751 3300005365 Bacteria 2585
23 Ga0070667_100039916 3300005367 Bacteria 3935
24 Ga0070667_100121089 3300005367 Bacteria 2276
25 Ga0070713_100007072 3300005436 Bacteria 7842
26 Ga0070705_100027394 3300005440 Bacteria 3111
27 Ga0070700_100083802 3300005441 Bacteria 2065
28 Ga0070678_100005510 3300005456 Bacteria 7332
29 Ga0070678_100019984 3300005456 Bacteria 4384
30 Ga0070662_100071474 3300005457 Bacteria 2559
31 Ga0068867_100009285 3300005459 Bacteria 6942
32 Ga0068867_100094340 3300005459 Bacteria 2275
33 Ga0070698_100080539 3300005471 Bacteria 3251
34 Ga0070699_100045413 3300005518 Bacteria 3802
35 Ga0068853_100073365 3300005539 Bacteria 2984
36 Ga0070672_100005415 3300005543 Bacteria 8456
37 Ga0070672_100037614 3300005543 Bacteria 3693
38 Ga0070696_100028668 3300005546 Archaea 3799
39 Ga0070665_100010907 3300005548 Bacteria 9191
40 Ga0068857_100009517 3300005577 Bacteria 8438
41 Ga0068859_100083044 3300005617 Bacteria 3246
42 Ga0068864_100000918 3300005618 Bacteria 24714
43 Ga0068864_100006818 3300005618 Bacteria 9356
44 Ga0068864_100052186 3300005618 Bacteria 3525
45 Ga0068864_100061975 3300005618 Bacteria 3240
46 Ga0068863_100008866 3300005841 Bacteria 9821
47 Ga0068863_100071309 3300005841 Bacteria 3286
48 Ga0068858_100023607 3300005842 Bacteria 5729
49 Ga0068860_100107727 3300005843 Unclassified 2663
50 Ga0081539_10000025 3300005985 Bacteria 340255
51 Ga0081539_10000993 3300005985 Bacteria 52701
52 Ga0081539_10002557 3300005985 Bacteria 25249
53 Ga0070717_10073703 3300006028 Bacteria 2854
54 Ga0075365_10007373 3300006038 Bacteria 6152
55 Ga0075364_10002311 3300006051 Bacteria 10685
56 Ga0075362_10013295 3300006177 Bacteria 3293
57 Ga0097621_100000508 3300006237 Bacteria 27247
58 Ga0097621_100010771 3300006237 Bacteria 6708
59 Ga0097621_100012423 3300006237 Bacteria 6313
60 Ga0068871_100002175 3300006358 Bacteria 13309
61 Ga0068871_100003824 3300006358 Bacteria 10376
62 Ga0068871_100034886 3300006358 Bacteria 3995
63 Ga0075428_100040108 3300006844 Bacteria 5153
64 Ga0075428_100128408 3300006844 Bacteria 2758
65 Ga0075430_100056081 3300006846 Bacteria 3313
66 Ga0075433_10002137 3300006852 Bacteria 14960
67 Ga0075433_10002227 3300006852 Bacteria 14709
68 Ga0075434_100003533 3300006871 Bacteria 13951
69 Ga0075429_100062273 3300006880 Bacteria 3251
70 Ga0068865_100001529 3300006881 Bacteria 13503
71 Ga0068865_100004743 3300006881 Bacteria 8213
72 Ga0068865_100128688 3300006881 Bacteria 1894
73 Ga0075436_100000666 3300006914 Bacteria 22605
74 Ga0097620_100083052 3300006931 Bacteria 3246
75 Ga0075435_100000450 3300007076 Bacteria 25173
76 Ga0105240_10026394 3300009093 Bacteria 7620
77 Ga0105240_10111352 3300009093 Bacteria 3312
78 Ga0111539_10000413 3300009094 Bacteria 53529
79 Ga0111539_10003851 3300009094 Bacteria 19747
80 Ga0111539_10062270 3300009094 Bacteria 4417
81 Ga0111539_10111868 3300009094 Unclassified 3204
82 Ga0105247_10002617 3300009101 Bacteria 12153
83 Ga0114129_10012075 3300009147 Bacteria 12294
84 Ga0114129_10023694 3300009147 Bacteria 8702
85 Ga0114129_10076196 3300009147 Bacteria 4670
