F337265

General Info

Members Datasets Scaffolds Average Seq Length
224 191 185 730

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2842698319|2842700230
Length 837
Sequence ESDAIAKGTDAEEQEAALAAEDSHGENGPGEDDLDSRTPNAAPAKGPAPRRRPAGAGTVRAPAAHARVTKPASTASKSRPGATAQDSASADDAETDSILVETVIADTVPERAAAEPPARESVLAAGRALRESPERFVNRELSWLQFNRRVLEEASNTSHPLLEQLRFLSISANNLDEFFMVRVAGLHDQVRAGLIQPSQDGLSPAEQLARIGSEVSRLALDQQRRWRELRDDLHGVGIDLVEPGDLTPEHKSWLEEYFLSHVFPVLTPLAIDPAHPFPFLSNLGSSIALMMVRPRDGRTLRALIRLPSVLGRFVRLPDMAGDTTARFIAIEQLIVLFTGRLFPGYFVKGQGAFRVIRDSDLEIEEEAEDLVLHFETALKQRRRGVVIRLEVEAGMPEDLRAFVADELEIGYDAIFVVEGMLALNELAQIVGIDRPDLKFKSYNPRFPERIRESGGDVFAAIRQKDFIVHHPYESFDSVVQFLAQAARDPNVVAIKQTLYRTSSNSPIVAALAEAAELGKSVTALVELKARFDEEANIRWARDLEKAGAQVVFGFIELKTHAKLSMVVRREGDKLVTYCHVGTGNYHPITARVYTDQSFFTADPAVARDVSRIFNYITGYAEPAELERMSVSPLTLKPRLIESIAAEVAHAKAGRPAAIWIKCNSLVDAQIIDALYDASQAGVQIDCVVRGICCLRPGIPGLSETIRVKSIVGRFLEHGRIYAFGNGFGLPHPKATVSISSADLMSRNLDRRVEALLPITNQTVHQQVLDQIMLANLLDNQQSWRVLASGASERVQPAEGEEPFNAHKYFMTNPSLSGRGKSSKKSSPRALSRRAQRS

