F335608

General Info

Members Datasets Scaffolds Average Seq Length
223 168 446 230

Family's Representative Sequence

Representative Sequence 3300013308|Ga0157375_10318262|Ga0157375_103182622
Length 261
Sequence MSVVRSSMLPMIRLAQPGWFVYDRTMKDGPNIVGIAALIGDHARAEVLTALMADRALTATELAAGAGVTKQTISAHLAKLVAAGLVAVESQGRHRYFRLADRDVAHLIESLMGVAFRTGAVRVRASPREPALRRARVCYDHLAGEVGVRVYENLLQQRALVPTLGSNGNGLVLTTVGERLFRKLRIDTAALAGQKRAFCRACLDWSERRHHLAGALGAALLTRFIHLGWAKRARESRVVTITASGERELQKLFDTRGSALA

Samples

Sample ID Description Type Environment
1 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
40 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
53 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
54 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
58 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
92 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
93 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
94 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
95 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
96 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
97 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
98 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
99 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
100 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
101 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
102 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
103 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
104 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
105 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
106 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
107 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
108 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
109 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
110 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
111 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
112 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
113 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
114 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
115 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
116 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
117 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
118 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
119 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
120 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
121 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
122 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
123 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
124 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
125 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
126 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
127 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
128 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
129 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
130 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
131 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
132 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
133 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
134 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
135 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
136 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
137 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
138 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
139 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
140 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
141 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
142 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
143 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
144 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
145 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
146 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
147 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
148 3300049160 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
149 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
152 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
