F337558

General Info

Members Datasets Scaffolds Average Seq Length
225 144 450 737

Family's Representative Sequence

Representative Sequence 3300005536|Ga0070697_100030934|Ga0070697_1000309344
Length 791
Sequence LTFFRAQKFRPFAFVLLQAEYRFHIFSGGLMKDVALVSILLLLALPFVPITSTTTADEPVLFGFSSESSRAERQWEEKFKAIPNPQLMRDYMQRLSARPHNVGTAYDKDNAEWLAAKFKEFGLDTHIETFDILFPTPKERVVELTEGGPKFVAKLQEPAVAQDPTSSQQSEQLPTYNAYSIDGDVTAPLVFVNYGIPEDYEQLERMGVSVKGAIVIAKYGHSWRGIKPKVAAEHGAVGCLIYSDPNEDGFKQGETFPAGAWRPRDGVQRGSVADDPIYPGDPLTPGVGATKNAKRLELKDAQVITKIPVLPISYGDAEPLLAAITGAVAPRAWRGGLGLTYHIGPGAAKVHLKVKSNWDLKTIYDVIGEIPGTTNADQWIIRGNHHDAWVNGAEDPISGLIAVMEEARAMGELVKAGWKPKRTIIFCAWDAEEPGLIGSTEFAEEHADELKAHAVVYINSDVNARGFFGAEGSHTLEKFINDVARDVQDPETKLSVWKRAQLRQIGRSDESAGRQEARSRPDLRIGALGSGSDYGAFLQHDGVAALNLGFGGEDGGGIYHSIYDDFYWFTHFSDTDFVYGRALAQMAGTAVMRLADADLLPFEYGNFSDTIQTYVKELKTLAQKSRDEIIERNRELEEGVFAAVTDPRVKSVPPTKEAVPPFLNFAPLDNATESLVRASAEYKKALERATANGGAAIRKASLIEANRSLAESEHKLTLEEGLPGRPWFKHFVDAPGQYTGYEAKTLPVVREAIEQKQWKEADAGIVVTARVLETEAAHILSVAQKLDAAVR

