F338916

General Info

Members Datasets Scaffolds Average Seq Length
226 192 452 584

Family's Representative Sequence

Representative Sequence 3300025284|Ga0209130_1002160|Ga0209130_10021603
Length 616
Sequence MGEPASFKKKEAAYENIKEEIFMEKTVGSAVKGGSFLVDEITIDQVFTPEDFSSEHKMIAKTTEDFIVNEVLPELEYLEQHEFDRSVRLLKEAGELGLLGADVPEEYGGIGLDKVSSALIAEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFVVYAKIDGEHFSAFIVEKEYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNILNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEELMMMMPEEVGDEPLALQKYLVTNAKKIGLMVAGLAAQKYGKALDKEQEILVNIADIVSNLYAMESTVLRTEKAIKTTGLEKNKQKVLYTEVFCQEAFNEIEADAKETLIAVENGDMLRMMLSSLRKLTRHTPLNVIPKKREIAAKILEDERYTV

Samples

Sample ID Description Type Environment
1 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
2 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
6 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
7 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
11 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
12 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
13 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
14 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
15 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
16 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
17 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
18 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
19 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
20 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
21 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
22 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
23 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
24 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
25 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
28 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
29 3300030083 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JPPOOL-T1 Metagenome Unclassified
30 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
31 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
32 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
33 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
34 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
35 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
36 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
37 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
38 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
39 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
40 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
41 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
42 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
43 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
44 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
45 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
46 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
47 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
48 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
49 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
50 3300049552 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
51 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
52 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
53 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
54 2511231119 Bacillus velezensis CAU B946 Isolate Rhizosphere
55 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
56 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
57 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
58 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
59 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
60 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
61 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
62 2630968484 Bacillus methylotrophicus KACC 13105 Isolate Rhizosphere
63 2643221729 Bacillus sp. Root11 Isolate Unclassified
64 2643221730 Bacillus sp. Root131 Isolate Unclassified
65 2643221731 Bacillus sp. Root147 Isolate Unclassified
66 2643221732 Bacillus sp. Root239 Isolate Unclassified
67 2643221735 Bacillus sp. Root920 Isolate Unclassified
68 2648501850 Bacillus amyloliquefaciens RHNK22 Isolate Rhizosphere
69 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