153 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
154 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
155 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
156 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
157 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
158 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
159 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
160 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
161 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
162 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
163 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
164 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
165 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
166 2643221556 Massilia sp. Root1485 Isolate Unclassified
167 2643221684 Massilia sp. Root133 Isolate Unclassified
168 8047673197 Telluria mixta LMG 11547 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.21
Metatranscriptomes 0.45
Isolates 1.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.48
Nodule 0
Rhizoplane 2.24
Rhizosphere 90.13
Stem 0
Stem Tuber 0
Unclassified 1.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157375_10318262 3300013308 Bacteria 1720
2 rootL2_10029611 3300003322 Bacteria 2537
3 Ga0070658_10002654 3300005327 Bacteria 14881
4 Ga0070658_10021004 3300005327 Bacteria 5230
5 Ga0070658_10253838 3300005327 Bacteria 1492
6 Ga0070658_10535011 3300005327 Bacteria 1013
7 Ga0070670_100204819 3300005331 Bacteria 1715
8 Ga0070670_100437536 3300005331 Bacteria 1158
9 Ga0068869_100218020 3300005334 Bacteria 1511
10 Ga0070680_100125782 3300005336 Bacteria 2142
11 Ga0070660_100106270 3300005339 Bacteria 2229
12 Ga0070689_100006311 3300005340 Bacteria 8190
13 Ga0070661_100009810 3300005344 Bacteria 6638
14 Ga0070668_100072695 3300005347 Bacteria 2680
15 Ga0070669_100346873 3300005353 Bacteria 1204
16 Ga0070669_100608919 3300005353 Bacteria 916
17 Ga0070675_100015692 3300005354 Bacteria 5994
18 Ga0070674_100198455 3300005356 Bacteria 1548
19 Ga0070674_100463515 3300005356 Bacteria 1048
20 Ga0070659_100008329 3300005366 Bacteria 7569
21 Ga0070659_100081526 3300005366 Bacteria 2584
22 Ga0070709_10328360 3300005434 Bacteria 1125
23 Ga0070714_100948617 3300005435 Bacteria 836
24 Ga0070713_100046662 3300005436 Bacteria 3555
25 Ga0070708_100013252 3300005445 Bacteria 6745
26 Ga0070678_100654752 3300005456 Bacteria 942
27 Ga0070681_10001057 3300005458 Bacteria 23417
28 Ga0068867_100023769 3300005459 Bacteria 4389
29 Ga0068867_100368300 3300005459 Bacteria 1204
30 Ga0070679_100037232 3300005530 Bacteria 4831
31 Ga0070684_100196131 3300005535 Bacteria 1839
32 Ga0068853_100005532 3300005539 Bacteria 9910
33 Ga0068853_100034435 3300005539 Bacteria 4299
34 Ga0070696_100431425 3300005546 Unclassified 1037
35 Ga0068855_100154736 3300005563 Bacteria 2605
36 Ga0068857_100038110 3300005577 Bacteria 4257
37 Ga0068856_100308181 3300005614 Bacteria 1601
38 Ga0068852_100013127 3300005616 Bacteria 6330
39 Ga0068852_100138320 3300005616 Bacteria 2251
40 Ga0068852_100337853 3300005616 Bacteria 1467
41 Ga0068861_100225637 3300005719 Bacteria 1586
42 Ga0068861_100398321 3300005719 Bacteria 1221
43 Ga0068863_100012005 3300005841 Bacteria 8370
44 Ga0068863_100166007 3300005841 Bacteria 2117
45 Ga0068858_100032936 3300005842 Bacteria 4812
46 Ga0068860_100309072 3300005843 Bacteria 1550
47 Ga0068860_101130545 3300005843 Bacteria 803
48 Ga0081455_10118397 3300005937 Bacteria 2091
49 Ga0075366_10097453 3300006195 Bacteria 1763
50 Ga0097621_100017863 3300006237 Bacteria 5401
51 Ga0097621_100049774 3300006237 Bacteria 3406
52 Ga0097621_100179711 3300006237 Bacteria 1828
53 Ga0068871_100039470 3300006358 Bacteria 3778
54 Ga0068865_100092334 3300006881 Bacteria 2199
55 Ga0075436_100128496 3300006914 Bacteria 1776
56 Ga0075435_100817310 3300007076 Bacteria 812
57 Ga0105240_10017277 3300009093 Bacteria 9729
58 Ga0105245_10132394 3300009098 Bacteria 2340
59 Ga0105245_10138315 3300009098 Bacteria 2291
60 Ga0105242_10011671 3300009176 Bacteria 6760
61 Ga0105242_10093486 3300009176 Bacteria 2535
62 Ga0105248_10067079 3300009177 Bacteria 4028
63 Ga0105248_10667052 3300009177 Bacteria 1173