Samples

Sample ID Description Type Environment
1 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
2 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
3 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
30 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
31 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
32 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
43 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
52 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
53 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
54 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
80 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
81 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
82 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
83 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
84 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
85 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
86 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
87 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
88 3300030879 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
89 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
90 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
91 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
92 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
93 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
94 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
95 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
96 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
97 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
98 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
99 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
100 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
101 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
102 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
103 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
104 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
105 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
109 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
110 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
111 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
112 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
113 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
114 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
115 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
116 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
117 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
118 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
119 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
120 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
121 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
122 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
123 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
124 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
125 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
126 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
127 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
128 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
129 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
130 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
131 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
132 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
133 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
134 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
135 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
136 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
137 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
138 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
139 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
140 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
141 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
142 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
143 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
144 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.56
Metatranscriptomes 0.44
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.89
Nodule 0
Rhizoplane 4
Rhizosphere 90.67
Stem 0
Stem Tuber 0
Unclassified 10.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070697_100030934 3300005536 Bacteria 4302
2 JGI25160J50197_1001126 3300003354 Bacteria 13660
3 Ga0070677_10005416 3300005333 Bacteria 4205
4 Ga0070666_10035802 3300005335 Unclassified 3292
5 Ga0070680_100008658 3300005336 Bacteria 7799
6 Ga0070680_100014476 3300005336 Bacteria 6170
7 Ga0070682_100020892 3300005337 Unclassified 3858
8 Ga0070660_100001487 3300005339 Bacteria 16044
9 Ga0070688_100021801 3300005365 Bacteria 3746
10 Ga0070659_100024114 3300005366 Bacteria 4662
11 Ga0070709_10001567 3300005434 Bacteria 12343
12 Ga0070709_10002572 3300005434 Bacteria 9815
13 Ga0070714_100012375 3300005435 Bacteria 6811
14 Ga0070714_100017708 3300005435 Bacteria 5777
15 Ga0070714_100032242 3300005435 Unclassified 4372
16 Ga0070714_100051682 3300005435 Unclassified 3505
17 Ga0070714_100057030 3300005435 Bacteria 3342
18 Ga0070713_100000455 3300005436 Bacteria 26196
19 Ga0070713_100001222 3300005436 Bacteria 16427
20 Ga0070713_100003483 3300005436 Bacteria 10379
21 Ga0070713_100003662 3300005436 Bacteria 10173
22 Ga0070711_100000138 3300005439 Bacteria 38924
23 Ga0070711_100042599 3300005439 Bacteria 3070
24 Ga0070678_100010820 3300005456 Bacteria 5593
25 Ga0070681_10017725 3300005458 Bacteria 7116
26 Ga0070681_10021310 3300005458 Bacteria 6497
27 Ga0070681_10039260 3300005458 Bacteria 4746
28 Ga0068867_100067846 3300005459 Unclassified 2660
29 Ga0070706_100019901 3300005467 Bacteria 6188
30 Ga0070707_100005726 3300005468 Bacteria 11594
31 Ga0070698_100000026 3300005471 Bacteria 98301
32 Ga0070679_100000123 3300005530 Bacteria 61754
33 Ga0070679_100039894 3300005530 Bacteria 4667
34 Ga0070679_100093824 3300005530 Unclassified 2988
35 Ga0070697_100012602 3300005536 Bacteria 6622
36 Ga0068853_100026127 3300005539 Unclassified 4902
37 Ga0070665_100007371 3300005548 Bacteria 11189
38 Ga0070665_100151899 3300005548 Unclassified 2318
39 Ga0068855_100001313 3300005563 Bacteria 30797
40 Ga0068856_100001347 3300005614 Bacteria 25803
41 Ga0068856_100012732 3300005614 Bacteria 8143
42 Ga0068856_100034973 3300005614 Bacteria 4923
43 Ga0068859_100149810 3300005617 Bacteria 2409
44 Ga0068864_100057818 3300005618 Unclassified 3351
45 Ga0068863_100001581 3300005841 Bacteria 22535
46 Ga0070717_10054454 3300006028 Bacteria 3299
47 Ga0070716_100000904 3300006173 Bacteria 12816
48 Ga0070716_100006768 3300006173 Bacteria 5617
49 Ga0070712_100000484 3300006175 Bacteria 22755
50 Ga0070712_100001333 3300006175 Bacteria 14967
51 Ga0070712_100013600 3300006175 Bacteria 5204
52 Ga0068871_100033629 3300006358 Unclassified 4062
53 Ga0075433_10005520 3300006852 Bacteria 9931
54 Ga0075434_100000069 3300006871 Bacteria 53659
55 Ga0075434_100025208 3300006871 Bacteria 5819
56 Ga0075429_100105387 3300006880 Unclassified 2462
57 Ga0075436_100000999 3300006914 Bacteria 18979
58 Ga0075436_100040480 3300006914 Bacteria 3216
59 Ga0097620_100149802 3300006931 Bacteria 2409
60 Ga0075435_100040538 3300007076 Bacteria 3719
61 Ga0105240_10000690 3300009093 Bacteria 62106
62 Ga0105240_10002119 3300009093 Bacteria 32449
63 Ga0105245_10006701 3300009098 Bacteria 10103
64 Ga0105242_10007940 3300009176 Bacteria 8173
65 Ga0105238_10003585 3300009551 Bacteria 15480
66 Ga0099796_10005553 3300010159 Unclassified 3155
67 Ga0157371_10027653 3300013102 Bacteria 4111
68 Ga0157369_10026965 3300013105 Bacteria 6371
69 Ga0157378_10000097 3300013297 Bacteria 82132
70 Ga0163162_10128312 3300013306 Bacteria 2644
71 Ga0157372_10000419 3300013307 Bacteria 46619
72 Ga0157372_10003881 3300013307 Bacteria 16063
73 Ga0157372_10045331 3300013307 Bacteria 4877
74 Ga0163163_10008649 3300014325 Bacteria 9056
75 Ga0163163_10044423 3300014325 Bacteria 4359
76 Ga0157379_10002214 3300014968 Bacteria 16179
77 Ga0157379_10028628 3300014968 Bacteria 4955
78 Ga0157376_10000030 3300014969 Bacteria 181885
