F336679

General Info

Members Datasets Scaffolds Average Seq Length
224 151 224 895

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10031656|Ga0105237_100316562
Length 983
Sequence VETRDTFPRPEPDRPDNDVTRRDFLVRAGLFGGALTLFPRTPSIVDGVVRQSAHAMRAGPTALAAPAGDLSPLFSGLQWRLLGPFRGGRTDAVTGVPGRPNEFYSGSVNGGLWKTIDAGRVWEPVFDANPVASIGAVAVAPSAPDTVYVGSGECTLRDSTGFGNGMYKSTDAGKTWTHIGLDATQHIGKVAVHPTDPNTVFVAAIGNFYGPNADRGVFRSTDGGRTWKKVLFKNDNVGAVDVVIDPTNPRVIYAGLWNTRRPPWFVYAPTNGPGGGLYKSTDGGDSWTELTNGLPKEGIGKSGIAVCPSNPQRLYAVIDDLVPDPSIPVDTSQAAVAARRFGVGVPGLGGFFRSDDAGATWTRLSNDSALWGRGWYFEHLAVDPKNADVVYVSNVSVSRSMDGGHTWVPLRGSPGGDDYHQPWVSPDDPNTMIVASDQGTVITRNAKAADPRDVTWSSWLNQPTAQIYHVSVDYRFPYWVTGAQQDSGAVAVRSRGKFGEISMRDWEPIGAGGESGYTAGDPLHPGIVFGGSGQRYDLALNAPVAGTTAPDVPKGETARADWTQPLVVSRADPRALYYGNQYLFRSMDCAQTWTRLSPDLTRPQPGVPPAMDAAAAADTGTNGQRGVIYTISPSPILVPMVWIGTDDGNIQVTMDNGAHWQNVTPPVLTAWSRVTTIEASHFDFNSAYASVDRHQLQDFEPYIYRTRDLGKTWQRITKGLPAGVYVHTVKEDPMRRGLLFAGTERGAFVSFDDGESWLPLKLNLPPTSVRDFEVYQNDLIVATHGRGFWVIDDITPLRAVEASLLASDAVLFKPSDAIYYNQGGDNGTPLQKDEPQAENPPNGASIDYFLKDTASGPVTLEIVDASGQVVHTFSSVASVDASTGEPGGRRRPGLPNTTALWRPAPVRLASSAGMHRVAWLPVKDVPRGGPGGGGFSRRRIPLLGGFTARLTVNGKTYTQPFTVKPDPRGLPGVEDEDDGHDDD