86 Ga0114129_10115313 3300009147 Bacteria 3703
87 Ga0114129_10138173 3300009147 Bacteria 3343
88 Ga0114129_10235428 3300009147 Bacteria 2464
89 Ga0105241_10007429 3300009174 Bacteria 8067
90 Ga0105242_10000406 3300009176 Bacteria 34292
91 Ga0105242_10004880 3300009176 Bacteria 10383
92 Ga0105242_10010921 3300009176 Bacteria 6976
93 Ga0105248_10005190 3300009177 Bacteria 14357
94 Ga0105248_10006697 3300009177 Bacteria 12638
95 Ga0105248_10042306 3300009177 Bacteria 5109
96 Ga0105248_10063765 3300009177 Bacteria 4136
97 Ga0105237_10015069 3300009545 Bacteria 8057
98 Ga0105237_10038874 3300009545 Bacteria 4805
99 Ga0105238_10014369 3300009551 Bacteria 8000
100 Ga0105249_10002082 3300009553 Bacteria 17350
101 Ga0105239_10002843 3300010375 Bacteria 21654
102 Ga0157374_10036273 3300013296 Bacteria 4515
103 Ga0157378_10009023 3300013297 Bacteria 8681
104 Ga0163162_10029967 3300013306 Bacteria 5388
105 Ga0157375_10026825 3300013308 Bacteria 5376
106 Ga0157375_10040931 3300013308 Bacteria 4471
107 Ga0163163_10000915 3300014325 Bacteria 25032
108 Ga0163163_10031753 3300014325 Bacteria 5099
109 Ga0157380_10000423 3300014326 Bacteria 25675
110 Ga0157380_10036027 3300014326 Bacteria 3826
111 Ga0157380_10040398 3300014326 Bacteria 3633
112 Ga0157379_10066413 3300014968 Bacteria 3225
113 Ga0157379_10077506 3300014968 Bacteria 2976
114 Ga0157376_10007819 3300014969 Bacteria 7665
115 Ga0157376_10009430 3300014969 Bacteria 7087
116 Ga0207682_10000185 3300025893 Bacteria 28231
117 Ga0207642_10042336 3300025899 Bacteria 2001
118 Ga0207710_10020579 3300025900 Bacteria 2822
119 Ga0207680_10057196 3300025903 Bacteria 2359
120 Ga0207643_10013615 3300025908 Bacteria 4407
121 Ga0207654_10004301 3300025911 Bacteria 7181
122 Ga0207693_10030970 3300025915 Bacteria 4226
123 Ga0207681_10011480 3300025923 Bacteria 5444
124 Ga0207694_10003420 3300025924 Bacteria 12633
125 Ga0207650_10031018 3300025925 Bacteria 3856
126 Ga0207650_10064886 3300025925 Bacteria 2734
127 Ga0207659_10001466 3300025926 Bacteria 14067
128 Ga0207659_10018873 3300025926 Bacteria 4528
129 Ga0207659_10028602 3300025926 Bacteria 3790
130 Ga0207659_10029292 3300025926 Bacteria 3751
131 Ga0207687_10003171 3300025927 Bacteria 11162
132 Ga0207644_10002921 3300025931 Bacteria 11009
133 Ga0207644_10072660 3300025931 Bacteria 2520
134 Ga0207706_10063700 3300025933 Bacteria 3245
135 Ga0207686_10004194 3300025934 Bacteria 7733
136 Ga0207686_10011755 3300025934 Bacteria 4801
137 Ga0207669_10111426 3300025937 Bacteria 1835
138 Ga0207704_10017124 3300025938 Bacteria 3748
139 Ga0207691_10002856 3300025940 Bacteria 16821
140 Ga0207691_10015889 3300025940 Bacteria 7152
141 Ga0207691_10036001 3300025940 Bacteria 4588
142 Ga0207711_10010743 3300025941 Bacteria 7615
143 Ga0207711_10037641 3300025941 Bacteria 4111
144 Ga0207711_10091798 3300025941 Bacteria 2671
145 Ga0207689_10053104 3300025942 Bacteria 3339
146 Ga0207661_10012565 3300025944 Bacteria 6158
147 Ga0207668_10032580 3300025972 Bacteria 3445
148 Ga0207658_10105420 3300025986 Bacteria 2217
149 Ga0207677_10003015 3300026023 Bacteria 8893
