F339105

General Info

Members Datasets Scaffolds Average Seq Length
226 148 452 296

Family's Representative Sequence

Representative Sequence 3300042436|Ga0439435_0012061|Ga0439435_0012061_877_1884
Length 335
Sequence MVSNRSDVRRAASVNPASVAVSESTLDRTIVERLHRKARGDRWSLPIEVFASALETSARKAFASSSADARQLERYFDALHLEDLALACACALGSDAAWEHFIREYRPGLYRAADAIDPTGGARDLADSLYGELFGLDVRDGERRSHFRYFHGRSTLATWLRAVLSQRHIDRLRSVRRQDPLPEDEAPDAIAAPRDEADPRQAGYIRVMRGSLTAAVAALAPRDRLRLRCYYAQNLTLAQIGRVLNESEATASRHLSRVRREVRAVVESDLRAQRMSDAEIADCIAAVVSDSAYLDMAQIMGSDPTSGSELGSDPIRKDARLERSKGKERSREGQR

Samples

Sample ID Description Type Environment
1 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
85 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
87 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
88 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
89 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
90 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
91 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
92 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
93 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
94 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
95 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
96 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
97 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
98 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
99 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
100 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
101 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
102 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
103 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
104 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
105 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
106 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
107 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
108 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
109 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
110 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
111 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
112 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
113 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
114 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
115 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
116 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
127 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
128 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
129 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
130 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
131 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
132 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
135 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
136 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
138 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
139 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
140 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
141 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
142 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
143 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
144 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
145 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
146 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
147 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
148 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4.42
Rhizosphere 95.58
Stem 0
Stem Tuber 0
Unclassified 20.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439435_0012061 3300042436 Bacteria 2085
2 Ga0065712_10068473 3300005290 Bacteria 10415
3 Ga0065712_10118296 3300005290 Bacteria 1708
4 Ga0070676_10019060 3300005328 Unclassified 3813
5 Ga0070683_100016981 3300005329 Bacteria 6423
6 Ga0070683_100784618 3300005329 Bacteria 913
7 Ga0070690_100032905 3300005330 Unclassified 3242
