F334763

General Info

Members Datasets Scaffolds Average Seq Length
222 164 203 314

Family's Representative Sequence

Representative Sequence 3300045836|Ga0466958_0019113|Ga0466958_0019113_2581_3687
Length 368
Sequence MWFHFETTWDGGNVDVASKRQGAGLPSCPVCSLKAALLVRGAMLICEGNMRRIGLVVVPQFQVVSLLVLSVFEFANLRAGRPLYEVNVISEDGEPVEASFGMRASTTPARALDFHTVFVGASLATPPLTERMRELLLHLAENSERMASICLGAFFLAEVGLLDGRRATTHWAFLERFRERYPDVSVVKDAIFVRDGTVWSSAGMTTAVDMALGMLEDDLGADVAVQVAKDLVMERWRRSGAQPQASVLIEHPARTNRIHDVITYIRMNLATDLTVEKLADVARMSNRQFTRRFKDETGLPPAKAVERMRLEAAKDLLTSSSWTIDTIARETGFADPERMRRSFIRAFGEPPQALRRQGKAQRAGASDE

Samples

Sample ID Description Type Environment
1 2509276021 Rhizobium leguminosarum bv. trifolii WSM597 Isolate Nodule
2 2511231028 Bradyrhizobium sp. YR681 Isolate Rhizosphere
3 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
4 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
5 2643221556 Massilia sp. Root1485 Isolate Unclassified
6 2643221684 Massilia sp. Root133 Isolate Unclassified
7 2718218233 Rhizobium phaseoli sv. phaseoli R744 Isolate Nodule
8 2738541296 Paraburkholderia sp. GV073 Isolate Unclassified
9 2738541298 Paraburkholderia sp. GV068 Isolate Unclassified
10 2738541306 Paraburkholderia sp. GV052 Isolate Unclassified
11 2738543002 Paraburkholderia sp. GV072 Isolate Unclassified
12 2738543008 Paraburkholderia sp. GV060 Isolate Unclassified
13 2842311132 Rhizobium phaseoli SEMIA 4002 Isolate Nodule
14 2874628541 Bradyrhizobium betae Opo-243 Isolate Unclassified
15 2945934425 Paraburkholderia graminis W1I13 Isolate Rhizosphere
16 2990703756 Paraburkholderia graminis SLBN-33 Isolate Rhizosphere
17 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
18 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
19 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
20 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
21 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
22 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
23 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
24 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
25 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
26 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
27 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
28 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
29 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
30 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
31 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
32 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
33 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
34 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
35 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
39 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
40 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
41 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
42 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
53 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
54 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
55 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
59 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
60 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
68 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
69 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
70 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
71 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
72 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
73 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
74 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
75 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
76 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
79 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
80 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
81 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
82 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
83 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
84 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
85 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
86 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
87 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
88 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
89 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
90 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
91 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
92 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
93 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
94 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
95 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
96 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
97 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
98 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
99 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
100 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
101 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
102 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
103 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
104 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
105 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
106 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
107 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
108 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
109 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
110 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
111 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
112 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
113 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
114 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
115 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
116 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
117 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
118 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
119 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
120 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
121 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