Samples

Sample ID Description Type Environment
1 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
2 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
3 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
4 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
5 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
6 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
7 2643221733 Bosea sp. Root381 Isolate Unclassified
8 2643221734 Bosea sp. Root670 Isolate Unclassified
9 2643221736 Bosea sp. Root483D1 Isolate Unclassified
10 2738541281 Methylobacterium sp. GV094 Isolate Unclassified
11 2738543032 Methylobacterium sp. GV104 Isolate Unclassified
12 2773857925 Microvirga vignae BR3299 Isolate Unclassified
13 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
14 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
15 2841760612 Bosea sp. Tri-49 Isolate Nodule
16 2842698319 Methylobacterium sp. R-72139 Isolate Unclassified
17 2844104063 Bosea sp. Tri-39 Isolate Nodule
18 2851182111 Bosea sp. Tri-44 Isolate Nodule
19 2851246043 Bosea sp. Tri-54 Isolate Nodule
20 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
21 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
22 2884298095 Microvirga thermotolerans HR1 Isolate Rhizosphere
23 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
24 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
25 2902330777 Methylobacterium sp. 2A Isolate Unclassified
26 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
27 2909042592 Labrys sp. LIt4 Isolate Nodule
28 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
29 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
30 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
31 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
32 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
33 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified
34 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
35 3300000044 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - sample from Arabidopsis soil old Metagenome Rhizosphere
36 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
37 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
38 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
39 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
40 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
41 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
42 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
43 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
44 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
45 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
46 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
47 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
48 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
49 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
50 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
51 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
52 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
53 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
54 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
55 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
66 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
67 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
68 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
71 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
73 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
92 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
93 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
94 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
95 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
96 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
97 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
98 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
99 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
100 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
101 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
102 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
103 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
104 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
105 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
106 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
108 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
109 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
110 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
111 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
112 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
113 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
114 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
115 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
116 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
117 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
118 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
119 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
120 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
121 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
122 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
123 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
124 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
125 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
126 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
127 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
128 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
129 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
130 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
131 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
132 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
133 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
