F335386

General Info

Members Datasets Scaffolds Average Seq Length
223 139 446 255

Family's Representative Sequence

Representative Sequence 3300005614|Ga0068856_100027680|Ga0068856_1000276803
Length 238
Sequence MKKTTEIDSVTPSIIIEKLCKRFGDHVVLQDFSLTVQKEENVVVLGKSGSGKSVLIKCIIGLLKPDCGNIQVFGENVPQLEHDQLDQVRARIGFLFQGNALYDSMTVRENLEFPLRRHWFDHSQQQVDALVIEALENVGLAHTVDLMPEELSGGMLKIILYDEPTTGLDPVTAREIDNLILKLQKKYHTSSIIITHDMNCVKNTADRVALLLDGRCYAQGTYEDFEHSADPNIHQFFE

Samples

Sample ID Description Type Environment
1 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
7 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
8 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
59 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
91 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
92 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
93 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
94 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
95 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
96 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
97 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
98 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
99 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
100 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
101 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
102 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
103 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
104 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
105 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
106 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
107 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
108 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
109 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
110 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
111 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
112 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
113 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
114 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
115 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
122 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
123 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
124 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
125 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
127 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
128 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
129 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
130 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
131 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
132 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
133 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
134 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
135 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
136 2738543023 Pedobacter sp. OK628 Isolate Unclassified
137 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
138 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
139 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.21
Metatranscriptomes 0
Isolates 1.79