150 Ga0207703_10046806 3300026035 Bacteria 3486
151 Ga0207703_10078868 3300026035 Bacteria 2738
152 Ga0207641_10004047 3300026088 Bacteria 12785
153 Ga0207641_10046021 3300026088 Bacteria 3677
154 Ga0207648_10005047 3300026089 Bacteria 13389
155 Ga0207648_10019255 3300026089 Bacteria 6161
156 Ga0207676_10006037 3300026095 Bacteria 8542
157 Ga0207676_10006794 3300026095 Bacteria 8099
158 Ga0207676_10114320 3300026095 Unclassified 2264
159 Ga0207674_10063599 3300026116 Bacteria 3725
160 Ga0207683_10002379 3300026121 Bacteria 16425
161 Ga0207428_10001643 3300027907 Bacteria 23262
162 Ga0207428_10002730 3300027907 Bacteria 17585
163 Ga0207428_10026576 3300027907 Bacteria 4830
164 Ga0207428_10036375 3300027907 Bacteria 4016
165 Ga0207428_10058525 3300027907 Bacteria 3057
166 Ga0268266_10006163 3300028379 Bacteria 11024
167 Ga0268264_10130448 3300028381 Unclassified 2227
168 Ga0307515_10020975 3300028794 Bacteria 11612
169 Ga0265329_10022712 3300031242 Bacteria 2096
170 Ga0436364_0769771 3300037853 Unclassified 4842
171 Ga0436360_0725598 3300039438 Bacteria 3320
172 Ga0495590_0000640 3300046457 Bacteria 16220
173 Ga0495638_0000615 3300046460 Bacteria 39639
174 Ga0495651_0016277 3300046462 Bacteria 5758
175 Ga0495610_0000759 3300046512 Bacteria 30445
176 Ga0495630_0074438 3300046517 Bacteria 2558
177 Ga0495631_0001144 3300046518 Bacteria 16441
178 Ga0495598_0004428 3300046537 Bacteria 3041
179 Ga0495621_0014869 3300046539 Bacteria 2472
180 Ga0495658_0021684 3300046683 Bacteria 3390
181 Ga0495613_0017469 3300046689 Bacteria 5342
182 Ga0495636_0000751 3300047318 Bacteria 11934
183 Ga0495684_0000122 3300047471 Bacteria 56703
184 Ga0495686_0000284 3300047472 Bacteria 89023
185 Ga0496112_0003516 3300048915 Bacteria 12987
186 Ga0496112_0135308 3300048915 Bacteria 2435
187 Ga0496113_0008131 3300048916 Bacteria 6811
188 Ga0496114_0050007 3300048917 Bacteria 3479
189 Ga0496114_0207826 3300048917 Unclassified 1716
190 Ga0496125_0005780 3300048928 Bacteria 13584
191 Ga0495678_000781 3300049459 Bacteria 28567
192 Ga0501033_0017258 3300049570 Bacteria 5454
193 Ga0501046_0011670 3300049580 Bacteria 7509
194 nmdc:mga00v17_13423_c2 3300050491 Bacteria 1870
195 nmdc:mga06z11_52973_c1 3300050494 Bacteria 2085
196 nmdc:mga05p37_75858_c1 3300050507 Bacteria 4139
197 nmdc:mga05p37_78221_c1 3300050507 Bacteria 4072
198 nmdc:mga05p37_95053_c1 3300050507 Bacteria 3672
199 nmdc:mga06r32_43222_c1 3300050510 Bacteria 4287
200 nmdc:mga06r32_73508_c1 3300050510 Unclassified 3312
201 nmdc:mga08y16_103791_c1 3300050511 Unclassified 2960
202 nmdc:mga08y16_118629_c1 3300050511 Bacteria 2754
203 nmdc:mga08y16_15689_c1 3300050511 Bacteria 7968
204 nmdc:mga08y16_2523_c1 3300050511 Bacteria 18810
205 nmdc:mga08y16_563_c1 3300050511 Bacteria 34402
206 nmdc:mga08y16_763_c1 3300050511 Bacteria 30631
207 nmdc:mga0n895_10061_c1 3300050512 Bacteria 8322
208 nmdc:mga0n895_74658_c1 3300050512 Bacteria 3369
209 nmdc:mga0rr50_201_c1 3300050513 Bacteria 32622
210 nmdc:mga08x19_2093_c1 3300050514 Bacteria 12201