122 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
123 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
124 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
125 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
126 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
127 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
128 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
129 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
130 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
131 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
132 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
133 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
134 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
135 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
136 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
137 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
138 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
139 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
140 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
141 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
142 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
143 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
144 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
145 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
146 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
147 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
148 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
149 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
150 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
151 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
152 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
153 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
154 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
155 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
156 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
157 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
158 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
159 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
160 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
161 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
162 641736151 Paraburkholderia graminis C4D1M Isolate Rhizoplane
163 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
164 8047673197 Telluria mixta LMG 11547 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.44
Metatranscriptomes 0
Isolates 8.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.91
Nodule 1.35
Rhizoplane 8.56
Rhizosphere 66.22
Stem 0
Stem Tuber 0
Unclassified 13.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000277 3300001979 Bacteria 21763
2 JGI24737J22298_10022796 3300001990 Bacteria 1989
3 JGI24735J21928_10000021 3300002067 Bacteria 99198
4 rootL2_10028855 3300003322 Bacteria 14866
5 rootH1_10149328 3300003323 Bacteria 4716
6 JGI25160J50197_1000774 3300003354 Bacteria 17157
7 Ga0055533_1000140 3300003756 Bacteria 76502
8 Ga0055541_1010653 3300003841 Bacteria 1374
9 Ga0065165_1002238 3300005262 Bacteria 17195
10 Ga0070658_10488807 3300005327 Bacteria 1062
11 Ga0070660_100054779 3300005339 Bacteria 3080
12 Ga0070659_100025900 3300005366 Bacteria 4511
13 Ga0070709_10070144 3300005434 Bacteria 2258
14 Ga0070714_100029506 3300005435 Bacteria 4560
15 Ga0070714_100030050 3300005435 Bacteria 4521
16 Ga0070714_100175758 3300005435 Bacteria 1946
17 Ga0070713_100009379 3300005436 Bacteria 7002
18 Ga0070710_10079577 3300005437 Bacteria 1910
19 Ga0070711_100049815 3300005439 Bacteria 2869
20 Ga0070663_100074811 3300005455 Bacteria 2474
21 Ga0081538_10036981 3300005981 Bacteria 3176
22 Ga0081539_10001398 3300005985 Bacteria 41551
23 Ga0070717_10338278 3300006028 Bacteria 1344
24 Ga0075365_10088938 3300006038 Bacteria 2102
25 Ga0075363_100050391 3300006048 Bacteria 2218
26 Ga0075364_10010361 3300006051 Bacteria 5629
27 Ga0070715_10000835 3300006163 Bacteria 8456
28 Ga0070716_100008802 3300006173 Bacteria 5014
29 Ga0070712_100087299 3300006175 Bacteria 2275
30 Ga0075362_10009464 3300006177 Bacteria 3769
31 Ga0075428_100015953 3300006844 Bacteria 8312
32 Ga0105240_10000240 3300009093 Bacteria 109195
33 Ga0105237_10075793 3300009545 Bacteria 3354
34 Ga0105237_10135511 3300009545 Bacteria 2457
35 Ga0105237_10214654 3300009545 Bacteria 1924
36 Ga0105238_10030794 3300009551 Bacteria 5461
37 Ga0105239_10062789 3300010375 Bacteria 4077
38 Ga0157369_10006744 3300013105 Bacteria 13250
39 Ga0157372_10297141 3300013307 Bacteria 1878
40 Ga0182008_10012833 3300014497 Bacteria 4416
41 Ga0182006_1006409 3300015261 Bacteria 5472
42 Ga0213875_10044639 3300021388 Bacteria 2081
43 Ga0209674_100025 3300025226 Bacteria 515942
44 Ga0209563_100206 3300025230 Bacteria 31352
45 Ga0209564_1004287 3300025295 Bacteria 8841
46 Ga0209256_1001622 3300025299 Bacteria 21931
47 Ga0207426_1000103 3300025302 Bacteria 250320
48 Ga0207647_10021529 3300025904 Bacteria 4303
49 Ga0207699_10104824 3300025906 Bacteria 1801
50 Ga0207693_10019088 3300025915 Bacteria 5457
51 Ga0207693_10030390 3300025915 Bacteria 4266
52 Ga0207657_10000784 3300025919 Bacteria 33773
53 Ga0207664_10052674 3300025929 Bacteria 3219
54 Ga0207664_10207667 3300025929 Bacteria 1693
55 Ga0207690_10166574 3300025932 Bacteria 1647
56 Ga0207665_10007502 3300025939 Bacteria 7208
57 Ga0307515_10133020 3300028794 Bacteria 2724
58 Ga0307511_10082716 3300030521 Bacteria 2242
59 Ga0307513_10001175 3300031456 Bacteria 37977
60 Ga0265314_10017792 3300031711 Bacteria 5569
61 Ga0265342_10017706 3300031712 Bacteria 4628
62 Ga0307516_10014661 3300031730 Bacteria 8281
63 Ga0307516_10059597 3300031730 Bacteria 3712
64 Ga0307516_10289129 3300031730 Bacteria 1318
65 Ga0307412_10000021 3300031911 Bacteria 250629
66 Ga0373936_0019427 3300035113 Bacteria 2633
67 Ga0373936_0045751 3300035113 Bacteria 1763
68 Ga0373946_0158795 3300035171 Bacteria 1060
69 Ga0373927_0200613 3300035695 Bacteria 1310
70 Ga0373937_0729825 3300036401 Bacteria 938
71 Ga0373925_0195190 3300037068 Bacteria 1608
72 Ga0395900_0034239 3300037418 Bacteria 5230