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.93
Nodule 0
Rhizoplane 0
Rhizosphere 87.89
Stem 0
Stem Tuber 0
Unclassified 6.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068856_100027680 3300005614 Bacteria 5531
2 rootH1_10095269 3300003316 Bacteria 8902
3 rootH2_10000256 3300003320 Bacteria 54479
4 rootH2_10004568 3300003320 Bacteria 60983
5 rootH2_10020890 3300003320 Bacteria 2427
6 rootH2_10151464 3300003320 Bacteria 3469
7 rootH2_10268154 3300003320 Bacteria 1195
8 rootH2_10287454 3300003320 Bacteria 1359
9 rootL2_10041335 3300003322 Bacteria 5599
10 rootL2_10316265 3300003322 Bacteria 1703
11 rootH1_10267019 3300003323 Bacteria 3586
12 rootH1_10324871 3300003323 Unclassified 2467
13 rootH1_10388304 3300003323 Bacteria 1304
14 Ga0055529_1007197 3300003763 Bacteria 1523
15 Ga0055531_10000033 3300003794 Bacteria 152935
16 Ga0065714_10129888 3300005288 Bacteria 1260
17 Ga0070676_10097701 3300005328 Bacteria 1809
18 Ga0068869_100013604 3300005334 Bacteria 5416
19 Ga0070666_10000583 3300005335 Bacteria 22014
20 Ga0068868_100103170 3300005338 Bacteria 2310
21 Ga0070660_100054052 3300005339 Bacteria 3099
22 Ga0070673_100227179 3300005364 Bacteria 1618
23 Ga0070659_100000352 3300005366 Bacteria 35096
24 Ga0070667_100015504 3300005367 Bacteria 6300
25 Ga0070713_100047531 3300005436 Bacteria 3528
26 Ga0070698_100160157 3300005471 Bacteria 2195
27 Ga0070684_100066427 3300005535 Bacteria 3166
28 Ga0068853_100154008 3300005539 Unclassified 2070
29 Ga0068853_100207930 3300005539 Bacteria 1783
30 Ga0068853_100457222 3300005539 Bacteria 1201
31 Ga0070672_100018184 3300005543 Bacteria 5075
32 Ga0070665_100000008 3300005548 Bacteria 606341
33 Ga0070665_100008074 3300005548 Bacteria 10656
34 Ga0068855_100000152 3300005563 Bacteria 87996
35 Ga0068855_100001942 3300005563 Bacteria 25664
36 Ga0068855_100011309 3300005563 Bacteria 10777
37 Ga0068855_100051774 3300005563 Bacteria 4836
38 Ga0068855_100948572 3300005563 Bacteria 906
39 Ga0068857_100003869 3300005577 Bacteria 12606
40 Ga0068857_100263728 3300005577 Bacteria 1582
41 Ga0068857_100394308 3300005577 Bacteria 1287
42 Ga0068854_100150826 3300005578 Bacteria 1792
43 Ga0068854_100315818 3300005578 Bacteria 1268
44 Ga0068856_100000224 3300005614 Bacteria 61427
45 Ga0068856_100020088 3300005614 Bacteria 6487
46 Ga0068856_100040589 3300005614 Bacteria 4572
47 Ga0068856_100084247 3300005614 Bacteria 3158
48 Ga0068856_100089468 3300005614 Bacteria 3062
49 Ga0068856_100122780 3300005614 Bacteria 2600
50 Ga0068852_100014321 3300005616 Bacteria 6100
51 Ga0068852_100053026 3300005616 Bacteria 3489
52 Ga0068859_100000041 3300005617 Bacteria 162415
53 Ga0068864_100031625 3300005618 Bacteria 4492
54 Ga0068864_100501877 3300005618 Unclassified 1167
55 Ga0068863_100003110 3300005841 Bacteria 16378
56 Ga0068858_100190829 3300005842 Bacteria 1936
57 Ga0068860_100012286 3300005843 Bacteria 8438
58 Ga0068862_100086168 3300005844 Bacteria 2730
59 Ga0075366_10076148 3300006195 Bacteria 2002
60 Ga0097621_100096477 3300006237 Bacteria 2481
61 Ga0068871_100363626 3300006358 Bacteria 1282
62 Ga0075428_100021911 3300006844 Bacteria 7075
63 Ga0075429_100057304 3300006880 Bacteria 3392
64 Ga0097620_100000041 3300006931 Bacteria 162415
65 Ga0105240_10000054 3300009093 Bacteria 225529
66 Ga0105240_10000304 3300009093 Bacteria 95162
67 Ga0105240_10110800 3300009093 Bacteria 3322
68 Ga0105240_10155002 3300009093 Bacteria 2725
69 Ga0105240_10235983 3300009093 Unclassified 2122
70 Ga0105240_10376345 3300009093 Bacteria 1604
71 Ga0105245_10082249 3300009098 Bacteria 2946
72 Ga0114129_10012202 3300009147 Bacteria 12227
73 Ga0114129_10251393 3300009147 Bacteria 2373
74 Ga0105241_10000706 3300009174 Bacteria 25262
75 Ga0105241_10075684 3300009174 Bacteria 2623
76 Ga0105241_10082644 3300009174 Bacteria 2518
77 Ga0105237_10002453 3300009545 Bacteria 23025
78 Ga0105237_10003076 3300009545 Bacteria 20107
79 Ga0105237_10008496 3300009545 Bacteria 11110
80 Ga0105237_10021652 3300009545 Bacteria 6608