79 Ga0157376_10000631 3300014969 Bacteria 22848
80 Ga0213876_10000115 3300021384 Bacteria 87113
81 Ga0213875_10000006 3300021388 Bacteria 579005
82 Ga0207426_1000230 3300025302 Bacteria 128357
83 Ga0207682_10011626 3300025893 Bacteria 3439
84 Ga0207699_10001810 3300025906 Bacteria 10048
85 Ga0207699_10001896 3300025906 Bacteria 9843
86 Ga0207654_10003941 3300025911 Bacteria 7473
87 Ga0207707_10004963 3300025912 Bacteria 11690
88 Ga0207707_10015509 3300025912 Bacteria 6637
89 Ga0207707_10062422 3300025912 Unclassified 3242
90 Ga0207695_10001035 3300025913 Bacteria 48857
91 Ga0207693_10000022 3300025915 Bacteria 127887
92 Ga0207693_10000820 3300025915 Bacteria 27693
93 Ga0207663_10000695 3300025916 Bacteria 14916
94 Ga0207660_10005161 3300025917 Bacteria 8490
95 Ga0207657_10015577 3300025919 Bacteria 7359
96 Ga0207652_10001465 3300025921 Bacteria 20880
97 Ga0207646_10009940 3300025922 Bacteria 9354
98 Ga0207694_10009853 3300025924 Bacteria 7214
99 Ga0207687_10018792 3300025927 Unclassified 4569
100 Ga0207700_10000581 3300025928 Bacteria 21357
101 Ga0207700_10000914 3300025928 Bacteria 16924
102 Ga0207700_10007502 3300025928 Bacteria 6671
103 Ga0207700_10008294 3300025928 Bacteria 6423
104 Ga0207664_10002694 3300025929 Bacteria 11783
105 Ga0207664_10005708 3300025929 Bacteria 8504
106 Ga0207706_10005291 3300025933 Bacteria 12031
107 Ga0207686_10006094 3300025934 Bacteria 6476
108 Ga0207704_10017385 3300025938 Unclassified 3726
109 Ga0207665_10009675 3300025939 Bacteria 6330
110 Ga0207665_10031969 3300025939 Bacteria 3484
111 Ga0207665_10034878 3300025939 Unclassified 3339
112 Ga0207665_10046873 3300025939 Bacteria 2896
113 Ga0207667_10000163 3300025949 Bacteria 98321
114 Ga0207678_10000212 3300026067 Bacteria 51660
115 Ga0207702_10000425 3300026078 Bacteria 48324
116 Ga0207641_10000952 3300026088 Bacteria 29742
117 Ga0207683_10005695 3300026121 Bacteria 10689
118 Ga0207683_10063933 3300026121 Unclassified 3242
119 Ga0268266_10013465 3300028379 Bacteria 7040
120 Ga0265326_10000373 3300028558 Bacteria 18674
121 Ga0265326_10008670 3300028558 Bacteria 3057
122 Ga0265319_1001817 3300028563 Bacteria 12172
123 Ga0265334_10000020 3300028573 Bacteria 133852
124 Ga0265334_10000226 3300028573 Bacteria 32363
125 Ga0265318_10015368 3300028577 Bacteria 3186
126 Ga0265323_10001126 3300028653 Bacteria 13794
127 Ga0265322_10000970 3300028654 Bacteria 9952
128 Ga0265336_10001144 3300028666 Bacteria 12697
129 Ga0265338_10014866 3300028800 Bacteria 8609
130 Ga0265338_10017330 3300028800 Bacteria 7773
131 Ga0265338_10019672 3300028800 Bacteria 7145
132 Ga0265338_10082377 3300028800 Bacteria 2694
133 Ga0265324_10009332 3300029957 Bacteria 3837
134 Ga0265324_10009975 3300029957 Bacteria 3688
135 Ga0265765_1000200 3300030879 Bacteria 4058
136 Ga0265330_10032111 3300031235 Bacteria 2354
137 Ga0265320_10024425 3300031240 Bacteria 3196
138 Ga0265325_10002833 3300031241 Bacteria 11567
139 Ga0265325_10003330 3300031241 Bacteria 10562
140 Ga0265325_10005851 3300031241 Bacteria 7534
141 Ga0265329_10003080 3300031242 Bacteria 7385
142 Ga0265340_10002899 3300031247 Bacteria 9767
143 Ga0265340_10011802 3300031247 Bacteria 4631
144 Ga0265339_10000124 3300031249 Bacteria 64124
145 Ga0265339_10019926 3300031249 Bacteria 3927
146 Ga0265339_10035526 3300031249 Bacteria 2795
147 Ga0265331_10002276 3300031250 Bacteria 13115
148 Ga0265316_10001026 3300031344 Bacteria 30252
149 Ga0265316_10002425 3300031344 Bacteria 19373
150 Ga0265316_10006640 3300031344 Bacteria 11019
151 Ga0265316_10008983 3300031344 Bacteria 9218
152 Ga0265316_10027491 3300031344 Bacteria 4709
153 Ga0265316_10030931 3300031344 Bacteria 4382
154 Ga0265316_10069801 3300031344 Bacteria 2711
155 Ga0265313_10000148 3300031595 Bacteria 73384
156 Ga0265313_10002325 3300031595 Bacteria 16658
157 Ga0265313_10004573 3300031595 Bacteria 10538
158 Ga0265313_10013495 3300031595 Unclassified 4898
159 Ga0265314_10008462 3300031711 Bacteria 8807
160 Ga0265314_10040934 3300031711 Bacteria 3321
161 Ga0265342_10005414 3300031712 Bacteria 9742
162 Ga0307510_10041292 3300033180 Bacteria 5047
163 Ga0373953_0021948 3300035117 Bacteria 2401