73 Ga0395905_0000009 3300037471 Bacteria 488729
74 Ga0436364_0644477 3300037853 Bacteria 2235
75 Ga0436364_0793835 3300037853 Bacteria 20178
76 Ga0466965_0074147 3300044683 Bacteria 1714
77 Ga0466966_0050214 3300044684 Bacteria 2654
78 Ga0466959_0133961 3300045049 Bacteria 1755
79 Ga0466958_0019113 3300045836 Bacteria 3986
80 Ga0495627_001222 3300046453 Bacteria 16022
81 Ga0495592_0008506 3300046454 Bacteria 7703
82 Ga0495629_0034053 3300046459 Bacteria 3601
83 Ga0495638_0001024 3300046460 Bacteria 27760
84 Ga0495638_0002437 3300046460 Bacteria 15194
85 Ga0495638_0003978 3300046460 Bacteria 11372
86 Ga0495653_0043722 3300046463 Bacteria 3481
87 Ga0495650_0000024 3300046471 Bacteria 496674
88 Ga0495650_0047045 3300046471 Bacteria 1807
89 Ga0495580_0138262 3300046472 Bacteria 1689
90 Ga0495582_0071919 3300046473 Bacteria 1913
91 Ga0495605_0000104 3300046474 Bacteria 105745
92 Ga0495605_0001502 3300046474 Bacteria 15196
93 Ga0495664_0011943 3300046477 Bacteria 4906
94 Ga0495584_0001415 3300046491 Bacteria 14450
95 Ga0495584_0078304 3300046491 Bacteria 1663
96 Ga0495607_0000602 3300046501 Bacteria 35012
97 Ga0495607_0002278 3300046501 Bacteria 15806
98 Ga0495606_0001490 3300046507 Bacteria 31125
99 Ga0495606_0030136 3300046507 Bacteria 3795
100 Ga0495610_0000078 3300046512 Bacteria 116266
101 Ga0495610_0001663 3300046512 Bacteria 19543
102 Ga0495610_0007040 3300046512 Bacteria 7597
103 Ga0495618_0068504 3300046514 Bacteria 2256
104 Ga0495628_0067111 3300046516 Bacteria 2802
105 Ga0495628_0133305 3300046516 Bacteria 1899
106 Ga0495630_0000301 3300046517 Bacteria 39539
107 Ga0495632_0000063 3300046519 Bacteria 117984
108 Ga0495632_0009205 3300046519 Bacteria 5969
109 Ga0495643_0001506 3300046522 Bacteria 21094
110 Ga0495643_0004085 3300046522 Bacteria 10396
111 Ga0495643_0011679 3300046522 Bacteria 5334
112 Ga0495643_0125762 3300046522 Bacteria 1291
113 Ga0495643_0162494 3300046522 Bacteria 1098
114 Ga0495648_0003837 3300046524 Bacteria 13041
115 Ga0495666_0002908 3300046526 Bacteria 8581
116 Ga0495666_0007793 3300046526 Bacteria 5362
117 Ga0495642_0008028 3300046528 Bacteria 4038
118 Ga0495642_0022407 3300046528 Bacteria 2489
119 Ga0495652_0155143 3300046529 Bacteria 1784
120 Ga0495654_0000026 3300046530 Bacteria 234940
121 Ga0495665_0012789 3300046531 Bacteria 4540
122 Ga0495645_0294059 3300046543 Bacteria 1063
123 Ga0495656_0014864 3300046615 Bacteria 2927
124 Ga0495634_0015824 3300046642 Bacteria 5406
125 Ga0495625_0000683 3300046660 Bacteria 48312
126 Ga0495625_0006262 3300046660 Bacteria 10645
127 Ga0495625_0018515 3300046660 Bacteria 5434
128 Ga0495635_0008292 3300046663 Bacteria 7250
129 Ga0495661_0000623 3300046665 Bacteria 36079
130 Ga0495661_0002829 3300046665 Bacteria 13143
131 Ga0495661_0003554 3300046665 Bacteria 11482
132 Ga0495588_0168972 3300046674 Bacteria 1156
133 Ga0495646_0050848 3300046680 Bacteria 2509
134 Ga0495589_0000082 3300046794 Bacteria 87068
135 Ga0495600_0007339 3300046809 Bacteria 6736
136 Ga0495600_0079165 3300046809 Bacteria 2146
137 Ga0495660_0000297 3300046810 Bacteria 45575
138 Ga0495660_0001804 3300046810 Bacteria 14101
139 Ga0495660_0035888 3300046810 Bacteria 2767
140 Ga0495581_0015911 3300047315 Bacteria 4370
141 Ga0495604_0106993 3300047317 Bacteria 2045
142 Ga0495674_0016448 3300047319 Bacteria 6900
143 Ga0495674_0180977 3300047319 Bacteria 1755
144 Ga0495672_0001047 3300047320 Bacteria 28265
145 Ga0495672_0001365 3300047320 Bacteria 24188
146 Ga0495672_0023676 3300047320 Bacteria 3970
147 Ga0495672_0027012 3300047320 Bacteria 3654
148 Ga0495676_0153856 3300047321 Bacteria 1633
149 Ga0495676_0200634 3300047321 Bacteria 1386
150 Ga0495683_0005256 3300047323 Bacteria 7194
151 Ga0495687_000016 3300047443 Bacteria 359237
152 Ga0495687_000661 3300047443 Bacteria 39602
153 Ga0495687_011616 3300047443 Bacteria 4719
154 Ga0495687_026105 3300047443 Bacteria 2754
155 Ga0495687_058575 3300047443 Bacteria 1597
156 Ga0495675_0089970 3300047444 Bacteria 1926
157 Ga0495677_0008319 3300047445 Bacteria 3856
158 Ga0495679_002659 3300047446 Bacteria 8952
159 Ga0495673_0000346 3300047469 Bacteria 58325
160 Ga0495673_0082967 3300047469 Bacteria 1324
161 Ga0495686_0135840 3300047472 Bacteria 1454
162 Ga0495626_0000081 3300048091 Bacteria 128894
163 Ga0495626_0047808 3300048091 Bacteria 1988
164 Ga0496102_0148380 3300048905 Bacteria 2202
165 Ga0496102_0178721 3300048905 Bacteria 1999
166 Ga0496104_0000849 3300048907 Bacteria 26421
167 Ga0496104_0005155 3300048907 Bacteria 11414
168 Ga0496104_0050121 3300048907 Bacteria 3939
169 Ga0496105_0000497 3300048908 Bacteria 25939
170 Ga0496105_0001293 3300048908 Bacteria 17511
171 Ga0496105_0037121 3300048908 Bacteria 4013
172 Ga0496105_0078573 3300048908 Bacteria 2724
173 Ga0496105_0095051 3300048908 Bacteria 2461
174 Ga0496105_0095704 3300048908 Bacteria 2452
175 Ga0496110_0084733 3300048913 Bacteria 2829
176 Ga0496111_0376911 3300048914 Bacteria 1049
177 Ga0496112_0020030 3300048915 Bacteria 6333
178 Ga0496113_0308099 3300048916 Bacteria 1268
179 Ga0496115_0019299 3300048918 Bacteria 5247
180 Ga0496117_0009529 3300048920 Bacteria 9017
181 Ga0496118_0028330 3300048921 Bacteria 4719
182 Ga0496118_0086543 3300048921 Unclassified 2177
183 Ga0496121_0005065 3300048924 Bacteria 17200
184 Ga0496121_0005505 3300048924 Bacteria 16188
185 Ga0496121_0262386 3300048924 Bacteria 1192
186 Ga0496122_0001305 3300048925 Bacteria 41082
187 Ga0496122_0017655 3300048925 Bacteria 6654
188 Ga0496123_0007776 3300048926 Bacteria 9989
189 Ga0496124_0067233 3300048927 Plasmid 2983
190 Ga0496126_0015984 3300048929 Bacteria 7526
191 Ga0496126_0021491 3300048929 Bacteria 6302
192 Ga0495682_0006692 3300049460 Bacteria 4654
193 nmdc:mga03683_2975_c1 3300050489 Bacteria 5362
194 nmdc:mga00v17_7804_c1 3300050491 Bacteria 5736
195 nmdc:mga0yw44_70337_c1 3300050492 Bacteria 2170
196 nmdc:mga05p37_211498_c1 3300050507 Bacteria 2344
197 nmdc:mga06r32_338655_c1 3300050510 Bacteria 1489
198 nmdc:mga0sz30_58620_c1 3300050516 Bacteria 1642
199 Ga0500566_0000373 3300053094 Bacteria 24600
200 Ga0500554_000604 3300053102 Bacteria 7312
201 Ga0500618_000058 3300053125 Bacteria 97628
202 Ga0500559_0012553 3300053136 Bacteria 3597
203 Ga0500627_0016185 3300053158 Bacteria 2903