211 nmdc:mga0a205_100536_c1 3300050515 Bacteria 2790
212 nmdc:mga0a205_57127_c1 3300050515 Bacteria 3768
213 nmdc:mga0a205_6835_c1 3300050515 Bacteria 10322
214 nmdc:mga0a205_779_c1 3300050515 Bacteria 25847
215 Ga0495595_0058590 3300053084 Bacteria 1799
216 Ga0500578_0000234 3300053086 Bacteria 68455
217 Ga0500643_000253 3300053087 Bacteria 49256
218 Ga0500641_0008259 3300053096 Bacteria 3713
219 Ga0500556_0001484 3300053104 Bacteria 9770
220 Ga0500562_002638 3300053108 Bacteria 4461
221 Ga0500562_011641 3300053108 Bacteria 2233
222 Ga0500594_0000598 3300053118 Bacteria 7725
223 Ga0500622_0000047 3300053156 Bacteria 149427
224 Ga0500622_0009699 3300053156 Bacteria 5320
225 Ga0500645_000845 3300053730 Bacteria 18019
226 Ga0501082_0037154 3300060353 Bacteria 4197
227 2977240767 2977240413 Bacteria 3191065
228 nmdc:mga06r32_96969_c1
229 JGI25406J46586_10000300
230 JGI25406J46586_10006935
231 Ga0065704_10104809
232 Ga0065707_10003749
233 Ga0070676_10071319
234 Ga0070670_100002415
235 Ga0070670_100002880
236 Ga0068869_100023581
237 Ga0070666_10046157
238 Ga0070689_100092244
239 Ga0070668_100007670
240 Ga0070669_100017837
241 Ga0070669_100022934
242 Ga0070669_100102989
243 Ga0070675_100012952
244 Ga0070675_100075222
245 Ga0070671_100002557
246 Ga0070673_100016431
247 Ga0070673_100023798
248 Ga0070688_100037503
249 Ga0070688_100050751
250 Ga0070667_100039916
251 Ga0070667_100121089
252 Ga0070713_100007072
253 Ga0070705_100027394
254 Ga0070700_100083802
255 Ga0070678_100005510
256 Ga0070678_100019984
257 Ga0070662_100071474
258 Ga0068867_100009285
259 Ga0068867_100094340
260 Ga0070698_100080539
261 Ga0070699_100045413
262 Ga0068853_100073365
263 Ga0070672_100005415
264 Ga0070672_100037614
265 Ga0070696_100028668
266 Ga0070665_100010907
267 Ga0068857_100009517
268 Ga0068859_100083044
269 Ga0068864_100000918
270 Ga0068864_100006818
271 Ga0068864_100052186
272 Ga0068864_100061975
273 Ga0068863_100008866
274 Ga0068863_100071309
275 Ga0068858_100023607
276 Ga0068860_100107727
277 Ga0081539_10000025
278 Ga0081539_10000993
279 Ga0081539_10002557
280 Ga0070717_10073703
281 Ga0075365_10007373
282 Ga0075364_10002311
283 Ga0075362_10013295
284 Ga0097621_100000508
285 Ga0097621_100010771
286 Ga0097621_100012423
287 Ga0068871_100002175
288 Ga0068871_100003824
289 Ga0068871_100034886
290 Ga0075428_100040108
291 Ga0075428_100128408
292 Ga0075430_100056081
293 Ga0075433_10002137
294 Ga0075433_10002227
295 Ga0075434_100003533
296 Ga0075429_100062273
297 Ga0068865_100001529
298 Ga0068865_100004743
299 Ga0068865_100128688
300 Ga0075436_100000666
301 Ga0097620_100083052
302 Ga0075435_100000450
303 Ga0105240_10026394
304 Ga0105240_10111352
305 Ga0111539_10000413
306 Ga0111539_10003851
307 Ga0111539_10062270
308 Ga0111539_10111868
309 Ga0105247_10002617
310 Ga0114129_10012075
311 Ga0114129_10023694
312 Ga0114129_10076196
313 Ga0114129_10115313
314 Ga0114129_10138173
315 Ga0114129_10235428
316 Ga0105241_10007429
317 Ga0105242_10000406
318 Ga0105242_10004880
319 Ga0105242_10010921
320 Ga0105248_10005190
321 Ga0105248_10006697
322 Ga0105248_10042306
