F335651

General Info

Members Datasets Scaffolds Average Seq Length
223 160 200 514

Family's Representative Sequence

Representative Sequence 3300025297|Ga0209758_1007751|Ga0209758_10077514
Length 559
Sequence MTVQSARLSQPDKFRIYGQFQQYFNCEIDIYKINPNLGTIIHVIMKKLICAIGLLSTTLYAAGQSGDATLTIQQNNSGLTISRHIYGHFSEHLGRCIYDGFWVDEHLPVQKKGRIRLDVVEALRKVKIPNLRWPGGCFADEYHWRDGIGPREQRPKMVNTNWGGVTEDNSFGTHEFLELCSLLNCEPYISANVGSGTVEEMSKWIEYLNFNGESPMSKIRKENGRQEPWNVHFWGVGNESWGCGGSMTADFYADQFRRYATYARNYPGAPLKKIACGPNSDDYKWTETAMKNIPLNQMWGLSLHYYTVPKTWQDKGSATSFTEQEYFTTMKHCLHMEELVSRHSAIMDHYDPEKKVALAVDEWGIWTNVEPGTNPGFLYQQNSLRDALVAATTLNIFNNHCDRVRLANLAQTVNVLQSLILTQKEKMLLTPTYHVFDLFKVHQDAKFLPILLNSPSYAVGNEQIPAVNASASVDSNNVIHVSLVNLDAAKTVNVSAVISNLPWKSVDGQVLSSAKVTDVNTFEAPNTVQIAKFSGAKKNGNNLSVSLPPHSVVVLELKN

Samples

Sample ID Description Type Environment
1 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
2 2738541302 Pedobacter sp. CF074 Isolate Unclassified
3 2739367651 Pedobacter sp. OK291 Isolate Unclassified
4 2818991437 Pedobacter terrae 518 Isolate Unclassified
5 2818991444 Filimonas endophytica 3197 Isolate Unclassified
6 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
7 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
8 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
9 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
10 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
11 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
12 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
13 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
14 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
15 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
16 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
17 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
18 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
19 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
20 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
21 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
22 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
23 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
24 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
25 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
26 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
27 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
28 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
29 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
30 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
31 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
32 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
33 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
34 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
35 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
36 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
37 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
38 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
39 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
40 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
41 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
42 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
43 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
44 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
45 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
46 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
47 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
48 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
49 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
50 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
51 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
52 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
53 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
54 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
55 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
56 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
57 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
58 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
60 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
61 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
64 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
65 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
66 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
67 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
68 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
69 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
70 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
71 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
72 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
73 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
74 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
75 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
76 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
77 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
78 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
79 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
80 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
81 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
82 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
83 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
85 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
86 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
88 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
89 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
91 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
92 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
94 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
95 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
97 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
119 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
120 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
121 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
122 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
123 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
124 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
125 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
126 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
127 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
128 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
129 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
130 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
131 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
132 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
133 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
134 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
135 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
136 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
137 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
138 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
139 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
140 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
141 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
142 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
143 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
144 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
145 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
146 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
147 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
148 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
149 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
151 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
152 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
153 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
154 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
155 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
156 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
157 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
158 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
159 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
160 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 89.24
Metatranscriptomes 0.45
Isolates 10.31