81 Ga0105237_10022692 3300009545 Bacteria 6439
82 Ga0105237_10035434 3300009545 Bacteria 5050
83 Ga0105237_10039730 3300009545 Bacteria 4749
84 Ga0105237_10061834 3300009545 Unclassified 3743
85 Ga0105237_10249355 3300009545 Bacteria 1777
86 Ga0105238_10011389 3300009551 Bacteria 8955
87 Ga0105249_10003956 3300009553 Bacteria 12788
88 Ga0105249_10006825 3300009553 Bacteria 9954
89 Ga0105239_10004423 3300010375 Bacteria 16811
90 Ga0105239_10006489 3300010375 Bacteria 13565
91 Ga0105239_10228670 3300010375 Bacteria 2087
92 Ga0105246_10014723 3300011119 Bacteria 4924
93 Ga0157371_10002747 3300013102 Bacteria 16547
94 Ga0157371_10007181 3300013102 Bacteria 9048
95 Ga0157370_10243501 3300013104 Bacteria 1664
96 Ga0157374_10000003 3300013296 Bacteria 854471
97 Ga0163162_10000409 3300013306 Bacteria 39406
98 Ga0163162_10001878 3300013306 Bacteria 19784
99 Ga0163162_10617704 3300013306 Bacteria 1209
100 Ga0157372_10002190 3300013307 Bacteria 21255
101 Ga0157372_10052084 3300013307 Bacteria 4557
102 Ga0157372_10101050 3300013307 Bacteria 3292
103 Ga0157372_10180426 3300013307 Bacteria 2444
104 Ga0157375_10065647 3300013308 Bacteria 3618
105 Ga0163163_10009370 3300014325 Bacteria 8739
106 Ga0182008_10070656 3300014497 Unclassified 1717
107 Ga0157379_10047919 3300014968 Bacteria 3814
108 Ga0157376_10158117 3300014969 Bacteria 2051
109 Ga0209646_1001027 3300025246 Bacteria 8447
110 Ga0209455_1009236 3300025272 Bacteria 2605
111 Ga0209257_1000023 3300025304 Bacteria 753019
112 Ga0207680_10001626 3300025903 Bacteria 10628
113 Ga0207680_10230082 3300025903 Unclassified 1274
114 Ga0207647_10002070 3300025904 Bacteria 15333
115 Ga0207647_10337496 3300025904 Bacteria 854
116 Ga0207654_10001382 3300025911 Bacteria 12858
117 Ga0207654_10031152 3300025911 Unclassified 2935
118 Ga0207695_10000043 3300025913 Bacteria 444585
119 Ga0207695_10000412 3300025913 Bacteria 95172
120 Ga0207695_10009762 3300025913 Bacteria 11808
121 Ga0207695_10011786 3300025913 Bacteria 10554
122 Ga0207695_10017187 3300025913 Bacteria 8429
123 Ga0207695_10304809 3300025913 Bacteria 1484
124 Ga0207671_10000248 3300025914 Bacteria 80829
125 Ga0207671_10003737 3300025914 Bacteria 14998
126 Ga0207671_10004293 3300025914 Bacteria 13709
127 Ga0207671_10005426 3300025914 Bacteria 11741
128 Ga0207671_10005727 3300025914 Bacteria 11328
129 Ga0207671_10170790 3300025914 Bacteria 1688
130 Ga0207657_10061201 3300025919 Bacteria 3229
131 Ga0207694_10032738 3300025924 Unclassified 3980
132 Ga0207650_10040773 3300025925 Unclassified 3400
133 Ga0207650_10184590 3300025925 Bacteria 1664
134 Ga0207664_10059218 3300025929 Bacteria 3049
135 Ga0207690_10001264 3300025932 Bacteria 16001
136 Ga0207669_10046953 3300025937 Unclassified 2555
137 Ga0207691_10067924 3300025940 Bacteria 3221
138 Ga0207689_10000684 3300025942 Bacteria 32357
139 Ga0207661_10300936 3300025944 Bacteria 1438
140 Ga0207667_10000009 3300025949 Bacteria 603135
141 Ga0207667_10009293 3300025949 Bacteria 11596
142 Ga0207667_10017116 3300025949 Bacteria 8172
143 Ga0207667_10127675 3300025949 Bacteria 2619
144 Ga0207651_10064468 3300025960 Bacteria 2565
145 Ga0207712_10002569 3300025961 Bacteria 11670
146 Ga0207640_10122157 3300025981 Bacteria 1868
147 Ga0207640_10214857 3300025981 Unclassified 1468
148 Ga0207677_10076679 3300026023 Bacteria 2381
149 Ga0207703_10011021 3300026035 Bacteria 7044
150 Ga0207639_10076970 3300026041 Bacteria 2628
151 Ga0207639_10882788 3300026041 Bacteria 835
152 Ga0207702_10000223 3300026078 Bacteria 66194
153 Ga0207702_10026479 3300026078 Bacteria 4814
154 Ga0207702_10150602 3300026078 Bacteria 2116
155 Ga0207702_10323364 3300026078 Bacteria 1469
156 Ga0207641_10000369 3300026088 Bacteria 53464
157 Ga0207676_10050111 3300026095 Bacteria 3253
158 Ga0207676_10456614 3300026095 Unclassified 1205
159 Ga0207674_10007074 3300026116 Bacteria 13108
160 Ga0207674_10252287 3300026116 Bacteria 1711
161 Ga0207698_10045823 3300026142 Bacteria 3297
162 Ga0207698_10089325 3300026142 Bacteria 2516
