F337962

General Info

Members Datasets Scaffolds Average Seq Length
225 166 450 192

Family's Representative Sequence

Representative Sequence 3300035086|Ga0373934_0044396|Ga0373934_0044396_98_736
Length 212
Sequence VNTPAGSPPHPSSPGGPAPGDVTERLLRWSSGDEAALQQLIPLVYDECRRIAARQMGRESPEHTLSPTALVNELYLRLVDQRRTTWTSRAHFFGVAAQLMRRVLVDHARSRLAQKREGGRLMVSLGAAAEIATPSPVTDLLAIDDALTALGSLDPDQQRIVELRFFAGLTVDETAHVVGRSPRTVKREWQLAKAWLYRELSARHDDRPGGRR

Samples

Sample ID Description Type Environment
1 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
59 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
69 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
73 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
110 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
111 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
112 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
113 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
114 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
115 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
116 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
117 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
118 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
119 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
120 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
121 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
122 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
123 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
124 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
125 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
126 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
127 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
128 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
129 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
130 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
131 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
132 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
133 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
134 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
135 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
136 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
137 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
140 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
141 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
142 3300049526 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_B_7_control Metagenome Rhizosphere
143 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
149 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
150 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
151 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
152 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
153 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
154 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
155 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
156 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
157 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
158 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
159 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
160 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
161 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
162 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
163 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
164 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
165 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
166 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.44
Nodule 0
Rhizoplane 0.44
Rhizosphere 98.67
Stem 0
Stem Tuber 0
Unclassified 25.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373934_0044396 3300035086 Unclassified 1757
2 JGI24751J29686_10001065 3300002459 Bacteria 5955
3 Ga0070683_100158483 3300005329 Unclassified 2147
4 Ga0070683_100529451 3300005329 Unclassified 1126