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.28
Nodule 0
Rhizoplane 0.45
Rhizosphere 65.47
Stem 0
Stem Tuber 0
Unclassified 14.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10001420 3300001989 Bacteria 9018
2 JGI24737J22298_10000564 3300001990 Bacteria 12998
3 JGI24735J21928_10000002 3300002067 Bacteria 624895
4 JGI25162J39368_1000024 3300002737 Bacteria 229507
5 JGI25162J39368_1000624 3300002737 Bacteria 25248
6 JGI25154J39366_1000028 3300002738 Bacteria 195818
7 JGI25157J39369_1003002 3300002741 Bacteria 3697
8 JGI25153J46596_10003799 3300003215 Bacteria 8331
9 rootH1_10022426 3300003316 Bacteria 12137
10 rootL2_10096496 3300003322 Bacteria 5083
11 rootH1_10014018 3300003323 Bacteria 16925
12 JGI25160J50197_1005555 3300003354 Bacteria 5230
13 Ga0055536_1000007 3300003781 Bacteria 345133
14 Ga0055528_1000029 3300003790 Bacteria 122126
15 Ga0055530_10000551 3300003791 Bacteria 32460
16 Ga0055530_10002497 3300003791 Bacteria 11775
17 Ga0055531_10000516 3300003794 Bacteria 34880
18 Ga0058862_10180500 3300004803 Bacteria 3975
19 Ga0065165_1000052 3300005262 Bacteria 192010
20 Ga0065714_10002188 3300005288 Bacteria 166479
21 Ga0065714_10007618 3300005288 Bacteria 3420
22 Ga0065714_10024781 3300005288 Bacteria 1707
23 Ga0070658_10000113 3300005327 Bacteria 72221
24 Ga0070676_10000430 3300005328 Bacteria 19880
25 Ga0070683_100005004 3300005329 Bacteria 10998
26 Ga0068869_100006032 3300005334 Bacteria 7665
27 Ga0070680_100024408 3300005336 Bacteria 4830
28 Ga0070668_100067006 3300005347 Bacteria 2788
29 Ga0070673_100000361 3300005364 Bacteria 23757
30 Ga0070659_100000417 3300005366 Bacteria 32306
31 Ga0070678_100011677 3300005456 Bacteria 5430
32 Ga0068867_100000725 3300005459 Bacteria 22054
33 Ga0070684_100061102 3300005535 Bacteria 3297
34 Ga0068853_100002099 3300005539 Bacteria 14786
35 Ga0068853_100018679 3300005539 Bacteria 5741
36 Ga0068855_100000033 3300005563 Bacteria 167299
37 Ga0068855_100013686 3300005563 Bacteria 9784
38 Ga0068855_100030333 3300005563 Bacteria 6468
39 Ga0068855_100164669 3300005563 Bacteria 2514
40 Ga0068856_100001524 3300005614 Bacteria 24300
41 Ga0068852_100001570 3300005616 Bacteria 15506
42 Ga0068866_10017905 3300005718 Bacteria 3195
43 Ga0068851_10072338 3300005834 Bacteria 1786
44 Ga0075366_10000806 3300006195 Bacteria 15007
45 Ga0075366_10003776 3300006195 Bacteria 8052
46 Ga0075366_10022585 3300006195 Bacteria 3661
47 Ga0075366_10022801 3300006195 Bacteria 3645
48 Ga0097621_100000076 3300006237 Bacteria 51192
49 Ga0068871_100000070 3300006358 Bacteria 57286
50 Ga0075428_100026809 3300006844 Bacteria 6380
51 Ga0068865_100000763 3300006881 Bacteria 18076
52 Ga0111539_10008980 3300009094 Bacteria 12654
53 Ga0105241_10013999 3300009174 Bacteria 5880
54 Ga0105237_10000709 3300009545 Bacteria 46102
55 Ga0105237_10001498 3300009545 Bacteria 30756
56 Ga0105237_10002998 3300009545 Bacteria 20402
57 Ga0105237_10003790 3300009545 Bacteria 17773
58 Ga0105237_10011187 3300009545 Bacteria 9510
59 Ga0105237_10017414 3300009545 Bacteria 7449
60 Ga0105238_10001588 3300009551 Bacteria 22750
61 Ga0105249_10037198 3300009553 Bacteria 4417
62 Ga0105239_10000040 3300010375 Bacteria 201445
63 Ga0105239_10000062 3300010375 Bacteria 153782
64 Ga0105239_10009182 3300010375 Bacteria 11181