70 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
71 2684622632 Bacillus cereus 905 Isolate Unclassified
72 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
73 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
74 2695420354 Bacillus sp. Co1-6 Isolate Unclassified
75 2695420987 Bacillus thuringiensis KNU-07 Isolate Unclassified
76 2703719227 Bacillus mycoides GOE6 Isolate Rhizosphere
77 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
78 2718218445 Bacillus sp. B25(2016b) Isolate Rhizosphere
79 2738541295 Bacillus sp. OK085 Isolate Unclassified
80 2738541299 Paenisporosarcina sp. OV554 Isolate Unclassified
81 2738541358 Bacillus sp. OV752 Isolate Unclassified
82 2738543006 Bacillus sp. OK077 Isolate Unclassified
83 2738543010 Bacillus sp. YR335 Isolate Unclassified
84 2738543017 Bacillus sp. OV186 Isolate Unclassified
85 2744054657 Brevibacillus sp. SKDU10 Isolate Unclassified
86 2757320391 Bacillus sp. NFR08 Isolate Rhizoplane
87 2775507177 Bacillus sp. AFS055030 Isolate Unclassified
88 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
89 2788500588 Lysinibacillus sp. YS11 Isolate Unclassified
90 2808606364 Bacillus sp. SLBN-3 Isolate Unclassified
91 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
92 2811994870 Bacillus sp. JB4 Isolate Unclassified
93 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
94 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
95 2816332336 Brevibacillus laterosporus ZQ2 Isolate Unclassified
96 2818991441 Niallia circulans 3243 Isolate Rhizosphere
97 2818991443 Bacillus thuringiensis 1230 Isolate Unclassified
98 2818991451 Lysinibacillus fusiformis 3193 Isolate Unclassified
99 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
100 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
101 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
102 2842682962 Bacillus sp. R-72492 Isolate Unclassified
103 2842882022 Bacillus sp. R-71893 Isolate Unclassified
104 2849139964 Bacillus sp. R-71875 Isolate Unclassified
105 2852673933 Sporosarcina sp. JAI121 Isolate Rhizosphere
106 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
107 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
108 2857581216 Bacillus sp. R-71922 Isolate Unclassified
109 2857586860 Bacillus sp. R-71935 Isolate Unclassified
110 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
111 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
112 2857609550 Domibacillus sp. R-71929 Isolate Unclassified
113 2860837431 Bacillus sp. WR11 Isolate Unclassified
114 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
115 2877768649 Bacillus amyloliquefaciens Y14 Isolate Rhizosphere
116 2880169592 Bacillus velezensis T20E-257 Isolate Unclassified
117 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
118 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
119 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
120 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
121 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
122 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
123 2904606771 Lysinibacillus macroides 1284 Isolate Rhizosphere
124 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
125 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
126 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
127 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
128 2916971899 Alkalihalobacillus miscanthi AK13 Isolate Rhizosphere
129 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
130 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
131 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
132 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
133 2919720352 Priestia megaterium 4340 Isolate Unclassified
134 2919726948 Bacillus pumilus 4489 Isolate Unclassified
135 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
136 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
137 2929004312 Priestia megaterium 1104 Isolate Unclassified
138 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
139 2929233124 Bacillus sp. R-74298 Hybrid assembly Isolate Unclassified
140 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
141 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
142 2938917290 Bacillus sp. CR71 Isolate Unclassified
143 2939593269 Lysinibacillus parviboronicapiens 736 Isolate Rhizosphere
