F335561

General Info

Members Datasets Scaffolds Average Seq Length
223 149 446 187

Family's Representative Sequence

Representative Sequence 3300009176|Ga0105242_11448461|Ga0105242_114484611
Length 199
Sequence MAADDGAREDVHEPDADQASEAPPVVPDDEVAAAVVARFDGAVFTRSHGQPVVYVDRAVFAEVAKFLRDEQQFTMCVDVTATDHLLDGERYVPAAVTAAGVASERFEVIANFLSHVRNRRIRVICAVPGSDAKVPSLTGVYPGTDFPERETYDLFGIEFEGHPDLTRILMPDDWDGHPLRKDYPSARVPVTFKGDPHPR

Samples

Sample ID Description Type Environment
1 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
24 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
45 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
46 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
47 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
66 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
68 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
69 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
70 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
71 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
72 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
73 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
74 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
75 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
76 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
77 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
78 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
79 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
80 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
81 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
82 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
83 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
84 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
85 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
86 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
87 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
88 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
89 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
90 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
91 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
92 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
93 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
94 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
95 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
96 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
97 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
98 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
99 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
100 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
101 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
102 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
103 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
104 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
105 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
106 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
107 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
108 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
109 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
110 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
111 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
112 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
113 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
114 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
115 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
116 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
117 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
118 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
119 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
120 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
121 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
122 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
123 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
124 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
125 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
131 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
132 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
133 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
134 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
135 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
136 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
137 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
138 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
139 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
140 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
141 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
142 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
143 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
144 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
145 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
146 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
147 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
148 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
149 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.9
Nodule 0
Rhizoplane 12.56
Rhizosphere 85.2
Stem 0
Stem Tuber 0
Unclassified 1.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105242_11448461 3300009176 Unclassified 716
2 Ga0065715_10176820 3300005293 Bacteria 1505
3 Ga0070683_100175305 3300005329 Bacteria 2035
4 Ga0070660_100565578 3300005339 Bacteria 949
5 Ga0070691_10404168 3300005341 Bacteria 770
6 Ga0070687_100611720 3300005343 Bacteria 750
7 Ga0070668_100414194 3300005347 Bacteria 1153
8 Ga0070674_100597804 3300005356 Bacteria 932
9 Ga0070703_10058467 3300005406 Bacteria 1255
10 Ga0070713_100375375 3300005436 Bacteria 1324
11 Ga0070713_100938845 3300005436 Bacteria 833
12 Ga0070678_100344273 3300005456 Bacteria 1280
13 Ga0070685_10522619 3300005466 Bacteria 843
14 Ga0070706_100146173 3300005467 Bacteria 2207
15 Ga0070706_100698926 3300005467 Bacteria 940
16 Ga0070699_100012149 3300005518 Bacteria 7431
17 Ga0070684_100271376 3300005535 Bacteria 1553
18 Ga0070697_100099886 3300005536 Bacteria 2409
19 Ga0070672_100771144 3300005543 Bacteria 845
20 Ga0070686_100319703 3300005544 Bacteria 1157
21 Ga0070664_100781306 3300005564 Bacteria 892
22 Ga0068866_10313022 3300005718 Bacteria 985
23 Ga0068866_10549348 3300005718 Bacteria 772
24 Ga0081455_10059320 3300005937 Bacteria 3232
25 Ga0081455_10079125 3300005937 Bacteria 2700
26 Ga0081539_10029534 3300005985 Bacteria 3423
27 Ga0075363_100015959 3300006048 Bacteria 3703
28 Ga0070712_100145758 3300006175 Bacteria 1812
29 Ga0075428_100108464 3300006844 Bacteria 3026
30 Ga0075428_100461104 3300006844 Bacteria 1361
31 Ga0075430_100318071 3300006846 Bacteria 1287
32 Ga0075430_100848647 3300006846 Bacteria 753
33 Ga0075431_100028894 3300006847 Bacteria 5702
34 Ga0075431_100073625 3300006847 Bacteria 3524
35 Ga0075431_100103643 3300006847 Bacteria 2936