65 Ga0105239_10011314 3300010375 Bacteria 9957
66 Ga0105239_10095888 3300010375 Bacteria 3277
67 Ga0105239_10251794 3300010375 Bacteria 1984
68 Ga0105246_10128315 3300011119 Bacteria 1890
69 Ga0157373_10000310 3300013100 Bacteria 39441
70 Ga0157371_10000051 3300013102 Bacteria 180272
71 Ga0157371_10001828 3300013102 Bacteria 21446
72 Ga0157371_10057148 3300013102 Bacteria 2767
73 Ga0157370_10042464 3300013104 Bacteria 4382
74 Ga0157370_10076129 3300013104 Bacteria 3162
75 Ga0157370_10095347 3300013104 Bacteria 2792
76 Ga0157369_10000033 3300013105 Bacteria 201124
77 Ga0157374_10000147 3300013296 Bacteria 63762
78 Ga0157374_10064777 3300013296 Bacteria 3431
79 Ga0157378_10037912 3300013297 Bacteria 4272
80 Ga0163162_10000054 3300013306 Bacteria 110125
81 Ga0163162_10008463 3300013306 Bacteria 10038
82 Ga0163162_10121595 3300013306 Bacteria 2715
83 Ga0157372_10005486 3300013307 Bacteria 13478
84 Ga0157375_10004525 3300013308 Bacteria 12082
85 Ga0182008_10000326 3300014497 Bacteria 37611
86 Ga0182006_1000068 3300015261 Bacteria 144823
87 Ga0182006_1000988 3300015261 Bacteria 18668
88 Ga0182006_1012031 3300015261 Bacteria 3790
89 Ga0182007_10000015 3300015262 Bacteria 207893
90 Ga0183373_1005 3300015682 Bacteria 351562
91 Ga0213872_10013338 3300021361 Bacteria 3853
92 Ga0209563_103316 3300025230 Bacteria 3364
93 Ga0207427_100066 3300025231 Bacteria 165770
94 Ga0209437_100010 3300025233 Bacteria 838447
95 Ga0209437_100017 3300025233 Bacteria 694471
96 Ga0209258_100068 3300025242 Bacteria 286288
97 Ga0209646_1000006 3300025246 Bacteria 694084
98 Ga0209026_1000432 3300025250 Bacteria 34957
99 Ga0209026_1001025 3300025250 Bacteria 13732
100 Ga0209026_1001301 3300025250 Bacteria 11289
101 Ga0209148_1000182 3300025254 Bacteria 123558
102 Ga0209233_1000017 3300025261 Bacteria 898076
103 Ga0209673_1000993 3300025273 Bacteria 34627
104 Ga0209676_1000058 3300025292 Bacteria 345185
105 Ga0209564_1009241 3300025295 Bacteria 4722
106 Ga0209564_1009680 3300025295 Bacteria 4547
107 Ga0209758_1007751 3300025297 Bacteria 7191
108 Ga0209050_1000054 3300025298 Bacteria 345186
109 Ga0209050_1000259 3300025298 Bacteria 113475
110 Ga0209050_1001434 3300025298 Bacteria 25653
111 Ga0207426_1000209 3300025302 Bacteria 139524
112 Ga0207426_1000678 3300025302 Bacteria 41242
113 Ga0209257_1000001 3300025304 Bacteria 2274655
114 Ga0209257_1007777 3300025304 Bacteria 6362
115 Ga0207645_10000300 3300025907 Bacteria 41495
116 Ga0207705_10000160 3300025909 Bacteria 72235
117 Ga0207654_10011559 3300025911 Bacteria 4504
118 Ga0207707_10063197 3300025912 Bacteria 3222
119 Ga0207671_10001051 3300025914 Bacteria 33539
120 Ga0207671_10001128 3300025914 Bacteria 32167
121 Ga0207671_10006181 3300025914 Bacteria 10753
122 Ga0207671_10011293 3300025914 Bacteria 7281
123 Ga0207671_10030710 3300025914 Bacteria 4005
124 Ga0207671_10034377 3300025914 Bacteria 3766
125 Ga0207660_10025263 3300025917 Bacteria 4031
126 Ga0207694_10027060 3300025924 Bacteria 4366
127 Ga0207644_10009925 3300025931 Bacteria 6264
128 Ga0207690_10000258 3300025932 Bacteria 38278
129 Ga0207704_10000016 3300025938 Bacteria 158362
130 Ga0207689_10002619 3300025942 Bacteria 16651
131 Ga0207661_10029032 3300025944 Bacteria 4244
132 Ga0207667_10000046 3300025949 Bacteria 245420
