F334344

General Info

Members Datasets Scaffolds Average Seq Length
222 174 444 564

Family's Representative Sequence

Representative Sequence 3300006871|Ga0075434_100059547|Ga0075434_1000595472
Length 615
Sequence MGAVYLGVGKWAGVRCGWYPGHGAGRCVGAPPSVDGSRRYPYGPMRLSHLFFTTLRDDPSDAEMPSHRLLLRAGYVRQLGSGIYSLLPLGKRVNDRVEQVIREEQDRIGAQEMEMPVVHPADIWKASGRYQAIGPELGRFKDRNGRDMVLAMTHEEVVGLLLADVVRSYRQLPMQVYHFQTKWRDEPRSRGGLIRVREFVMKDAYSCDRDEAGLDRSYWEQYGAYVRTFERLGLSTIAVSSDVGMMGGSQAHEFMVLNPAGEDVLVLCERCDYAANRQVAVIPKPDPVPEEALPLEEVATPGTTTIATLAAFLGVGPDRTAKAAFFVTGDGRLVTAIVRGDYEVNETKLVNAVGASGGIRPATVEEIKAAGMEPGYGSPIGAKGTTVVVDDLVARSRNLVAGANREGFHYRNVNVGRDYTADVVADITNAQEGDPCPKCGSPVILRNGIEVGNIFKLGTKYSDAFGATYLGEDGQQHPIVMGSYGIGVGRNVACVVEEHHDEKGIVWPAEVAPYAAHLVSIGGAKEPTVIEVAERLHALAAEAGDRHEILWDDRDESPGVKFTDAELIGMPWILTVSPRSLAAGGVEVTERATGERSTRPIEEVERLLVEGFGAA

Samples

Sample ID Description Type Environment
1 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
21 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
22 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
26 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
30 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
31 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
42 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
43 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
44 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
45 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
58 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
61 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
89 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
91 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
92 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
93 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
94 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
95 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
96 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
97 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
98 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
99 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
100 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
101 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
102 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
103 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
104 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
106 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
107 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
108 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
109 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
110 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
111 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
112 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
113 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
114 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
115 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
116 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
117 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
118 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
119 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
120 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
121 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
122 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
123 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
124 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
125 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
126 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
138 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
139 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
140 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
141 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
142 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
143 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
144 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
145 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
146 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
147 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
148 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
149 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
150 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
155 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
156 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
157 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
158 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
159 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
160 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
161 2554235283 Bacillus safensis VK Isolate Rhizosphere
162 2643221735 Bacillus sp. Root920 Isolate Unclassified
163 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
164 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
165 2811994870 Bacillus sp. JB4 Isolate Unclassified
166 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
167 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
168 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
169 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
170 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
171 2919726948 Bacillus pumilus 4489 Isolate Unclassified
172 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
173 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
174 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.24
Metatranscriptomes 0.45
Isolates 6.31