64 Ga0105238_10110826 3300009551 Bacteria 2725
65 Ga0105238_10178613 3300009551 Bacteria 2099
66 Ga0157373_10036568 3300013100 Bacteria 3523
67 Ga0157370_10010672 3300013104 Bacteria 9663
68 Ga0157369_10002825 3300013105 Bacteria 20721
69 Ga0163162_10410833 3300013306 Bacteria 1486
70 Ga0157372_10038044 3300013307 Bacteria 5309
71 Ga0163163_10037785 3300014325 Bacteria 4698
72 Ga0157380_10207559 3300014326 Bacteria 1743
73 Ga0157380_10318126 3300014326 Bacteria 1442
74 Ga0157380_10924584 3300014326 Bacteria 900
75 Ga0157377_10001697 3300014745 Bacteria 9604
76 Ga0157379_10108989 3300014968 Bacteria 2487
77 Ga0157376_10039357 3300014969 Bacteria 3856
78 Ga0157376_10290486 3300014969 Bacteria 1543
79 Ga0163161_10203892 3300017792 Bacteria 1525
80 Ga0213872_10001190 3300021361 Bacteria 17646
81 Ga0207682_10118991 3300025893 Bacteria 1170
82 Ga0207688_10023839 3300025901 Bacteria 3354
83 Ga0207699_10172301 3300025906 Bacteria 1449
84 Ga0207705_10016693 3300025909 Bacteria 5259
85 Ga0207705_10182144 3300025909 Bacteria 1586
86 Ga0207705_10215680 3300025909 Bacteria 1456
87 Ga0207707_10004620 3300025912 Bacteria 12097
88 Ga0207695_10058591 3300025913 Bacteria 3997
89 Ga0207663_10576251 3300025916 Unclassified 882
90 Ga0207657_10002915 3300025919 Bacteria 18364
91 Ga0207657_10064778 3300025919 Bacteria 3118
92 Ga0207649_10021644 3300025920 Bacteria 3705
93 Ga0207652_10021625 3300025921 Bacteria 5310
94 Ga0207652_10021823 3300025921 Bacteria 5288
95 Ga0207694_10150875 3300025924 Bacteria 1872
96 Ga0207650_10238617 3300025925 Bacteria 1469
97 Ga0207650_10849693 3300025925 Bacteria 774
98 Ga0207706_10279513 3300025933 Bacteria 1456
99 Ga0207669_10107374 3300025937 Bacteria 1862
100 Ga0207669_10354200 3300025937 Bacteria 1135
101 Ga0207691_10243695 3300025940 Bacteria 1553
102 Ga0207711_10044537 3300025941 Bacteria 3788
103 Ga0207711_10093139 3300025941 Bacteria 2653
104 Ga0207689_10250391 3300025942 Bacteria 1465
105 Ga0207689_10453833 3300025942 Bacteria 1072
106 Ga0207661_10130473 3300025944 Bacteria 2152
107 Ga0207679_10312845 3300025945 Bacteria 1357
108 Ga0207668_10091607 3300025972 Bacteria 2235
109 Ga0207677_10650061 3300026023 Bacteria 931
110 Ga0207703_10093266 3300026035 Bacteria 2535
111 Ga0207703_10253616 3300026035 Bacteria 1587
112 Ga0207639_10012537 3300026041 Bacteria 5907
113 Ga0207639_10032814 3300026041 Bacteria 3825
114 Ga0207678_10066490 3300026067 Bacteria 3096
115 Ga0207702_10093300 3300026078 Bacteria 2640
116 Ga0207641_10023480 3300026088 Bacteria 5081
117 Ga0207641_10135324 3300026088 Bacteria 2218
118 Ga0207648_10007353 3300026089 Bacteria 10845
119 Ga0207648_10300982 3300026089 Bacteria 1438
120 Ga0207674_10294434 3300026116 Bacteria 1572
121 Ga0207675_100102302 3300026118 Bacteria 2700
122 Ga0207675_100481754 3300026118 Bacteria 1233
123 Ga0207683_10057798 3300026121 Bacteria 3405
124 Ga0207683_10184444 3300026121 Bacteria 1893
125 Ga0207698_10025161 3300026142 Bacteria 4189
126 Ga0268265_10015104 3300028380 Bacteria 5276
127 Ga0268265_10454436 3300028380 Unclassified 1197
128 Ga0268264_10137961 3300028381 Bacteria 2171
129 Ga0268264_10612660 3300028381 Bacteria 1074
130 Ga0265338_10072373 3300028800 Bacteria 2943
131 Ga0265331_10000006 3300031250 Bacteria 418907
132 Ga0265314_10011553 3300031711 Bacteria 7274
133 Ga0307412_10637640 3300031911 Bacteria 907
134 Ga0307416_100160231 3300032002 Bacteria 2079
135 Ga0307416_101396875 3300032002 Bacteria 806
136 Ga0373931_0019754 3300035691 Bacteria 3366
137 Ga0373933_0195063 3300035724 Bacteria 1295
138 Ga0373937_0386736 3300036401 Bacteria 1327
139 Ga0395899_0014025 3300037312 Bacteria 6118
140 Ga0395899_0217614 3300037312 Bacteria 1324
141 Ga0395900_0111237 3300037418 Bacteria 2813
142 Ga0395900_0270419 3300037418 Bacteria 1694
143 Ga0395898_0344385 3300037466 Bacteria 1421
144 Ga0395905_0222626 3300037471 Bacteria 1766
145 Ga0436361_0781067 3300039447 Bacteria 26148
146 Ga0451577_0325106 3300042876 Bacteria 1395
147 Ga0466969_0091897 3300044656 Bacteria 1437
148 Ga0466969_0099249 3300044656 Bacteria 1372
149 Ga0466965_0105493 3300044683 Bacteria 1444
150 Ga0466966_0008254 3300044684 Bacteria 6907
151 Ga0466964_0002478 3300044706 Bacteria 6561
152 Ga0466968_0003311 3300044735 Bacteria 5942