133 Ga0207667_10078626 3300025949 Bacteria 3419
134 Ga0207667_10084491 3300025949 Bacteria 3286
135 Ga0207651_10003143 3300025960 Bacteria 8050
136 Ga0207639_10001710 3300026041 Bacteria 14786
137 Ga0207702_10000165 3300026078 Bacteria 79066
138 Ga0207648_10000661 3300026089 Bacteria 38618
139 Ga0207675_100019768 3300026118 Bacteria 6287
140 Ga0207683_10028334 3300026121 Bacteria 4842
141 Ga0207698_10026376 3300026142 Bacteria 4110
142 Ga0307517_10001644 3300028786 Bacteria 36929
143 Ga0307515_10000135 3300028794 Bacteria 175323
144 Ga0307515_10000432 3300028794 Bacteria 100348
145 Ga0307515_10001312 3300028794 Bacteria 56474
146 Ga0307515_10076037 3300028794 Bacteria 4463
147 Ga0265338_10089310 3300028800 Bacteria 2554
148 Ga0265327_10000101 3300031251 Bacteria 188671
149 Ga0307514_10021930 3300031649 Bacteria 5199
150 Ga0316576_10001552 3300031727 Bacteria 12451
151 Ga0307405_10000029 3300031731 Bacteria 101506
152 Ga0307407_10008417 3300031903 Bacteria 4733
153 Ga0307416_100000072 3300032002 Bacteria 83317
154 Ga0307414_10033834 3300032004 Bacteria 3382
155 Ga0307507_10000010 3300033179 Bacteria 265208
156 Ga0307510_10003306 3300033180 Bacteria 18769
157 Ga0495627_022555 3300046453 Bacteria 2070
158 Ga0495638_0000006 3300046460 Bacteria 668846
159 Ga0495650_0000003 3300046471 Bacteria 900730
160 Ga0495585_0000470 3300046492 Bacteria 38600
161 Ga0495585_0002063 3300046492 Bacteria 14780
162 Ga0495606_0003323 3300046507 Bacteria 17173
163 Ga0495606_0012407 3300046507 Bacteria 6835
164 Ga0495606_0037297 3300046507 Bacteria 3302
165 Ga0495610_0000815 3300046512 Bacteria 29262
166 Ga0495616_0016926 3300046513 Bacteria 4026
167 Ga0495631_0006481 3300046518 Bacteria 6039
168 Ga0495648_0004098 3300046524 Bacteria 12572
169 Ga0495609_0003539 3300046538 Bacteria 8903
170 Ga0495609_0053120 3300046538 Bacteria 1802
171 Ga0495633_0000014 3300046558 Bacteria 261742
172 Ga0495633_0000058 3300046558 Bacteria 147584
173 Ga0495668_0000003 3300046616 Bacteria 695023
174 Ga0495625_0000471 3300046660 Bacteria 60628
175 Ga0495625_0000719 3300046660 Bacteria 46578
176 Ga0495625_0006731 3300046660 Bacteria 10179
177 Ga0495625_0016986 3300046660 Bacteria 5707
178 Ga0495625_0041422 3300046660 Bacteria 3352
179 Ga0495649_0000037 3300046694 Bacteria 133848
180 Ga0495687_002893 3300047443 Bacteria 13105
181 Ga0495687_005474 3300047443 Bacteria 8076
182 Ga0495673_0010857 3300047469 Bacteria 4928
183 Ga0495686_0000160 3300047472 Bacteria 128437
184 Ga0495686_0000911 3300047472 Bacteria 37058
185 Ga0495686_0114847 3300047472 Bacteria 1611
186 Ga0496121_0000468 3300048924 Bacteria 78727
187 Ga0496124_0136211 3300048927 Bacteria 1944
188 Ga0501047_0083810 3300049581 Bacteria 3064
189 Ga0501241_001294 3300049758 Bacteria 5190
190 nmdc:mga0k408_522_c1 3300050493 Bacteria 21138
191 nmdc:mga08y16_8143_c1 3300050511 Bacteria 10966
192 Ga0500562_000096 3300053108 Bacteria 33894
193 Ga0500608_005291 3300053122 Bacteria 5111
194 Ga0500618_000004 3300053125 Bacteria 293180
195 Ga0500616_0000065 3300053153 Bacteria 239287
196 Ga0500622_0000214 3300053156 Bacteria 61277
197 Ga0500622_0000320 3300053156 Bacteria 48271
198 Ga0500622_0000547 3300053156 Bacteria 34632
199 Ga0500624_000658 3300053157 Bacteria 8964
200 Ga0500611_000002 3300053727 Bacteria 345991