8 Ga0070670_100015373 3300005331 Bacteria 6572
9 Ga0070666_10131111 3300005335 Bacteria 1742
10 Ga0070689_100207037 3300005340 Archaea 1604
11 Ga0070689_100310554 3300005340 Bacteria 1314
12 Ga0070687_100158302 3300005343 Bacteria 1336
13 Ga0070692_10089440 3300005345 Bacteria 1671
14 Ga0070669_100161019 3300005353 Bacteria 1744
15 Ga0070669_100442135 3300005353 Bacteria 1070
16 Ga0070675_100004986 3300005354 Bacteria 10135
17 Ga0070671_100069974 3300005355 Bacteria 2927
18 Ga0070674_100073642 3300005356 Unclassified 2421
19 Ga0070673_100050998 3300005364 Bacteria 3238
20 Ga0070701_10016368 3300005438 Bacteria 3446
21 Ga0070705_100002193 3300005440 Bacteria 9905
22 Ga0070694_100001751 3300005444 Bacteria 12819
23 Ga0070694_100127493 3300005444 Bacteria 1834
24 Ga0070678_100068025 3300005456 Unclassified 2653
25 Ga0068867_100144122 3300005459 Unclassified 1865
26 Ga0070685_10018821 3300005466 Unclassified 3720
27 Ga0070698_100173086 3300005471 Unclassified 2099
28 Ga0070699_100000457 3300005518 Bacteria 39196
29 Ga0070679_100263921 3300005530 Bacteria 1677
30 Ga0070697_100312971 3300005536 Unclassified 1351
31 Ga0070672_100065871 3300005543 Bacteria 2867
32 Ga0070686_100071258 3300005544 Bacteria 2274
33 Ga0070695_100000230 3300005545 Bacteria 27680
34 Ga0070695_100095137 3300005545 Bacteria 1996
35 Ga0070696_100000912 3300005546 Bacteria 19224
36 Ga0070665_100006579 3300005548 Bacteria 11812
37 Ga0070704_100080169 3300005549 Bacteria 2400
38 Ga0070704_100102407 3300005549 Unclassified 2160
39 Ga0070664_100097387 3300005564 Bacteria 2554
40 Ga0070702_100003892 3300005615 Bacteria 6762
41 Ga0070702_100023384 3300005615 Bacteria 3283
42 Ga0068859_100282491 3300005617 Unclassified 1753
43 Ga0068870_10050316 3300005840 Unclassified 2201
44 Ga0068863_100200696 3300005841 Unclassified 1919
45 Ga0068860_100129371 3300005843 Bacteria 2422
46 Ga0068860_100141224 3300005843 Bacteria 2315
47 Ga0097621_100008399 3300006237 Bacteria 7433
48 Ga0068871_100015439 3300006358 Bacteria 5715
49 Ga0068871_100175396 3300006358 Bacteria 1840
50 Ga0075428_100013009 3300006844 Bacteria 9251
51 Ga0075428_100033613 3300006844 Bacteria 5660
52 Ga0075428_100138676 3300006844 Unclassified 2644
53 Ga0075428_100251448 3300006844 Unclassified 1905
54 Ga0075430_100028668 3300006846 Bacteria 4728
55 Ga0075430_100074175 3300006846 Bacteria 2853
56 Ga0075430_100090584 3300006846 Unclassified 2558
57 Ga0075431_100033443 3300006847 Bacteria 5299
58 Ga0075431_100074083 3300006847 Unclassified 3513
59 Ga0075434_100236640 3300006871 Bacteria 1846
60 Ga0075434_100255346 3300006871 Bacteria 1772
61 Ga0068865_100017055 3300006881 Bacteria 4662
62 Ga0068865_100047002 3300006881 Unclassified 2964
63 Ga0068865_100423286 3300006881 Bacteria 1095
64 Ga0097620_100282491 3300006931 Unclassified 1753
65 Ga0111539_10000150 3300009094 Bacteria 79163
66 Ga0111539_10061579 3300009094 Bacteria 4445
67 Ga0111539_10198842 3300009094 Unclassified 2338
68 Ga0111539_10805260 3300009094 Bacteria 1093
69 Ga0105245_10525476 3300009098 Bacteria 1202
70 Ga0114129_10014579 3300009147 Bacteria 11198
71 Ga0114129_10037147 3300009147 Bacteria 6877
72 Ga0114129_10060763 3300009147 Bacteria 5283
73 Ga0114129_10077780 3300009147 Bacteria 4614
74 Ga0114129_10175869 3300009147 Bacteria 2916
75 Ga0105243_10081929 3300009148 Unclassified 2636
76 Ga0105243_10309164 3300009148 Bacteria 1435
77 Ga0105242_10194470 3300009176 Unclassified 1798
78 Ga0105242_10256860 3300009176 Unclassified 1577
79 Ga0105242_10651859 3300009176 Bacteria 1024
80 Ga0105248_10283217 3300009177 Bacteria 1866
81 Ga0105248_10605993 3300009177 Unclassified 1236
82 Ga0105248_10889865 3300009177 Bacteria 1005
83 Ga0157378_10578620 3300013297 Bacteria 1132
84 Ga0163162_10308320 3300013306 Bacteria 1715
85 Ga0157375_10365656 3300013308 Bacteria 1609
86 Ga0157375_10593054 3300013308 Bacteria 1268
87 Ga0163163_10000003 3300014325 Bacteria 455102
88 Ga0157380_10000381 3300014326 Bacteria 26800
89 Ga0157380_10279084 3300014326 Bacteria 1528