134 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
135 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
136 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
137 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
138 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
139 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
140 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
141 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
142 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
143 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
144 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
145 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
146 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
147 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
148 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
149 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
150 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
151 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
152 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
153 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
154 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
155 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
156 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
157 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
158 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
159 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
160 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
171 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
172 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
173 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
174 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
175 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
176 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
177 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
179 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
180 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
181 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
182 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
183 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
184 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
185 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
186 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
187 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
188 641522639 Methylobacterium sp. 4-46 Isolate Nodule
189 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
190 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified
191 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 82.14
Metatranscriptomes 0.45
Isolates 17.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.71
Nodule 5.36
Rhizoplane 6.25
Rhizosphere 65.62
Stem 0
Stem Tuber 0
Unclassified 12.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 ARSoilOldRDRAFT_c000099 3300000044 Bacteria 16454
2 JGI25151J46595_10000086 3300003187 Bacteria 126250
3 Ga0055526_1002950 3300003771 Bacteria 11155
4 Ga0055524_1000515 3300003775 Bacteria 29812
5 Ga0055536_1000874 3300003781 Bacteria 19576
6 Ga0055531_10010442 3300003794 Bacteria 4613
7 Ga0065165_1000393 3300005262 Bacteria 71081
8 Ga0070660_100015593 3300005339 Bacteria 5491
9 Ga0070674_100015523 3300005356 Bacteria 4755
10 Ga0070659_100003616 3300005366 Bacteria 11000
11 Ga0070709_10025594 3300005434 Bacteria 3488
12 Ga0070714_100036568 3300005435 Bacteria 4118
13 Ga0070663_100001658 3300005455 Bacteria 12315
14 Ga0070681_10005734 3300005458 Bacteria 12003
15 Ga0070679_100007335 3300005530 Bacteria 10301
16 Ga0070693_100025875 3300005547 Bacteria 3161
17 Ga0068856_100097558 3300005614 Bacteria 2928
18 Ga0068858_100014343 3300005842 Bacteria 7472
19 Ga0081538_10036880 3300005981 Bacteria 3182
20 Ga0081540_1011649 3300005983 Bacteria 5863
21 Ga0070712_100021306 3300006175 Bacteria 4256
22 Ga0105243_10009594 3300009148 Bacteria 7371
23 Ga0105241_10009810 3300009174 Bacteria 7036
24 Ga0105248_10019168 3300009177 Bacteria 7569
25 Ga0105237_10006119 3300009545 Bacteria 13453
26 Ga0105238_10012213 3300009551 Bacteria 8659
27 Ga0105238_10044764 3300009551 Bacteria 4473
28 Ga0157370_10055725 3300013104 Bacteria 3764
29 Ga0157370_10110197 3300013104 Bacteria 2573
30 Ga0157369_10108762 3300013105 Bacteria 2948
31 Ga0171462_1011 3300013250 Bacteria 229282
32 Ga0163163_10003341 3300014325 Bacteria 13617
33 Ga0206356_10653884 3300020070 Bacteria 3787
34 Ga0209233_1008142 3300025261 Bacteria 3269
35 Ga0209130_1000061 3300025284 Bacteria 200990
36 Ga0209675_1000514 3300025291 Bacteria 28599
37 Ga0209676_1000046 3300025292 Bacteria 409173
38 Ga0209676_1005587 3300025292 Bacteria 6497
39 Ga0209025_1000016 3300025294 Bacteria 770739
40 Ga0209025_1001935 3300025294 Bacteria 23940
41 Ga0209564_1000035 3300025295 Bacteria 442446
42 Ga0209758_1000252 3300025297 Bacteria 108214
43 Ga0209050_1004800 3300025298 Bacteria 8901
44 Ga0209256_1000025 3300025299 Bacteria 442449
45 Ga0209257_1000481 3300025304 Bacteria 72432
46 Ga0207682_10002991 3300025893 Bacteria 7414
47 Ga0207645_10020407 3300025907 Bacteria 4337
48 Ga0207707_10017300 3300025912 Bacteria 6284
49 Ga0207707_10027105 3300025912 Bacteria 5010
50 Ga0207660_10076538 3300025917 Bacteria 2447
51 Ga0207657_10024911 3300025919 Bacteria 5529
52 Ga0207652_10004498 3300025921 Bacteria 11328
53 Ga0207652_10047050 3300025921 Bacteria 3684
54 Ga0207690_10031945 3300025932 Bacteria 3374
55 Ga0207691_10006864 3300025940 Bacteria 10986
56 Ga0207667_10020243 3300025949 Bacteria 7404
57 Ga0207640_10047750 3300025981 Bacteria 2763
58 Ga0207639_10004351 3300026041 Bacteria 9555
59 Ga0207678_10000561 3300026067 Bacteria 33981
60 Ga0207641_10057579 3300026088 Bacteria 3306
61 Ga0207648_10022293 3300026089 Bacteria 5690