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300028794 Ga0307515_10133020 Ga0307515_101330202 262
2 3300046660 Ga0495625_0000683 Ga0495625_0000683_17693_18652 262
3 3300053102 Ga0500554_000604 Ga0500554_000604_1393_2334 262
4 3300046810 Ga0495660_0001804 Ga0495660_0001804_4919_5884 267
5 3300046543 Ga0495645_0294059 Ga0495645_0294059_235_1041 268
6 3300047319 Ga0495674_0180977 Ga0495674_0180977_905_1711 268
7 3300025299 Ga0209256_1001622 Ga0209256_100162211 276
8 3300047321 Ga0495676_0200634 Ga0495676_0200634_508_1362 281
9 3300046471 Ga0495650_0000024 Ga0495650_0000024_332643_333620 283
10 3300046530 Ga0495654_0000026 Ga0495654_0000026_47082_48059 283
11 3300053158 Ga0500627_0016185 Ga0500627_0016185_128_1105 283
12 3300047472 Ga0495686_0135840 Ga0495686_0135840_266_1207 286
13 3300048091 Ga0495626_0047808 Ga0495626_0047808_14_877 287
14 3300046460 Ga0495638_0001024 Ga0495638_0001024_10270_11235 293
15 3300046460 Ga0495638_0003978 Ga0495638_0003978_2660_3634 293
16 3300047446 Ga0495679_002659 Ga0495679_002659_5955_6920 293
17 3300053125 Ga0500618_000058 Ga0500618_000058_65846_66811 293
18 3300053136 Ga0500559_0012553 Ga0500559_0012553_969_1928 293
19 3300031730 Ga0307516_10059597 Ga0307516_100595973 294
20 iso_pu_bacteria 2511231028 2511401395 294
21 3300046660 Ga0495625_0006262 Ga0495625_0006262_4114_5091 295
22 3300047320 Ga0495672_0001047 Ga0495672_0001047_7674_8651 295
23 3300046460 Ga0495638_0002437 Ga0495638_0002437_3393_4370 296
24 3300046512 Ga0495610_0000078 Ga0495610_0000078_86404_87381 296
25 3300046660 Ga0495625_0018515 Ga0495625_0018515_292_1269 296
26 3300035695 Ga0373927_0200613 Ga0373927_0200613_37_975 297
27 3300036401 Ga0373937_0729825 Ga0373937_0729825_16_918 299
28 iso_pu_bacteria 2842311132 2842316488 299
29 3300046453 Ga0495627_001222 Ga0495627_001222_69_1040 300
30 3300047469 Ga0495673_0000346 Ga0495673_0000346_51004_51948 300
31 3300048907 Ga0496104_0050121 Ga0496104_0050121_1412_2368 301
32 3300048908 Ga0496105_0001293 Ga0496105_0001293_2794_3750 301
33 3300048908 Ga0496105_0037121 Ga0496105_0037121_1412_2368 301
34 3300048908 Ga0496105_0095051 Ga0496105_0095051_1398_2354 301
35 3300048916 Ga0496113_0308099 Ga0496113_0308099_106_1062 301
36 3300048918 Ga0496115_0019299 Ga0496115_0019299_3807_4763 301
37 3300005985 Ga0081539_10001398 Ga0081539_1000139841 302
38 3300009545 Ga0105237_10214654 Ga0105237_102146542 303
39 3300035113 Ga0373936_0045751 Ga0373936_0045751_710_1624 303
40 3300048914 Ga0496111_0376911 Ga0496111_0376911_118_1035 303
41 3300048908 Ga0496105_0078573 Ga0496105_0078573_83_1039 305
42 3300005437 Ga0070710_10079577 Ga0070710_100795772 306
43 3300021388 Ga0213875_10044639 Ga0213875_100446392 306
44 3300025906 Ga0207699_10104824 Ga0207699_101048242 306
45 3300035171 Ga0373946_0158795 Ga0373946_0158795_76_1011 307
46 3300046512 Ga0495610_0007040 Ga0495610_0007040_3396_4340 307
47 iso_pu_bacteria 2643221556 2643800766 307
48 iso_pu_bacteria 2643221684 2644470996 307
49 iso_pu_bacteria 2874628541 2874636513 307
50 iso_pu_bacteria 8047673197 8047677353 307
51 3300037853 Ga0436364_0644477 Ga0436364_0644477_823_1764 308
52 3300031456 Ga0307513_10001175 Ga0307513_1000117527 309
53 3300046522 Ga0495643_0162494 Ga0495643_0162494_39_986 309
54 3300003322 rootL2_10028855 rootL2_1002885514 310
55 3300005981 Ga0081538_10036981 Ga0081538_100369812 310
56 3300006051 Ga0075364_10010361 Ga0075364_100103612 310