5 Ga0070690_100149101 3300005330 Bacteria 1594
6 Ga0070670_100004477 3300005331 Bacteria 11706
7 Ga0070670_100213691 3300005331 Bacteria 1677
8 Ga0070682_100419258 3300005337 Unclassified 1017
9 Ga0068868_100557910 3300005338 Bacteria 1010
10 Ga0070687_100112944 3300005343 Bacteria 1541
11 Ga0070668_100011191 3300005347 Bacteria 6681
12 Ga0070668_100068247 3300005347 Bacteria 2764
13 Ga0070668_100723830 3300005347 Bacteria 879
14 Ga0070669_100054971 3300005353 Unclassified 2916
15 Ga0070675_100012169 3300005354 Bacteria 6745
16 Ga0070671_100109467 3300005355 Bacteria 2320
17 Ga0070671_100534285 3300005355 Bacteria 1010
18 Ga0070674_100015185 3300005356 Unclassified 4803
19 Ga0070659_100152104 3300005366 Unclassified 1888
20 Ga0070713_100003760 3300005436 Bacteria 10046
21 Ga0070711_100098566 3300005439 Bacteria 2122
22 Ga0070700_100142749 3300005441 Bacteria 1629
23 Ga0070694_100041960 3300005444 Bacteria 3054
24 Ga0070662_100052254 3300005457 Bacteria 2953
25 Ga0068867_100174046 3300005459 Unclassified 1707
26 Ga0070706_100315143 3300005467 Bacteria 1459
27 Ga0070707_100471075 3300005468 Bacteria 1217
28 Ga0070698_100034064 3300005471 Bacteria 5276
29 Ga0070684_100929498 3300005535 Unclassified 815
30 Ga0070672_100002899 3300005543 Bacteria 11028
31 Ga0070672_100017577 3300005543 Bacteria 5151
32 Ga0070695_100160360 3300005545 Unclassified 1578
33 Ga0068857_100016682 3300005577 Bacteria 6434
34 Ga0068857_100046259 3300005577 Bacteria 3862
35 Ga0068857_100106213 3300005577 Bacteria 2521
36 Ga0068854_100688444 3300005578 Bacteria 881
37 Ga0068856_100262563 3300005614 Bacteria 1742
38 Ga0068856_101180831 3300005614 Unclassified 782
39 Ga0068859_100012227 3300005617 Bacteria 8632
40 Ga0068859_100255604 3300005617 Bacteria 1842
41 Ga0068864_100881809 3300005618 Unclassified 883
42 Ga0068861_100010864 3300005719 Bacteria 6328
43 Ga0068870_10010478 3300005840 Unclassified 4263
44 Ga0068870_10110935 3300005840 Unclassified 1566
45 Ga0068863_100030145 3300005841 Bacteria 5182
46 Ga0068863_100786093 3300005841 Unclassified 949
47 Ga0068858_100616106 3300005842 Unclassified 1053
48 Ga0068862_100005253 3300005844 Bacteria 10863
49 Ga0068862_100350075 3300005844 Bacteria 1370
50 Ga0068862_100452787 3300005844 Unclassified 1210
51 Ga0097621_100064885 3300006237 Bacteria 3004
52 Ga0068871_100689893 3300006358 Bacteria 935
53 Ga0075428_100011510 3300006844 Bacteria 9838
54 Ga0075428_100258253 3300006844 Bacteria 1876
55 Ga0075430_100002576 3300006846 Bacteria 15124
56 Ga0075430_100007397 3300006846 Bacteria 9270
57 Ga0075430_100025147 3300006846 Bacteria 5064
58 Ga0075430_100157335 3300006846 Bacteria 1891
59 Ga0075431_100015519 3300006847 Bacteria 7720
60 Ga0075431_100063386 3300006847 Bacteria 3814
61 Ga0075431_100288765 3300006847 Unclassified 1660
62 Ga0075433_10043145 3300006852 Bacteria 3915
63 Ga0075434_100857801 3300006871 Bacteria 923
64 Ga0075429_100023301 3300006880 Bacteria 5370
65 Ga0097620_100012225 3300006931 Bacteria 8632
66 Ga0097620_100255599 3300006931 Bacteria 1842
67 Ga0105240_10305710 3300009093 Unclassified 1818
68 Ga0111539_10064446 3300009094 Bacteria 4335
69 Ga0105247_10010141 3300009101 Bacteria 5707
70 Ga0114129_11014640 3300009147 Unclassified 1044
71 Ga0114129_11882830 3300009147 Bacteria 726
72 Ga0105243_10082560 3300009148 Bacteria 2627
73 Ga0105242_10081278 3300009176 Bacteria 2710
74 Ga0105248_10005371 3300009177 Bacteria 14081
75 Ga0105248_10163407 3300009177 Bacteria 2511
76 Ga0105248_10595215 3300009177 Bacteria 1248
77 Ga0105248_11514038 3300009177 Unclassified 760
78 Ga0105237_10844504 3300009545 Bacteria 922
79 Ga0105238_10143413 3300009551 Bacteria 2365
80 Ga0105249_10048475 3300009553 Bacteria 3872
81 Ga0105239_10038287 3300010375 Bacteria 5255
82 Ga0105239_10149201 3300010375 Bacteria 2609
83 Ga0105246_10001467 3300011119 Bacteria 14006
84 Ga0157373_10009345 3300013100 Bacteria 7245
85 Ga0157371_10006863 3300013102 Bacteria 9294
86 Ga0157369_10223817 3300013105 Bacteria 1969
87 Ga0157374_10022821 3300013296 Bacteria 5589