164 Ga0373954_0000089 3300035118 Bacteria 31233
165 Ga0373946_0007435 3300035171 Bacteria 4006
166 Ga0373924_0006242 3300035410 Bacteria 4261
167 Ga0373933_0000224 3300035724 Bacteria 37593
168 Ga0373937_0022366 3300036401 Bacteria 5685
169 Ga0373925_0000529 3300037068 Bacteria 37826
170 Ga0436364_0433684 3300037853 Bacteria 5056
171 Ga0436364_0454577 3300037853 Bacteria 5115
172 Ga0436364_0478514 3300037853 Bacteria 578677
173 Ga0436365_0507621 3300039437 Bacteria 122643
174 Ga0436365_0616542 3300039437 Bacteria 5743
175 Ga0436363_1677843 3300039450 Bacteria 4806
176 Ga0495629_0029329 3300046459 Bacteria 3903
177 Ga0495651_0000246 3300046462 Bacteria 41958
178 Ga0495580_0001634 3300046472 Bacteria 19724
179 Ga0495580_0006234 3300046472 Bacteria 9747
180 Ga0495580_0009871 3300046472 Bacteria 7479
181 Ga0495582_0006261 3300046473 Bacteria 6633
182 Ga0495594_0017892 3300046499 Unclassified 3749
183 Ga0495594_0018419 3300046499 Bacteria 3698
184 Ga0495630_0037883 3300046517 Bacteria 3605
185 Ga0495665_0028481 3300046531 Unclassified 2995
186 Ga0495587_0001053 3300046536 Bacteria 18165
187 Ga0495587_0002144 3300046536 Bacteria 13197
188 Ga0495667_0000539 3300046559 Bacteria 24198
189 Ga0495667_0014758 3300046559 Bacteria 5280
190 Ga0495634_0023548 3300046642 Bacteria 4326
191 Ga0495657_0061923 3300046675 Unclassified 2474
192 Ga0495623_0013404 3300046679 Bacteria 5314
193 Ga0495658_0034071 3300046683 Bacteria 2792
194 Ga0495624_0032955 3300046690 Bacteria 3357
195 Ga0495581_0038140 3300047315 Unclassified 2780
196 Ga0495604_0000647 3300047317 Bacteria 29822
197 Ga0495674_0094341 3300047319 Bacteria 2552
198 Ga0495676_0020932 3300047321 Bacteria 5727
199 Ga0495680_0000106 3300047322 Bacteria 77255
200 Ga0495684_0019024 3300047471 Bacteria 5288
201 Ga0495684_0031559 3300047471 Bacteria 4068
202 Ga0495684_0047369 3300047471 Bacteria 3288
203 Ga0495602_0000957 3300048088 Bacteria 27907
204 Ga0496104_0034209 3300048907 Bacteria 4737
205 Ga0496108_0025735 3300048911 Bacteria 4852
206 Ga0496112_0005882 3300048915 Bacteria 10685
207 Ga0496112_0047524 3300048915 Unclassified 4210
208 Ga0496112_0141611 3300048915 Bacteria 2374
209 Ga0496114_0021119 3300048917 Bacteria 5294
210 Ga0496115_0003275 3300048918 Bacteria 11619
211 Ga0496115_0006613 3300048918 Bacteria 8498
212 Ga0496115_0048223 3300048918 Bacteria 3407
213 Ga0496126_0000091 3300048929 Bacteria 209427
214 Ga0501034_0110914 3300049571 Bacteria 2734
215 nmdc:mga0n895_12073_c1 3300050512 Bacteria 7730
216 nmdc:mga0n895_514_c1 3300050512 Bacteria 26317
217 nmdc:mga0n895_5495_c1 3300050512 Bacteria 10603
218 nmdc:mga0rr50_50742_c1 3300050513 Bacteria 3075
219 nmdc:mga08x19_29879_c1 3300050514 Bacteria 3420
220 nmdc:mga08x19_358_c1 3300050514 Bacteria 32697
221 nmdc:mga08x19_3595_c1 3300050514 Bacteria 9226
222 nmdc:mga08x19_5210_c1 3300050514 Bacteria 7691
223 nmdc:mga0a205_1302_c2 3300050515 Bacteria 11472
224 Ga0495601_0003955 3300053077 Bacteria 8534
225 Ga0495619_0029355 3300053085 Bacteria 3552
226 Ga0070697_100030934
227 JGI25160J50197_1001126
228 Ga0070677_10005416
229 Ga0070666_10035802
230 Ga0070680_100008658
231 Ga0070680_100014476
232 Ga0070682_100020892
233 Ga0070660_100001487
234 Ga0070688_100021801
235 Ga0070659_100024114
236 Ga0070709_10001567
237 Ga0070709_10002572
238 Ga0070714_100012375
239 Ga0070714_100017708
240 Ga0070714_100032242
241 Ga0070714_100051682
242 Ga0070714_100057030
243 Ga0070713_100000455
244 Ga0070713_100001222
245 Ga0070713_100003483
246 Ga0070713_100003662
247 Ga0070711_100000138
248 Ga0070711_100042599
249 Ga0070678_100010820
250 Ga0070681_10017725
251 Ga0070681_10021310
252 Ga0070681_10039260
253 Ga0068867_100067846
254 Ga0070706_100019901
255 Ga0070707_100005726
256 Ga0070698_100000026
257 Ga0070679_100000123
258 Ga0070679_100039894
259 Ga0070679_100093824
260 Ga0070697_100012602
261 Ga0068853_100026127
262 Ga0070665_100007371
263 Ga0070665_100151899
264 Ga0068855_100001313
265 Ga0068856_100001347
266 Ga0068856_100012732
267 Ga0068856_100034973
268 Ga0068859_100149810
269 Ga0068864_100057818
270 Ga0068863_100001581
271 Ga0070717_10054454