323 Ga0105248_10063765
324 Ga0105237_10015069
325 Ga0105237_10038874
326 Ga0105238_10014369
327 Ga0105249_10002082
328 Ga0105239_10002843
329 Ga0157374_10036273
330 Ga0157378_10009023
331 Ga0163162_10029967
332 Ga0157375_10026825
333 Ga0157375_10040931
334 Ga0163163_10000915
335 Ga0163163_10031753
336 Ga0157380_10000423
337 Ga0157380_10036027
338 Ga0157380_10040398
339 Ga0157379_10066413
340 Ga0157379_10077506
341 Ga0157376_10007819
342 Ga0157376_10009430
343 Ga0207682_10000185
344 Ga0207642_10042336
345 Ga0207710_10020579
346 Ga0207680_10057196
347 Ga0207643_10013615
348 Ga0207654_10004301
349 Ga0207693_10030970
350 Ga0207681_10011480
351 Ga0207694_10003420
352 Ga0207650_10031018
353 Ga0207650_10064886
354 Ga0207659_10001466
355 Ga0207659_10018873
356 Ga0207659_10028602
357 Ga0207659_10029292
358 Ga0207687_10003171
359 Ga0207644_10002921
360 Ga0207644_10072660
361 Ga0207706_10063700
362 Ga0207686_10004194
363 Ga0207686_10011755
364 Ga0207669_10111426
365 Ga0207704_10017124
366 Ga0207691_10002856
367 Ga0207691_10015889
368 Ga0207691_10036001
369 Ga0207711_10010743
370 Ga0207711_10037641
371 Ga0207711_10091798
372 Ga0207689_10053104
373 Ga0207661_10012565
374 Ga0207668_10032580
375 Ga0207658_10105420
376 Ga0207677_10003015
377 Ga0207703_10046806
378 Ga0207703_10078868
379 Ga0207641_10004047
380 Ga0207641_10046021
381 Ga0207648_10005047
382 Ga0207648_10019255
383 Ga0207676_10006037
384 Ga0207676_10006794
385 Ga0207676_10114320
386 Ga0207674_10063599
387 Ga0207683_10002379
388 Ga0207428_10001643
389 Ga0207428_10002730
390 Ga0207428_10026576
391 Ga0207428_10036375
392 Ga0207428_10058525
393 Ga0268266_10006163
394 Ga0268264_10130448
395 Ga0307515_10020975
396 Ga0265329_10022712
397 Ga0436364_0769771
398 Ga0436360_0725598
399 Ga0495590_0000640
400 Ga0495638_0000615
401 Ga0495651_0016277
402 Ga0495610_0000759
403 Ga0495630_0074438
404 Ga0495631_0001144
405 Ga0495598_0004428
406 Ga0495621_0014869
407 Ga0495658_0021684
408 Ga0495613_0017469
409 Ga0495636_0000751
410 Ga0495684_0000122
411 Ga0495686_0000284
412 Ga0496112_0003516
413 Ga0496112_0135308
414 Ga0496113_0008131
415 Ga0496114_0050007
416 Ga0496114_0207826
417 Ga0496125_0005780
418 Ga0495678_000781
419 Ga0501033_0017258
420 Ga0501046_0011670
421 nmdc:mga00v17_13423_c2
422 nmdc:mga06z11_52973_c1
423 nmdc:mga05p37_75858_c1
424 nmdc:mga05p37_78221_c1
425 nmdc:mga05p37_95053_c1
426 nmdc:mga06r32_43222_c1
427 nmdc:mga06r32_73508_c1
428 nmdc:mga08y16_103791_c1
429 nmdc:mga08y16_118629_c1
430 nmdc:mga08y16_15689_c1
431 nmdc:mga08y16_2523_c1
432 nmdc:mga08y16_563_c1
433 nmdc:mga08y16_763_c1
434 nmdc:mga0n895_10061_c1
435 nmdc:mga0n895_74658_c1
436 nmdc:mga0rr50_201_c1
437 nmdc:mga08x19_2093_c1
438 nmdc:mga0a205_100536_c1
439 nmdc:mga0a205_57127_c1
440 nmdc:mga0a205_6835_c1
441 nmdc:mga0a205_779_c1
442 Ga0495595_0058590
443 Ga0500578_0000234
444 Ga0500643_000253
445 Ga0500641_0008259
446 Ga0500556_0001484
447 Ga0500562_002638
448 Ga0500562_011641
449 Ga0500594_0000598
450 Ga0500622_0000047
451 Ga0500622_0009699
452 Ga0500645_000845
453 Ga0501082_0037154
454 2977240767