36 Ga0075431_100612338 3300006847 Bacteria 1072
37 Ga0075433_10003693 3300006852 Bacteria 11840
38 Ga0075434_100002759 3300006871 Bacteria 15532
39 Ga0075434_100108102 3300006871 Bacteria 2792
40 Ga0075429_100011182 3300006880 Bacteria 7770
41 Ga0075436_100188783 3300006914 Bacteria 1458
42 Ga0075435_100002116 3300007076 Bacteria 13071
43 Ga0105240_11453899 3300009093 Bacteria 719
44 Ga0105245_10004653 3300009098 Bacteria 12125
45 Ga0105247_10242408 3300009101 Bacteria 1229
46 Ga0105247_11045596 3300009101 Bacteria 641
47 Ga0114129_10040091 3300009147 Bacteria 6603
48 Ga0114129_10229154 3300009147 Bacteria 2503
49 Ga0114129_10297714 3300009147 Bacteria 2151
50 Ga0114129_10566387 3300009147 Bacteria 1476
51 Ga0114129_10804921 3300009147 Bacteria 1198
52 Ga0114129_11603605 3300009147 Bacteria 797
53 Ga0105243_10117547 3300009148 Bacteria 2236
54 Ga0105242_10282954 3300009176 Bacteria 1507
55 Ga0105242_11344079 3300009176 Bacteria 740
56 Ga0105249_10115751 3300009553 Bacteria 2541
57 Ga0105249_10963102 3300009553 Bacteria 921
58 Ga0105249_11394780 3300009553 Bacteria 773
59 Ga0105239_10380067 3300010375 Bacteria 1597
60 Ga0105246_10378227 3300011119 Bacteria 1169
61 Ga0157378_12118101 3300013297 Bacteria 613
62 Ga0163162_11545040 3300013306 Bacteria 756
63 Ga0157375_12485630 3300013308 Bacteria 618
64 Ga0157379_10934512 3300014968 Bacteria 824
65 Ga0163161_10455427 3300017792 Bacteria 1035
66 Ga0213876_10048520 3300021384 Bacteria 2243
67 Ga0207642_10572803 3300025899 Bacteria 700
68 Ga0207645_10263930 3300025907 Bacteria 1141
69 Ga0207705_10753196 3300025909 Bacteria 757
70 Ga0207687_10232117 3300025927 Bacteria 1458
71 Ga0207687_10631351 3300025927 Bacteria 905
72 Ga0207687_10967554 3300025927 Bacteria 729
73 Ga0207700_10682868 3300025928 Bacteria 916
74 Ga0207709_10307878 3300025935 Bacteria 1181
75 Ga0207709_10910561 3300025935 Bacteria 715
76 Ga0207669_10978026 3300025937 Bacteria 710
77 Ga0207691_10639115 3300025940 Bacteria 899
78 Ga0207711_10274136 3300025941 Bacteria 1553
79 Ga0207689_10704325 3300025942 Bacteria 852
80 Ga0207661_10187647 3300025944 Bacteria 1811
81 Ga0207661_10357563 3300025944 Bacteria 1319
82 Ga0207677_10696944 3300026023 Bacteria 901
83 Ga0207708_10482733 3300026075 Bacteria 1036
84 Ga0207702_11513186 3300026078 Unclassified 665
85 Ga0207641_11432493 3300026088 Bacteria 692
86 Ga0207648_10772456 3300026089 Bacteria 893
87 Ga0207675_100673068 3300026118 Bacteria 1042
88 Ga0207683_10235253 3300026121 Bacteria 1671
89 Ga0207428_10339069 3300027907 Bacteria 1107
90 Ga0268264_10942769 3300028381 Bacteria 868
91 Ga0265334_10006052 3300028573 Bacteria 5252
92 Ga0265338_10000404 3300028800 Bacteria 77425
93 Ga0265338_10183690 3300028800 Bacteria 1592
94 Ga0265325_10002389 3300031241 Bacteria 12687
95 Ga0265339_10017183 3300031249 Bacteria 4288
96 Ga0265327_10005726 3300031251 Bacteria 10247
97 Ga0265327_10061011 3300031251 Bacteria 1926
98 Ga0265327_10069057 3300031251 Bacteria 1775
99 Ga0265327_10246908 3300031251 Bacteria 796
100 Ga0265316_10046252 3300031344 Bacteria 3449
101 Ga0265313_10000776 3300031595 Bacteria 32397
102 Ga0265314_10027795 3300031711 Bacteria 4229
103 Ga0265314_10239413 3300031711 Bacteria 1048
104 Ga0373946_0267298 3300035171 Unclassified 838
105 Ga0373924_0067676 3300035410 Bacteria 1503
106 Ga0373935_0084983 3300035692 Bacteria 2062
107 Ga0373947_0048263 3300035725 Bacteria 2554
108 Ga0373947_0569662 3300035725 Bacteria 771
109 Ga0373925_0081015 3300037068 Bacteria 2468
110 Ga0373925_0521755 3300037068 Bacteria 976