57 3300006177 Ga0075362_10009464 Ga0075362_100094645 310
58 3300013307 Ga0157372_10297141 Ga0157372_102971412 310
59 3300037418 Ga0395900_0034239 Ga0395900_0034239_3528_4466 310
60 3300044683 Ga0466965_0074147 Ga0466965_0074147_473_1435 310
61 3300044684 Ga0466966_0050214 Ga0466966_0050214_120_1127 310
62 3300045049 Ga0466959_0133961 Ga0466959_0133961_781_1743 310
63 3300046474 Ga0495605_0000104 Ga0495605_0000104_38750_39688 310
64 3300046491 Ga0495584_0001415 Ga0495584_0001415_5365_6303 310
65 3300046501 Ga0495607_0000602 Ga0495607_0000602_6727_7665 310
66 3300046501 Ga0495607_0002278 Ga0495607_0002278_6486_7424 310
67 3300046507 Ga0495606_0001490 Ga0495606_0001490_29715_30653 310
68 3300046522 Ga0495643_0001506 Ga0495643_0001506_13671_14609 310
69 3300046522 Ga0495643_0011679 Ga0495643_0011679_2292_3230 310
70 3300046522 Ga0495643_0125762 Ga0495643_0125762_133_1071 310
71 3300046524 Ga0495648_0003837 Ga0495648_0003837_10898_11836 310
72 3300046615 Ga0495656_0014864 Ga0495656_0014864_1190_2128 310
73 3300046665 Ga0495661_0000623 Ga0495661_0000623_6710_7648 310
74 3300046665 Ga0495661_0002829 Ga0495661_0002829_11497_12435 310
75 3300046665 Ga0495661_0003554 Ga0495661_0003554_1161_2099 310
76 3300046674 Ga0495588_0168972 Ga0495588_0168972_56_1129 310
77 3300046794 Ga0495589_0000082 Ga0495589_0000082_47679_48617 310
78 3300046810 Ga0495660_0000297 Ga0495660_0000297_6186_7124 310
79 3300046810 Ga0495660_0035888 Ga0495660_0035888_1357_2295 310
80 3300047320 Ga0495672_0023676 Ga0495672_0023676_2573_3511 310
81 3300047443 Ga0495687_000016 Ga0495687_000016_55560_56498 310
82 3300047443 Ga0495687_000661 Ga0495687_000661_2478_3416 310
83 3300047443 Ga0495687_026105 Ga0495687_026105_1203_2141 310
84 3300048091 Ga0495626_0000081 Ga0495626_0000081_32159_33097 310
85 3300048905 Ga0496102_0178721 Ga0496102_0178721_796_1734 310
86 3300048924 Ga0496121_0262386 Ga0496121_0262386_50_988 310
87 3300048925 Ga0496122_0001305 Ga0496122_0001305_14471_15562 310
88 3300048926 Ga0496123_0007776 Ga0496123_0007776_424_1515 310
89 3300050489 nmdc:mga03683_2975_c1 nmdc:mga03683_2975_c1_2967_3902 310
90 3300050491 nmdc:mga00v17_7804_c1 nmdc:mga00v17_7804_c1_4282_5217 310
91 iso_pu_bacteria 2599185292 2599907406 310
92 3300005327 Ga0070658_10488807 Ga0070658_104888071 311
93 3300005339 Ga0070660_100054779 Ga0070660_1000547792 311
94 3300005366 Ga0070659_100025900 Ga0070659_1000259002 311
95 3300006038 Ga0075365_10088938 Ga0075365_100889382 311
96 3300006048 Ga0075363_100050391 Ga0075363_1000503913 311
97 3300006844 Ga0075428_100015953 Ga0075428_1000159534 311
98 3300025919 Ga0207657_10000784 Ga0207657_100007846 311
99 3300025932 Ga0207690_10166574 Ga0207690_101665742 311
100 3300046809 Ga0495600_0079165 Ga0495600_0079165_921_1859 311
101 3300048921 Ga0496118_0028330 Ga0496118_0028330_2822_3760 311
102 3300053094 Ga0500566_0000373 Ga0500566_0000373_18941_19879 311
103 3300046519 Ga0495632_0000063 Ga0495632_0000063_110172_111116 312
104 3300047320 Ga0495672_0001365 Ga0495672_0001365_22950_23906 312
105 3300048929 Ga0496126_0015984 Ga0496126_0015984_3550_4503 312
106 3300050492 nmdc:mga0yw44_70337_c1 nmdc:mga0yw44_70337_c1_580_1521 312
107 3300050507 nmdc:mga05p37_211498_c1 nmdc:mga05p37_211498_c1_765_1706 312
108 3300050516 nmdc:mga0sz30_58620_c1 nmdc:mga0sz30_58620_c1_243_1184 312
109 3300005435 Ga0070714_100030050 Ga0070714_1000300505 313
110 3300009545 Ga0105237_10135511 Ga0105237_101355113 313