163 Ga0268266_10000016 3300028379 Bacteria 629101
164 Ga0268266_10003330 3300028379 Bacteria 16098
165 Ga0268265_10096047 3300028380 Bacteria 2381
166 Ga0268264_10017331 3300028381 Bacteria 5902
167 Ga0307517_10002012 3300028786 Bacteria 33092
168 Ga0265327_10119815 3300031251 Bacteria 1248
169 Ga0307509_10196698 3300031507 Bacteria 1859
170 Ga0307413_10134184 3300031824 Bacteria 1699
171 Ga0307412_10053613 3300031911 Bacteria 2674
172 Ga0307409_100240504 3300031995 Bacteria 1648
173 Ga0307411_10280114 3300032005 Bacteria 1327
174 Ga0373925_0103952 3300037068 Bacteria 2187
175 Ga0395905_0000652 3300037471 Bacteria 46135
176 Ga0395905_0414256 3300037471 Bacteria 1243
177 Ga0439457_002836 3300042014 Bacteria 4841
178 Ga0466972_0000063 3300044658 Bacteria 105889
179 Ga0453683_0228009 3300044673 Bacteria 1185
180 Ga0453684_0077282 3300044712 Bacteria 4175
181 Ga0453684_0097178 3300044712 Bacteria 3615
182 Ga0453684_0224433 3300044712 Bacteria 2174
183 Ga0453684_0518308 3300044712 Bacteria 1318
184 Ga0466957_0006772 3300044842 Bacteria 6474
185 Ga0495585_0002626 3300046492 Bacteria 12657
186 Ga0495648_0028407 3300046524 Bacteria 3726
187 Ga0495652_0101826 3300046529 Bacteria 2328
188 Ga0495654_0213206 3300046530 Bacteria 820
189 Ga0495609_0017009 3300046538 Bacteria 3383
190 Ga0495622_0025189 3300046557 Bacteria 2778
191 Ga0495668_0000003 3300046616 Bacteria 695023
192 Ga0495625_0000607 3300046660 Bacteria 52064
193 Ga0495658_0070588 3300046683 Bacteria 2027
194 Ga0495636_0000013 3300047318 Bacteria 85265
195 Ga0495614_0027058 3300048089 Bacteria 2473
196 Ga0501032_0012415 3300049569 Bacteria 6087
197 Ga0501034_0005294 3300049571 Bacteria 14147
198 Ga0501043_0004679 3300049579 Bacteria 11095
199 Ga0501046_0001390 3300049580 Bacteria 23300
200 Ga0501047_0004353 3300049581 Bacteria 13319
201 Ga0501048_0014597 3300049582 Bacteria 5815
202 Ga0501074_0014458 3300049590 Bacteria 5742
203 Ga0501202_003189 3300049652 Bacteria 2797
204 Ga0501225_0059744 3300049705 Bacteria 1071
205 Ga0501283_007491 3300049779 Bacteria 1556
206 Ga0501035_0002292 3300049822 Bacteria 18903
207 Ga0501035_0044012 3300049822 Bacteria 4022
208 Ga0501044_0015242 3300049823 Bacteria 8279
209 Ga0501044_0016187 3300049823 Bacteria 8015
210 nmdc:mga0k408_38946_c1 3300050493 Bacteria 2729
211 nmdc:mga05p37_11886_c1 3300050507 Bacteria 10380
212 nmdc:mga05p37_634789_c1 3300050507 Bacteria 1199
213 nmdc:mga0qj67_28530_c1 3300050509 Bacteria 4332
214 nmdc:mga06r32_508847_c1 3300050510 Bacteria 1181
215 Ga0500650_0012293 3300053098 Bacteria 3557
216 Ga0500608_021204 3300053122 Bacteria 2999
217 Ga0500588_0052290 3300053146 Unclassified 1278
218 Ga0500636_0032946 3300053177 Bacteria 3068
219 Ga0500637_0220596 3300053178 Bacteria 1072
220 2739300301 2738543023 Bacteria 6767879
221 2852626108 2852623160 Bacteria 4376875
222 2884935421 2884933994 Bacteria 4535041
223 2932083703 2932082852 Bacteria 6563563
224 Ga0068856_100027680
225 rootH1_10095269
226 rootH2_10000256
227 rootH2_10004568
228 rootH2_10020890
229 rootH2_10151464
230 rootH2_10268154
231 rootH2_10287454
232 rootL2_10041335
233 rootL2_10316265
234 rootH1_10267019
235 rootH1_10324871
236 rootH1_10388304
237 Ga0055529_1007197
238 Ga0055531_10000033
239 Ga0065714_10129888
240 Ga0070676_10097701
241 Ga0068869_100013604
242 Ga0070666_10000583
243 Ga0068868_100103170
244 Ga0070660_100054052
245 Ga0070673_100227179
246 Ga0070659_100000352
247 Ga0070667_100015504
248 Ga0070713_100047531
249 Ga0070698_100160157
250 Ga0070684_100066427
251 Ga0068853_100154008
252 Ga0068853_100207930
253 Ga0068853_100457222
254 Ga0070672_100018184
255 Ga0070665_100000008
256 Ga0070665_100008074
257 Ga0068855_100000152
258 Ga0068855_100001942
259 Ga0068855_100011309
260 Ga0068855_100051774
261 Ga0068855_100948572
262 Ga0068857_100003869
263 Ga0068857_100263728
264 Ga0068857_100394308
265 Ga0068854_100150826
266 Ga0068854_100315818
267 Ga0068856_100000224
268 Ga0068856_100020088
269 Ga0068856_100040589
270 Ga0068856_100084247
271 Ga0068856_100089468