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048927 Ga0496124_0136211 Ga0496124_0136211_58_1416 452
2 3300005334 Ga0068869_100006032 Ga0068869_1000060322 479
3 3300025942 Ga0207689_10002619 Ga0207689_100026199 479
4 3300026118 Ga0207675_100019768 Ga0207675_1000197683 479
5 3300005347 Ga0070668_100067006 Ga0070668_1000670062 481
6 3300047443 Ga0495687_005474 Ga0495687_005474_1248_2792 496
7 iso_pu_bacteria 2818991437 2819549808 498
8 3300049758 Ga0501241_001294 Ga0501241_001294_2970_4508 502
9 3300028786 Ga0307517_10001644 Ga0307517_100016446 506
10 3300033180 Ga0307510_10003306 Ga0307510_1000330615 506
11 3300046460 Ga0495638_0000006 Ga0495638_0000006_82773_84302 507
12 3300053153 Ga0500616_0000065 Ga0500616_0000065_60350_61879 507
13 iso_pu_bacteria 2599185184 2599478533 507
14 iso_pu_bacteria 2852623160 2852625837 507
15 iso_pu_bacteria 2884933994 2884935635 507
16 iso_pu_bacteria 2928078545 2928080414 507
17 iso_pu_bacteria 2928147474 2928149414 507
18 iso_pu_bacteria 2932082852 2932083244 507
19 iso_pu_bacteria 2977232053 2977232794 507
20 3300047472 Ga0495686_0000911 Ga0495686_0000911_250_1785 508
21 iso_pu_bacteria 2738541302 2738855514 508
22 iso_pu_bacteria 2739367651 2739589924 508
23 iso_pu_bacteria 2818991437 2819548625 508
24 iso_pu_bacteria 2842722452 2842722655 508
25 iso_pu_bacteria 2842909656 2842914875 508
26 iso_pu_bacteria 2849281842 2849285769 508
27 iso_pu_bacteria 2904445276 2904448566 508
28 iso_pu_bacteria 2919437846 2919441251 508
29 iso_pu_bacteria 2929239360 2929244880 508
30 iso_pu_bacteria 2945997725 2945999574 508
31 iso_pu_bacteria 2954016120 2954016321 508
32 3300002737 JGI25162J39368_1000624 JGI25162J39368_100062412 509
33 3300003323 rootH1_10014018 rootH1_1001401813 509
34 3300009545 Ga0105237_10003790 Ga0105237_1000379011 509
35 3300009545 Ga0105237_10017414 Ga0105237_100174143 509
36 3300010375 Ga0105239_10000040 Ga0105239_10000040159 509
37 3300013296 Ga0157374_10064777 Ga0157374_100647772 509
38 3300025230 Ga0209563_103316 Ga0209563_1033162 509
39 3300025231 Ga0207427_100066 Ga0207427_100066113 509
40 3300025233 Ga0209437_100010 Ga0209437_100010228 509
41 3300025261 Ga0209233_1000017 Ga0209233_1000017241 509
42 3300025914 Ga0207671_10011293 Ga0207671_100112937 509
43 3300025914 Ga0207671_10034377 Ga0207671_100343772 509
44 3300028794 Ga0307515_10076037 Ga0307515_100760373 509
45 3300031727 Ga0316576_10001552 Ga0316576_100015528 509
46 3300046507 Ga0495606_0012407 Ga0495606_0012407_4613_6154 509
47 3300001990 JGI24737J22298_10000564 JGI24737J22298_100005642 510
48 3300002067 JGI24735J21928_10000002 JGI24735J21928_10000002419 510
49 3300005327 Ga0070658_10000113 Ga0070658_1000011366 510
50 3300005328 Ga0070676_10000430 Ga0070676_1000043010 510
51 3300005364 Ga0070673_100000361 Ga0070673_10000036117 510
52 3300005366 Ga0070659_100000417 Ga0070659_10000041712 510
53 3300005456 Ga0070678_100011677 Ga0070678_1000116772 510
54 3300005459 Ga0068867_100000725 Ga0068867_10000072517 510
55 3300005539 Ga0068853_100002099 Ga0068853_1000020997 510
56 3300005563 Ga0068855_100013686 Ga0068855_1000136862 510
57 3300005563 Ga0068855_100030333 Ga0068855_1000303333 510
58 3300005563 Ga0068855_100164669 Ga0068855_1001646693 510
59 3300005616 Ga0068852_100001570 Ga0068852_1000015709 510
60 3300005718 Ga0068866_10017905 Ga0068866_100179052 510
61 3300006195 Ga0075366_10003776 Ga0075366_100037762 510
62 3300006195 Ga0075366_10022585 Ga0075366_100225852 510
63 3300006237 Ga0097621_100000076 Ga0097621_10000007641 510
64 3300006358 Ga0068871_100000070 Ga0068871_1000000702 510
65 3300006881 Ga0068865_100000763 Ga0068865_1000007631 510
66 3300009174 Ga0105241_10013999 Ga0105241_100139993 510
67 3300009545 Ga0105237_10000709 Ga0105237_1000070910 510
68 3300009545 Ga0105237_10001498 Ga0105237_1000149810 510
69 3300009551 Ga0105238_10001588 Ga0105238_100015886 510
70 3300010375 Ga0105239_10011314 Ga0105239_100113147 510
71 3300010375 Ga0105239_10095888 Ga0105239_100958882 510
72 3300011119 Ga0105246_10128315 Ga0105246_101283151 510
73 3300013102 Ga0157371_10057148 Ga0157371_100571481 510
74 3300013296 Ga0157374_10000147 Ga0157374_1000014739 510
75 3300013297 Ga0157378_10037912 Ga0157378_100379122 510
76 3300013307 Ga0157372_10005486 Ga0157372_100054864 510
77 3300013308 Ga0157375_10004525 Ga0157375_100045254 510
78 3300021361 Ga0213872_10013338 Ga0213872_100133382 510