144 2947426588 Bacillus sp. RZ2MS9 Isolate Rhizosphere
145 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
146 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
147 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
148 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
149 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
150 2964375228 Anaerobacillus alkaliphilus B16-10 Isolate Rhizosphere
151 2965761152 Bacillus sp. COPE52 Isolate Unclassified
152 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
153 2969141011 Bacillus velezensis MH25 Isolate Unclassified
154 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
155 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
156 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
157 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
158 2979083700 Bacillus toyonensis SORGH_AS 407 Isolate Unclassified
159 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
160 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
161 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
162 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
163 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
164 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
165 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
166 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
167 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
168 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified
169 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
170 3006879489 Bacillus atrophaeus UCMB-5137 Isolate Rhizosphere
171 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
172 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
173 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
174 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
175 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
176 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
177 8022621104 Bacillus sp. PIC28 Isolate Rhizosphere
178 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
179 8022653035 Bacillus sp. Rc4 Isolate Unclassified
180 8022792930 Bacillus sp. Xin Isolate Rhizosphere
181 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
182 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
183 8022948649 Bacillus endophyticus FH5 Isolate Rhizosphere
184 8023438354 Bacillus sp. BH2 Isolate Unclassified
185 8023444577 Bacillus sp. BH32 Isolate Unclassified
186 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
187 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
188 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
189 8055531788 Lysinibacillus pakistanensis LY1 Isolate Rhizosphere
190 8057582654 Bacillus arachidis YX15 Isolate Rhizosphere
191 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere
192 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 34.07
Metatranscriptomes 3.54
Isolates 62.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.37
Nodule 0.44
Rhizoplane 5.31
Rhizosphere 42.48
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0209130_1002160 3300025284 Bacteria 10375
2 JGI25159J45721_1010524 3300002987 Bacteria 2348
3 JGI25151J46595_10000011 3300003187 Bacteria 264206
4 JGI25151J46595_10000882 3300003187 Bacteria 23646
5 JGI25151J46595_10003610 3300003187 Bacteria 8462
6 JGI25151J46595_10005227 3300003187 Bacteria 6727
7 JGI25151J46595_10012246 3300003187 Bacteria 3907
8 JGI25151J46595_10025514 3300003187 Bacteria 2404
9 JGI25151J46595_10026552 3300003187 Bacteria 2335
10 Ga0006562J51391_1000331 3300003578 Bacteria 23220
11 Ga0006562J51391_1000948 3300003578 Bacteria 18850
12 Ga0006562J51391_1001826 3300003578 Bacteria 5672
13 Ga0006562J51391_1005576 3300003578 Bacteria 5611
14 Ga0055538_1000460 3300003751 Bacteria 15300
15 Ga0055532_1000052 3300003758 Bacteria 164911
16 Ga0055532_1000815 3300003758 Bacteria 10701
17 Ga0055536_1002904 3300003781 Bacteria 9414
18 Ga0055536_1018019 3300003781 Bacteria 2280
19 Ga0070671_100043271 3300005355 Bacteria 3742
20 Ga0070659_100093169 3300005366 Bacteria 2417
21 Ga0081540_1004463 3300005983 Bacteria 10654
22 Ga0075428_100068598 3300006844 Bacteria 3879
23 Ga0114129_10224669 3300009147 Bacteria 2531
24 Ga0105243_10001144 3300009148 Bacteria 24064
25 Ga0105242_10003196 3300009176 Bacteria 12760