88 Ga0157374_10347792 3300013296 Bacteria 1473
89 Ga0157374_10728406 3300013296 Bacteria 1006
90 Ga0157378_10101008 3300013297 Bacteria 2634
91 Ga0163162_10065960 3300013306 Bacteria 3668
92 Ga0163162_10602083 3300013306 Unclassified 1225
93 Ga0157372_10020480 3300013307 Bacteria 7136
94 Ga0157372_10021982 3300013307 Bacteria 6896
95 Ga0157372_11129691 3300013307 Unclassified 906
96 Ga0157375_10163015 3300013308 Unclassified 2373
97 Ga0157375_10190116 3300013308 Bacteria 2208
98 Ga0163163_10017773 3300014325 Bacteria 6638
99 Ga0163163_10111698 3300014325 Bacteria 2762
100 Ga0163163_10163907 3300014325 Bacteria 2269
101 Ga0163163_10288781 3300014325 Bacteria 1692
102 Ga0157380_10001729 3300014326 Bacteria 14389
103 Ga0157377_10001073 3300014745 Bacteria 11566
104 Ga0157379_10562537 3300014968 Bacteria 1062
105 Ga0157376_10053547 3300014969 Bacteria 3360
106 Ga0163161_10175202 3300017792 Bacteria 1642
107 Ga0213876_10001260 3300021384 Bacteria 15980
108 Ga0207697_10219190 3300025315 Bacteria 839
109 Ga0207710_10088954 3300025900 Bacteria 1443
110 Ga0207647_10351238 3300025904 Bacteria 835
111 Ga0207645_10227897 3300025907 Unclassified 1229
112 Ga0207643_10260271 3300025908 Bacteria 1071
113 Ga0207684_10253085 3300025910 Bacteria 1520
114 Ga0207662_10017301 3300025918 Bacteria 4077
115 Ga0207657_10070689 3300025919 Unclassified 2957
116 Ga0207681_10028451 3300025923 Bacteria 3620
117 Ga0207681_10099949 3300025923 Unclassified 2090
118 Ga0207694_10181305 3300025924 Unclassified 1708
119 Ga0207650_10006999 3300025925 Bacteria 7693
120 Ga0207650_10571954 3300025925 Unclassified 948
121 Ga0207644_10352135 3300025931 Unclassified 1196
122 Ga0207690_10190791 3300025932 Bacteria 1550
123 Ga0207706_10075431 3300025933 Bacteria 2965
124 Ga0207686_10084814 3300025934 Bacteria 2076
125 Ga0207670_10050729 3300025936 Unclassified 2783
126 Ga0207691_10008962 3300025940 Bacteria 9600
127 Ga0207691_10029272 3300025940 Bacteria 5152
128 Ga0207711_10050960 3300025941 Bacteria 3545
129 Ga0207711_10736394 3300025941 Bacteria 919
130 Ga0207689_10015349 3300025942 Bacteria 6484
131 Ga0207661_10095542 3300025944 Unclassified 2485
132 Ga0207679_10021630 3300025945 Unclassified 4365
133 Ga0207712_10033128 3300025961 Bacteria 3491
134 Ga0207712_10101905 3300025961 Bacteria 2136
135 Ga0207668_10027902 3300025972 Bacteria 3684
136 Ga0207668_10488050 3300025972 Bacteria 1058
137 Ga0207703_10105410 3300026035 Bacteria 2396
138 Ga0207678_10279375 3300026067 Bacteria 1433
139 Ga0207708_10268334 3300026075 Bacteria 1380
140 Ga0207702_10783767 3300026078 Unclassified 942
141 Ga0207702_11085330 3300026078 Unclassified 794
142 Ga0207641_10021518 3300026088 Bacteria 5300
143 Ga0207648_10214028 3300026089 Unclassified 1711
144 Ga0207676_10840971 3300026095 Unclassified 897
145 Ga0207674_10016202 3300026116 Bacteria 8164
146 Ga0207674_10645524 3300026116 Unclassified 1022
147 Ga0207675_100019349 3300026118 Bacteria 6353
148 Ga0207683_10137735 3300026121 Bacteria 2198
149 Ga0207683_10825664 3300026121 Bacteria 860
150 Ga0207698_10037832 3300026142 Bacteria 3558
151 Ga0268265_10021392 3300028380 Bacteria 4530
152 Ga0268264_10011354 3300028381 Bacteria 7357
153 Ga0268264_10037862 3300028381 Unclassified 3978
154 Ga0307408_100008829 3300031548 Bacteria 6656
155 Ga0307408_100084694 3300031548 Unclassified 2378
156 Ga0307408_100152073 3300031548 Bacteria 1828
157 Ga0307405_10044062 3300031731 Unclassified 2727
158 Ga0307410_10152642 3300031852 Bacteria 1721
159 Ga0307406_10025419 3300031901 Bacteria 3546
160 Ga0307412_10152831 3300031911 Bacteria 1705
161 Ga0307412_10408186 3300031911 Bacteria 1108
162 Ga0307409_100179467 3300031995 Bacteria 1873
163 Ga0307416_100003219 3300032002 Bacteria 9564
164 Ga0307411_10151223 3300032005 Unclassified 1725
165 Ga0307411_10239592 3300032005 Bacteria 1419
166 Ga0307411_10273824 3300032005 Bacteria 1340
167 Ga0316583_10001147 3300032133 Bacteria 8655
168 Ga0373959_0147742 3300034820 Unclassified 592
169 Ga0373941_0211749 3300035115 Bacteria 741