79 3300025907 Ga0207645_10000300 Ga0207645_1000030027 510
80 3300025909 Ga0207705_10000160 Ga0207705_1000016010 510
81 3300025911 Ga0207654_10011559 Ga0207654_100115593 510
82 3300025914 Ga0207671_10001051 Ga0207671_1000105112 510
83 3300025914 Ga0207671_10030710 Ga0207671_100307102 510
84 3300025924 Ga0207694_10027060 Ga0207694_100270604 510
85 3300025931 Ga0207644_10009925 Ga0207644_100099254 510
86 3300025932 Ga0207690_10000258 Ga0207690_1000025819 510
87 3300025938 Ga0207704_10000016 Ga0207704_1000001662 510
88 3300025949 Ga0207667_10078626 Ga0207667_100786262 510
89 3300025949 Ga0207667_10084491 Ga0207667_100844912 510
90 3300025960 Ga0207651_10003143 Ga0207651_100031435 510
91 3300026041 Ga0207639_10001710 Ga0207639_100017107 510
92 3300026089 Ga0207648_10000661 Ga0207648_1000066127 510
93 3300026121 Ga0207683_10028334 Ga0207683_100283343 510
94 3300026142 Ga0207698_10026376 Ga0207698_100263762 510
95 3300046518 Ga0495631_0006481 Ga0495631_0006481_2810_4351 510
96 3300047443 Ga0495687_002893 Ga0495687_002893_1430_2971 510
97 3300050493 nmdc:mga0k408_522_c1 nmdc:mga0k408_522_c1_1063_2610 510
98 3300053156 Ga0500622_0000547 Ga0500622_0000547_29073_30620 510
99 iso_pu_bacteria 2929921140 2929924784 510
100 iso_pu_bacteria 8003151029 8003156273 510
101 3300002737 JGI25162J39368_1000024 JGI25162J39368_100002472 511
102 3300003316 rootH1_10022426 rootH1_1002242610 511
103 3300003781 Ga0055536_1000007 Ga0055536_1000007141 511
104 3300003791 Ga0055530_10002497 Ga0055530_100024974 511
105 3300004803 Ga0058862_10180500 Ga0058862_101805004 511
106 3300005288 Ga0065714_10002188 Ga0065714_10002188138 511
107 3300005288 Ga0065714_10007618 Ga0065714_100076182 511
108 3300005288 Ga0065714_10024781 Ga0065714_100247811 511
109 3300005329 Ga0070683_100005004 Ga0070683_1000050046 511
110 3300005336 Ga0070680_100024408 Ga0070680_1000244083 511
111 3300005535 Ga0070684_100061102 Ga0070684_1000611022 511
112 3300005563 Ga0068855_100000033 Ga0068855_10000003365 511
113 3300005614 Ga0068856_100001524 Ga0068856_1000015247 511
114 3300006195 Ga0075366_10000806 Ga0075366_100008067 511
115 3300006195 Ga0075366_10022801 Ga0075366_100228013 511
116 3300009545 Ga0105237_10002998 Ga0105237_1000299813 511
117 3300009545 Ga0105237_10011187 Ga0105237_100111877 511
118 3300010375 Ga0105239_10000062 Ga0105239_1000006251 511
119 3300013100 Ga0157373_10000310 Ga0157373_1000031034 511
120 3300013102 Ga0157371_10000051 Ga0157371_10000051121 511
121 3300013104 Ga0157370_10042464 Ga0157370_100424642 511
122 3300013104 Ga0157370_10095347 Ga0157370_100953472 511
123 3300013105 Ga0157369_10000033 Ga0157369_1000003387 511
124 3300013306 Ga0163162_10000054 Ga0163162_1000005467 511
125 3300013306 Ga0163162_10008463 Ga0163162_100084635 511
126 3300014497 Ga0182008_10000326 Ga0182008_1000032618 511
127 3300015261 Ga0182006_1000068 Ga0182006_100006898 511
128 3300015261 Ga0182006_1000988 Ga0182006_10009887 511
129 3300015262 Ga0182007_10000015 Ga0182007_1000001561 511
130 3300015682 Ga0183373_1005 Ga0183373_1005110 511
131 3300025233 Ga0209437_100017 Ga0209437_10001772 511
132 3300025250 Ga0209026_1000432 Ga0209026_10004327 511
133 3300025292 Ga0209676_1000058 Ga0209676_1000058137 511
134 3300025298 Ga0209050_1000054 Ga0209050_1000054137 511
135 3300025912 Ga0207707_10063197 Ga0207707_100631972 511
136 3300025914 Ga0207671_10001128 Ga0207671_1000112813 511
137 3300025914 Ga0207671_10006181 Ga0207671_100061819 511
138 3300025917 Ga0207660_10025263 Ga0207660_100252633 511
139 3300025944 Ga0207661_10029032 Ga0207661_100290325 511
140 3300025949 Ga0207667_10000046 Ga0207667_10000046141 511
141 3300026078 Ga0207702_10000165 Ga0207702_100001653 511
142 3300028794 Ga0307515_10000432 Ga0307515_1000043259 511
143 3300028800 Ga0265338_10089310 Ga0265338_100893102 511
144 3300031731 Ga0307405_10000029 Ga0307405_1000002944 511
145 3300031903 Ga0307407_10008417 Ga0307407_100084172 511
146 3300032002 Ga0307416_100000072 Ga0307416_10000007241 511
147 3300032004 Ga0307414_10033834 Ga0307414_100338342 511
148 3300046471 Ga0495650_0000003 Ga0495650_0000003_864432_865982 511
149 3300046492 Ga0495585_0000470 Ga0495585_0000470_11660_13210 511
150 3300046492 Ga0495585_0002063 Ga0495585_0002063_13166_14716 511
151 3300046507 Ga0495606_0003323 Ga0495606_0003323_12600_14150 511
152 3300046507 Ga0495606_0037297 Ga0495606_0037297_1487_3028 511