26 Ga0105239_10114704 3300010375 Bacteria 2988
27 Ga0157378_10004354 3300013297 Bacteria 12455
28 Ga0157377_10004849 3300014745 Bacteria 6253
29 Ga0209784_100061 3300025224 Bacteria 164590
30 Ga0209566_100340 3300025225 Bacteria 40831
31 Ga0209147_100028 3300025229 Bacteria 383994
32 Ga0209147_100098 3300025229 Bacteria 163978
33 Ga0209147_100752 3300025229 Bacteria 15973
34 Ga0209147_103227 3300025229 Bacteria 3314
35 Ga0209673_1001821 3300025273 Bacteria 17473
36 Ga0209130_1008656 3300025284 Bacteria 2981
37 Ga0209130_1011060 3300025284 Bacteria 2436
38 Ga0209676_1001289 3300025292 Bacteria 25821
39 Ga0209676_1003082 3300025292 Bacteria 10740
40 Ga0209676_1009794 3300025292 Bacteria 4082
41 Ga0209025_1000011 3300025294 Bacteria 976387
42 Ga0209025_1000095 3300025294 Bacteria 240057
43 Ga0209025_1002836 3300025294 Bacteria 17410
44 Ga0209025_1002948 3300025294 Bacteria 16919
45 Ga0209025_1003096 3300025294 Bacteria 16302
46 Ga0209025_1003381 3300025294 Bacteria 15229
47 Ga0209025_1006202 3300025294 Bacteria 9384
48 Ga0209025_1011454 3300025294 Bacteria 5837
49 Ga0209025_1012598 3300025294 Bacteria 5406
50 Ga0209025_1017528 3300025294 Bacteria 4124
51 Ga0207426_1008949 3300025302 Bacteria 3993
52 Ga0207655_1002090 3300025728 Bacteria 16739
53 Ga0207713_1000472 3300025735 Bacteria 41917
54 Ga0207713_1012064 3300025735 Bacteria 4649
55 Ga0209371_1004321 3300027312 Bacteria 6273
56 Ga0265338_10071140 3300028800 Bacteria 2978
57 Ga0237817_10456 3300030083 Bacteria 6105
58 Ga0237817_10508 3300030083 Bacteria 5138
59 Ga0268256_1003405 3300030500 Bacteria 7179
60 Ga0316583_10004849 3300032133 Bacteria 4804
61 Ga0316583_10006130 3300032133 Bacteria 4326
62 Ga0237819_00688 3300038705 Bacteria 10976
63 Ga0237819_01776 3300038705 Bacteria 5048
64 Ga0466967_0000493 3300045976 Bacteria 19236
65 Ga0495607_0098252 3300046501 Bacteria 1573
66 Ga0495683_0008087 3300047323 Bacteria 5645
67 Ga0496102_0006407 3300048905 Bacteria 10036
68 Ga0496104_0006410 3300048907 Bacteria 10350
69 Ga0496106_0003137 3300048909 Bacteria 12334
70 Ga0496108_0000439 3300048911 Bacteria 33419
71 Ga0496109_0009055 3300048912 Bacteria 8478
72 Ga0496110_0001507 3300048913 Bacteria 16908
73 Ga0496110_0002562 3300048913 Bacteria 13666
74 Ga0496111_0001360 3300048914 Bacteria 13842
75 Ga0496111_0002013 3300048914 Bacteria 12084
76 Ga0496112_0006733 3300048915 Bacteria 10121
77 Ga0496113_0015976 3300048916 Bacteria 5176
78 Ga0496116_0022573 3300048919 Bacteria 4713
79 Ga0496117_0029860 3300048920 Bacteria 4195
80 Ga0501306_000006 3300049127 Bacteria 9500
81 Ga0501305_000950 3300049161 Bacteria 2651
82 Ga0501312_003121 3300049528 Bacteria 1853
83 Ga0501336_000346 3300049552 Bacteria 2204
84 nmdc:mga06r32_141657_c1 3300050510 Bacteria 2381
85 nmdc:mga08y16_45834_c1 3300050511 Bacteria 4580
86 2511181126 2510917027 Bacteria 5287437
87 2511700991 2511231119 Bacteria 4019861
88 2512639927 2512564013 Bacteria 6286191
89 2512735135 2512564039 Bacteria 8739048
90 2540608191 2540341094 Bacteria 4061186
91 2545559455 2545555800 Bacteria 4222588
92 2578930410 2576861599 Bacteria 4217202
93 2595090629 2593339131 Bacteria 5116855
94 2595316189 2593339198 Bacteria 7267884
95 2631986234 2630968484 Bacteria 3876276
96 2644703251 2643221729 Bacteria 6621700
97 2644711974 2643221730 Bacteria 6523787
98 2644720287 2643221731 Bacteria 5623886
99 2644726631 2643221732 Bacteria 5756404
100 2644738988 2643221735 Bacteria 3676263
101 2651530609 2648501850 Bacteria 3975476
102 2672338439 2671180330 Bacteria 5521719
103 2674422072 2671180844 Bacteria 4164150
104 2685152977 2684622632 Bacteria 5380049
105 2686998351 2684623153 Bacteria 3878815
106 2687499627 2687453109 Bacteria 3860091
107 2695628947 2695420354 Bacteria 3922431
108 2698320205 2695420987 Bacteria 6152737
109 2705996907 2703719227 Bacteria 5631989
110 2717915358 2716884898 Bacteria 3928789
111 2721508124 2718218445 Bacteria 5113413
112 2738815304 2738541295 Bacteria 5730091
113 2738838058 2738541299 Bacteria 4020721
114 2739157248 2738541358 Bacteria 5932299
115 2739209002 2738543006 Bacteria 5904091
116 2739233126 2738543010 Bacteria 5583595
117 2739269835 2738543017 Bacteria 4271950
118 2745167413 2744054657 Bacteria 5016802
119 2757568776 2757320391 Bacteria 4746095
120 2777761867 2775507177 Bacteria 4384303