62 Ga0207683_10010046 3300026121 Bacteria 8077
63 Ga0209966_1000918 3300027695 Bacteria 5574
64 Ga0307513_10006077 3300031456 Bacteria 15845
65 Ga0265313_10000116 3300031595 Bacteria 80097
66 Ga0265314_10001754 3300031711 Bacteria 23419
67 Ga0265342_10000461 3300031712 Bacteria 44177
68 Ga0307510_10019837 3300033180 Bacteria 7874
69 Ga0373923_0000055 3300035111 Bacteria 17629
70 Ga0373956_0007661 3300035119 Bacteria 4351
71 Ga0373957_0001932 3300035120 Bacteria 5767
72 Ga0373943_0001550 3300035170 Bacteria 10416
73 Ga0373924_0000943 3300035410 Bacteria 9194
74 Ga0373935_0000045 3300035692 Bacteria 48915
75 Ga0373927_0045624 3300035695 Bacteria 2834
76 Ga0373947_0002901 3300035725 Bacteria 10241
77 Ga0373937_0000369 3300036401 Bacteria 41814
78 Ga0373925_0000178 3300037068 Bacteria 69362
79 Ga0373925_0017502 3300037068 Bacteria 5196
80 Ga0395900_0135706 3300037418 Bacteria 2521
81 Ga0436365_1324408 3300039437 Bacteria 4765
82 Ga0466957_0034890 3300044842 Bacteria 3017
83 Ga0466959_0049887 3300045049 Bacteria 3074
84 Ga0451576_0000122 3300045051 Bacteria 197797
85 Ga0466958_0008776 3300045836 Bacteria 5614
86 Ga0495592_0000118 3300046454 Bacteria 69831
87 Ga0495629_0006293 3300046459 Bacteria 8810
88 Ga0495651_0000150 3300046462 Bacteria 51171
89 Ga0495653_0000138 3300046463 Bacteria 60857
90 Ga0495653_0089228 3300046463 Bacteria 2260
91 Ga0495664_0000005 3300046477 Bacteria 439635
92 Ga0495608_0000083 3300046511 Bacteria 69238
93 Ga0495618_0000079 3300046514 Bacteria 69375
94 Ga0495628_0000033 3300046516 Bacteria 118203
95 Ga0495630_0000490 3300046517 Bacteria 29272
96 Ga0495652_0000001 3300046529 Bacteria 1045081
97 Ga0495652_0075958 3300046529 Bacteria 2788
98 Ga0495640_0000010 3300046533 Bacteria 214167
99 Ga0495587_0000090 3300046536 Bacteria 69871
100 Ga0495645_0000005 3300046543 Bacteria 443917
101 Ga0495633_0002322 3300046558 Bacteria 13541
102 Ga0495667_0000079 3300046559 Bacteria 69267
103 Ga0495634_0000166 3300046642 Bacteria 60485
104 Ga0495635_0000055 3300046663 Bacteria 69432
105 Ga0495635_0020410 3300046663 Bacteria 4616
106 Ga0495657_0000124 3300046675 Bacteria 69346
107 Ga0495599_0000075 3300046678 Bacteria 69327
108 Ga0495623_0000003 3300046679 Bacteria 147316
109 Ga0495646_0000042 3300046680 Bacteria 69329
110 Ga0495647_0016499 3300046681 Bacteria 2600
111 Ga0495658_0002790 3300046683 Bacteria 8776
112 Ga0495613_0008989 3300046689 Bacteria 7413
113 Ga0495649_0000279 3300046694 Bacteria 45005
114 Ga0495600_0000052 3300046809 Bacteria 69430
115 Ga0495600_0050839 3300046809 Bacteria 2705
116 Ga0495604_0000010 3300047317 Bacteria 312236
117 Ga0495674_0000013 3300047319 Bacteria 248475
118 Ga0495680_0000275 3300047322 Bacteria 57457
119 Ga0495675_0000297 3300047444 Bacteria 35718
120 Ga0495684_0000008 3300047471 Bacteria 201370
121 Ga0495602_0000134 3300048088 Bacteria 69349
122 Ga0496100_0001182 3300048903 Bacteria 12715
123 Ga0496101_0010061 3300048904 Bacteria 6235
124 Ga0496103_0001803 3300048906 Bacteria 13953
125 Ga0496103_0022550 3300048906 Bacteria 3792
126 Ga0496104_0024625 3300048907 Bacteria 5537
127 Ga0496106_0006203 3300048909 Bacteria 8842
128 Ga0496107_0006742 3300048910 Bacteria 7902
129 Ga0496109_0053871 3300048912 Bacteria 3670
130 Ga0496112_0012759 3300048915 Bacteria 7731
131 Ga0496112_0109750 3300048915 Bacteria 2729
132 Ga0496114_0016247 3300048917 Bacteria 5995
133 Ga0496115_0007410 3300048918 Bacteria 8071
134 Ga0496115_0026867 3300048918 Bacteria 4497
135 Ga0496115_0030651 3300048918 Bacteria 4233
136 Ga0496116_0018827 3300048919 Bacteria 5306
137 Ga0496117_0021744 3300048920 Bacteria 5176
138 Ga0496122_0018683 3300048925 Bacteria 6384
139 Ga0496123_0001897 3300048926 Bacteria 27276
140 Ga0496125_0015353 3300048928 Bacteria 7414
141 Ga0501032_0007058 3300049569 Bacteria 8238
142 Ga0501034_0000014 3300049571 Bacteria 297798
143 Ga0501034_0052591 3300049571 Bacteria 4103
144 Ga0501034_0071223 3300049571 Bacteria 3486
145 Ga0501034_0112734 3300049571 Bacteria 2709
146 Ga0501036_0001378 3300049572 Bacteria 18662
147 Ga0501037_0002427 3300049573 Bacteria 13473
148 Ga0501037_0010510 3300049573 Bacteria 6797
149 Ga0501038_0020234 3300049574 Bacteria 5987
150 Ga0501038_0073918 3300049574 Bacteria 2885
151 Ga0501039_0000289 3300049575 Bacteria 35699
152 Ga0501039_0009917 3300049575 Bacteria 7262
153 Ga0501043_0002048 3300049579 Bacteria 17205
154 Ga0501046_0000010 3300049580 Bacteria 331082
155 Ga0501046_0024492 3300049580 Bacteria 4950
156 Ga0501046_0030837 3300049580 Bacteria 4350
157 Ga0501047_0000291 3300049581 Bacteria 57615
158 Ga0501047_0000306 3300049581 Bacteria 56352
159 Ga0501047_0007634 3300049581 Bacteria 10184
160 Ga0501048_0001091 3300049582 Bacteria 20359
161 Ga0501048_0004688 3300049582 Bacteria 10408
162 Ga0501067_0006495 3300049583 Bacteria 6484
163 Ga0501070_0002955 3300049586 Bacteria 14801
164 Ga0501070_0005601 3300049586 Bacteria 10711
165 Ga0501073_0015083 3300049589 Bacteria 5606
166 Ga0501074_0012520 3300049590 Bacteria 6167
167 Ga0501074_0019038 3300049590 Bacteria 4986
168 Ga0501079_0008371 3300049741 Bacteria 7837
169 Ga0501080_0000268 3300049742 Bacteria 39347
170 Ga0501083_0001300 3300049744 Bacteria 16891
171 Ga0501035_0000034 3300049822 Bacteria 174589
172 Ga0501035_0027822 3300049822 Bacteria 5167
173 Ga0501044_0000039 3300049823 Bacteria 158218
174 Ga0501044_0003767 3300049823 Bacteria 17034
175 Ga0501044_0073683 3300049823 Bacteria 3470
176 nmdc:mga0k408_12608_c1 3300050493 Bacteria 4620
177 Ga0495601_0000003 3300053077 Bacteria 493642
178 Ga0495612_0000077 3300053078 Bacteria 44609
179 Ga0495595_0000094 3300053084 Bacteria 41985
180 Ga0495619_0000091 3300053085 Bacteria 69370
181 Ga0500651_0002118 3300053093 Bacteria 10328
182 Ga0500641_0000987 3300053096 Bacteria 10101
183 Ga0500616_0000006 3300053153 Bacteria 944738
184 Ga0500616_0025964 3300053153 Bacteria 3247
185 Ga0500645_000033 3300053730 Bacteria 119279