111 Ga0436365_0991611 3300039437 Bacteria 1096
112 Ga0451843_1368737 3300041509 Bacteria 791
113 Ga0466967_0541101 3300045976 Bacteria 1146
114 Ga0495629_0083275 3300046459 Bacteria 2233
115 Ga0495629_0187785 3300046459 Bacteria 1431
116 Ga0495653_0097022 3300046463 Bacteria 2142
117 Ga0495584_0199394 3300046491 Bacteria 1017
118 Ga0495585_0240840 3300046492 Bacteria 906
119 Ga0495583_0110032 3300046506 Bacteria 1168
120 Ga0495608_0060128 3300046511 Bacteria 2501
121 Ga0495608_0071653 3300046511 Bacteria 2261
122 Ga0495618_0086199 3300046514 Bacteria 2008
123 Ga0495628_0001306 3300046516 Bacteria 22874
124 Ga0495628_0015656 3300046516 Bacteria 6332
125 Ga0495630_0051849 3300046517 Bacteria 3071
126 Ga0495630_0069749 3300046517 Bacteria 2645
127 Ga0495630_0102338 3300046517 Bacteria 2167
128 Ga0495630_0129064 3300046517 Bacteria 1919
129 Ga0495630_0537727 3300046517 Bacteria 896
130 Ga0495663_0036774 3300046525 Bacteria 1475
131 Ga0495665_0201027 3300046531 Bacteria 1033
132 Ga0495640_0053723 3300046533 Bacteria 2761
133 Ga0495586_0118536 3300046535 Bacteria 1477
134 Ga0495622_0182309 3300046557 Bacteria 941
135 Ga0495634_0144872 3300046642 Bacteria 1506
136 Ga0495634_0166645 3300046642 Bacteria 1386
137 Ga0495634_0327063 3300046642 Bacteria 922
138 Ga0495635_0583951 3300046663 Bacteria 731
139 Ga0495657_0198068 3300046675 Bacteria 1225
140 Ga0495599_0082651 3300046678 Bacteria 2006
141 Ga0495658_0043749 3300046683 Bacteria 2506
142 Ga0495613_0026925 3300046689 Bacteria 4281
143 Ga0495613_0104787 3300046689 Bacteria 2042
144 Ga0495613_0210399 3300046689 Bacteria 1368
145 Ga0495624_0093675 3300046690 Bacteria 1852
146 Ga0495624_0321482 3300046690 Bacteria 932
147 Ga0495670_0081109 3300046691 Bacteria 1653
148 Ga0495600_0150183 3300046809 Bacteria 1509
149 Ga0495674_0020587 3300047319 Bacteria 6106
150 Ga0495674_0371745 3300047319 Bacteria 1158
151 Ga0495676_0110913 3300047321 Bacteria 2013
152 Ga0495680_0234288 3300047322 Bacteria 1306
153 Ga0495681_0191094 3300047470 Bacteria 836
154 Ga0495684_0014360 3300047471 Bacteria 6094
155 Ga0495684_0249004 3300047471 Bacteria 1293
156 Ga0496100_0500298 3300048903 Bacteria 936
157 Ga0496101_0046390 3300048904 Bacteria 3116
158 Ga0496101_0443752 3300048904 Bacteria 1024
159 Ga0496102_0010928 3300048905 Bacteria 7820
160 Ga0496102_0382334 3300048905 Bacteria 1325
161 Ga0496104_0037403 3300048907 Bacteria 4539
162 Ga0496104_0048016 3300048907 Bacteria 4025
163 Ga0496104_0742017 3300048907 Bacteria 889
164 Ga0496105_0093210 3300048908 Bacteria 2487
165 Ga0496106_0428988 3300048909 Bacteria 1062
166 Ga0496106_0568080 3300048909 Bacteria 910
167 Ga0496107_0013675 3300048910 Bacteria 5675
168 Ga0496108_0218042 3300048911 Bacteria 1657
169 Ga0496109_0068144 3300048912 Bacteria 3262
170 Ga0496109_0420977 3300048912 Bacteria 1262
171 Ga0496109_1027004 3300048912 Bacteria 762
172 Ga0496110_0196531 3300048913 Bacteria 1832
173 Ga0496110_0689370 3300048913 Bacteria 923
174 Ga0496112_0002219 3300048915 Bacteria 15490
175 Ga0496112_0017598 3300048915 Bacteria 6720
176 Ga0496112_0152021 3300048915 Bacteria 2282
177 Ga0496112_0185654 3300048915 Bacteria 2043
178 Ga0496113_0357721 3300048916 Bacteria 1171
179 Ga0496113_0747319 3300048916 Bacteria 779
180 Ga0496114_0021641 3300048917 Bacteria 5233
181 Ga0496114_1281210 3300048917 Bacteria 620
182 Ga0496115_0007334 3300048918 Bacteria 8111
183 Ga0496115_0423030 3300048918 Bacteria 1079
184 Ga0501034_0017424 3300049571 Bacteria 7366