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.9
Nodule 0
Rhizoplane 4.5
Rhizosphere 85.14
Stem 0
Stem Tuber 0
Unclassified 0.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075434_100059547 3300006871 Bacteria 3797
2 JGI25151J46595_10000012 3300003187 Bacteria 254028
3 rootH2_10030236 3300003320 Bacteria 4764
4 Ga0006562J51391_1001108 3300003578 Bacteria 49460
5 Ga0070658_10007768 3300005327 Bacteria 8643
6 Ga0070683_100073544 3300005329 Bacteria 3191
7 Ga0070670_100097327 3300005331 Bacteria 2531
8 Ga0068869_100017703 3300005334 Bacteria 4837
9 Ga0070682_100022311 3300005337 Bacteria 3748
10 Ga0070682_100036471 3300005337 Bacteria 3006
11 Ga0068868_100009122 3300005338 Bacteria 7122
12 Ga0070660_100002662 3300005339 Bacteria 12268
13 Ga0070691_10008182 3300005341 Bacteria 4792
14 Ga0070661_100004700 3300005344 Bacteria 9401
15 Ga0070675_100041547 3300005354 Bacteria 3756
16 Ga0070674_100025759 3300005356 Bacteria 3832
17 Ga0070673_100018041 3300005364 Bacteria 5033
18 Ga0070659_100040013 3300005366 Bacteria 3662
19 Ga0070659_100072623 3300005366 Bacteria 2738
20 Ga0070709_10000166 3300005434 Bacteria 41674
21 Ga0070713_100000050 3300005436 Bacteria 73746
22 Ga0070710_10000177 3300005437 Bacteria 29266
23 Ga0070701_10016315 3300005438 Bacteria 3450
24 Ga0070711_100003077 3300005439 Bacteria 9646
25 Ga0070694_100014228 3300005444 Bacteria 4980
26 Ga0070708_100000185 3300005445 Bacteria 45167
27 Ga0070708_100002352 3300005445 Bacteria 14632
28 Ga0070708_100022413 3300005445 Bacteria 5358
29 Ga0070708_100088454 3300005445 Bacteria 2816
30 Ga0070663_100028920 3300005455 Bacteria 3780
31 Ga0070678_100078768 3300005456 Bacteria 2490
32 Ga0070681_10022097 3300005458 Bacteria 6385
33 Ga0070681_10116874 3300005458 Bacteria 2604
34 Ga0068867_100028630 3300005459 Bacteria 4012
35 Ga0070685_10049439 3300005466 Bacteria 2425
36 Ga0070706_100007653 3300005467 Bacteria 10107
37 Ga0070707_100004082 3300005468 Bacteria 13710
38 Ga0070707_100027106 3300005468 Bacteria 5448
39 Ga0070699_100031337 3300005518 Bacteria 4589
40 Ga0070699_100052528 3300005518 Bacteria 3526
41 Ga0070679_100030486 3300005530 Bacteria 5324
42 Ga0070693_100024450 3300005547 Bacteria 3240
43 Ga0070665_100086842 3300005548 Bacteria 3133
44 Ga0070704_100107100 3300005549 Bacteria 2119
45 Ga0068855_100088278 3300005563 Bacteria 3582
46 Ga0070664_100023185 3300005564 Bacteria 5126
47 Ga0068854_100002544 3300005578 Bacteria 11292
48 Ga0068856_100050553 3300005614 Bacteria 4098
49 Ga0070702_100034970 3300005615 Bacteria 2774
50 Ga0068852_100040122 3300005616 Bacteria 3947
51 Ga0068852_100192420 3300005616 Bacteria 1925
52 Ga0068866_10021103 3300005718 Bacteria 2995
53 Ga0068861_100021680 3300005719 Bacteria 4620
54 Ga0070717_10004190 3300006028 Bacteria 10395
55 Ga0070712_100001526 3300006175 Bacteria 14126
56 Ga0075428_100004261 3300006844 Bacteria 15740
57 Ga0068865_100005364 3300006881 Bacteria 7766
58 Ga0068865_100023531 3300006881 Bacteria 4034
59 Ga0075435_100043319 3300007076 Bacteria 3603
60 Ga0111539_10003971 3300009094 Bacteria 19436
61 Ga0105245_10023427 3300009098 Bacteria 5419
62 Ga0105242_10027364 3300009176 Bacteria 4527
63 Ga0105239_10056769 3300010375 Bacteria 4295
64 Ga0105239_10067529 3300010375 Bacteria 3928
65 Ga0157369_10052651 3300013105 Bacteria 4403
66 Ga0163162_10144208 3300013306 Bacteria 2496
67 Ga0157375_10035557 3300013308 Bacteria 4756
68 Ga0157380_10098874 3300014326 Bacteria 2425
69 Ga0157377_10023093 3300014745 Bacteria 3293