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046529 Ga0495652_0075958 Ga0495652_0075958_12_2033 657
2 3300048910 Ga0496107_0006742 Ga0496107_0006742_11_2068 667
3 3300033180 Ga0307510_10019837 Ga0307510_100198373 668
4 3300031456 Ga0307513_10006077 Ga0307513_100060776 670
5 3300035695 Ga0373927_0045624 Ga0373927_0045624_91_2157 671
6 3300046663 Ga0495635_0020410 Ga0495635_0020410_2447_4510 671
7 3300046681 Ga0495647_0016499 Ga0495647_0016499_25_2091 671
8 3300048915 Ga0496112_0109750 Ga0496112_0109750_588_2717 691
9 3300049580 Ga0501046_0000010 Ga0501046_0000010_103076_105256 691
10 3300035111 Ga0373923_0000055 Ga0373923_0000055_11888_14026 692
11 3300035119 Ga0373956_0007661 Ga0373956_0007661_1952_4090 692
12 3300035120 Ga0373957_0001932 Ga0373957_0001932_3013_5151 692
13 3300035170 Ga0373943_0001550 Ga0373943_0001550_2299_4437 692
14 3300035410 Ga0373924_0000943 Ga0373924_0000943_3592_5730 692
15 3300035692 Ga0373935_0000045 Ga0373935_0000045_16256_18394 692
16 3300035725 Ga0373947_0002901 Ga0373947_0002901_4872_7010 692
17 3300036401 Ga0373937_0000369 Ga0373937_0000369_9158_11296 692
18 3300037068 Ga0373925_0000178 Ga0373925_0000178_36703_38841 692
19 3300046454 Ga0495592_0000118 Ga0495592_0000118_30506_32644 692
20 3300046459 Ga0495629_0006293 Ga0495629_0006293_2858_4996 692
21 3300046462 Ga0495651_0000150 Ga0495651_0000150_22048_24186 692
22 3300046463 Ga0495653_0000138 Ga0495653_0000138_22045_24183 692
23 3300046477 Ga0495664_0000005 Ga0495664_0000005_30544_32682 692
24 3300046511 Ga0495608_0000083 Ga0495608_0000083_30546_32684 692
25 3300046514 Ga0495618_0000079 Ga0495618_0000079_30542_32680 692
26 3300046516 Ga0495628_0000033 Ga0495628_0000033_78878_81016 692
27 3300046517 Ga0495630_0000490 Ga0495630_0000490_2991_5129 692
28 3300046529 Ga0495652_0000001 Ga0495652_0000001_36703_38841 692
29 3300046533 Ga0495640_0000010 Ga0495640_0000010_36918_39056 692
30 3300046536 Ga0495587_0000090 Ga0495587_0000090_30546_32684 692
31 3300046543 Ga0495645_0000005 Ga0495645_0000005_30515_32653 692
32 3300046559 Ga0495667_0000079 Ga0495667_0000079_36703_38841 692
33 3300046642 Ga0495634_0000166 Ga0495634_0000166_27804_29942 692
34 3300046663 Ga0495635_0000055 Ga0495635_0000055_36771_38909 692
35 3300046675 Ga0495657_0000124 Ga0495657_0000124_36694_38832 692
36 3300046678 Ga0495599_0000075 Ga0495599_0000075_30515_32653 692
37 3300046679 Ga0495623_0000003 Ga0495623_0000003_78829_80967 692
38 3300046680 Ga0495646_0000042 Ga0495646_0000042_30517_32655 692
39 3300046689 Ga0495613_0008989 Ga0495613_0008989_3892_6030 692
40 3300046809 Ga0495600_0000052 Ga0495600_0000052_36778_38916 692
41 3300047317 Ga0495604_0000010 Ga0495604_0000010_273287_275425 692
42 3300047319 Ga0495674_0000013 Ga0495674_0000013_36703_38841 692
43 3300047322 Ga0495680_0000275 Ga0495680_0000275_30495_32633 692
44 3300047444 Ga0495675_0000297 Ga0495675_0000297_3049_5187 692
45 3300047471 Ga0495684_0000008 Ga0495684_0000008_36703_38841 692
46 3300048088 Ga0495602_0000134 Ga0495602_0000134_30524_32662 692
47 3300048907 Ga0496104_0024625 Ga0496104_0024625_3171_5369 692
48 3300048918 Ga0496115_0007410 Ga0496115_0007410_5577_7775 692
49 3300053077 Ga0495601_0000003 Ga0495601_0000003_36917_39055 692
50 3300053078 Ga0495612_0000077 Ga0495612_0000077_30530_32668 692
51 3300053084 Ga0495595_0000094 Ga0495595_0000094_30536_32674 692
52 3300053085 Ga0495619_0000091 Ga0495619_0000091_30530_32668 692
53 3300005434 Ga0070709_10025594 Ga0070709_100255942 693
54 3300005435 Ga0070714_100036568 Ga0070714_1000365682 693
55 3300006175 Ga0070712_100021306 Ga0070712_1000213061 693
56 3300020070 Ga0206356_10653884 Ga0206356_106538843 693
57 3300025917 Ga0207660_10076538 Ga0207660_100765382 693
58 3300025981 Ga0207640_10047750 Ga0207640_100477501 693
59 3300031595 Ga0265313_10000116 Ga0265313_1000011657 693
60 3300049571 Ga0501034_0052591 Ga0501034_0052591_1734_3884 693
61 3300048906 Ga0496103_0022550 Ga0496103_0022550_1599_3734 694
62 3300048912 Ga0496109_0053871 Ga0496109_0053871_1486_3621 694
63 3300048904 Ga0496101_0010061 Ga0496101_0010061_166_2373 695
64 3300046463 Ga0495653_0089228 Ga0495653_0089228_58_2202 698
65 iso_pu_bacteria 2919138771 2919142751 699
66 iso_pu_bacteria 2643221734 2644733116 701
67 iso_pu_bacteria 2643221736 2644746943 701
68 iso_pu_bacteria 2841760612 2841762318 701
69 iso_pu_bacteria 2844104063 2844109856 701
70 iso_pu_bacteria 2851182111 2851186885 701
71 iso_pu_bacteria 2851246043 2851248331 701