111 3300025929 Ga0207664_10052674 Ga0207664_100526744 313
112 3300031711 Ga0265314_10017792 Ga0265314_100177922 313
113 3300031712 Ga0265342_10017706 Ga0265342_100177062 313
114 3300035113 Ga0373936_0019427 Ga0373936_0019427_433_1389 313
115 3300037853 Ga0436364_0793835 Ga0436364_0793835_10390_11337 313
116 3300048915 Ga0496112_0020030 Ga0496112_0020030_2313_3257 313
117 3300048929 Ga0496126_0021491 Ga0496126_0021491_1839_2786 313
118 3300005434 Ga0070709_10070144 Ga0070709_100701441 314
119 3300005435 Ga0070714_100175758 Ga0070714_1001757582 314
120 3300006028 Ga0070717_10338278 Ga0070717_103382781 314
121 3300006175 Ga0070712_100087299 Ga0070712_1000872992 314
122 3300025915 Ga0207693_10030390 Ga0207693_100303903 314
123 3300046491 Ga0495584_0078304 Ga0495584_0078304_29_988 314
124 3300046507 Ga0495606_0030136 Ga0495606_0030136_1803_2762 314
125 3300046519 Ga0495632_0009205 Ga0495632_0009205_4706_5668 314
126 3300046522 Ga0495643_0004085 Ga0495643_0004085_1035_1994 314
127 3300046528 Ga0495642_0022407 Ga0495642_0022407_768_1727 314
128 3300047445 Ga0495677_0008319 Ga0495677_0008319_685_1644 314
129 3300050510 nmdc:mga06r32_338655_c1 nmdc:mga06r32_338655_c1_82_1053 314
130 iso_pu_bacteria 2599185236 2599723411 314
131 3300015261 Ga0182006_1006409 Ga0182006_10064094 315
132 3300037068 Ga0373925_0195190 Ga0373925_0195190_443_1483 315
133 3300048924 Ga0496121_0005065 Ga0496121_0005065_1740_2690 315
134 3300048925 Ga0496122_0017655 Ga0496122_0017655_3906_4856 315
135 3300048927 Ga0496124_0067233 Ga0496124_0067233_409_1359 315
136 iso_pu_bacteria 2509276021 2509391406 315
137 iso_pu_bacteria 2718218233 2720617944 315
138 iso_pu_bacteria 8005645114 8005651174 315
139 3300003756 Ga0055533_1000140 Ga0055533_100014050 317
140 3300005435 Ga0070714_100029506 Ga0070714_1000295062 317
141 3300005436 Ga0070713_100009379 Ga0070713_1000093793 317
142 3300005439 Ga0070711_100049815 Ga0070711_1000498152 317
143 3300006163 Ga0070715_10000835 Ga0070715_100008354 317
144 3300006173 Ga0070716_100008802 Ga0070716_1000088023 317
145 3300025226 Ga0209674_100025 Ga0209674_100025281 317
146 3300025230 Ga0209563_100206 Ga0209563_1002069 317
147 3300025915 Ga0207693_10019088 Ga0207693_100190883 317
148 3300025929 Ga0207664_10207667 Ga0207664_102076672 317
149 3300025939 Ga0207665_10007502 Ga0207665_100075026 317
150 3300045836 Ga0466958_0019113 Ga0466958_0019113_2581_3687 317
151 3300046516 Ga0495628_0133305 Ga0495628_0133305_473_1426 317
152 3300047317 Ga0495604_0106993 Ga0495604_0106993_1031_1984 317
153 3300047443 Ga0495687_058575 Ga0495687_058575_16_969 317
154 3300048907 Ga0496104_0000849 Ga0496104_0000849_21189_22148 318
155 3300048907 Ga0496104_0005155 Ga0496104_0005155_6787_7746 318
156 3300048908 Ga0496105_0000497 Ga0496105_0000497_3792_4751 318
157 3300048908 Ga0496105_0095704 Ga0496105_0095704_59_1018 318
158 3300009093 Ga0105240_10000240 Ga0105240_100002409 319
159 3300009545 Ga0105237_10075793 Ga0105237_100757934 319
160 3300010375 Ga0105239_10062789 Ga0105239_100627894 319
161 3300030521 Ga0307511_10082716 Ga0307511_100827162 319
162 3300031730 Ga0307516_10014661 Ga0307516_100146617 319
163 3300031730 Ga0307516_10289129 Ga0307516_102891292 319
164 iso_pu_bacteria 2738541296 2738818519 319
165 iso_pu_bacteria 2738541298 2738831324 319
166 iso_pu_bacteria 2738541306 2738872852 319
167 iso_pu_bacteria 2738543002 2739184482 319