272 Ga0070716_100000904
273 Ga0070716_100006768
274 Ga0070712_100000484
275 Ga0070712_100001333
276 Ga0070712_100013600
277 Ga0068871_100033629
278 Ga0075433_10005520
279 Ga0075434_100000069
280 Ga0075434_100025208
281 Ga0075429_100105387
282 Ga0075436_100000999
283 Ga0075436_100040480
284 Ga0097620_100149802
285 Ga0075435_100040538
286 Ga0105240_10000690
287 Ga0105240_10002119
288 Ga0105245_10006701
289 Ga0105242_10007940
290 Ga0105238_10003585
291 Ga0099796_10005553
292 Ga0157371_10027653
293 Ga0157369_10026965
294 Ga0157378_10000097
295 Ga0163162_10128312
296 Ga0157372_10000419
297 Ga0157372_10003881
298 Ga0157372_10045331
299 Ga0163163_10008649
300 Ga0163163_10044423
301 Ga0157379_10002214
302 Ga0157379_10028628
303 Ga0157376_10000030
304 Ga0157376_10000631
305 Ga0213876_10000115
306 Ga0213875_10000006
307 Ga0207426_1000230
308 Ga0207682_10011626
309 Ga0207699_10001810
310 Ga0207699_10001896
311 Ga0207654_10003941
312 Ga0207707_10004963
313 Ga0207707_10015509
314 Ga0207707_10062422
315 Ga0207695_10001035
316 Ga0207693_10000022
317 Ga0207693_10000820
318 Ga0207663_10000695
319 Ga0207660_10005161
320 Ga0207657_10015577
321 Ga0207652_10001465
322 Ga0207646_10009940
323 Ga0207694_10009853
324 Ga0207687_10018792
325 Ga0207700_10000581
326 Ga0207700_10000914
327 Ga0207700_10007502
328 Ga0207700_10008294
329 Ga0207664_10002694
330 Ga0207664_10005708
331 Ga0207706_10005291
332 Ga0207686_10006094
333 Ga0207704_10017385
334 Ga0207665_10009675
335 Ga0207665_10031969
336 Ga0207665_10034878
337 Ga0207665_10046873
338 Ga0207667_10000163
339 Ga0207678_10000212
340 Ga0207702_10000425
341 Ga0207641_10000952
342 Ga0207683_10005695
343 Ga0207683_10063933
344 Ga0268266_10013465
345 Ga0265326_10000373
346 Ga0265326_10008670
347 Ga0265319_1001817
348 Ga0265334_10000020
349 Ga0265334_10000226
350 Ga0265318_10015368
351 Ga0265323_10001126
352 Ga0265322_10000970
353 Ga0265336_10001144
354 Ga0265338_10014866
355 Ga0265338_10017330
356 Ga0265338_10019672
357 Ga0265338_10082377
358 Ga0265324_10009332
359 Ga0265324_10009975
360 Ga0265765_1000200
361 Ga0265330_10032111
362 Ga0265320_10024425
363 Ga0265325_10002833
364 Ga0265325_10003330
365 Ga0265325_10005851
366 Ga0265329_10003080
367 Ga0265340_10002899
368 Ga0265340_10011802
369 Ga0265339_10000124
370 Ga0265339_10019926
371 Ga0265339_10035526
372 Ga0265331_10002276
373 Ga0265316_10001026
374 Ga0265316_10002425
375 Ga0265316_10006640
376 Ga0265316_10008983
377 Ga0265316_10027491
378 Ga0265316_10030931
379 Ga0265316_10069801
380 Ga0265313_10000148
381 Ga0265313_10002325
382 Ga0265313_10004573
383 Ga0265313_10013495
384 Ga0265314_10008462
385 Ga0265314_10040934
386 Ga0265342_10005414
387 Ga0307510_10041292
388 Ga0373953_0021948
389 Ga0373954_0000089
390 Ga0373946_0007435
391 Ga0373924_0006242
392 Ga0373933_0000224
393 Ga0373937_0022366
394 Ga0373925_0000529
395 Ga0436364_0433684
396 Ga0436364_0454577
397 Ga0436364_0478514
398 Ga0436365_0507621
399 Ga0436365_0616542
400 Ga0436363_1677843
401 Ga0495629_0029329
402 Ga0495651_0000246
403 Ga0495580_0001634
404 Ga0495580_0006234
405 Ga0495580_0009871
406 Ga0495582_0006261
407 Ga0495594_0017892
408 Ga0495594_0018419
409 Ga0495630_0037883
410 Ga0495665_0028481
411 Ga0495587_0001053
412 Ga0495587_0002144
413 Ga0495667_0000539
414 Ga0495667_0014758
415 Ga0495634_0023548
416 Ga0495657_0061923
417 Ga0495623_0013404
418 Ga0495658_0034071
419 Ga0495624_0032955
420 Ga0495581_0038140
421 Ga0495604_0000647
422 Ga0495674_0094341
423 Ga0495676_0020932
424 Ga0495680_0000106
425 Ga0495684_0019024
426 Ga0495684_0031559
427 Ga0495684_0047369
428 Ga0495602_0000957
429 Ga0496104_0034209
430 Ga0496108_0025735
431 Ga0496112_0005882
432 Ga0496112_0047524
433 Ga0496112_0141611
434 Ga0496114_0021119
435 Ga0496115_0003275
436 Ga0496115_0006613
437 Ga0496115_0048223
438 Ga0496126_0000091
439 Ga0501034_0110914
440 nmdc:mga0n895_12073_c1
441 nmdc:mga0n895_514_c1
442 nmdc:mga0n895_5495_c1
443 nmdc:mga0rr50_50742_c1
444 nmdc:mga08x19_29879_c1
445 nmdc:mga08x19_358_c1
446 nmdc:mga08x19_3595_c1
447 nmdc:mga08x19_5210_c1
448 nmdc:mga0a205_1302_c2
449 Ga0495601_0003955
450 Ga0495619_0029355