72 iso_pu_bacteria 2909042592 2909048210 701
73 iso_pu_bacteria 8054563764 8054566594 701
74 iso_pu_bacteria 8057529695 8057535527 701
75 iso_pu_bacteria 2643221733 2644729251 702
76 3300049822 Ga0501035_0027822 Ga0501035_0027822_1468_3636 704
77 3300005262 Ga0065165_1000393 Ga0065165_100039373 705
78 3300005339 Ga0070660_100015593 Ga0070660_1000155934 705
79 3300005366 Ga0070659_100003616 Ga0070659_1000036165 705
80 3300005455 Ga0070663_100001658 Ga0070663_1000016585 705
81 3300005458 Ga0070681_10005734 Ga0070681_100057345 705
82 3300005530 Ga0070679_100007335 Ga0070679_1000073354 705
83 3300005547 Ga0070693_100025875 Ga0070693_1000258752 705
84 3300005614 Ga0068856_100097558 Ga0068856_1000975582 705
85 3300009148 Ga0105243_10009594 Ga0105243_100095946 705
86 3300009174 Ga0105241_10009810 Ga0105241_100098105 705
87 3300009545 Ga0105237_10006119 Ga0105237_1000611910 705
88 3300009551 Ga0105238_10012213 Ga0105238_100122133 705
89 3300013104 Ga0157370_10110197 Ga0157370_101101972 705
90 3300013105 Ga0157369_10108762 Ga0157369_101087622 705
91 3300025284 Ga0209130_1000061 Ga0209130_100006174 705
92 3300025294 Ga0209025_1000016 Ga0209025_100001630 705
93 3300025294 Ga0209025_1001935 Ga0209025_10019354 705
94 3300025912 Ga0207707_10017300 Ga0207707_100173002 705
95 3300025919 Ga0207657_10024911 Ga0207657_100249114 705
96 3300025921 Ga0207652_10004498 Ga0207652_100044988 705
97 3300025932 Ga0207690_10031945 Ga0207690_100319452 705
98 3300025949 Ga0207667_10020243 Ga0207667_100202436 705
99 3300026041 Ga0207639_10004351 Ga0207639_100043514 705
100 3300026067 Ga0207678_10000561 Ga0207678_1000056118 705
101 3300048903 Ga0496100_0001182 Ga0496100_0001182_1527_3698 705
102 3300048906 Ga0496103_0001803 Ga0496103_0001803_6122_8293 705
103 3300048909 Ga0496106_0006203 Ga0496106_0006203_2201_4372 705
104 3300048917 Ga0496114_0016247 Ga0496114_0016247_2543_4714 705
105 3300048918 Ga0496115_0026867 Ga0496115_0026867_1377_3548 705
106 3300049569 Ga0501032_0007058 Ga0501032_0007058_2290_4461 705
107 3300049571 Ga0501034_0000014 Ga0501034_0000014_103607_105778 705
108 3300049573 Ga0501037_0002427 Ga0501037_0002427_5428_7599 705
109 3300049574 Ga0501038_0020234 Ga0501038_0020234_684_2855 705
110 3300049575 Ga0501039_0000289 Ga0501039_0000289_21131_23302 705
111 3300049580 Ga0501046_0030837 Ga0501046_0030837_1265_3436 705
112 3300049581 Ga0501047_0000291 Ga0501047_0000291_23315_25486 705
113 3300049581 Ga0501047_0007634 Ga0501047_0007634_4460_6631 705
114 3300049583 Ga0501067_0006495 Ga0501067_0006495_3383_5554 705
115 3300049586 Ga0501070_0002955 Ga0501070_0002955_6815_8986 705
116 3300049822 Ga0501035_0000034 Ga0501035_0000034_115119_117290 705
117 3300049823 Ga0501044_0000039 Ga0501044_0000039_112056_114227 705
118 3300053153 Ga0500616_0025964 Ga0500616_0025964_206_2377 705
119 3300045051 Ga0451576_0000122 Ga0451576_0000122_110377_112575 706
120 iso_pu_bacteria 2643221574 2643884874 706
121 iso_pu_bacteria 2643221663 2644352200 706
122 iso_pu_bacteria 2643221699 2644549748 706
123 iso_pu_bacteria 2928972540 2928975355 706
124 iso_pu_bacteria 2977240413 2977241657 706
125 3300049571 Ga0501034_0112734 Ga0501034_0112734_35_2245 707
126 3300031711 Ga0265314_10001754 Ga0265314_1000175413 708
127 3300037418 Ga0395900_0135706 Ga0395900_0135706_127_2322 708
128 iso_pu_bacteria 2941485952 2941487316 708
129 3300005983 Ga0081540_1011649 Ga0081540_10116494 709
130 3300049582 Ga0501048_0004688 Ga0501048_0004688_41_2248 709
131 3300013104 Ga0157370_10055725 Ga0157370_100557252 710
132 3300025912 Ga0207707_10027105 Ga0207707_100271052 710
133 3300025921 Ga0207652_10047050 Ga0207652_100470502 710
134 3300046558 Ga0495633_0002322 Ga0495633_0002322_8823_11039 710
135 3300046694 Ga0495649_0000279 Ga0495649_0000279_22122_24338 710
136 3300048926 Ga0496123_0001897 Ga0496123_0001897_9686_11902 710
137 3300049823 Ga0501044_0073683 Ga0501044_0073683_416_2635 710
138 3300003781 Ga0055536_1000874 Ga0055536_10008748 711
139 3300003794 Ga0055531_10010442 Ga0055531_100104423 711
140 3300005981 Ga0081538_10036880 Ga0081538_100368802 711
141 3300025292 Ga0209676_1000046 Ga0209676_1000046219 711
142 3300025292 Ga0209676_1005587 Ga0209676_10055876 711
143 3300025298 Ga0209050_1004800 Ga0209050_10048002 711
144 3300025304 Ga0209257_1000481 Ga0209257_100048114 711
145 3300048918 Ga0496115_0030651 Ga0496115_0030651_70_2295 711
146 3300053093 Ga0500651_0002118 Ga0500651_0002118_235_2460 711
147 3300053096 Ga0500641_0000987 Ga0500641_0000987_7076_9307 711