153 Ga0466970_0037518 3300044765 Bacteria 2569
154 Ga0466957_0009340 3300044842 Bacteria 5597
155 Ga0466957_0066696 3300044842 Bacteria 2219
156 Ga0466957_0739070 3300044842 Bacteria 696
157 Ga0466959_0088292 3300045049 Bacteria 2229
158 Ga0466959_0310223 3300045049 Bacteria 1079
159 Ga0451576_0160824 3300045051 Bacteria 2344
160 Ga0451576_0574146 3300045051 Bacteria 1185
161 Ga0495590_0006826 3300046457 Bacteria 4436
162 Ga0495590_0012921 3300046457 Bacteria 3081
163 Ga0495605_0000087 3300046474 Bacteria 120256
164 Ga0495584_0010042 3300046491 Bacteria 4859
165 Ga0495607_0002567 3300046501 Bacteria 14672
166 Ga0495607_0006163 3300046501 Bacteria 8478
167 Ga0495610_0206610 3300046512 Bacteria 801
168 Ga0495616_0011930 3300046513 Bacteria 4951
169 Ga0495632_0224207 3300046519 Bacteria 849
170 Ga0495643_0009197 3300046522 Bacteria 6165
171 Ga0495648_0007560 3300046524 Bacteria 8685
172 Ga0495642_0002336 3300046528 Bacteria 7736
173 Ga0495621_0004719 3300046539 Bacteria 3862
174 Ga0495597_0154704 3300046542 Bacteria 939
175 Ga0495645_0086969 3300046543 Bacteria 2236
176 Ga0495656_0050218 3300046615 Bacteria 1780
177 Ga0495668_0043388 3300046616 Bacteria 2502
178 Ga0495661_0011411 3300046665 Bacteria 6031
179 Ga0495661_0127493 3300046665 Bacteria 1398
180 Ga0495588_0000070 3300046674 Bacteria 227611
181 Ga0495649_0037566 3300046694 Bacteria 2658
182 Ga0495589_0000092 3300046794 Bacteria 85372
183 Ga0495660_0000117 3300046810 Bacteria 85237
184 Ga0495660_0038336 3300046810 Bacteria 2664
185 Ga0495672_0002183 3300047320 Bacteria 18230
186 Ga0495672_0153889 3300047320 Bacteria 1190
187 Ga0495683_0093572 3300047323 Bacteria 1453
188 Ga0495687_002852 3300047443 Bacteria 13266
189 Ga0495687_050799 3300047443 Bacteria 1764
190 Ga0495677_0001397 3300047445 Bacteria 9674
191 Ga0495626_0000006 3300048091 Bacteria 284977
192 Ga0496102_0085972 3300048905 Bacteria 2904
193 Ga0496107_0151025 3300048910 Bacteria 1718
194 Ga0496108_0304606 3300048911 Bacteria 1388
195 Ga0496113_0107061 3300048916 Bacteria 2172
196 Ga0496115_0043408 3300048918 Bacteria 3586
197 Ga0496121_0193364 3300048924 Bacteria 1457
198 Ga0496122_0010101 3300048925 Bacteria 9797
199 Ga0496123_0009734 3300048926 Bacteria 8602
200 Ga0496124_0112065 3300048927 Bacteria 2194
201 Ga0501304_006718 3300049160 Bacteria 933
202 Ga0501036_0162076 3300049572 Bacteria 1885
203 Ga0501047_0026924 3300049581 Bacteria 5536
204 Ga0501067_0003398 3300049583 Bacteria 8759
205 Ga0501070_0004324 3300049586 Bacteria 12210
206 Ga0501073_0004306 3300049589 Bacteria 10678
207 Ga0501080_0009796 3300049742 Bacteria 8756
208 Ga0501083_0065606 3300049744 Bacteria 2418
209 nmdc:mga0k408_238211_c1 3300050493 Bacteria 1086
210 nmdc:mga08x19_275463_c1 3300050514 Bacteria 1165
211 nmdc:mga08x19_405932_c1 3300050514 Bacteria 956
212 Ga0500583_0002351 3300053092 Bacteria 5662
213 Ga0500583_0117548 3300053092 Bacteria 1313
214 Ga0500651_0095254 3300053093 Bacteria 1830
215 Ga0500562_070398 3300053108 Bacteria 944
216 Ga0500652_104365 3300053131 Bacteria 1185
217 Ga0500568_0084735 3300053139 Bacteria 1200
218 Ga0500616_0000018 3300053153 Bacteria 610976
219 Ga0500622_0036647 3300053156 Bacteria 2563
220 Ga0501084_0447465 3300054114 Bacteria 1092
221 2643797727 2643221556 Bacteria 7251154
222 2644470491 2643221684 Bacteria 7145183
223 8047679033 8047673197 Bacteria 7395230
224 Ga0157375_10318262
225 rootL2_10029611
226 Ga0070658_10002654
227 Ga0070658_10021004
228 Ga0070658_10253838
229 Ga0070658_10535011
230 Ga0070670_100204819
231 Ga0070670_100437536
232 Ga0068869_100218020
233 Ga0070680_100125782
234 Ga0070660_100106270
235 Ga0070689_100006311
236 Ga0070661_100009810
237 Ga0070668_100072695
238 Ga0070669_100346873
239 Ga0070669_100608919
240 Ga0070675_100015692
241 Ga0070674_100198455
242 Ga0070674_100463515
243 Ga0070659_100008329
244 Ga0070659_100081526
245 Ga0070709_10328360
246 Ga0070714_100948617
247 Ga0070713_100046662
248 Ga0070708_100013252
249 Ga0070678_100654752
250 Ga0070681_10001057
251 Ga0068867_100023769
252 Ga0068867_100368300
253 Ga0070679_100037232
254 Ga0070684_100196131
255 Ga0068853_100005532
256 Ga0068853_100034435
257 Ga0070696_100431425
258 Ga0068855_100154736
259 Ga0068857_100038110
260 Ga0068856_100308181