272 Ga0068856_100122780
273 Ga0068852_100014321
274 Ga0068852_100053026
275 Ga0068859_100000041
276 Ga0068864_100031625
277 Ga0068864_100501877
278 Ga0068863_100003110
279 Ga0068858_100190829
280 Ga0068860_100012286
281 Ga0068862_100086168
282 Ga0075366_10076148
283 Ga0097621_100096477
284 Ga0068871_100363626
285 Ga0075428_100021911
286 Ga0075429_100057304
287 Ga0097620_100000041
288 Ga0105240_10000054
289 Ga0105240_10000304
290 Ga0105240_10110800
291 Ga0105240_10155002
292 Ga0105240_10235983
293 Ga0105240_10376345
294 Ga0105245_10082249
295 Ga0114129_10012202
296 Ga0114129_10251393
297 Ga0105241_10000706
298 Ga0105241_10075684
299 Ga0105241_10082644
300 Ga0105237_10002453
301 Ga0105237_10003076
302 Ga0105237_10008496
303 Ga0105237_10021652
304 Ga0105237_10022692
305 Ga0105237_10035434
306 Ga0105237_10039730
307 Ga0105237_10061834
308 Ga0105237_10249355
309 Ga0105238_10011389
310 Ga0105249_10003956
311 Ga0105249_10006825
312 Ga0105239_10004423
313 Ga0105239_10006489
314 Ga0105239_10228670
315 Ga0105246_10014723
316 Ga0157371_10002747
317 Ga0157371_10007181
318 Ga0157370_10243501
319 Ga0157374_10000003
320 Ga0163162_10000409
321 Ga0163162_10001878
322 Ga0163162_10617704
323 Ga0157372_10002190
324 Ga0157372_10052084
325 Ga0157372_10101050
326 Ga0157372_10180426
327 Ga0157375_10065647
328 Ga0163163_10009370
329 Ga0182008_10070656
330 Ga0157379_10047919
331 Ga0157376_10158117
332 Ga0209646_1001027
333 Ga0209455_1009236
334 Ga0209257_1000023
335 Ga0207680_10001626
336 Ga0207680_10230082
337 Ga0207647_10002070
338 Ga0207647_10337496
339 Ga0207654_10001382
340 Ga0207654_10031152
341 Ga0207695_10000043
342 Ga0207695_10000412
343 Ga0207695_10009762
344 Ga0207695_10011786
345 Ga0207695_10017187
346 Ga0207695_10304809
347 Ga0207671_10000248
348 Ga0207671_10003737
349 Ga0207671_10004293
350 Ga0207671_10005426
351 Ga0207671_10005727
352 Ga0207671_10170790
353 Ga0207657_10061201
354 Ga0207694_10032738
355 Ga0207650_10040773
356 Ga0207650_10184590
357 Ga0207664_10059218
358 Ga0207690_10001264
359 Ga0207669_10046953
360 Ga0207691_10067924
361 Ga0207689_10000684
362 Ga0207661_10300936
363 Ga0207667_10000009
364 Ga0207667_10009293
365 Ga0207667_10017116
366 Ga0207667_10127675
367 Ga0207651_10064468
368 Ga0207712_10002569
369 Ga0207640_10122157
370 Ga0207640_10214857
371 Ga0207677_10076679
372 Ga0207703_10011021
373 Ga0207639_10076970
374 Ga0207639_10882788
375 Ga0207702_10000223
376 Ga0207702_10026479
377 Ga0207702_10150602
378 Ga0207702_10323364
379 Ga0207641_10000369
380 Ga0207676_10050111
381 Ga0207676_10456614
382 Ga0207674_10007074
383 Ga0207674_10252287
384 Ga0207698_10045823
385 Ga0207698_10089325
386 Ga0268266_10000016
387 Ga0268266_10003330
388 Ga0268265_10096047
389 Ga0268264_10017331
390 Ga0307517_10002012
391 Ga0265327_10119815
392 Ga0307509_10196698
393 Ga0307413_10134184
394 Ga0307412_10053613
395 Ga0307409_100240504
396 Ga0307411_10280114
397 Ga0373925_0103952
398 Ga0395905_0000652
399 Ga0395905_0414256
400 Ga0439457_002836
401 Ga0466972_0000063
402 Ga0453683_0228009
403 Ga0453684_0077282
404 Ga0453684_0097178
405 Ga0453684_0224433
406 Ga0453684_0518308
407 Ga0466957_0006772
408 Ga0495585_0002626
409 Ga0495648_0028407
410 Ga0495652_0101826
411 Ga0495654_0213206
412 Ga0495609_0017009
413 Ga0495622_0025189
414 Ga0495668_0000003
415 Ga0495625_0000607
416 Ga0495658_0070588
417 Ga0495636_0000013
418 Ga0495614_0027058
419 Ga0501032_0012415
420 Ga0501034_0005294
421 Ga0501043_0004679
422 Ga0501046_0001390
423 Ga0501047_0004353
424 Ga0501048_0014597
425 Ga0501074_0014458
426 Ga0501202_003189
427 Ga0501225_0059744
428 Ga0501283_007491
429 Ga0501035_0002292
430 Ga0501035_0044012
431 Ga0501044_0015242
432 Ga0501044_0016187
433 nmdc:mga0k408_38946_c1
434 nmdc:mga05p37_11886_c1
435 nmdc:mga05p37_634789_c1
436 nmdc:mga0qj67_28530_c1
437 nmdc:mga06r32_508847_c1
438 Ga0500650_0012293
439 Ga0500608_021204
440 Ga0500588_0052290
441 Ga0500636_0032946
442 Ga0500637_0220596
443 2739300301
444 2852626108
445 2884935421
446 2932083703