90 Ga0157377_10053428 3300014745 Bacteria 2284
91 Ga0157379_10233463 3300014968 Bacteria 1668
92 Ga0157376_10017941 3300014969 Bacteria 5413
93 Ga0207643_10016303 3300025908 Unclassified 4052
94 Ga0207643_10024027 3300025908 Bacteria 3363
95 Ga0207660_10410791 3300025917 Bacteria 1091
96 Ga0207662_10120207 3300025918 Bacteria 1647
97 Ga0207649_10123846 3300025920 Bacteria 1746
98 Ga0207650_10076539 3300025925 Bacteria 2528
99 Ga0207687_10007372 3300025927 Bacteria 7246
100 Ga0207644_10103909 3300025931 Bacteria 2138
101 Ga0207690_10143766 3300025932 Bacteria 1761
102 Ga0207706_10370144 3300025933 Unclassified 1244
103 Ga0207686_10303376 3300025934 Bacteria 1187
104 Ga0207686_10378625 3300025934 Bacteria 1073
105 Ga0207709_10028544 3300025935 Bacteria 3226
106 Ga0207709_10136365 3300025935 Unclassified 1681
107 Ga0207669_10036833 3300025937 Unclassified 2800
108 Ga0207669_10064827 3300025937 Bacteria 2263
109 Ga0207704_10010253 3300025938 Bacteria 4562
110 Ga0207704_10010403 3300025938 Unclassified 4537
111 Ga0207704_10219245 3300025938 Bacteria 1406
112 Ga0207691_10103255 3300025940 Bacteria 2542
113 Ga0207689_10093947 3300025942 Bacteria 2463
114 Ga0207661_10071832 3300025944 Bacteria 2830
115 Ga0207679_10066150 3300025945 Unclassified 2707
116 Ga0207679_10102570 3300025945 Bacteria 2240
117 Ga0207651_10024875 3300025960 Bacteria 3712
118 Ga0207712_10075453 3300025961 Bacteria 2437
119 Ga0207712_10194550 3300025961 Unclassified 1603
120 Ga0207641_10300001 3300026088 Bacteria 1517
121 Ga0207641_10353846 3300026088 Unclassified 1400
122 Ga0207648_10050740 3300026089 Unclassified 3627
123 Ga0207648_10170814 3300026089 Bacteria 1922
124 Ga0207648_10489978 3300026089 Bacteria 1124
125 Ga0207674_10128142 3300026116 Bacteria 2502
126 Ga0207675_100496210 3300026118 Bacteria 1215
127 Ga0207683_10012753 3300026121 Bacteria 7173
128 Ga0207683_10110438 3300026121 Unclassified 2462
129 Ga0207428_10001499 3300027907 Bacteria 24414
130 Ga0207428_10067137 3300027907 Bacteria 2824
131 Ga0207428_10448013 3300027907 Bacteria 941
132 Ga0268266_10328637 3300028379 Bacteria 1432
133 Ga0373934_0007074 3300035086 Bacteria 4164
134 Ga0373953_0014978 3300035117 Bacteria 2800
135 Ga0373933_0012311 3300035724 Bacteria 4724
136 Ga0373937_0002572 3300036401 Bacteria 15097
137 Ga0373925_0077068 3300037068 Bacteria 2530
138 Ga0439453_0009400 3300041408 Bacteria 1592
139 Ga0439446_0067459 3300042156 Unclassified 1090
140 Ga0439435_0047972 3300042436 Bacteria 1215
141 Ga0439460_0051246 3300042461 Bacteria 1238
142 Ga0451576_0049200 3300045051 Bacteria 4424
143 Ga0495653_0004208 3300046463 Bacteria 11654
144 Ga0495639_0100992 3300046475 Bacteria 1362
145 Ga0495642_0018654 3300046528 Unclassified 2716
146 Ga0495598_0060626 3300046537 Bacteria 1166
147 Ga0495621_0016446 3300046539 Bacteria 2375
148 Ga0495621_0056382 3300046539 Bacteria 1417
149 Ga0495621_0061655 3300046539 Bacteria 1363
150 Ga0495656_0003851 3300046615 Bacteria 5105
151 Ga0495613_0083816 3300046689 Unclassified 2315
152 Ga0495670_0127175 3300046691 Bacteria 1327
153 Ga0495636_0101594 3300047318 Unclassified 1258
154 Ga0495680_0310246 3300047322 Bacteria 1106
155 Ga0495684_0092768 3300047471 Unclassified 2287
156 Ga0495684_0099000 3300047471 Unclassified 2205
157 Ga0496100_0017435 3300048903 Bacteria 4239
158 Ga0496101_0000472 3300048904 Bacteria 25384
159 Ga0496102_0091159 3300048905 Bacteria 2821
160 Ga0496104_0042192 3300048907 Bacteria 4280
161 Ga0496108_0142657 3300048911 Bacteria 2064
162 Ga0496109_0302525 3300048912 Bacteria 1508
163 Ga0496110_0231143 3300048913 Unclassified 1682
164 Ga0496113_0062925 3300048916 Bacteria 2803
165 Ga0496114_0000401 3300048917 Bacteria 32064
166 Ga0496115_0252084 3300048918 Bacteria 1453
167 Ga0501032_0093593 3300049569 Bacteria 1993
168 Ga0501033_0023505 3300049570 Bacteria 4648
169 Ga0501034_0054887 3300049571 Bacteria 4010
170 Ga0501039_0029699 3300049575 Unclassified 4211
171 Ga0501039_0188221 3300049575 Bacteria 1623
172 Ga0501040_0018440 3300049576 Bacteria 4633