153 3300046512 Ga0495610_0000815 Ga0495610_0000815_23725_25275 511
154 3300046513 Ga0495616_0016926 Ga0495616_0016926_2103_3653 511
155 3300046524 Ga0495648_0004098 Ga0495648_0004098_10894_12444 511
156 3300046538 Ga0495609_0003539 Ga0495609_0003539_2236_3786 511
157 3300046538 Ga0495609_0053120 Ga0495609_0053120_90_1640 511
158 3300046558 Ga0495633_0000014 Ga0495633_0000014_69232_70782 511
159 3300046616 Ga0495668_0000003 Ga0495668_0000003_316773_318323 511
160 3300046660 Ga0495625_0000471 Ga0495625_0000471_7370_8920 511
161 3300046660 Ga0495625_0000719 Ga0495625_0000719_8785_10335 511
162 3300046660 Ga0495625_0006731 Ga0495625_0006731_2623_4173 511
163 3300046660 Ga0495625_0016986 Ga0495625_0016986_1964_3514 511
164 3300046660 Ga0495625_0041422 Ga0495625_0041422_422_1972 511
165 3300046694 Ga0495649_0000037 Ga0495649_0000037_99017_100567 511
166 3300047469 Ga0495673_0010857 Ga0495673_0010857_2265_3815 511
167 3300047472 Ga0495686_0000160 Ga0495686_0000160_10952_12502 511
168 3300053108 Ga0500562_000096 Ga0500562_000096_543_2117 511
169 3300053122 Ga0500608_005291 Ga0500608_005291_442_2052 511
170 3300053125 Ga0500618_000004 Ga0500618_000004_67348_68898 511
171 3300053156 Ga0500622_0000214 Ga0500622_0000214_9715_11289 511
172 3300053157 Ga0500624_000658 Ga0500624_000658_4424_5974 511
173 3300053727 Ga0500611_000002 Ga0500611_000002_222898_224445 511
174 iso_pu_bacteria 2818991444 2819589069 511
175 3300003322 rootL2_10096496 rootL2_100964964 512
176 3300003794 Ga0055531_10000516 Ga0055531_1000051618 512
177 3300009553 Ga0105249_10037198 Ga0105249_100371982 512
178 3300010375 Ga0105239_10009182 Ga0105239_100091823 512
179 3300025242 Ga0209258_100068 Ga0209258_100068224 512
180 3300025250 Ga0209026_1001025 Ga0209026_100102511 512
181 3300025254 Ga0209148_1000182 Ga0209148_100018210 512
182 3300025304 Ga0209257_1000001 Ga0209257_10000011010 512
183 3300028794 Ga0307515_10000135 Ga0307515_1000013537 512
184 3300028794 Ga0307515_10001312 Ga0307515_100013122 512
185 3300031649 Ga0307514_10021930 Ga0307514_100219304 512
186 3300033179 Ga0307507_10000010 Ga0307507_10000010115 512
187 3300046453 Ga0495627_022555 Ga0495627_022555_57_1595 512
188 3300046558 Ga0495633_0000058 Ga0495633_0000058_80873_82411 512
189 3300047472 Ga0495686_0114847 Ga0495686_0114847_53_1600 512
190 3300048924 Ga0496121_0000468 Ga0496121_0000468_161_1705 512
191 3300053156 Ga0500622_0000320 Ga0500622_0000320_45709_47247 512
192 iso_pu_bacteria 2929154850 2929158333 512
193 3300005539 Ga0068853_100018679 Ga0068853_1000186791 513
194 3300005834 Ga0068851_10072338 Ga0068851_100723381 513
195 3300013102 Ga0157371_10001828 Ga0157371_100018282 513
196 3300013306 Ga0163162_10121595 Ga0163162_101215952 513
197 3300015261 Ga0182006_1012031 Ga0182006_10120312 513
198 3300031251 Ga0265327_10000101 Ga0265327_1000010138 513
199 3300049581 Ga0501047_0083810 Ga0501047_0083810_1365_2906 513
200 3300002738 JGI25154J39366_1000028 JGI25154J39366_1000028161 514
201 3300002741 JGI25157J39369_1003002 JGI25157J39369_10030024 514
202 3300003215 JGI25153J46596_10003799 JGI25153J46596_100037995 514
203 3300006844 Ga0075428_100026809 Ga0075428_1000268092 514
204 3300009094 Ga0111539_10008980 Ga0111539_100089803 514
205 3300010375 Ga0105239_10251794 Ga0105239_102517942 514
206 3300013104 Ga0157370_10076129 Ga0157370_100761292 514
207 3300025246 Ga0209646_1000006 Ga0209646_100000667 514
208 3300025250 Ga0209026_1001301 Ga0209026_10013013 514
209 3300025298 Ga0209050_1001434 Ga0209050_100143414 514
210 3300025302 Ga0207426_1000209 Ga0207426_100020973 514
211 3300050511 nmdc:mga08y16_8143_c1 nmdc:mga08y16_8143_c1_306_1859 514
212 3300001989 JGI24739J22299_10001420 JGI24739J22299_100014204 515
213 3300003354 JGI25160J50197_1005555 JGI25160J50197_10055553 515
214 3300003790 Ga0055528_1000029 Ga0055528_100002912 515
215 3300003791 Ga0055530_10000551 Ga0055530_100005518 515
216 3300005262 Ga0065165_1000052 Ga0065165_100005278 515
217 3300025273 Ga0209673_1000993 Ga0209673_100099310 515
218 3300025295 Ga0209564_1009241 Ga0209564_10092411 515
219 3300025295 Ga0209564_1009680 Ga0209564_10096801 515
220 3300025297 Ga0209758_1007751 Ga0209758_10077514 515
221 3300025298 Ga0209050_1000259 Ga0209050_100025949 515
222 3300025302 Ga0207426_1000678 Ga0207426_100067820 515
223 3300025304 Ga0209257_1007777 Ga0209257_10077772 515