Samples

Sample ID Description Type Environment
1 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
2 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
39 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
62 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
101 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
102 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
103 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
104 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
105 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
106 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
107 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
108 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
109 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
110 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
111 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
112 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
113 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
114 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
115 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
116 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
117 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
119 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
120 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
121 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
122 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
123 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
124 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
125 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
126 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
127 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
128 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
129 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
130 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
131 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
132 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
133 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
134 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
135 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
136 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
137 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
138 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
139 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
140 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
141 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
142 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
143 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
144 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
145 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
148 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
149 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
150 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
151 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.68
Rhizosphere 97.32
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24748J21848_1000002 3300002074 Bacteria 426946
2 JGI24034J26672_10000004 3300002239 Bacteria 426946
3 Ga0070658_10025123 3300005327 Bacteria 4776
4 Ga0070683_100005688 3300005329 Bacteria 10411
5 Ga0070683_100008262 3300005329 Bacteria 8845
6 Ga0070670_100011287 3300005331 Bacteria 7635
7 Ga0070680_100002804 3300005336 Bacteria 12949
8 Ga0070682_100004209 3300005337 Bacteria 7983
9 Ga0068868_100010946 3300005338 Bacteria 6586
10 Ga0068868_100046889 3300005338 Bacteria 3383
11 Ga0070660_100004285 3300005339 Bacteria 9854
12 Ga0070687_100002908 3300005343 Bacteria 6562
13 Ga0070661_100001550 3300005344 Bacteria 15978
14 Ga0070668_100000363 3300005347 Bacteria 29920
15 Ga0070668_100015258 3300005347 Bacteria 5740
16 Ga0070669_100003477 3300005353 Bacteria 11350
17 Ga0070669_100014154 3300005353 Bacteria 5676
18 Ga0070673_100017250 3300005364 Bacteria 5127
19 Ga0070688_100030329 3300005365 Bacteria 3244
20 Ga0070714_100015685 3300005435 Bacteria 6100
21 Ga0070711_100001321 3300005439 Bacteria 13514
22 Ga0070694_100027807 3300005444 Bacteria 3676
23 Ga0070708_100000007 3300005445 Bacteria 146443
24 Ga0070708_100025969 3300005445 Bacteria 5009
25 Ga0070662_100007230 3300005457 Bacteria 7193
26 Ga0070681_10000215 3300005458 Bacteria 45218
27 Ga0070681_10002928 3300005458 Bacteria 15814
28 Ga0070681_10003000 3300005458 Bacteria 15667
29 Ga0070681_10003632 3300005458 Bacteria 14470
30 Ga0068867_100010218 3300005459 Bacteria 6621
31 Ga0070707_100031777 3300005468 Bacteria 5029