121 2777838324 2775507192 Bacteria 4622234
122 2791215086 2788500588 Bacteria 4584915
123 2808870022 2808606364 Bacteria 4465927
124 2809053322 2808606399 Bacteria 4021018
125 2812317478 2811994870 Bacteria 3776934
126 2816865633 2816332186 Bacteria 5331395
127 2817481576 2816332295 Bacteria 4352468
128 2817620572 2816332336 Bacteria 5207640
129 2819570633 2818991441 Bacteria 5062707
130 2819584250 2818991443 Bacteria 6598732
131 2819629347 2818991451 Bacteria 4697364
132 2819711216 2818991465 Bacteria 5388835
133 2819722534 2818991468 Bacteria 3723169
134 2823529447 2823526263 Bacteria 3765752
135 2842686404 2842682962 Bacteria 5589973
136 2842886226 2842882022 Bacteria 6158489
137 2849143277 2849139964 Bacteria 5613304
138 2852677031 2852673933 Bacteria 3347676
139 2857462901 2857460504 Bacteria 5194327
140 2857467817 2857465823 Bacteria 6772595
141 2857583431 2857581216 Bacteria 5522813
142 2857589563 2857586860 Bacteria 4354574
143 2857594656 2857591370 Bacteria 6569758
144 2857604787 2857604169 Bacteria 5111450
145 2857609663 2857609550 Bacteria 3753890
146 2860840983 2860837431 Bacteria 4202080
147 2864999613 2864997549 Bacteria 5139696
148 2877771878 2877768649 Bacteria 3957164
149 2880172717 2880169592 Bacteria 3900066
150 2881645552 2881644220 Bacteria 5302661
151 2881647962 2881644220 Bacteria 5302661
152 2889299956 2889295896 Bacteria 4704906
153 2897112993 2897109615 Bacteria 4009619
154 2898910523 2898907183 Bacteria 4067722
155 2904528640 2904524088 Bacteria 5887454
156 2904561311 2904560550 Bacteria 4029838
157 2904610255 2904606771 Bacteria 4684500
158 2907202662 2907202186 Bacteria 6632024
159 2908666819 2908665501 Bacteria 3678115
160 2915597317 2915597211 Bacteria 6475886
161 2915611474 2915606848 Bacteria 6032732
162 2916975241 2916971899 Bacteria 4250608
163 2919095166 2919093281 Bacteria 3660974
164 2919148271 2919143609 Bacteria 6219228
165 2919416259 2919414237 Bacteria 5429133
166 2919521962 2919517244 Bacteria 5858162
167 2919725098 2919720352 Bacteria 5986006
168 2919727731 2919726948 Bacteria 3696050
169 2928098389 2928093941 Bacteria 5965005
170 2928515130 2928510474 Bacteria 4815308
171 2929007819 2929004312 Bacteria 5678476
172 2929188770 2929183550 Bacteria 6377511
173 2929238693 2929233124 Bacteria 5948380
174 2936344901 2936340661 Bacteria 5139038
175 2936362467 2936361878 Bacteria 5632809
176 2938922895 2938917290 Bacteria 5914775
177 2939595901 2939593269 Bacteria 4798695
178 2947431771 2947426588 Bacteria 5357194
179 2954777015 2954773129 Bacteria 3741715
180 2956899708 2956897341 Bacteria 5447711
181 2960321204 2960319331 Bacteria 5502575
182 2960378475 2960375949 Bacteria 5361395
183 2962294219 2962290636 Bacteria 4072939
184 2964376396 2964375228 Bacteria 4909004
185 2965766302 2965761152 Bacteria 5806513
186 2969140193 2969136845 Bacteria 3923176
187 2969144429 2969141011 Bacteria 4118468
188 2969769042 2969765954 Bacteria 4216713
189 2969771363 2969770375 Bacteria 4271280
190 2971896547 2971893375 Bacteria 3929648
191 2977255985 2977254563 Bacteria 4828420
192 2979088684 2979083700 Bacteria 5894929
193 2980495979 2980492589 Bacteria 4072961
194 2981286955 2981284811 Bacteria 4641497
195 2981291905 2981289755 Bacteria 4641509
196 2981982592 2981980479 Bacteria 4641628
197 2981987622 2981985349 Bacteria 4641497
198 2990276811 2990275345 Bacteria 4887158
199 3001269024 3001267043 Bacteria 4823521
200 3001274465 3001272096 Bacteria 4729684
201 3001895272 3001892409 Bacteria 6328293
202 3006828739 3006826541 Bacteria 4678913
203 3006862004 3006858327 Bacteria 4317835
204 3006882717 3006879489 Bacteria 4064221
205 3006971569 3006969106 Bacteria 4739423
206 3006976486 3006973921 Bacteria 4423788
207 3006981136 3006978542 Bacteria 5328100
208 3006987047 3006984091 Bacteria 4207523
209 3006992981 3006988479 Bacteria 4767936
210 8002320235 8002317523 Bacteria 8051857
211 8022626478 8022621104 Bacteria 5241040
212 8022633143 8022630665 Bacteria 3886130
213 8022657007 8022653035 Bacteria 4035078
214 8022796431 8022792930 Bacteria 5693794
215 8022894254 8022893055 Bacteria 5300455
216 8022918635 8022914991 Bacteria 5584517
217 8022953266 8022948649 Bacteria 5366783
218 8023441127 8023438354 Bacteria 5779374
219 8023448672 8023444577 Bacteria 5661597
220 8051954507 8051952484 Bacteria 3926774