173 Ga0501040_0035836 3300049576 Bacteria 3366
174 Ga0501041_0008080 3300049577 Bacteria 6192
175 Ga0501041_0017610 3300049577 Bacteria 4251
176 Ga0501042_0001141 3300049578 Bacteria 15333
177 Ga0501042_0006334 3300049578 Bacteria 7679
178 Ga0501046_0009057 3300049580 Bacteria 8630
179 Ga0501046_0058647 3300049580 Bacteria 3017
180 Ga0501047_0019887 3300049581 Bacteria 6445
181 Ga0501048_0028620 3300049582 Bacteria 4045
182 Ga0501048_0097810 3300049582 Bacteria 2071
183 Ga0501068_0022904 3300049584 Bacteria 3657
184 Ga0501071_0002684 3300049587 Bacteria 10895
185 Ga0501071_0143677 3300049587 Bacteria 1778
186 Ga0501072_0290778 3300049588 Bacteria 1299
187 Ga0501075_0015879 3300049591 Bacteria 5414
188 Ga0501075_0016942 3300049591 Bacteria 5255
189 Ga0501076_0019408 3300049592 Bacteria 5197
190 Ga0501077_0016483 3300049593 Bacteria 4656
191 Ga0501077_0028078 3300049593 Bacteria 3576
192 Ga0501079_0006421 3300049741 Bacteria 8828
193 Ga0501079_0180975 3300049741 Bacteria 1645
194 Ga0501080_0032968 3300049742 Bacteria 4833
195 Ga0501080_0808304 3300049742 Bacteria 822
196 Ga0501081_0002159 3300049743 Bacteria 12335
197 Ga0501083_0110690 3300049744 Bacteria 1806
198 Ga0501044_0314564 3300049823 Bacteria 1492
199 Ga0501045_0035859 3300049824 Bacteria 3602
200 nmdc:mga05p37_108318_c1 3300050507 Bacteria 3418
201 nmdc:mga05p37_14825_c1 3300050507 Bacteria 9359
202 nmdc:mga05p37_171821_c1 3300050507 Bacteria 2643
203 nmdc:mga05p37_253984_c1 3300050507 Unclassified 2107
204 nmdc:mga05p37_332518_c1 3300050507 Unclassified 1794
205 nmdc:mga05p37_67688_c1 3300050507 Bacteria 4393
206 nmdc:mga05p37_955_c1 3300050507 Bacteria 32691
207 nmdc:mga09592_415841_c1 3300050508 Unclassified 1162
208 nmdc:mga09592_75170_c1 3300050508 Bacteria 2872
209 nmdc:mga0qj67_32847_c1 3300050509 Bacteria 4048
210 nmdc:mga0qj67_51441_c1 3300050509 Bacteria 3258
211 nmdc:mga06r32_13279_c1 3300050510 Bacteria 7458
212 nmdc:mga06r32_30316_c1 3300050510 Bacteria 5075
213 nmdc:mga06r32_507569_c1 3300050510 Unclassified 1182
214 nmdc:mga08y16_108918_c1 3300050511 Bacteria 2884
215 nmdc:mga08y16_126452_c1 3300050511 Bacteria 2659
216 nmdc:mga08y16_18916_c1 3300050511 Bacteria 7253
217 nmdc:mga08y16_235_c1 3300050511 Bacteria 48485
218 nmdc:mga08y16_297416_c1 3300050511 Unclassified 1664
219 nmdc:mga0n895_224217_c1 3300050512 Bacteria 1908
220 nmdc:mga08x19_123110_c1 3300050514 Bacteria 1740
221 nmdc:mga0a205_373512_c1 3300050515 Bacteria 1292
222 Ga0495595_0065265 3300053084 Bacteria 1712
223 Ga0501084_0017620 3300054114 Bacteria 5943
224 Ga0501084_0025066 3300054114 Bacteria 4976
225 Ga0501082_0006454 3300060353 Bacteria 10172
226 Ga0501082_0346566 3300060353 Bacteria 1295
227 Ga0439435_0012061
228 Ga0065712_10068473
229 Ga0065712_10118296
230 Ga0070676_10019060
231 Ga0070683_100016981
232 Ga0070683_100784618
233 Ga0070690_100032905
234 Ga0070670_100015373
235 Ga0070666_10131111
236 Ga0070689_100207037
237 Ga0070689_100310554
238 Ga0070687_100158302
239 Ga0070692_10089440
240 Ga0070669_100161019
241 Ga0070669_100442135
242 Ga0070675_100004986
243 Ga0070671_100069974
244 Ga0070674_100073642
245 Ga0070673_100050998
246 Ga0070701_10016368
247 Ga0070705_100002193
248 Ga0070694_100001751
249 Ga0070694_100127493
250 Ga0070678_100068025
251 Ga0068867_100144122
252 Ga0070685_10018821
253 Ga0070698_100173086
254 Ga0070699_100000457
255 Ga0070679_100263921
256 Ga0070697_100312971
257 Ga0070672_100065871
258 Ga0070686_100071258
259 Ga0070695_100000230
260 Ga0070695_100095137
261 Ga0070696_100000912
262 Ga0070665_100006579
263 Ga0070704_100080169
264 Ga0070704_100102407
265 Ga0070664_100097387
266 Ga0070702_100003892
267 Ga0070702_100023384
268 Ga0068859_100282491
269 Ga0068870_10050316
270 Ga0068863_100200696
271 Ga0068860_100129371
272 Ga0068860_100141224
273 Ga0097621_100008399
274 Ga0068871_100015439
275 Ga0068871_100175396
276 Ga0075428_100013009
277 Ga0075428_100033613
278 Ga0075428_100138676
279 Ga0075428_100251448
280 Ga0075430_100028668