170 Ga0316574_0032227 3300035398 Bacteria 3184
171 Ga0316574_0524603 3300035398 Bacteria 737
172 Ga0373931_0075092 3300035691 Bacteria 1853
173 Ga0373933_0264993 3300035724 Bacteria 1108
174 Ga0373937_0003243 3300036401 Bacteria 13633
175 Ga0373937_0328399 3300036401 Bacteria 1448
176 Ga0373925_0391335 3300037068 Bacteria 1133
177 Ga0453683_0422926 3300044673 Unclassified 860
178 Ga0453683_0588132 3300044673 Unclassified 725
179 Ga0451576_1221128 3300045051 Unclassified 785
180 Ga0466967_0193496 3300045976 Bacteria 1923
181 Ga0495594_0000944 3300046499 Bacteria 15068
182 Ga0495652_0007286 3300046529 Bacteria 10206
183 Ga0495587_0004015 3300046536 Bacteria 9751
184 Ga0495645_0000550 3300046543 Bacteria 25738
185 Ga0495645_0005310 3300046543 Bacteria 8825
186 Ga0495633_0264419 3300046558 Unclassified 784
187 Ga0495667_0100543 3300046559 Bacteria 1871
188 Ga0495599_0000386 3300046678 Bacteria 25367
189 Ga0495599_0050839 3300046678 Unclassified 2597
190 Ga0495658_0007003 3300046683 Bacteria 5564
191 Ga0495600_0008843 3300046809 Bacteria 6202
192 Ga0495675_0014948 3300047444 Bacteria 4908
193 Ga0495684_0464143 3300047471 Bacteria 877
194 Ga0495602_0091429 3300048088 Bacteria 2524
195 Ga0496113_0812265 3300048916 Unclassified 743
196 Ga0501291_003753 3300049514 Bacteria 1907
197 Ga0501303_008311 3300049526 Bacteria 941
198 Ga0501036_0080260 3300049572 Unclassified 2758
199 Ga0501040_0010269 3300049576 Bacteria 6124
200 Ga0501041_0028559 3300049577 Bacteria 3365
201 Ga0501042_0046285 3300049578 Bacteria 3101
202 Ga0501046_0093587 3300049580 Unclassified 2310
203 Ga0501068_0050048 3300049584 Bacteria 2525
204 Ga0501071_0102071 3300049587 Unclassified 2115
205 Ga0501072_0625395 3300049588 Bacteria 848
206 Ga0501074_0055717 3300049590 Bacteria 2849
207 Ga0501075_0005170 3300049591 Bacteria 8930
208 Ga0501076_0122964 3300049592 Unclassified 2102
209 Ga0501077_0000152 3300049593 Bacteria 38627
210 Ga0501249_040646 3300049679 Bacteria 1054
211 Ga0501080_0004901 3300049742 Bacteria 11927
212 nmdc:mga09592_173990_c1 3300050508 Bacteria 1862
213 nmdc:mga09592_255022_c1 3300050508 Bacteria 1520
214 nmdc:mga0qj67_23951_c1 3300050509 Unclassified 4702
215 nmdc:mga0qj67_3188_c1 3300050509 Bacteria 11813
216 nmdc:mga0qj67_43778_c1 3300050509 Bacteria 3526
217 nmdc:mga06r32_330064_c1 3300050510 Unclassified 1510
218 nmdc:mga08y16_397161_c1 3300050511 Bacteria 1412
219 nmdc:mga0n895_777278_c1 3300050512 Unclassified 949
220 nmdc:mga0n895_985409_c1 3300050512 Unclassified 825
221 nmdc:mga0a205_205261_c1 3300050515 Bacteria 1860
222 Ga0500642_0223825 3300053130 Bacteria 871
223 Ga0590077_057442 3300059426 Unclassified 880
224 Ga0501082_0000116 3300060353 Bacteria 62872
225 Ga0530510_0299593 3300061734 Bacteria 1203
226 Ga0373934_0044396
227 JGI24751J29686_10001065
228 Ga0070683_100158483
229 Ga0070683_100529451
230 Ga0070690_100149101
231 Ga0070670_100004477
232 Ga0070670_100213691
233 Ga0070682_100419258
234 Ga0068868_100557910
235 Ga0070687_100112944
236 Ga0070668_100011191
237 Ga0070668_100068247
238 Ga0070668_100723830
239 Ga0070669_100054971
240 Ga0070675_100012169
241 Ga0070671_100109467
242 Ga0070671_100534285
243 Ga0070674_100015185
244 Ga0070659_100152104
245 Ga0070713_100003760
246 Ga0070711_100098566
247 Ga0070700_100142749
248 Ga0070694_100041960
249 Ga0070662_100052254
250 Ga0068867_100174046
251 Ga0070706_100315143
252 Ga0070707_100471075
253 Ga0070698_100034064
254 Ga0070684_100929498
255 Ga0070672_100002899
256 Ga0070672_100017577
257 Ga0070695_100160360
258 Ga0068857_100016682
259 Ga0068857_100046259
260 Ga0068857_100106213
261 Ga0068854_100688444
262 Ga0068856_100262563
263 Ga0068856_101180831
264 Ga0068859_100012227
265 Ga0068859_100255604
266 Ga0068864_100881809
267 Ga0068861_100010864
268 Ga0068870_10010478
269 Ga0068870_10110935
270 Ga0068863_100030145
271 Ga0068863_100786093
272 Ga0068858_100616106
273 Ga0068862_100005253
274 Ga0068862_100350075
275 Ga0068862_100452787
276 Ga0097621_100064885
277 Ga0068871_100689893