221 8052175408 8052174270 Bacteria 3881265
222 8054282561 8054280661 Bacteria 4232245
223 8055536204 8055531788 Bacteria 5249694
224 8057587443 8057582654 Bacteria 5218944
225 8057636144 8057632132 Bacteria 4726859
226 8057977358 8057977335 Bacteria 5694872
227 Ga0209130_1002160
228 JGI25159J45721_1010524
229 JGI25151J46595_10000011
230 JGI25151J46595_10000882
231 JGI25151J46595_10003610
232 JGI25151J46595_10005227
233 JGI25151J46595_10012246
234 JGI25151J46595_10025514
235 JGI25151J46595_10026552
236 Ga0006562J51391_1000331
237 Ga0006562J51391_1000948
238 Ga0006562J51391_1001826
239 Ga0006562J51391_1005576
240 Ga0055538_1000460
241 Ga0055532_1000052
242 Ga0055532_1000815
243 Ga0055536_1002904
244 Ga0055536_1018019
245 Ga0070671_100043271
246 Ga0070659_100093169
247 Ga0081540_1004463
248 Ga0075428_100068598
249 Ga0114129_10224669
250 Ga0105243_10001144
251 Ga0105242_10003196
252 Ga0105239_10114704
253 Ga0157378_10004354
254 Ga0157377_10004849
255 Ga0209784_100061
256 Ga0209566_100340
257 Ga0209147_100028
258 Ga0209147_100098
259 Ga0209147_100752
260 Ga0209147_103227
261 Ga0209673_1001821
262 Ga0209130_1008656
263 Ga0209130_1011060
264 Ga0209676_1001289
265 Ga0209676_1003082
266 Ga0209676_1009794
267 Ga0209025_1000011
268 Ga0209025_1000095
269 Ga0209025_1002836
270 Ga0209025_1002948
271 Ga0209025_1003096
272 Ga0209025_1003381
273 Ga0209025_1006202
274 Ga0209025_1011454
275 Ga0209025_1012598
276 Ga0209025_1017528
277 Ga0207426_1008949
278 Ga0207655_1002090
279 Ga0207713_1000472
280 Ga0207713_1012064
281 Ga0209371_1004321
282 Ga0265338_10071140
283 Ga0237817_10456
284 Ga0237817_10508
285 Ga0268256_1003405
286 Ga0316583_10004849
287 Ga0316583_10006130
288 Ga0237819_00688
289 Ga0237819_01776
290 Ga0466967_0000493
291 Ga0495607_0098252
292 Ga0495683_0008087
293 Ga0496102_0006407
294 Ga0496104_0006410
295 Ga0496106_0003137
296 Ga0496108_0000439
297 Ga0496109_0009055
298 Ga0496110_0001507
299 Ga0496110_0002562
300 Ga0496111_0001360
301 Ga0496111_0002013
302 Ga0496112_0006733
303 Ga0496113_0015976
304 Ga0496116_0022573
305 Ga0496117_0029860
306 Ga0501306_000006
307 Ga0501305_000950
308 Ga0501312_003121
309 Ga0501336_000346
310 nmdc:mga06r32_141657_c1
311 nmdc:mga08y16_45834_c1
312 2511181126
313 2511700991
314 2512639927
315 2512735135
316 2540608191
317 2545559455
318 2578930410
319 2595090629
320 2595316189
321 2631986234
322 2644703251
323 2644711974
324 2644720287
325 2644726631
326 2644738988
327 2651530609
328 2672338439
329 2674422072
330 2685152977
331 2686998351
332 2687499627
333 2695628947
334 2698320205
335 2705996907
336 2717915358
337 2721508124
338 2738815304
339 2738838058
340 2739157248
341 2739209002
342 2739233126
343 2739269835
344 2745167413
345 2757568776
346 2777761867
347 2777838324
348 2791215086
349 2808870022
350 2809053322
351 2812317478
352 2816865633
353 2817481576
354 2817620572
355 2819570633
356 2819584250
357 2819629347
358 2819711216
359 2819722534
360 2823529447
361 2842686404
362 2842886226
363 2849143277
364 2852677031
365 2857462901
366 2857467817
367 2857583431
368 2857589563
369 2857594656
370 2857604787
371 2857609663
372 2860840983
373 2864999613
374 2877771878
375 2880172717
376 2881645552
377 2881647962
378 2889299956
379 2897112993
380 2898910523
381 2904528640
382 2904561311
383 2904610255
384 2907202662
385 2908666819
386 2915597317
387 2915611474
388 2916975241
389 2919095166
390 2919148271
391 2919416259
392 2919521962
393 2919725098
394 2919727731
395 2928098389
396 2928515130
397 2929007819
398 2929188770
399 2929238693
400 2936344901
401 2936362467
402 2938922895
403 2939595901
404 2947431771
405 2954777015
406 2956899708
407 2960321204
408 2960378475
409 2962294219
410 2964376396
411 2965766302
412 2969140193
413 2969144429
414 2969769042
415 2969771363
416 2971896547
417 2977255985
418 2979088684
419 2980495979
420 2981286955
421 2981291905
422 2981982592
423 2981987622
424 2990276811
425 3001269024
426 3001274465
427 3001895272
428 3006828739
429 3006862004
430 3006882717
431 3006971569
432 3006976486
433 3006981136
434 3006987047
435 3006992981
436 8002320235
437 8022626478
438 8022633143
439 8022657007
440 8022796431
441 8022894254
442 8022918635
443 8022953266
444 8023441127
445 8023448672
446 8051954507
447 8052175408
448 8054282561
449 8055536204
450 8057587443
451 8057636144
452 8057977358