185 Ga0501036_0047071 3300049572 Bacteria 3653
186 Ga0501037_0022553 3300049573 Bacteria 4657
187 Ga0501046_0025061 3300049580 Bacteria 4886
188 Ga0501047_0068442 3300049581 Bacteria 3419
189 Ga0501068_0048046 3300049584 Bacteria 2576
190 Ga0501070_0095577 3300049586 Bacteria 2458
191 Ga0501071_0271681 3300049587 Bacteria 1282
192 Ga0501073_0115252 3300049589 Bacteria 1863
193 Ga0501077_0455799 3300049593 Bacteria 819
194 Ga0501081_0444661 3300049743 Bacteria 963
195 nmdc:mga03n38_21535_c1 3300050490 Bacteria 2596
196 nmdc:mga05p37_1579745_c1 3300050507 Bacteria 648
197 nmdc:mga05p37_216574_c1 3300050507 Bacteria 2313
198 nmdc:mga05p37_279721_c1 3300050507 Bacteria 1990
199 nmdc:mga05p37_31750_c1 3300050507 Bacteria 6455
200 nmdc:mga09592_3245_c1 3300050508 Bacteria 13155
201 nmdc:mga0qj67_348537_c1 3300050509 Bacteria 1197
202 nmdc:mga0qj67_808909_c1 3300050509 Bacteria 742
203 nmdc:mga06r32_158959_c1 3300050510 Bacteria 2242
204 nmdc:mga06r32_17902_c1 3300050510 Bacteria 6477
205 nmdc:mga0n895_171112_c1 3300050512 Bacteria 2204
206 nmdc:mga0n895_29136_c1 3300050512 Bacteria 5261
207 nmdc:mga0rr50_2598_c1 3300050513 Bacteria 10234
208 nmdc:mga08x19_12713_c1 3300050514 Bacteria 5077
209 nmdc:mga0a205_2915_c1 3300050515 Bacteria 15141
210 Ga0495601_0181953 3300053077 Bacteria 1374
211 Ga0495601_0465577 3300053077 Bacteria 817
212 Ga0495595_0033443 3300053084 Bacteria 2320
213 Ga0495595_0118857 3300053084 Bacteria 1287
214 Ga0495595_0132135 3300053084 Bacteria 1221
215 Ga0495619_0013118 3300053085 Bacteria 5222
216 Ga0495619_0053554 3300053085 Bacteria 2669
217 Ga0495619_0080517 3300053085 Bacteria 2192
218 Ga0495619_0094052 3300053085 Bacteria 2033
219 Ga0495619_0108808 3300053085 Bacteria 1892
220 Ga0495619_0129687 3300053085 Bacteria 1732
221 Ga0501082_0309035 3300060353 Bacteria 1377
222 Ga0501082_0463419 3300060353 Bacteria 1108
223 Ga0530510_0429079 3300061734 Bacteria 998
224 Ga0105242_11448461
225 Ga0065715_10176820
226 Ga0070683_100175305
227 Ga0070660_100565578
228 Ga0070691_10404168
229 Ga0070687_100611720
230 Ga0070668_100414194
231 Ga0070674_100597804
232 Ga0070703_10058467
233 Ga0070713_100375375
234 Ga0070713_100938845
235 Ga0070678_100344273
236 Ga0070685_10522619
237 Ga0070706_100146173
238 Ga0070706_100698926
239 Ga0070699_100012149
240 Ga0070684_100271376
241 Ga0070697_100099886
242 Ga0070672_100771144
243 Ga0070686_100319703
244 Ga0070664_100781306
245 Ga0068866_10313022
246 Ga0068866_10549348
247 Ga0081455_10059320
248 Ga0081455_10079125
249 Ga0081539_10029534
250 Ga0075363_100015959
251 Ga0070712_100145758
252 Ga0075428_100108464
253 Ga0075428_100461104
254 Ga0075430_100318071
255 Ga0075430_100848647
256 Ga0075431_100028894
257 Ga0075431_100073625
258 Ga0075431_100103643
259 Ga0075431_100612338
260 Ga0075433_10003693
261 Ga0075434_100002759
262 Ga0075434_100108102
263 Ga0075429_100011182
264 Ga0075436_100188783
265 Ga0075435_100002116
266 Ga0105240_11453899
267 Ga0105245_10004653
268 Ga0105247_10242408
269 Ga0105247_11045596
270 Ga0114129_10040091
271 Ga0114129_10229154
272 Ga0114129_10297714
273 Ga0114129_10566387
274 Ga0114129_10804921
275 Ga0114129_11603605
276 Ga0105243_10117547
277 Ga0105242_10282954
278 Ga0105242_11344079
279 Ga0105249_10115751
280 Ga0105249_10963102
281 Ga0105249_11394780
282 Ga0105239_10380067
283 Ga0105246_10378227
284 Ga0157378_12118101
285 Ga0163162_11545040
286 Ga0157375_12485630
287 Ga0157379_10934512
288 Ga0163161_10455427
289 Ga0213876_10048520
290 Ga0207642_10572803
291 Ga0207645_10263930
292 Ga0207705_10753196