32 Ga0070698_100006176 3300005471 Bacteria 13047
33 Ga0070698_100073107 3300005471 Bacteria 3436
34 Ga0070699_100020272 3300005518 Bacteria 5732
35 Ga0070679_100000852 3300005530 Bacteria 26543
36 Ga0070679_100001766 3300005530 Bacteria 19484
37 Ga0070679_100009458 3300005530 Bacteria 9216
38 Ga0070679_100011658 3300005530 Bacteria 8377
39 Ga0070679_100057165 3300005530 Bacteria 3888
40 Ga0070684_100000468 3300005535 Bacteria 27549
41 Ga0070684_100006772 3300005535 Bacteria 8884
42 Ga0070684_100015003 3300005535 Bacteria 6293
43 Ga0070684_100031230 3300005535 Bacteria 4532
44 Ga0068853_100017273 3300005539 Bacteria 5955
45 Ga0068853_100066616 3300005539 Bacteria 3128
46 Ga0070696_100012767 3300005546 Bacteria 5640
47 Ga0070696_100020574 3300005546 Bacteria 4470
48 Ga0070693_100006994 3300005547 Bacteria 5494
49 Ga0068855_100051925 3300005563 Bacteria 4828
50 Ga0070664_100000163 3300005564 Bacteria 45912
51 Ga0070664_100025067 3300005564 Bacteria 4941
52 Ga0068854_100026283 3300005578 Bacteria 4000
53 Ga0068859_100011561 3300005617 Bacteria 8875
54 Ga0068861_100023462 3300005719 Bacteria 4450
55 Ga0068861_100027787 3300005719 Bacteria 4124
56 Ga0068858_100000067 3300005842 Bacteria 106455
57 Ga0081539_10003440 3300005985 Bacteria 19453
58 Ga0070716_100001678 3300006173 Bacteria 9991
59 Ga0070712_100013272 3300006175 Bacteria 5262
60 Ga0075431_100018487 3300006847 Bacteria 7099
61 Ga0075434_100003965 3300006871 Bacteria 13258
62 Ga0075434_100013701 3300006871 Bacteria 7729
63 Ga0075434_100038857 3300006871 Bacteria 4715
64 Ga0075434_100058284 3300006871 Bacteria 3838
65 Ga0075436_100000093 3300006914 Bacteria 52002
66 Ga0075436_100020206 3300006914 Bacteria 4571
67 Ga0097620_100011562 3300006931 Bacteria 8875
68 Ga0075435_100000461 3300007076 Bacteria 24879
69 Ga0075435_100001008 3300007076 Bacteria 17848
70 Ga0105240_10001407 3300009093 Bacteria 41286
71 Ga0105240_10011171 3300009093 Bacteria 12534
72 Ga0105240_10013597 3300009093 Bacteria 11167
73 Ga0111539_10033316 3300009094 Bacteria 6255
74 Ga0105245_10018694 3300009098 Bacteria 6063
75 Ga0105245_10027786 3300009098 Bacteria 4986
76 Ga0105247_10000005 3300009101 Bacteria 426989
77 Ga0114129_10004253 3300009147 Bacteria 20236
78 Ga0114129_10014454 3300009147 Bacteria 11248
79 Ga0114129_10052856 3300009147 Bacteria 5701
80 Ga0114129_10096438 3300009147 Bacteria 4094
81 Ga0114129_10103627 3300009147 Bacteria 3934
82 Ga0114129_10155475 3300009147 Bacteria 3128
83 Ga0105242_10063800 3300009176 Bacteria 3034
84 Ga0105237_10025215 3300009545 Bacteria 6082
85 Ga0105237_10031656 3300009545 Bacteria 5358
86 Ga0105238_10043148 3300009551 Bacteria 4564
87 Ga0105238_10066965 3300009551 Unclassified 3592
88 Ga0105249_10000214 3300009553 Bacteria 66514
89 Ga0105249_10004555 3300009553 Bacteria 11975
90 Ga0157373_10013065 3300013100 Bacteria 6093
91 Ga0157373_10024957 3300013100 Bacteria 4328
92 Ga0157370_10004112 3300013104 Bacteria 16859
93 Ga0157369_10007888 3300013105 Bacteria 12239
94 Ga0163162_10018338 3300013306 Bacteria 6855
95 Ga0163162_10028795 3300013306 Bacteria 5498
96 Ga0157372_10005323 3300013307 Bacteria 13668
97 Ga0157372_10008382 3300013307 Bacteria 10984
98 Ga0157372_10009419 3300013307 Bacteria 10391
99 Ga0157372_10021580 3300013307 Bacteria 6959
100 Ga0157372_10025909 3300013307 Bacteria 6378
101 Ga0157372_10031432 3300013307 Bacteria 5813
102 Ga0157372_10058429 3300013307 Bacteria 4311
103 Ga0157375_10045190 3300013308 Bacteria 4286
104 Ga0163163_10000294 3300014325 Bacteria 49809
105 Ga0157380_10010650 3300014326 Bacteria 6621
106 Ga0157380_10043179 3300014326 Bacteria 3528
107 Ga0157380_10055096 3300014326 Bacteria 3157
108 Ga0157377_10013412 3300014745 Bacteria 4147
109 Ga0157376_10032159 3300014969 Bacteria 4209
110 Ga0207672_1000108 3300025223 Bacteria 11430
111 Ga0207697_10003590 3300025315 Bacteria 7612
112 Ga0207710_10000004 3300025900 Bacteria 846540
113 Ga0207645_10000142 3300025907 Bacteria 55713
114 Ga0207707_10002016 3300025912 Bacteria 18437
115 Ga0207707_10019824 3300025912 Bacteria 5871
116 Ga0207695_10011606 3300025913 Bacteria 10654
117 Ga0207695_10057696 3300025913 Bacteria 4033
118 Ga0207671_10004584 3300025914 Bacteria 13129
119 Ga0207693_10004295 3300025915 Bacteria 12077
120 Ga0207663_10011492 3300025916 Bacteria 4753
121 Ga0207660_10001270 3300025917 Bacteria 16940
122 Ga0207660_10023228 3300025917 Bacteria 4187
123 Ga0207662_10013532 3300025918 Bacteria 4563
124 Ga0207662_10015046 3300025918 Bacteria 4346
125 Ga0207657_10023965 3300025919 Bacteria 5667
126 Ga0207649_10011911 3300025920 Bacteria 4810
127 Ga0207652_10007480 3300025921 Bacteria 8800
128 Ga0207652_10016099 3300025921 Bacteria 6098