168 iso_pu_bacteria 2738543008 2739219451 319
169 iso_pu_bacteria 2945934425 2945937234 319
170 iso_pu_bacteria 2990703756 2990706031 319
171 iso_pu_bacteria 641736151 642425767 319
172 3300048913 Ga0496110_0084733 Ga0496110_0084733_417_1415 320
173 3300001979 JGI24740J21852_10000277 JGI24740J21852_100002778 323
174 3300001990 JGI24737J22298_10022796 JGI24737J22298_100227961 323
175 3300002067 JGI24735J21928_10000021 JGI24735J21928_1000002171 323
176 3300003323 rootH1_10149328 rootH1_101493281 323
177 3300003354 JGI25160J50197_1000774 JGI25160J50197_100077410 323
178 3300003841 Ga0055541_1010653 Ga0055541_10106531 323
179 3300005262 Ga0065165_1002238 Ga0065165_100223810 323
180 3300005455 Ga0070663_100074811 Ga0070663_1000748112 323
181 3300009551 Ga0105238_10030794 Ga0105238_100307943 323
182 3300013105 Ga0157369_10006744 Ga0157369_1000674410 323
183 3300014497 Ga0182008_10012833 Ga0182008_100128331 323
184 3300025295 Ga0209564_1004287 Ga0209564_10042877 323
185 3300025302 Ga0207426_1000103 Ga0207426_1000103156 323
186 3300025904 Ga0207647_10021529 Ga0207647_100215292 323
187 3300031911 Ga0307412_10000021 Ga0307412_1000002175 323
188 3300037471 Ga0395905_0000009 Ga0395905_0000009_428271_429242 323
189 3300046454 Ga0495592_0008506 Ga0495592_0008506_6495_7466 323
190 3300046459 Ga0495629_0034053 Ga0495629_0034053_541_1512 323
191 3300046463 Ga0495653_0043722 Ga0495653_0043722_1917_2888 323
192 3300046471 Ga0495650_0047045 Ga0495650_0047045_650_1621 323
193 3300046472 Ga0495580_0138262 Ga0495580_0138262_575_1546 323
194 3300046473 Ga0495582_0071919 Ga0495582_0071919_548_1519 323
195 3300046474 Ga0495605_0001502 Ga0495605_0001502_2750_3721 323
196 3300046477 Ga0495664_0011943 Ga0495664_0011943_662_1633 323
197 3300046512 Ga0495610_0001663 Ga0495610_0001663_6281_7252 323
198 3300046514 Ga0495618_0068504 Ga0495618_0068504_193_1164 323
199 3300046516 Ga0495628_0067111 Ga0495628_0067111_157_1128 323
200 3300046517 Ga0495630_0000301 Ga0495630_0000301_11047_12018 323
201 3300046526 Ga0495666_0002908 Ga0495666_0002908_3359_4330 323
202 3300046526 Ga0495666_0007793 Ga0495666_0007793_3920_4891 323
203 3300046528 Ga0495642_0008028 Ga0495642_0008028_258_1229 323
204 3300046529 Ga0495652_0155143 Ga0495652_0155143_625_1596 323
205 3300046531 Ga0495665_0012789 Ga0495665_0012789_1723_2694 323
206 3300046642 Ga0495634_0015824 Ga0495634_0015824_241_1212 323
207 3300046663 Ga0495635_0008292 Ga0495635_0008292_3966_4937 323
208 3300046680 Ga0495646_0050848 Ga0495646_0050848_535_1506 323
209 3300046809 Ga0495600_0007339 Ga0495600_0007339_3925_4896 323
210 3300047315 Ga0495581_0015911 Ga0495581_0015911_141_1112 323
211 3300047319 Ga0495674_0016448 Ga0495674_0016448_5678_6658 323
212 3300047320 Ga0495672_0027012 Ga0495672_0027012_682_1653 323
213 3300047321 Ga0495676_0153856 Ga0495676_0153856_549_1520 323
214 3300047323 Ga0495683_0005256 Ga0495683_0005256_4338_5309 323
215 3300047443 Ga0495687_011616 Ga0495687_011616_2994_3965 323
216 3300047444 Ga0495675_0089970 Ga0495675_0089970_421_1392 323
217 3300047469 Ga0495673_0082967 Ga0495673_0082967_261_1232 323
218 3300048905 Ga0496102_0148380 Ga0496102_0148380_695_1666 323
219 3300048920 Ga0496117_0009529 Ga0496117_0009529_2138_3109 323
220 3300048921 Ga0496118_0086543 Ga0496118_0086543_259_1230 323
221 3300048924 Ga0496121_0005505 Ga0496121_0005505_9086_10057 323
222 3300049460 Ga0495682_0006692 Ga0495682_0006692_3448_4419 323