281 Ga0075430_100074175
282 Ga0075430_100090584
283 Ga0075431_100033443
284 Ga0075431_100074083
285 Ga0075434_100236640
286 Ga0075434_100255346
287 Ga0068865_100017055
288 Ga0068865_100047002
289 Ga0068865_100423286
290 Ga0097620_100282491
291 Ga0111539_10000150
292 Ga0111539_10061579
293 Ga0111539_10198842
294 Ga0111539_10805260
295 Ga0105245_10525476
296 Ga0114129_10014579
297 Ga0114129_10037147
298 Ga0114129_10060763
299 Ga0114129_10077780
300 Ga0114129_10175869
301 Ga0105243_10081929
302 Ga0105243_10309164
303 Ga0105242_10194470
304 Ga0105242_10256860
305 Ga0105242_10651859
306 Ga0105248_10283217
307 Ga0105248_10605993
308 Ga0105248_10889865
309 Ga0157378_10578620
310 Ga0163162_10308320
311 Ga0157375_10365656
312 Ga0157375_10593054
313 Ga0163163_10000003
314 Ga0157380_10000381
315 Ga0157380_10279084
316 Ga0157377_10053428
317 Ga0157379_10233463
318 Ga0157376_10017941
319 Ga0207643_10016303
320 Ga0207643_10024027
321 Ga0207660_10410791
322 Ga0207662_10120207
323 Ga0207649_10123846
324 Ga0207650_10076539
325 Ga0207687_10007372
326 Ga0207644_10103909
327 Ga0207690_10143766
328 Ga0207706_10370144
329 Ga0207686_10303376
330 Ga0207686_10378625
331 Ga0207709_10028544
332 Ga0207709_10136365
333 Ga0207669_10036833
334 Ga0207669_10064827
335 Ga0207704_10010253
336 Ga0207704_10010403
337 Ga0207704_10219245
338 Ga0207691_10103255
339 Ga0207689_10093947
340 Ga0207661_10071832
341 Ga0207679_10066150
342 Ga0207679_10102570
343 Ga0207651_10024875
344 Ga0207712_10075453
345 Ga0207712_10194550
346 Ga0207641_10300001
347 Ga0207641_10353846
348 Ga0207648_10050740
349 Ga0207648_10170814
350 Ga0207648_10489978
351 Ga0207674_10128142
352 Ga0207675_100496210
353 Ga0207683_10012753
354 Ga0207683_10110438
355 Ga0207428_10001499
356 Ga0207428_10067137
357 Ga0207428_10448013
358 Ga0268266_10328637
359 Ga0373934_0007074
360 Ga0373953_0014978
361 Ga0373933_0012311
362 Ga0373937_0002572
363 Ga0373925_0077068
364 Ga0439453_0009400
365 Ga0439446_0067459
366 Ga0439435_0047972
367 Ga0439460_0051246
368 Ga0451576_0049200
369 Ga0495653_0004208
370 Ga0495639_0100992
371 Ga0495642_0018654
372 Ga0495598_0060626
373 Ga0495621_0016446
374 Ga0495621_0056382
375 Ga0495621_0061655
376 Ga0495656_0003851
377 Ga0495613_0083816
378 Ga0495670_0127175
379 Ga0495636_0101594
380 Ga0495680_0310246
381 Ga0495684_0092768
382 Ga0495684_0099000
383 Ga0496100_0017435
384 Ga0496101_0000472
385 Ga0496102_0091159
386 Ga0496104_0042192
387 Ga0496108_0142657
388 Ga0496109_0302525
389 Ga0496110_0231143
390 Ga0496113_0062925
391 Ga0496114_0000401
392 Ga0496115_0252084
393 Ga0501032_0093593
394 Ga0501033_0023505
395 Ga0501034_0054887
396 Ga0501039_0029699
397 Ga0501039_0188221
398 Ga0501040_0018440
399 Ga0501040_0035836
400 Ga0501041_0008080
401 Ga0501041_0017610
402 Ga0501042_0001141
403 Ga0501042_0006334
404 Ga0501046_0009057
405 Ga0501046_0058647
406 Ga0501047_0019887
407 Ga0501048_0028620
408 Ga0501048_0097810
409 Ga0501068_0022904
410 Ga0501071_0002684
411 Ga0501071_0143677
412 Ga0501072_0290778
413 Ga0501075_0015879
414 Ga0501075_0016942
415 Ga0501076_0019408
416 Ga0501077_0016483
417 Ga0501077_0028078
418 Ga0501079_0006421
419 Ga0501079_0180975
420 Ga0501080_0032968
421 Ga0501080_0808304
422 Ga0501081_0002159
423 Ga0501083_0110690
424 Ga0501044_0314564
425 Ga0501045_0035859
426 nmdc:mga05p37_108318_c1
427 nmdc:mga05p37_14825_c1
428 nmdc:mga05p37_171821_c1
429 nmdc:mga05p37_253984_c1
430 nmdc:mga05p37_332518_c1
431 nmdc:mga05p37_67688_c1
432 nmdc:mga05p37_955_c1
433 nmdc:mga09592_415841_c1
434 nmdc:mga09592_75170_c1
435 nmdc:mga0qj67_32847_c1
436 nmdc:mga0qj67_51441_c1
437 nmdc:mga06r32_13279_c1
438 nmdc:mga06r32_30316_c1
439 nmdc:mga06r32_507569_c1
440 nmdc:mga08y16_108918_c1
441 nmdc:mga08y16_126452_c1
442 nmdc:mga08y16_18916_c1
443 nmdc:mga08y16_235_c1
444 nmdc:mga08y16_297416_c1
445 nmdc:mga0n895_224217_c1
446 nmdc:mga08x19_123110_c1
447 nmdc:mga0a205_373512_c1
448 Ga0495595_0065265
449 Ga0501084_0017620
450 Ga0501084_0025066
451 Ga0501082_0006454
452 Ga0501082_0346566