148 3300048919 Ga0496116_0018827 Ga0496116_0018827_2768_4999 712
149 3300048928 Ga0496125_0015353 Ga0496125_0015353_3446_5677 712
150 iso_pu_bacteria 2545555834 2545674966 712
151 iso_pu_bacteria 3003665799 3003667898 712
152 iso_pu_bacteria 641522639 641645294 712
153 iso_pu_bacteria 643348564 643603173 712
154 3300003187 JGI25151J46595_10000086 JGI25151J46595_10000086112 713
155 3300003771 Ga0055526_1002950 Ga0055526_10029507 713
156 3300003775 Ga0055524_1000515 Ga0055524_100051524 713
157 3300025291 Ga0209675_1000514 Ga0209675_100051410 713
158 3300025295 Ga0209564_1000035 Ga0209564_1000035438 713
159 3300025299 Ga0209256_1000025 Ga0209256_10000258 713
160 3300049580 Ga0501046_0024492 Ga0501046_0024492_2494_4770 713
161 iso_pu_bacteria 2917699015 2917700560 713
162 3300049571 Ga0501034_0071223 Ga0501034_0071223_674_2872 715
163 3300049572 Ga0501036_0001378 Ga0501036_0001378_5600_7798 715
164 3300049573 Ga0501037_0010510 Ga0501037_0010510_4575_6773 715
165 3300049574 Ga0501038_0073918 Ga0501038_0073918_631_2829 715
166 3300049575 Ga0501039_0009917 Ga0501039_0009917_1913_4111 715
167 3300049579 Ga0501043_0002048 Ga0501043_0002048_9417_11615 715
168 3300049581 Ga0501047_0000306 Ga0501047_0000306_36218_38416 715
169 3300049582 Ga0501048_0001091 Ga0501048_0001091_12565_14763 715
170 3300049586 Ga0501070_0005601 Ga0501070_0005601_5573_7771 715
171 3300049589 Ga0501073_0015083 Ga0501073_0015083_1699_3897 715
172 3300049590 Ga0501074_0012520 Ga0501074_0012520_3119_5317 715
173 3300049590 Ga0501074_0019038 Ga0501074_0019038_200_2398 715
174 3300049741 Ga0501079_0008371 Ga0501079_0008371_3178_5376 715
175 3300049742 Ga0501080_0000268 Ga0501080_0000268_10981_13179 715
176 3300049744 Ga0501083_0001300 Ga0501083_0001300_9094_11292 715
177 3300049823 Ga0501044_0003767 Ga0501044_0003767_9237_11435 715
178 iso_pu_bacteria 2902405164 2902410314 715
179 3300013250 Ga0171462_1011 Ga0171462_10117 717
180 3300031712 Ga0265342_10000461 Ga0265342_1000046115 718
181 3300048920 Ga0496117_0021744 Ga0496117_0021744_997_3234 718
182 3300048925 Ga0496122_0018683 Ga0496122_0018683_624_2861 718
183 3300005356 Ga0070674_100015523 Ga0070674_1000155234 719
184 3300025261 Ga0209233_1008142 Ga0209233_10081422 719
185 3300025893 Ga0207682_10002991 Ga0207682_100029914 719
186 3300025907 Ga0207645_10020407 Ga0207645_100204072 719
187 3300025940 Ga0207691_10006864 Ga0207691_100068647 719
188 3300026088 Ga0207641_10057579 Ga0207641_100575791 719
189 3300026089 Ga0207648_10022293 Ga0207648_100222933 719
190 3300026121 Ga0207683_10010046 Ga0207683_100100462 719
191 3300037068 Ga0373925_0017502 Ga0373925_0017502_902_3124 719
192 3300039437 Ga0436365_1324408 Ga0436365_1324408_1425_3665 719
193 3300046683 Ga0495658_0002790 Ga0495658_0002790_4770_6992 719
194 3300046809 Ga0495600_0050839 Ga0495600_0050839_115_2355 719
195 iso_pu_bacteria 2643221699 2644547328 720
196 3300053153 Ga0500616_0000006 Ga0500616_0000006_673380_675593 721
197 3300053730 Ga0500645_000033 Ga0500645_000033_20076_22289 721
198 iso_pu_bacteria 2595698237 2596371576 721
199 iso_pu_bacteria 2829745981 2829750931 721
200 iso_pu_bacteria 2861691609 2861692055 721
201 iso_pu_bacteria 2889306138 2889307288 721
202 iso_pu_bacteria 2928125067 2928127832 721
203 3300044842 Ga0466957_0034890 Ga0466957_0034890_643_2859 722
204 3300045049 Ga0466959_0049887 Ga0466959_0049887_200_2416 722
205 3300045836 Ga0466958_0008776 Ga0466958_0008776_2669_4885 722
206 iso_pu_bacteria 2884298095 2884299833 722
207 3300009551 Ga0105238_10044764 Ga0105238_100447643 723
208 iso_pu_bacteria 2508501114 2509078425 723
209 iso_pu_bacteria 2773857925 2774872619 723
210 iso_pu_bacteria 2835312727 2835315466 723
211 iso_pu_bacteria 2882456835 2882458217 723
212 iso_pu_bacteria 2894232714 2894239679 723
213 3300025297 Ga0209758_1000252 Ga0209758_1000252100 724
214 3300050493 nmdc:mga0k408_12608_c1 nmdc:mga0k408_12608_c1_850_3081 724
215 iso_pu_bacteria 2738541281 2738746745 726
216 iso_pu_bacteria 2738543032 2739355975 726
217 iso_pu_bacteria 2842698319 2842700230 726
218 iso_pu_bacteria 2902330777 2902332003 726
219 3300000044 ARSoilOldRDRAFT_c000099 ARSoilOldRDRAFT_0000999 727
220 3300005842 Ga0068858_100014343 Ga0068858_1000143432 727
221 3300009177 Ga0105248_10019168 Ga0105248_100191686 727
222 3300014325 Ga0163163_10003341 Ga0163163_100033418 727
223 3300027695 Ga0209966_1000918 Ga0209966_10009185 727
224 3300048915 Ga0496112_0012759 Ga0496112_0012759_4033_6264 727