261 Ga0068852_100013127
262 Ga0068852_100138320
263 Ga0068852_100337853
264 Ga0068861_100225637
265 Ga0068861_100398321
266 Ga0068863_100012005
267 Ga0068863_100166007
268 Ga0068858_100032936
269 Ga0068860_100309072
270 Ga0068860_101130545
271 Ga0081455_10118397
272 Ga0075366_10097453
273 Ga0097621_100017863
274 Ga0097621_100049774
275 Ga0097621_100179711
276 Ga0068871_100039470
277 Ga0068865_100092334
278 Ga0075436_100128496
279 Ga0075435_100817310
280 Ga0105240_10017277
281 Ga0105245_10132394
282 Ga0105245_10138315
283 Ga0105242_10011671
284 Ga0105242_10093486
285 Ga0105248_10067079
286 Ga0105248_10667052
287 Ga0105238_10110826
288 Ga0105238_10178613
289 Ga0157373_10036568
290 Ga0157370_10010672
291 Ga0157369_10002825
292 Ga0163162_10410833
293 Ga0157372_10038044
294 Ga0163163_10037785
295 Ga0157380_10207559
296 Ga0157380_10318126
297 Ga0157380_10924584
298 Ga0157377_10001697
299 Ga0157379_10108989
300 Ga0157376_10039357
301 Ga0157376_10290486
302 Ga0163161_10203892
303 Ga0213872_10001190
304 Ga0207682_10118991
305 Ga0207688_10023839
306 Ga0207699_10172301
307 Ga0207705_10016693
308 Ga0207705_10182144
309 Ga0207705_10215680
310 Ga0207707_10004620
311 Ga0207695_10058591
312 Ga0207663_10576251
313 Ga0207657_10002915
314 Ga0207657_10064778
315 Ga0207649_10021644
316 Ga0207652_10021625
317 Ga0207652_10021823
318 Ga0207694_10150875
319 Ga0207650_10238617
320 Ga0207650_10849693
321 Ga0207706_10279513
322 Ga0207669_10107374
323 Ga0207669_10354200
324 Ga0207691_10243695
325 Ga0207711_10044537
326 Ga0207711_10093139
327 Ga0207689_10250391
328 Ga0207689_10453833
329 Ga0207661_10130473
330 Ga0207679_10312845
331 Ga0207668_10091607
332 Ga0207677_10650061
333 Ga0207703_10093266
334 Ga0207703_10253616
335 Ga0207639_10012537
336 Ga0207639_10032814
337 Ga0207678_10066490
338 Ga0207702_10093300
339 Ga0207641_10023480
340 Ga0207641_10135324
341 Ga0207648_10007353
342 Ga0207648_10300982
343 Ga0207674_10294434
344 Ga0207675_100102302
345 Ga0207675_100481754
346 Ga0207683_10057798
347 Ga0207683_10184444
348 Ga0207698_10025161
349 Ga0268265_10015104
350 Ga0268265_10454436
351 Ga0268264_10137961
352 Ga0268264_10612660
353 Ga0265338_10072373
354 Ga0265331_10000006
355 Ga0265314_10011553
356 Ga0307412_10637640
357 Ga0307416_100160231
358 Ga0307416_101396875
359 Ga0373931_0019754
360 Ga0373933_0195063
361 Ga0373937_0386736
362 Ga0395899_0014025
363 Ga0395899_0217614
364 Ga0395900_0111237
365 Ga0395900_0270419
366 Ga0395898_0344385
367 Ga0395905_0222626
368 Ga0436361_0781067
369 Ga0451577_0325106
370 Ga0466969_0091897
371 Ga0466969_0099249
372 Ga0466965_0105493
373 Ga0466966_0008254
374 Ga0466964_0002478
375 Ga0466968_0003311
376 Ga0466970_0037518
377 Ga0466957_0009340
378 Ga0466957_0066696
379 Ga0466957_0739070
380 Ga0466959_0088292
381 Ga0466959_0310223
382 Ga0451576_0160824
383 Ga0451576_0574146
384 Ga0495590_0006826
385 Ga0495590_0012921
386 Ga0495605_0000087
387 Ga0495584_0010042
388 Ga0495607_0002567
389 Ga0495607_0006163
390 Ga0495610_0206610
391 Ga0495616_0011930
392 Ga0495632_0224207
393 Ga0495643_0009197
394 Ga0495648_0007560
395 Ga0495642_0002336
396 Ga0495621_0004719
397 Ga0495597_0154704
398 Ga0495645_0086969
399 Ga0495656_0050218
400 Ga0495668_0043388
401 Ga0495661_0011411
402 Ga0495661_0127493
403 Ga0495588_0000070
404 Ga0495649_0037566
405 Ga0495589_0000092
406 Ga0495660_0000117
407 Ga0495660_0038336
408 Ga0495672_0002183
409 Ga0495672_0153889
410 Ga0495683_0093572
411 Ga0495687_002852
412 Ga0495687_050799
413 Ga0495677_0001397
414 Ga0495626_0000006
415 Ga0496102_0085972
416 Ga0496107_0151025
417 Ga0496108_0304606
418 Ga0496113_0107061
419 Ga0496115_0043408
420 Ga0496121_0193364
421 Ga0496122_0010101
422 Ga0496123_0009734
423 Ga0496124_0112065
424 Ga0501304_006718
425 Ga0501036_0162076
426 Ga0501047_0026924
427 Ga0501067_0003398
428 Ga0501070_0004324
429 Ga0501073_0004306
430 Ga0501080_0009796
431 Ga0501083_0065606
432 nmdc:mga0k408_238211_c1
433 nmdc:mga08x19_275463_c1
434 nmdc:mga08x19_405932_c1
435 Ga0500583_0002351
436 Ga0500583_0117548
437 Ga0500651_0095254
438 Ga0500562_070398
439 Ga0500652_104365
440 Ga0500568_0084735
441 Ga0500616_0000018
442 Ga0500622_0036647
443 Ga0501084_0447465
444 2643797727
445 2644470491
446 8047679033