129 Ga0207694_10021366 3300025924 Bacteria 4904
130 Ga0207687_10039051 3300025927 Bacteria 3248
131 Ga0207700_10018685 3300025928 Bacteria 4664
132 Ga0207690_10010460 3300025932 Bacteria 5516
133 Ga0207706_10001237 3300025933 Bacteria 25736
134 Ga0207665_10001118 3300025939 Bacteria 18002
135 Ga0207691_10000304 3300025940 Bacteria 48837
136 Ga0207691_10003227 3300025940 Bacteria 15907
137 Ga0207689_10000986 3300025942 Bacteria 27294
138 Ga0207689_10010126 3300025942 Bacteria 8127
139 Ga0207661_10000865 3300025944 Bacteria 19876
140 Ga0207661_10002510 3300025944 Bacteria 12623
141 Ga0207661_10006382 3300025944 Bacteria 8340
142 Ga0207661_10033930 3300025944 Bacteria 3964
143 Ga0207679_10005123 3300025945 Bacteria 8201
144 Ga0207712_10000213 3300025961 Bacteria 57883
145 Ga0207668_10009852 3300025972 Bacteria 5740
146 Ga0207640_10027922 3300025981 Bacteria 3443
147 Ga0207678_10008533 3300026067 Bacteria 9027
148 Ga0207708_10010527 3300026075 Bacteria 6865
149 Ga0207648_10004071 3300026089 Bacteria 15158
150 Ga0207676_10011284 3300026095 Bacteria 6384
151 Ga0207674_10001005 3300026116 Bacteria 36827
152 Ga0207674_10084283 3300026116 Unclassified 3176
153 Ga0207675_100002224 3300026118 Bacteria 19283
154 Ga0207675_100007319 3300026118 Bacteria 10432
155 Ga0207675_100049922 3300026118 Bacteria 3904
156 Ga0207698_10007177 3300026142 Bacteria 6978
157 Ga0268265_10025096 3300028380 Bacteria 4226
158 Ga0268264_10024853 3300028381 Bacteria 4894
159 Ga0268264_10073083 3300028381 Bacteria 2909
160 Ga0265332_10006659 3300031238 Bacteria 5232
161 Ga0265327_10011042 3300031251 Bacteria 6277
162 Ga0316575_10002243 3300031665 Bacteria 6454
163 Ga0307406_10018476 3300031901 Unclassified 4074
164 Ga0316583_10000073 3300032133 Bacteria 20918
165 Ga0373959_0001279 3300034820 Bacteria 4042
166 Ga0373938_0000075 3300034957 Bacteria 13216
167 Ga0373949_0000425 3300035090 Bacteria 14644
168 Ga0373952_0000767 3300035092 Bacteria 5771
169 Ga0373941_0000251 3300035115 Bacteria 10351
170 Ga0373956_0004220 3300035119 Bacteria 5767
171 Ga0373957_0004744 3300035120 Unclassified 4162
172 Ga0373960_0000399 3300035121 Bacteria 8461
173 Ga0373961_0000360 3300035241 Bacteria 19614
174 Ga0373962_0000318 3300035242 Bacteria 10447
175 Ga0373931_0001069 3300035691 Bacteria 11586
176 Ga0373935_0019341 3300035692 Bacteria 4153
177 Ga0373937_0000136 3300036401 Bacteria 71049
178 Ga0373937_0011297 3300036401 Bacteria 7832
179 Ga0373925_0005127 3300037068 Bacteria 9815
180 Ga0395905_0003765 3300037471 Bacteria 16069
181 Ga0451576_0006242 3300045051 Bacteria 14680
182 Ga0451576_0006590 3300045051 Bacteria 14199
183 Ga0495629_0009944 3300046459 Bacteria 6942
184 Ga0495629_0022770 3300046459 Bacteria 4465
185 Ga0495653_0010040 3300046463 Bacteria 7745
186 Ga0495582_0007572 3300046473 Bacteria 6005
187 Ga0495594_0004395 3300046499 Bacteria 7256
188 Ga0495630_0035815 3300046517 Bacteria 3709
189 Ga0495652_0009027 3300046529 Bacteria 9071
190 Ga0495587_0005540 3300046536 Bacteria 8239
191 Ga0495587_0034744 3300046536 Bacteria 3039
192 Ga0495645_0001077 3300046543 Bacteria 18523
193 Ga0495645_0026593 3300046543 Bacteria 4201
194 Ga0495658_0000105 3300046683 Bacteria 44276
195 Ga0495613_0012344 3300046689 Bacteria 6347
196 Ga0495613_0021780 3300046689 Bacteria 4776
197 Ga0495600_0001670 3300046809 Bacteria 12389
198 Ga0495581_0023423 3300047315 Bacteria 3578
199 Ga0495674_0035738 3300047319 Bacteria 4479
200 Ga0495680_0017251 3300047322 Bacteria 6171
201 Ga0495675_0002409 3300047444 Bacteria 11175
202 Ga0495684_0001902 3300047471 Bacteria 16749
203 Ga0495684_0056997 3300047471 Bacteria 2978
204 Ga0495602_0007886 3300048088 Bacteria 11128
205 Ga0495614_0002085 3300048089 Bacteria 8823
206 Ga0496109_0014782 3300048912 Bacteria 6792
207 Ga0496110_0006787 3300048913 Bacteria 9105
208 Ga0496112_0001736 3300048915 Bacteria 17065
209 Ga0496112_0002440 3300048915 Bacteria 14986
210 Ga0496112_0012971 3300048915 Bacteria 7680
211 Ga0496113_0060231 3300048916 Bacteria 2861
212 Ga0501227_000241 3300049665 Bacteria 11142
213 Ga0501225_0000361 3300049705 Bacteria 14298
214 Ga0501226_000178 3300049853 Bacteria 10576
215 nmdc:mga05p37_112494_c1 3300050507 Bacteria 3348
216 nmdc:mga05p37_41547_c1 3300050507 Bacteria 5645
217 nmdc:mga09592_39285_c1 3300050508 Bacteria 3974
218 nmdc:mga0n895_5422_c1 3300050512 Bacteria 10656
219 nmdc:mga0n895_59055_c1 3300050512 Unclassified 3785
220 nmdc:mga0rr50_1844_c1 3300050513 Bacteria 11733
221 nmdc:mga08x19_27_c1 3300050514 Bacteria 226652
222 nmdc:mga08x19_2940_c1 3300050514 Bacteria 10247
223 nmdc:mga08x19_9028_c1 3300050514 Bacteria 5952
224 nmdc:mga0a205_41191_c1 3300050515 Bacteria 4448