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06964

Alpha-L-AF_C

Alpha-L-arabinofuranosidase C-terminal domain

361

551

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6d25-assembly1.cif.gz_B crystal structure of the gh51 arabinofuranosidase from xanthomonas axonopodis pv. citri 0.9637 23 514
6d25-assembly1.cif.gz_B crystal structure of the gh51 arabinofuranosidase from xanthomonas axonopodis pv. citri 0.958 23 514
6zt7-assembly1.cif.gz_A x-ray structure of mutated arabinofuranosidase 0.9577 23 514
6zt9-assembly1.cif.gz_B x-ray structure of mutated arabinofuranosidase 0.9564 23 514
2vrq-assembly2.cif.gz_B structure of an inactive mutant of arabinofuranosidase from thermobacillus xylanilyticus in complex with a pentasaccharide 0.9563 24 515
ID Description Score Start End Superfamily
6d25A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9512 38 399 3.20.20.80
6d25A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9487 38 399 3.20.20.80
2vrkA01 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9262 400 514 2.60.40.1180
3ug3C02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8774 38 399 3.20.20.80
3ug3C02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.875 38 399 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A519YKC6-F1-model_v4 Alpha-N-arabinofuranosidase 0.993 418 514 GO:0000272
GO:0046373
GO:0046556
AF-A0A4Q3W6C9-F1-model_v4 Alpha-N-arabinofuranosidase 0.9918 428 514 GO:0046373
GO:0046556
AF-A0A7K3IYH7-F1-model_v4 Alpha-N-arabinofuranosidase 0.9911 387 514 GO:0000272
GO:0046373
GO:0046556
AF-A0A197C1L4-F1-model_v4 deleted 0.9862 420 514
AF-A0A535WWA0-F1-model_v4 Alpha-N-arabinofuranosidase 0.9842 387 514 GO:0000272
GO:0046373
GO:0046556

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pLDDT pTM Quality
85.51 0.9 High
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Predicted Structure (AlphaFold2)

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