293 Ga0207687_10232117
294 Ga0207687_10631351
295 Ga0207687_10967554
296 Ga0207700_10682868
297 Ga0207709_10307878
298 Ga0207709_10910561
299 Ga0207669_10978026
300 Ga0207691_10639115
301 Ga0207711_10274136
302 Ga0207689_10704325
303 Ga0207661_10187647
304 Ga0207661_10357563
305 Ga0207677_10696944
306 Ga0207708_10482733
307 Ga0207702_11513186
308 Ga0207641_11432493
309 Ga0207648_10772456
310 Ga0207675_100673068
311 Ga0207683_10235253
312 Ga0207428_10339069
313 Ga0268264_10942769
314 Ga0265334_10006052
315 Ga0265338_10000404
316 Ga0265338_10183690
317 Ga0265325_10002389
318 Ga0265339_10017183
319 Ga0265327_10005726
320 Ga0265327_10061011
321 Ga0265327_10069057
322 Ga0265327_10246908
323 Ga0265316_10046252
324 Ga0265313_10000776
325 Ga0265314_10027795
326 Ga0265314_10239413
327 Ga0373946_0267298
328 Ga0373924_0067676
329 Ga0373935_0084983
330 Ga0373947_0048263
331 Ga0373947_0569662
332 Ga0373925_0081015
333 Ga0373925_0521755
334 Ga0436365_0991611
335 Ga0451843_1368737
336 Ga0466967_0541101
337 Ga0495629_0083275
338 Ga0495629_0187785
339 Ga0495653_0097022
340 Ga0495584_0199394
341 Ga0495585_0240840
342 Ga0495583_0110032
343 Ga0495608_0060128
344 Ga0495608_0071653
345 Ga0495618_0086199
346 Ga0495628_0001306
347 Ga0495628_0015656
348 Ga0495630_0051849
349 Ga0495630_0069749
350 Ga0495630_0102338
351 Ga0495630_0129064
352 Ga0495630_0537727
353 Ga0495663_0036774
354 Ga0495665_0201027
355 Ga0495640_0053723
356 Ga0495586_0118536
357 Ga0495622_0182309
358 Ga0495634_0144872
359 Ga0495634_0166645
360 Ga0495634_0327063
361 Ga0495635_0583951
362 Ga0495657_0198068
363 Ga0495599_0082651
364 Ga0495658_0043749
365 Ga0495613_0026925
366 Ga0495613_0104787
367 Ga0495613_0210399
368 Ga0495624_0093675
369 Ga0495624_0321482
370 Ga0495670_0081109
371 Ga0495600_0150183
372 Ga0495674_0020587
373 Ga0495674_0371745
374 Ga0495676_0110913
375 Ga0495680_0234288
376 Ga0495681_0191094
377 Ga0495684_0014360
378 Ga0495684_0249004
379 Ga0496100_0500298
380 Ga0496101_0046390
381 Ga0496101_0443752
382 Ga0496102_0010928
383 Ga0496102_0382334
384 Ga0496104_0037403
385 Ga0496104_0048016
386 Ga0496104_0742017
387 Ga0496105_0093210
388 Ga0496106_0428988
389 Ga0496106_0568080
390 Ga0496107_0013675
391 Ga0496108_0218042
392 Ga0496109_0068144
393 Ga0496109_0420977
394 Ga0496109_1027004
395 Ga0496110_0196531
396 Ga0496110_0689370
397 Ga0496112_0002219
398 Ga0496112_0017598
399 Ga0496112_0152021
400 Ga0496112_0185654
401 Ga0496113_0357721
402 Ga0496113_0747319
403 Ga0496114_0021641
404 Ga0496114_1281210
405 Ga0496115_0007334
406 Ga0496115_0423030
407 Ga0501034_0017424
408 Ga0501036_0047071
409 Ga0501037_0022553
410 Ga0501046_0025061
411 Ga0501047_0068442
412 Ga0501068_0048046
413 Ga0501070_0095577
414 Ga0501071_0271681
415 Ga0501073_0115252
416 Ga0501077_0455799
417 Ga0501081_0444661
418 nmdc:mga03n38_21535_c1
419 nmdc:mga05p37_1579745_c1
420 nmdc:mga05p37_216574_c1
421 nmdc:mga05p37_279721_c1
422 nmdc:mga05p37_31750_c1
423 nmdc:mga09592_3245_c1
424 nmdc:mga0qj67_348537_c1
425 nmdc:mga0qj67_808909_c1
426 nmdc:mga06r32_158959_c1
427 nmdc:mga06r32_17902_c1
428 nmdc:mga0n895_171112_c1
429 nmdc:mga0n895_29136_c1
430 nmdc:mga0rr50_2598_c1
431 nmdc:mga08x19_12713_c1
432 nmdc:mga0a205_2915_c1
433 Ga0495601_0181953
434 Ga0495601_0465577
435 Ga0495595_0033443
436 Ga0495595_0118857
437 Ga0495595_0132135
438 Ga0495619_0013118
439 Ga0495619_0053554
440 Ga0495619_0080517
441 Ga0495619_0094052
442 Ga0495619_0108808
443 Ga0495619_0129687
444 Ga0501082_0309035
445 Ga0501082_0463419
446 Ga0530510_0429079