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04545

Sigma70_r4

Sigma-70, region 4

215

264

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bhy-assembly1.cif.gz_A dna-binding domain of deor in complex with the dna operator 0.9561 205 243
7bhy-assembly1.cif.gz_B dna-binding domain of deor in complex with the dna operator 0.9495 205 243
7bhy-assembly2.cif.gz_C-2 dna-binding domain of deor in complex with the dna operator 0.9468 205 243
3vfz-assembly3.cif.gz_A crystal structure of -35 promoter binding domain of sigd of mycobacterium tuberculosis 0.9381 197 249
2o8x-assembly1.cif.gz_A "crystal structure of the ""-35 element"" promoter recognition domain of mycobacterium tuberculosis sigc" 0.9378 195 245
ID Description Score Start End Superfamily
3vepE00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9604 197 249 1.10.10.10
3vepH00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9601 197 249 1.10.10.10
3vfzA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9381 197 249 1.10.10.10
2o8xA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9378 195 245 1.10.10.10
4go1B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.937 205 243 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7W1P9E9-F1-model_v4 RNA polymerase sigma-70 region 2 domain-containing protein 0.9674 13 164
AF-A0A2V8EJL5-F1-model_v4 RNA polymerase sigma-70 region 4 domain-containing protein 0.9323 63 284 GO:0006352
GO:0016987
AF-A0A2V8DXL6-F1-model_v4 Uncharacterized protein 0.9231 9 108
AF-A0A2V8EJL5-F1-model_v4 RNA polymerase sigma-70 region 4 domain-containing protein 0.9046 63 284 GO:0006352
GO:0016987
AF-A0A2V8DXL6-F1-model_v4 Uncharacterized protein 0.8733 9 108

Map