278 Ga0075428_100011510
279 Ga0075428_100258253
280 Ga0075430_100002576
281 Ga0075430_100007397
282 Ga0075430_100025147
283 Ga0075430_100157335
284 Ga0075431_100015519
285 Ga0075431_100063386
286 Ga0075431_100288765
287 Ga0075433_10043145
288 Ga0075434_100857801
289 Ga0075429_100023301
290 Ga0097620_100012225
291 Ga0097620_100255599
292 Ga0105240_10305710
293 Ga0111539_10064446
294 Ga0105247_10010141
295 Ga0114129_11014640
296 Ga0114129_11882830
297 Ga0105243_10082560
298 Ga0105242_10081278
299 Ga0105248_10005371
300 Ga0105248_10163407
301 Ga0105248_10595215
302 Ga0105248_11514038
303 Ga0105237_10844504
304 Ga0105238_10143413
305 Ga0105249_10048475
306 Ga0105239_10038287
307 Ga0105239_10149201
308 Ga0105246_10001467
309 Ga0157373_10009345
310 Ga0157371_10006863
311 Ga0157369_10223817
312 Ga0157374_10022821
313 Ga0157374_10347792
314 Ga0157374_10728406
315 Ga0157378_10101008
316 Ga0163162_10065960
317 Ga0163162_10602083
318 Ga0157372_10020480
319 Ga0157372_10021982
320 Ga0157372_11129691
321 Ga0157375_10163015
322 Ga0157375_10190116
323 Ga0163163_10017773
324 Ga0163163_10111698
325 Ga0163163_10163907
326 Ga0163163_10288781
327 Ga0157380_10001729
328 Ga0157377_10001073
329 Ga0157379_10562537
330 Ga0157376_10053547
331 Ga0163161_10175202
332 Ga0213876_10001260
333 Ga0207697_10219190
334 Ga0207710_10088954
335 Ga0207647_10351238
336 Ga0207645_10227897
337 Ga0207643_10260271
338 Ga0207684_10253085
339 Ga0207662_10017301
340 Ga0207657_10070689
341 Ga0207681_10028451
342 Ga0207681_10099949
343 Ga0207694_10181305
344 Ga0207650_10006999
345 Ga0207650_10571954
346 Ga0207644_10352135
347 Ga0207690_10190791
348 Ga0207706_10075431
349 Ga0207686_10084814
350 Ga0207670_10050729
351 Ga0207691_10008962
352 Ga0207691_10029272
353 Ga0207711_10050960
354 Ga0207711_10736394
355 Ga0207689_10015349
356 Ga0207661_10095542
357 Ga0207679_10021630
358 Ga0207712_10033128
359 Ga0207712_10101905
360 Ga0207668_10027902
361 Ga0207668_10488050
362 Ga0207703_10105410
363 Ga0207678_10279375
364 Ga0207708_10268334
365 Ga0207702_10783767
366 Ga0207702_11085330
367 Ga0207641_10021518
368 Ga0207648_10214028
369 Ga0207676_10840971
370 Ga0207674_10016202
371 Ga0207674_10645524
372 Ga0207675_100019349
373 Ga0207683_10137735
374 Ga0207683_10825664
375 Ga0207698_10037832
376 Ga0268265_10021392
377 Ga0268264_10011354
378 Ga0268264_10037862
379 Ga0307408_100008829
380 Ga0307408_100084694
381 Ga0307408_100152073
382 Ga0307405_10044062
383 Ga0307410_10152642
384 Ga0307406_10025419
385 Ga0307412_10152831
386 Ga0307412_10408186
387 Ga0307409_100179467
388 Ga0307416_100003219
389 Ga0307411_10151223
390 Ga0307411_10239592
391 Ga0307411_10273824
392 Ga0316583_10001147
393 Ga0373959_0147742
394 Ga0373941_0211749
395 Ga0316574_0032227
396 Ga0316574_0524603
397 Ga0373931_0075092
398 Ga0373933_0264993
399 Ga0373937_0003243
400 Ga0373937_0328399
401 Ga0373925_0391335
402 Ga0453683_0422926
403 Ga0453683_0588132
404 Ga0451576_1221128
405 Ga0466967_0193496
406 Ga0495594_0000944
407 Ga0495652_0007286
408 Ga0495587_0004015
409 Ga0495645_0000550
410 Ga0495645_0005310
411 Ga0495633_0264419
412 Ga0495667_0100543
413 Ga0495599_0000386
414 Ga0495599_0050839
415 Ga0495658_0007003
416 Ga0495600_0008843
417 Ga0495675_0014948
418 Ga0495684_0464143
419 Ga0495602_0091429
420 Ga0496113_0812265
421 Ga0501291_003753
422 Ga0501303_008311
423 Ga0501036_0080260
424 Ga0501040_0010269
425 Ga0501041_0028559
426 Ga0501042_0046285
427 Ga0501046_0093587
428 Ga0501068_0050048
429 Ga0501071_0102071
430 Ga0501072_0625395
431 Ga0501074_0055717
432 Ga0501075_0005170
433 Ga0501076_0122964
434 Ga0501077_0000152
435 Ga0501249_040646
436 Ga0501080_0004901
437 nmdc:mga09592_173990_c1
438 nmdc:mga09592_255022_c1
439 nmdc:mga0qj67_23951_c1
440 nmdc:mga0qj67_3188_c1
441 nmdc:mga0qj67_43778_c1
442 nmdc:mga06r32_330064_c1
443 nmdc:mga08y16_397161_c1
444 nmdc:mga0n895_777278_c1
445 nmdc:mga0n895_985409_c1
446 nmdc:mga0a205_205261_c1
447 Ga0500642_0223825
448 Ga0590077_057442
449 Ga0501082_0000116
450 Ga0530510_0299593