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12833

HTH_18

Helix-turn-helix domain

278

357

0.98

PF01965

DJ-1_PfpI

DJ-1/PfpI family

55

217

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3oio-assembly1.cif.gz_A crystal structure of transcriptional regulator (arac-type dna-binding domain-containing proteins) from chromobacterium violaceum 0.9331 210 308
3mgk-assembly1.cif.gz_A crystal structure of probable protease/amidase from clostridium acetobutylicum atcc 824 0.8934 1 193
3er6-assembly3.cif.gz_E crystal structure of a putative transcriptional regulator protein from vibrio parahaemolyticus 0.8838 2 185
3w6v-assembly1.cif.gz_A crystal structure of the dna-binding domain of adpa, the global transcriptional factor, in complex with a target dna 0.8814 208 310
3gra-assembly1.cif.gz_A crystal structure of arac family transcriptional regulator from pseudomonas putida 0.8794 1 185
ID Description Score Start End Superfamily
af_P0A9E0_176_235_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9539 208 261 1.10.10.60
af_P77379_178_282_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9432 211 310 1.10.10.60
3oioA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9231 210 308 1.10.10.60
af_P96245_143_250_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9071 205 304 1.10.10.60
af_P05052_134_237_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.902 210 307 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A537CBF0-F1-model_v4 DJ-1/PfpI family protein 0.9821 83 189 GO:0006355
AF-A0A6I1W257-F1-model_v4 AraC family transcriptional regulator 0.9706 79 166 GO:0006355
AF-A0A3M5WS52-F1-model_v4 ThiJ/PfpI protein 0.9686 101 193 GO:0006355
AF-A0A8B3W900-F1-model_v4 deleted 0.9616 83 189
AF-A0A5F0VUP4-F1-model_v4 deleted 0.9607 1 311

Feature Viewer

pLDDT pTM Quality
90.02 0.77 High
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Predicted Structure (AlphaFold2)

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