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00329

Complex1_30kDa

Respiratory-chain NADH dehydrogenase, 30 Kd subunit

53

188

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
8e73-assembly1.cif.gz_S3 vigna radiata supercomplex i+iii2 (full bridge) 0.9243 35 169
3mcr-assembly1.cif.gz_A crystal structure of nadh dehydrogenase subunit c (tfu_2693) from thermobifida fusca yx-er1 at 2.65 a resolution 0.9215 36 153
7a24-assembly1.cif.gz_F assembly intermediate of the plant mitochondrial complex i 0.9173 35 169
7p7j-assembly1.cif.gz_C complex i from e. coli, ddm/lmng-purified, with dq, open state 0.9099 25 169
7p7k-assembly1.cif.gz_C complex i from e. coli, ddm/lmng-purified, with dq, resting state 0.9092 25 169
ID Description Score Start End Superfamily
af_A0A2P2CLF6_6_131_3.30.460.80 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;NADH:ubiquinone oxidoreductase Nqo5 subunit 0.9222 35 154 3.30.460.80
af_A0A1D8PJ73_47_194_3.30.460.80 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;NADH:ubiquinone oxidoreductase Nqo5 subunit 0.8801 24 154 3.30.460.80
af_Q10884_4_103_3.30.460.80 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;NADH:ubiquinone oxidoreductase Nqo5 subunit 0.8765 44 154 3.30.460.80
af_P22237_2_142_3.30.460.80 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;NADH:ubiquinone oxidoreductase Nqo5 subunit 0.8718 25 154 3.30.460.80
5b3qA00 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;NADH:ubiquinone oxidoreductase Nqo5 subunit 0.8542 25 152 3.30.460.80
ID Description Score Start End GO Terms
AF-A0A537YIL3-F1-model_v4 NADH:ubiquinone oxidoreductase 30kDa subunit domain-containing protein 0.9953 24 135 GO:0008137
AF-A0A536SVD3-F1-model_v4 NADH-quinone oxidoreductase subunit C 0.9597 46 169 GO:0008137
AF-A0A351DEI5-F1-model_v4 NADH:ubiquinone oxidoreductase 30kDa subunit domain-containing protein 0.9588 36 151 GO:0008137
AF-A0A257U6G5-F1-model_v4 NADH-quinone oxidoreductase subunit C (EC 7.1.1.-) (NADH dehydrogenase I subunit C) (NDH-1 subunit C) 0.956 47 169 GO:0005886
GO:0008137
GO:0048038
GO:0050136
AF-A0A3M1SDS9-F1-model_v4 NADH-quinone oxidoreductase subunit C (EC 7.1.1.-) (NADH dehydrogenase I subunit C) (NDH-1 subunit C) 0.9549 25 169 GO:0005886
GO:0008137
GO:0048038
GO:0050136

Map