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300028381 Ga0268264_10073083 Ga0268264_100730832 727
2 3300047322 Ga0495680_0017251 Ga0495680_0017251_3620_6133 735
3 3300047471 Ga0495684_0001902 Ga0495684_0001902_14196_16709 735
4 3300009147 Ga0114129_10096438 Ga0114129_100964382 760
5 3300031901 Ga0307406_10018476 Ga0307406_100184762 783
6 3300048915 Ga0496112_0012971 Ga0496112_0012971_1222_3876 783
7 3300048916 Ga0496113_0060231 Ga0496113_0060231_176_2830 783
8 3300049665 Ga0501227_000241 Ga0501227_000241_4514_7189 783
9 3300049705 Ga0501225_0000361 Ga0501225_0000361_6972_9647 783
10 3300049853 Ga0501226_000178 Ga0501226_000178_4513_7188 783
11 3300009147 Ga0114129_10004253 Ga0114129_1000425314 790
12 3300009545 Ga0105237_10025215 Ga0105237_100252153 790
13 3300025914 Ga0207671_10004584 Ga0207671_100045843 790
14 3300005339 Ga0070660_100004285 Ga0070660_1000042855 801
15 3300005563 Ga0068855_100051925 Ga0068855_1000519252 801
16 3300005985 Ga0081539_10003440 Ga0081539_1000344017 801
17 3300005445 Ga0070708_100025969 Ga0070708_1000259693 804
18 3300013105 Ga0157369_10007888 Ga0157369_100078882 808
19 3300037068 Ga0373925_0005127 Ga0373925_0005127_5065_7764 809
20 3300025918 Ga0207662_10013532 Ga0207662_100135322 811
21 3300005471 Ga0070698_100006176 Ga0070698_1000061764 813
22 3300009551 Ga0105238_10043148 Ga0105238_100431482 813
23 3300013307 Ga0157372_10008382 Ga0157372_100083822 813
24 3300026118 Ga0207675_100049922 Ga0207675_1000499221 813
25 3300035692 Ga0373935_0019341 Ga0373935_0019341_1442_4129 814
26 3300046689 Ga0495613_0012344 Ga0495613_0012344_3499_6186 814
27 3300048089 Ga0495614_0002085 Ga0495614_0002085_4129_6816 814
28 3300005444 Ga0070694_100027807 Ga0070694_1000278072 816
29 3300005719 Ga0068861_100023462 Ga0068861_1000234624 816
30 3300006847 Ga0075431_100018487 Ga0075431_1000184872 816
31 3300006871 Ga0075434_100003965 Ga0075434_1000039654 816
32 3300014326 Ga0157380_10010650 Ga0157380_100106502 816
33 3300026075 Ga0207708_10010527 Ga0207708_100105273 816
34 3300050508 nmdc:mga09592_39285_c1 nmdc:mga09592_39285_c1_38_2830 816
35 3300050515 nmdc:mga0a205_41191_c1 nmdc:mga0a205_41191_c1_1104_4145 816
36 3300046463 Ga0495653_0010040 Ga0495653_0010040_139_3054 817
37 3300005337 Ga0070682_100004209 Ga0070682_1000042092 818
38 3300050512 nmdc:mga0n895_59055_c1 nmdc:mga0n895_59055_c1_602_3433 819
39 3300006914 Ga0075436_100020206 Ga0075436_1000202062 822
40 3300014326 Ga0157380_10043179 Ga0157380_100431792 822
41 3300005539 Ga0068853_100066616 Ga0068853_1000666162 824
42 3300009147 Ga0114129_10103627 Ga0114129_101036272 824
43 3300013308 Ga0157375_10045190 Ga0157375_100451903 824
44 3300046459 Ga0495629_0022770 Ga0495629_0022770_94_2853 824
45 3300046543 Ga0495645_0026593 Ga0495645_0026593_300_3059 824
46 3300047319 Ga0495674_0035738 Ga0495674_0035738_131_2890 824
47 3300050512 nmdc:mga0n895_5422_c1 nmdc:mga0n895_5422_c1_1875_4733 824
48 3300005445 Ga0070708_100000007 Ga0070708_10000000758 826
49 3300005471 Ga0070698_100073107 Ga0070698_1000731071 826
50 3300013307 Ga0157372_10005323 Ga0157372_100053234 826
51 3300046689 Ga0495613_0021780 Ga0495613_0021780_87_2939 826
52 3300005546 Ga0070696_100012767 Ga0070696_1000127672 827
53 3300025932 Ga0207690_10010460 Ga0207690_100104603 827
54 3300005338 Ga0068868_100046889 Ga0068868_1000468891 828
55 3300005365 Ga0070688_100030329 Ga0070688_1000303291 828
56 3300009176 Ga0105242_10063800 Ga0105242_100638002 828
57 3300013306 Ga0163162_10028795 Ga0163162_100287953 828
58 3300014326 Ga0157380_10055096 Ga0157380_100550961 828
59 3300014969 Ga0157376_10032159 Ga0157376_100321592 828
60 3300025942 Ga0207689_10000986 Ga0207689_100009863 828
61 3300046459 Ga0495629_0009944 Ga0495629_0009944_3972_6842 828
62 3300046473 Ga0495582_0007572 Ga0495582_0007572_2589_5459 828
63 3300050514 nmdc:mga08x19_2940_c1 nmdc:mga08x19_2940_c1_7323_10139 828
64 3300013307 Ga0157372_10025909 Ga0157372_100259094 829
65 3300005329 Ga0070683_100008262 Ga0070683_1000082626 830
66 3300005459 Ga0068867_100010218 Ga0068867_1000102185 830
67 3300005535 Ga0070684_100015003 Ga0070684_1000150033 830
68 3300005719 Ga0068861_100027787 Ga0068861_1000277872 830
69 3300006871 Ga0075434_100013701 Ga0075434_1000137013 830
70 3300007076 Ga0075435_100000461 Ga0075435_10000046121 830
71 3300009553 Ga0105249_10004555 Ga0105249_100045558 830
72 3300025918 Ga0207662_10015046 Ga0207662_100150461 830
73 3300025940 Ga0207691_10000304 Ga0207691_1000030439 830
74 3300025944 Ga0207661_10006382 Ga0207661_100063822 830
75 3300026089 Ga0207648_10004071 Ga0207648_100040715 830