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02776

TPP_enzyme_N

Thiamine pyrophosphate enzyme, N-terminal TPP binding domain

46

164

0.95

PF00205

TPP_enzyme_M

Thiamine pyrophosphate enzyme, central domain

240

379

0.93

PF02775

TPP_enzyme_C

Thiamine pyrophosphate enzyme, C-terminal TPP binding domain

443

596

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3eya-assembly2.cif.gz_G structural basis for membrane binding and catalytic activation of the peripheral membrane enzyme pyruvate oxidase from escherichia coli 0.9197 1 555
3eya-assembly3.cif.gz_K structural basis for membrane binding and catalytic activation of the peripheral membrane enzyme pyruvate oxidase from escherichia coli 0.9121 1 555
3eya-assembly2.cif.gz_G structural basis for membrane binding and catalytic activation of the peripheral membrane enzyme pyruvate oxidase from escherichia coli 0.9112 1 555
6lpi-assembly3.cif.gz_C crystal structure of ahas holo-enzyme 0.9075 1 560
4rjk-assembly1.cif.gz_D acetolactate synthase from bacillus subtilis bound to lthdp - crystal form ii 0.9063 2 551
ID Description Score Start End Superfamily
4rjiC03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9352 371 551 3.40.50.970
af_P9WG39_359_545_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9319 373 559 3.40.50.970
4d5eA03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9177 371 553 3.40.50.970
1yhzA03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9137 371 556 3.40.50.970
af_P0DP89_182_327_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9131 191 334 3.40.50.1220
ID Description Score Start End GO Terms
AF-A0A2I3NA11-F1-model_v4 2-hydroxyacyl-CoA lyase 1 0.9592 1 96 GO:0001561
GO:0005777
GO:0016829
GO:0030976
AF-A0A536W973-F1-model_v4 Thiamine pyrophosphate-binding protein 0.9454 1 516 GO:0000287
GO:0003984
GO:0005948
GO:0009097
GO:0009099
GO:0030976
GO:0050660
AF-A0A2W5XBM8-F1-model_v4 Acetolactate synthase 0.9387 1 556 GO:0000287
GO:0003984
GO:0005948
GO:0009097
GO:0009099
GO:0030976
GO:0050660
AF-A0A356UI88-F1-model_v4 Pyruvate dehydrogenase 0.9372 1 556 GO:0000287
GO:0003824
GO:0016020
GO:0030976
AF-A0A2V7B6U9-F1-model_v4 Thiamine pyrophosphate-binding protein 0.9367 1 554 GO:0000287
GO:0003984
GO:0005948
GO:0009097
GO:0009099
GO:0030976
GO:0050660

Map