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04253

TFR_dimer

Transferrin receptor-like dimerisation domain

663

781

0.91

PF02225

PA

PA domain

185

320

0.84

PF04389

Peptidase_M28

Peptidase family M28

365

573

0.65

Structural Annotation

Top 5 Hits

ID Description Score Start End
6w3h-assembly2.cif.gz_C brain delivery of therapeutic proteins using an fc fragment blood-brain barrier transport vehicle in mice and monkeys 0.9117 151 206
2c6g-assembly1.cif.gz_A-2 membrane-bound glutamate carboxypeptidase ii (gcpii) with bound glutamate 0.9079 41 736
4p4d-assembly1.cif.gz_A-2 x-ray structure of human glutamate carboxypeptidase ii (gcpii) in complex with a phosphoramidate inhibitor mp1c 0.9062 40 736
2c6c-assembly1.cif.gz_A-2 membrane-bound glutamate carboxypeptidase ii (gcpii) in complex with gpi-18431 (s)-2-(4-iodobenzylphosphonomethyl)-pentanedioic acid 0.9056 40 736
4p4j-assembly1.cif.gz_A-2 x-ray structure of human glutamate carboxypeptidase ii (gcpii) in complex with a phosphoramidate inhibitor t33d 0.9055 40 736
ID Description Score Start End Superfamily
af_A0A0P0V7Z3_139_319_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9205 326 514 3.40.630.10
1z8lD02 Alpha Beta;3-Layer(bba) Sandwich;Glucose Oxidase; domain 1; 0.8965 104 316 3.50.30.30
5of0A01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8949 41 564 3.40.630.10
af_A0A0P0V830_582_730_1.20.930.40 Mainly Alpha;Up-down Bundle;Transcription Elongation Factor S-II; Chain A;Transferrin receptor-like, dimerisation domain 0.8911 626 738 1.20.930.40
4tweB02 Alpha Beta;3-Layer(bba) Sandwich;Glucose Oxidase; domain 1; 0.886 102 316 3.50.30.30
ID Description Score Start End GO Terms
AF-A0A7Y2YFP6-F1-model_v4 M28 family peptidase 0.9846 144 739
AF-A0A7Y3IEK8-F1-model_v4 Folate hydrolase 0.9821 57 231 GO:0016787
AF-A0A6N8XXK1-F1-model_v4 deleted 0.9815 40 740
AF-A0A7K1ZNG7-F1-model_v4 M28 family peptidase 0.9813 68 740
AF-A0A537K5C8-F1-model_v4 M28 family peptidase 0.9808 227 740

Map