76 3300026118 Ga0207675_100007319 Ga0207675_1000073192 830
77 3300031238 Ga0265332_10006659 Ga0265332_100066592 830
78 3300031251 Ga0265327_10011042 Ga0265327_100110423 830
79 3300005617 Ga0068859_100011561 Ga0068859_1000115615 831
80 3300006931 Ga0097620_100011562 Ga0097620_1000115622 831
81 3300009098 Ga0105245_10018694 Ga0105245_100186944 831
82 3300014745 Ga0157377_10013412 Ga0157377_100134122 831
83 3300025921 Ga0207652_10016099 Ga0207652_100160994 831
84 3300005530 Ga0070679_100011658 Ga0070679_1000116584 832
85 3300005535 Ga0070684_100031230 Ga0070684_1000312302 832
86 3300005564 Ga0070664_100025067 Ga0070664_1000250673 832
87 3300009147 Ga0114129_10155475 Ga0114129_101554752 832
88 3300025945 Ga0207679_10005123 Ga0207679_100051234 832
89 3300026095 Ga0207676_10011284 Ga0207676_100112842 832
90 3300026116 Ga0207674_10001005 Ga0207674_1000100514 832
91 3300045051 Ga0451576_0006590 Ga0451576_0006590_2942_5788 832
92 3300048915 Ga0496112_0001736 Ga0496112_0001736_7370_10099 832
93 3300050507 nmdc:mga05p37_112494_c1 nmdc:mga05p37_112494_c1_256_3114 832
94 3300013100 Ga0157373_10024957 Ga0157373_100249572 833
95 3300025912 Ga0207707_10019824 Ga0207707_100198242 833
96 3300025944 Ga0207661_10002510 Ga0207661_1000251010 833
97 3300036401 Ga0373937_0000136 Ga0373937_0000136_57797_60712 833
98 3300005530 Ga0070679_100009458 Ga0070679_1000094585 834
99 3300025919 Ga0207657_10023965 Ga0207657_100239652 834
100 3300005353 Ga0070669_100003477 Ga0070669_1000034773 835
101 3300009094 Ga0111539_10033316 Ga0111539_100333161 835
102 3300025927 Ga0207687_10039051 Ga0207687_100390511 835
103 3300026116 Ga0207674_10084283 Ga0207674_100842831 835
104 3300028380 Ga0268265_10025096 Ga0268265_100250961 835
105 3300005546 Ga0070696_100020574 Ga0070696_1000205743 836
106 3300045051 Ga0451576_0006242 Ga0451576_0006242_5097_7874 836
107 3300005338 Ga0068868_100010946 Ga0068868_1000109462 837
108 3300005347 Ga0070668_100000363 Ga0070668_1000003637 837
109 3300005353 Ga0070669_100014154 Ga0070669_1000141544 837
110 3300005457 Ga0070662_100007230 Ga0070662_1000072304 837
111 3300013306 Ga0163162_10018338 Ga0163162_100183384 837
112 3300025907 Ga0207645_10000142 Ga0207645_1000014221 837
113 3300025933 Ga0207706_10001237 Ga0207706_100012376 837
114 3300025942 Ga0207689_10010126 Ga0207689_100101267 837
115 3300026118 Ga0207675_100002224 Ga0207675_10000222410 837
116 3300028381 Ga0268264_10024853 Ga0268264_100248533 837
117 3300035120 Ga0373957_0004744 Ga0373957_0004744_793_3615 837
118 3300036401 Ga0373937_0011297 Ga0373937_0011297_234_3056 837
119 3300046536 Ga0495587_0005540 Ga0495587_0005540_3009_5831 837
120 3300047471 Ga0495684_0056997 Ga0495684_0056997_46_2868 837
121 3300005343 Ga0070687_100002908 Ga0070687_1000029084 838
122 3300005364 Ga0070673_100017250 Ga0070673_1000172502 838
123 3300025940 Ga0207691_10003227 Ga0207691_100032274 838
124 3300026067 Ga0207678_10008533 Ga0207678_100085334 838
125 3300046543 Ga0495645_0001077 Ga0495645_0001077_2865_5819 838
126 3300025315 Ga0207697_10003590 Ga0207697_100035903 839
127 3300006175 Ga0070712_100013272 Ga0070712_1000132723 840
128 3300025928 Ga0207700_10018685 Ga0207700_100186853 840
129 3300009098 Ga0105245_10027786 Ga0105245_100277862 841
130 3300005458 Ga0070681_10000215 Ga0070681_1000021526 843
131 3300005530 Ga0070679_100000852 Ga0070679_10000085211 843
132 3300037471 Ga0395905_0003765 Ga0395905_0003765_196_3015 843
133 3300046536 Ga0495587_0034744 Ga0495587_0034744_137_2986 843
134 3300005331 Ga0070670_100011287 Ga0070670_1000112873 844
135 3300005468 Ga0070707_100031777 Ga0070707_1000317772 844
136 3300005535 Ga0070684_100000468 Ga0070684_1000004685 844
137 3300005564 Ga0070664_100000163 Ga0070664_10000016325 844
138 3300046517 Ga0495630_0035815 Ga0495630_0035815_702_3605 844
139 3300046529 Ga0495652_0009027 Ga0495652_0009027_680_3583 844
140 3300046809 Ga0495600_0001670 Ga0495600_0001670_900_3803 844
141 3300047315 Ga0495581_0023423 Ga0495581_0023423_203_3106 844
142 3300047444 Ga0495675_0002409 Ga0495675_0002409_6706_9609 844
143 3300048088 Ga0495602_0007886 Ga0495602_0007886_1781_4684 844
144 3300048912 Ga0496109_0014782 Ga0496109_0014782_2774_5644 844
145 3300048913 Ga0496110_0006787 Ga0496110_0006787_1163_4033 844
146 3300048915 Ga0496112_0002440 Ga0496112_0002440_11708_14578 844
147 3300006871 Ga0075434_100038857 Ga0075434_1000388573 845
148 3300009147 Ga0114129_10052856 Ga0114129_100528566 845
149 3300014325 Ga0163163_10000294 Ga0163163_1000029414 845