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07638

Sigma70_ECF

ECF sigma factor

19

202

0.98

PF04545

Sigma70_r4

Sigma-70, region 4

149

188

0.97

PF08281

Sigma70_r4_2

Sigma-70, region 4

143

196

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5fgm-assembly1.cif.gz_A streptomyces coelicolor sigr region 4 0.9096 126 188
3vfz-assembly3.cif.gz_A crystal structure of -35 promoter binding domain of sigd of mycobacterium tuberculosis 0.9066 125 184
3hug-assembly2.cif.gz_E crystal structure of mycobacterium tuberculosis anti-sigma factor rsla in complex with -35 promoter binding domain of sigl 0.8991 126 189
6jny-assembly1.cif.gz_A crystal structure of bacteriophage 21 q protein 0.8785 125 194
3hug-assembly6.cif.gz_M crystal structure of mycobacterium tuberculosis anti-sigma factor rsla in complex with -35 promoter binding domain of sigl 0.8771 126 187
ID Description Score Start End Superfamily
3hugG00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8838 126 187 1.10.10.10
3hugO00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8799 126 187 1.10.10.10
3vfzA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8778 124 184 1.10.10.10
3hugK00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8739 126 189 1.10.10.10
3hugC00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8738 126 189 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A4U5JV14-F1-model_v4 Sigma-70 family RNA polymerase sigma factor 0.8891 6 188 GO:0006352
GO:0016987
AF-A0A2V8G6E6-F1-model_v4 RNA polymerase subunit sigma-70 0.8807 81 188 GO:0016987
AF-A0A7Y3MSK9-F1-model_v4 Sigma-70 family RNA polymerase sigma factor 0.8748 23 194 GO:0006352
GO:0016987
AF-A0A2V8MFR8-F1-model_v4 RNA polymerase subunit sigma-70 0.8722 61 188 GO:0006352
GO:0016987
AF-A0A1H3LN00-F1-model_v4 RNA polymerase sigma factor, TIGR02999 family 0.8689 18 187 GO:0003700
GO:0006352

Map