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

29

166

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
8fee-assembly1.cif.gz_H structure of mce1 transporter from mycobacterium smegmatis in the absence of lucb (map2) 0.9361 5 245
7ch8-assembly1.cif.gz_J cryo-em structure of p.aeruginosa mlafebd with adp-v 0.9342 5 242
7d06-assembly1.cif.gz_B cryo em structure of the nucleotide free acinetobacter mlafedb complex 0.9308 4 246
4yer-assembly1.cif.gz_A crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.9308 4 233
4u00-assembly1.cif.gz_A crystal structure of ttha1159 in complex with adp 0.9303 6 247
ID Description Score Start End Superfamily
af_P63386_5_251_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9513 5 247 3.40.50.300
af_P9WQL5_26_341_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9434 7 242 3.40.50.300
af_O05779_1_226_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9377 6 227 3.40.50.300
af_P33360_1_239_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9338 7 247 3.40.50.300
af_Q2G089_1_236_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9335 7 242 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3C0VK17-F1-model_v4 ABC transporter ATP-binding protein 0.9592 5 246 GO:0005524
GO:0016887
AF-A0A640P064-F1-model_v4 ABC transporter ATP-binding protein 0.9571 1 246 GO:0005524
GO:0016887
AF-A0A7C6KJ30-F1-model_v4 deleted 0.9545 36 246
AF-A0A7C5Q0K9-F1-model_v4 ATP-binding cassette domain-containing protein 0.9532 2 246 GO:0005524
GO:0016887
AF-A0A3C0PHH4-F1-model_v4 ABC transporter ATP-binding protein 0.9515 1 245 GO:0005524
GO:0016887

Map