150 3300050507 nmdc:mga05p37_41547_c1 nmdc:mga05p37_41547_c1_2642_5473 845
151 3300005336 Ga0070680_100002804 Ga0070680_10000280413 846
152 3300005347 Ga0070668_100015258 Ga0070668_1000152581 846
153 3300005458 Ga0070681_10003000 Ga0070681_100030004 846
154 3300005530 Ga0070679_100001766 Ga0070679_10000176614 846
155 3300009553 Ga0105249_10000214 Ga0105249_1000021420 846
156 3300025917 Ga0207660_10001270 Ga0207660_100012704 846
157 3300025961 Ga0207712_10000213 Ga0207712_1000021334 846
158 3300025972 Ga0207668_10009852 Ga0207668_100098521 846
159 3300032133 Ga0316583_10000073 Ga0316583_1000007315 847
160 3300034820 Ga0373959_0001279 Ga0373959_0001279_1182_3995 847
161 3300034957 Ga0373938_0000075 Ga0373938_0000075_4471_7284 847
162 3300035090 Ga0373949_0000425 Ga0373949_0000425_9013_11826 847
163 3300035092 Ga0373952_0000767 Ga0373952_0000767_2169_4982 847
164 3300035115 Ga0373941_0000251 Ga0373941_0000251_2024_4837 847
165 3300035119 Ga0373956_0004220 Ga0373956_0004220_2419_5322 847
166 3300035121 Ga0373960_0000399 Ga0373960_0000399_1942_4755 847
167 3300035241 Ga0373961_0000360 Ga0373961_0000360_5927_8740 847
168 3300035242 Ga0373962_0000318 Ga0373962_0000318_3235_6048 847
169 3300035691 Ga0373931_0001069 Ga0373931_0001069_4146_6959 847
170 3300005439 Ga0070711_100001321 Ga0070711_1000013218 848
171 3300006173 Ga0070716_100001678 Ga0070716_1000016785 848
172 3300025916 Ga0207663_10011492 Ga0207663_100114923 848
173 3300025939 Ga0207665_10001118 Ga0207665_100011186 848
174 3300025915 Ga0207693_10004295 Ga0207693_1000429511 849
175 3300046683 Ga0495658_0000105 Ga0495658_0000105_37163_40012 849
176 3300005327 Ga0070658_10025123 Ga0070658_100251232 851
177 3300005329 Ga0070683_100005688 Ga0070683_1000056881 851
178 3300005535 Ga0070684_100006772 Ga0070684_1000067723 851
179 3300006871 Ga0075434_100058284 Ga0075434_1000582842 851
180 3300025921 Ga0207652_10007480 Ga0207652_100074803 851
181 3300025944 Ga0207661_10000865 Ga0207661_100008654 851
182 3300046499 Ga0495594_0004395 Ga0495594_0004395_583_3492 853
183 3300005344 Ga0070661_100001550 Ga0070661_1000015501 855
184 3300005435 Ga0070714_100015685 Ga0070714_1000156852 855
185 3300005539 Ga0068853_100017273 Ga0068853_1000172732 855
186 3300005578 Ga0068854_100026283 Ga0068854_1000262832 855
187 3300009093 Ga0105240_10013597 Ga0105240_100135978 855
188 3300013307 Ga0157372_10058429 Ga0157372_100584292 855
189 3300025920 Ga0207649_10011911 Ga0207649_100119112 855
190 3300025981 Ga0207640_10027922 Ga0207640_100279222 855
191 3300026142 Ga0207698_10007177 Ga0207698_100071772 855
192 3300031665 Ga0316575_10002243 Ga0316575_100022433 856
193 3300005458 Ga0070681_10002928 Ga0070681_1000292812 857
194 3300005530 Ga0070679_100057165 Ga0070679_1000571653 857
195 3300005547 Ga0070693_100006994 Ga0070693_1000069943 857
196 3300050513 nmdc:mga0rr50_1844_c1 nmdc:mga0rr50_1844_c1_7436_10123 859
197 3300050514 nmdc:mga08x19_27_c1 nmdc:mga08x19_27_c1_197998_200685 859
198 3300013100 Ga0157373_10013065 Ga0157373_100130654 861
199 3300025913 Ga0207695_10011606 Ga0207695_100116061 861
200 3300005458 Ga0070681_10003632 Ga0070681_100036325 862
201 3300005518 Ga0070699_100020272 Ga0070699_1000202723 862
202 3300009093 Ga0105240_10001407 Ga0105240_1000140720 862
203 3300009093 Ga0105240_10011171 Ga0105240_100111714 862
204 3300009545 Ga0105237_10031656 Ga0105237_100316562 862
205 3300009551 Ga0105238_10066965 Ga0105238_100669652 862
206 3300013104 Ga0157370_10004112 Ga0157370_100041128 862
207 3300013307 Ga0157372_10009419 Ga0157372_100094197 862
208 3300013307 Ga0157372_10021580 Ga0157372_100215802 862
209 3300013307 Ga0157372_10031432 Ga0157372_100314323 862
210 3300025912 Ga0207707_10002016 Ga0207707_100020168 862
211 3300025913 Ga0207695_10057696 Ga0207695_100576961 862
212 3300025917 Ga0207660_10023228 Ga0207660_100232282 862
213 3300025924 Ga0207694_10021366 Ga0207694_100213662 862
214 3300025944 Ga0207661_10033930 Ga0207661_100339302 862
215 3300050514 nmdc:mga08x19_9028_c1 nmdc:mga08x19_9028_c1_1475_4420 862
216 3300006914 Ga0075436_100000093 Ga0075436_1000000936 871
217 3300007076 Ga0075435_100001008 Ga0075435_10000100815 871
218 3300009147 Ga0114129_10014454 Ga0114129_100144543 871
219 3300002074 JGI24748J21848_1000002 JGI24748J21848_1000002236 883
220 3300002239 JGI24034J26672_10000004 JGI24034J26672_10000004138 883
221 3300005842 Ga0068858_100000067 Ga0068858_1000000674 883
222 3300009101 Ga0105247_10000005 Ga0105247_10000005132 883
223 3300025223 Ga0207672_1000108 Ga0207672_10001087 883
224 3300025900 Ga0207710_10000004 Ga0207710_10000004131 883