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12840

HTH_20

Helix-turn-helix domain

39

89

0.95

PF13412

HTH_24

Winged helix-turn-helix DNA-binding

41

87

0.95

PF01022

HTH_5

Bacterial regulatory protein, arsR family

41

88

0.93

PF01978

TrmB

Sugar-specific transcriptional regulator TrmB

43

102

0.93

PF12802

MarR_2

MarR family

41

95

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1u2w-assembly2.cif.gz_C crystal structure of the staphylococcus aureus pi258 cadc 0.9402 7 88
6cdb-assembly1.cif.gz_A crystal structure of v66l czra in the zn(ii)bound state 0.9238 7 90
1r1u-assembly1.cif.gz_B crystal structure of the metal-sensing transcriptional repressor czra from staphylococcus aureus in the apo-form 0.9202 7 91
1r1u-assembly2.cif.gz_D crystal structure of the metal-sensing transcriptional repressor czra from staphylococcus aureus in the apo-form 0.9194 7 90
6jmi-assembly2.cif.gz_B crystal structure of m.tuberculosis rv0081 0.9181 7 95
ID Description Score Start End Superfamily
1u2wC00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9402 7 88 1.10.10.10
af_Q57824_147_206_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9291 16 73 1.10.10.10
4awxB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9159 19 74 1.10.10.10
4lb5A00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9056 19 74 1.10.10.10
af_Q58793_322_389_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9029 16 79 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7U8JV40-F1-model_v4 deleted 0.9699 1 84
AF-A0A7C5XYY7-F1-model_v4 ArsR family transcriptional regulator 0.9518 7 92 GO:0003700
AF-A0A351QUX2-F1-model_v4 Transcriptional regulator 0.9497 7 91 GO:0003700
GO:0046686
AF-A0A7W7W8T0-F1-model_v4 DNA-binding transcriptional ArsR family regulator 0.949 7 92 GO:0003677
GO:0003700
AF-A0A6N7H8H0-F1-model_v4 Metalloregulator ArsR/SmtB family transcription factor 0.9487 7 92 GO:0003700

Map