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

169

262

0.95

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

274

439

0.94

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

53

165

0.94

PF22924

ACOX_C_alpha1

Acyl-CoA oxidase, C-alpha1 domain

281

437

0.9

PF21263

Acyl-CoA-dh_C

Acyl-CoA dehydrogenase, C-terminal domain

485

588

0.89

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

290

431

0.87

PF21343

ACAD9-ACADV_C

ACAD9/ACADV, C-terminal domain

478

581

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3owa-assembly1.cif.gz_A crystal structure of acyl-coa dehydrogenase complexed with fad from bacillus anthracis 0.9924 8 594
3owa-assembly2.cif.gz_D crystal structure of acyl-coa dehydrogenase complexed with fad from bacillus anthracis 0.9924 8 594
3owa-assembly2.cif.gz_C crystal structure of acyl-coa dehydrogenase complexed with fad from bacillus anthracis 0.9922 8 594
3owa-assembly1.cif.gz_A crystal structure of acyl-coa dehydrogenase complexed with fad from bacillus anthracis 0.9907 8 594
3owa-assembly2.cif.gz_D crystal structure of acyl-coa dehydrogenase complexed with fad from bacillus anthracis 0.9907 8 594
ID Description Score Start End Superfamily
3owaB01 Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.9991 8 145 1.10.540.10
3owaD04 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9976 425 594 1.20.140.10
3owaA04 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9946 425 594 1.20.140.10
3owaB01 Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.9918 8 145 1.10.540.10
3owaD04 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9851 425 594 1.20.140.10
ID Description Score Start End GO Terms
AF-A0A351JZ53-F1-model_v4 Acyl-CoA dehydrogenase 0.9952 36 144 GO:0003995
GO:0050660
AF-A0A4U3BWN6-F1-model_v4 deleted 0.9918 1 382
AF-A0A4U3BWN6-F1-model_v4 deleted 0.9892 1 382
AF-A0A661VC80-F1-model_v4 Acyl-CoA dehydrogenase 0.9889 36 312 GO:0003995
GO:0050660
AF-A0A661VC80-F1-model_v4 Acyl-CoA dehydrogenase 0.9819 36 312 GO:0003995
GO:0050660

Map