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17941

PP_kinase_C_1

Polyphosphate kinase C-terminal domain 1

456

622

0.99

PF13089

PP_kinase_N

Polyphosphate kinase N-terminal domain

136

241

0.98

PF02503

PP_kinase

Polyphosphate kinase middle domain

249

429

0.96

PF13090

PP_kinase_C

Polyphosphate kinase C-terminal domain 2

628

806

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xdo-assembly1.cif.gz_A crystal structure of escherichia coli polyphosphate kinase 0.8482 41 700
2o8r-assembly1.cif.gz_A crystal structure of polyphosphate kinase from porphyromonas gingivalis 0.8317 41 700
2o8r-assembly1.cif.gz_A crystal structure of polyphosphate kinase from porphyromonas gingivalis 0.8166 41 700
1xdo-assembly1.cif.gz_A crystal structure of escherichia coli polyphosphate kinase 0.8161 41 700
2o8r-assembly1.cif.gz_B crystal structure of polyphosphate kinase from porphyromonas gingivalis 0.7879 45 700
ID Description Score Start End Superfamily
af_P9WHV9_55_158_1.20.58.310 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Polyphosphate kinase N-terminal domain 0.986 44 146 1.20.58.310
1xdoA04 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9748 516 694 3.30.870.10
af_P9WHV9_55_158_1.20.58.310 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Polyphosphate kinase N-terminal domain 0.9675 44 146 1.20.58.310
af_Q54BM7_872_1047_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9527 521 700 3.30.870.10
af_Q54BM7_872_1047_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9159 521 700 3.30.870.10
ID Description Score Start End GO Terms
AF-A0A355QWT1-F1-model_v4 deleted 0.9856 487 595
AF-A0A4S2RK11-F1-model_v4 RNA degradosome polyphosphate kinase 0.9798 489 656 GO:0006799
GO:0008976
GO:0009358
AF-G5SF29-F1-model_v4 Polyphosphate kinase 0.9792 520 612 GO:0006799
GO:0008976
GO:0009358
AF-A0A2M8PJT5-F1-model_v4 RNA degradosome polyphosphate kinase (EC 2.7.4.1) 0.9781 496 601 GO:0006799
GO:0008976
GO:0009358
AF-A0A538NXT3-F1-model_v4 RNA degradosome polyphosphate kinase (EC 2.7.4.1) 0.9764 497 698 GO:0006799
GO:0008976
GO:0009358

Feature Viewer

pLDDT pTM Quality
78.1 0.77 High
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Predicted Structure (AlphaFold2)

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