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF15902

Sortilin-Vps10

Sortilin, neurotensin receptor 3,

110

242

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
6qtx-assembly1.cif.gz_A crystal structure of an arabidopsis wd40 domain in complex with a flowering transcription factor homolog 0.7649 501 718
6g6q-assembly2.cif.gz_D crystal structure of the computationally designed ika4 protein 0.744 563 725
5mqf-assembly1.cif.gz_E cryo-em structure of a human spliceosome activated for step 2 of splicing (c* complex) 0.7404 500 725
5igo-assembly4.cif.gz_D wd40 domain of arabidopsis thaliana e3 ubiquitin ligase cop1 in complex with peptide from trib1 0.7304 501 718
4aow-assembly2.cif.gz_B crystal structure of the human rack1 protein at a resolution of 2.45 angstrom 0.7275 449 718
ID Description Score Start End Superfamily
af_Q19433_523_701_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8206 563 725 2.130.10.10
af_A0A1D8PLA3_202_370_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.815 562 626 2.130.10.10
af_M0R6L2_498_673_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8136 563 725 2.130.10.10
af_A4HXS2_459_620_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8133 501 678 2.130.10.10
af_A0A486WY88_452_680_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.801 563 719 2.130.10.10
ID Description Score Start End GO Terms
AF-A0A5S3YNP6-F1-model_v4 Glycosyl hydrolase 0.985 125 220 GO:0016787
AF-X1T2R2-F1-model_v4 Sortilin N-terminal domain-containing protein 0.9835 73 204
AF-A0A2V9FVU0-F1-model_v4 Sortilin N-terminal domain-containing protein 0.981 85 226 GO:0000272
GO:0016798
AF-A0A7X6AHD2-F1-model_v4 deleted 0.9802 143 221
AF-A0A2V7MI61-F1-model_v4 Glycosyl hydrolase 0.9791 653 734

Feature Viewer

pLDDT pTM Quality
83.77 0.88 High
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Predicted Structure (AlphaFold2)

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