70 Ga0157379_10037119 3300014968 Bacteria 4344
71 Ga0209025_1000001 3300025294 Bacteria 1888151
72 Ga0207692_10002515 3300025898 Bacteria 7043
73 Ga0207688_10000576 3300025901 Bacteria 18035
74 Ga0207699_10000102 3300025906 Bacteria 61110
75 Ga0207645_10048599 3300025907 Bacteria 2709
76 Ga0207684_10055819 3300025910 Bacteria 3350
77 Ga0207684_10123889 3300025910 Bacteria 2217
78 Ga0207693_10005030 3300025915 Bacteria 11101
79 Ga0207663_10000170 3300025916 Bacteria 29272
80 Ga0207657_10035393 3300025919 Bacteria 4478
81 Ga0207646_10001400 3300025922 Bacteria 29935
82 Ga0207646_10012982 3300025922 Bacteria 7983
83 Ga0207646_10024275 3300025922 Bacteria 5556
84 Ga0207659_10003581 3300025926 Bacteria 9350
85 Ga0207687_10014378 3300025927 Bacteria 5178
86 Ga0207700_10000029 3300025928 Bacteria 132615
87 Ga0207664_10000168 3300025929 Bacteria 52834
88 Ga0207664_10161935 3300025929 Bacteria 1909
89 Ga0207706_10014884 3300025933 Bacteria 7045
90 Ga0207665_10000144 3300025939 Bacteria 48077
91 Ga0207691_10008282 3300025940 Bacteria 9982
92 Ga0207691_10022410 3300025940 Bacteria 5956
93 Ga0207689_10057055 3300025942 Bacteria 3213
94 Ga0207661_10035794 3300025944 Bacteria 3871
95 Ga0207651_10065185 3300025960 Bacteria 2553
96 Ga0207640_10005817 3300025981 Bacteria 6724
97 Ga0207678_10045872 3300026067 Bacteria 3779
98 Ga0207678_10053234 3300026067 Bacteria 3489
99 Ga0207708_10021891 3300026075 Bacteria 4824
100 Ga0207648_10005403 3300026089 Bacteria 12879
101 Ga0207674_10004130 3300026116 Bacteria 17558
102 Ga0207675_100030149 3300026118 Bacteria 5051
103 Ga0207675_100041133 3300026118 Bacteria 4316
104 Ga0207683_10101926 3300026121 Bacteria 2563
105 Ga0209998_10008498 3300027717 Bacteria 2129
106 Ga0207428_10060200 3300027907 Bacteria 3009
107 Ga0268265_10076525 3300028380 Bacteria 2625
108 Ga0265326_10007816 3300028558 Bacteria 3257
109 Ga0265329_10003461 3300031242 Bacteria 6867
110 Ga0265342_10011086 3300031712 Bacteria 6187
111 Ga0316576_10003327 3300031727 Bacteria 9396
112 Ga0316576_10065333 3300031727 Bacteria 2674
113 Ga0316578_10021152 3300031728 Bacteria 3608
114 Ga0316577_10000892 3300031733 Bacteria 13155
115 Ga0316577_10038061 3300031733 Unclassified 2689
116 Ga0307409_100040357 3300031995 Bacteria 3474
117 Ga0307416_100002511 3300032002 Bacteria 10549
118 Ga0373943_0004228 3300035170 Bacteria 6510
119 Ga0316574_0026399 3300035398 Bacteria 3492
120 Ga0373927_0008837 3300035695 Bacteria 6766
121 Ga0373947_0002470 3300035725 Bacteria 11123
122 Ga0316582_0010155 3300036647 Bacteria 5145
123 Ga0316582_0058186 3300036647 Unclassified 2471
124 Ga0316584_0001433 3300036712 Bacteria 14280
125 Ga0316584_0004175 3300036712 Bacteria 9540
126 Ga0373925_0031037 3300037068 Bacteria 3924
127 Ga0316581_0001356 3300037588 Bacteria 5448
128 Ga0400485_01983 3300038735 Bacteria 9312
129 Ga0400483_101579 3300039062 Bacteria 1827
130 Ga0400483_116826 3300039062 Bacteria 10338
131 Ga0400483_137592 3300039062 Bacteria 6375
132 Ga0400483_224702 3300039062 Bacteria 9474
133 Ga0400483_255075 3300039062 Bacteria 4702
134 Ga0400483_262613 3300039062 Bacteria 18108
135 Ga0400489_04481 3300039093 Bacteria 5835
136 Ga0400489_75307 3300039093 Bacteria 110104
137 Ga0451853_0629052 3300041512 Bacteria 2987
138 Ga0453684_0003601 3300044712 Bacteria 34563
139 Ga0453684_0017344 3300044712 Bacteria 11157
140 Ga0453684_0115229 3300044712 Bacteria 3256
141 Ga0453684_0133525 3300044712 Bacteria 2975
142 Ga0495641_0025882 3300046461 Bacteria 2873
143 Ga0495651_0027570 3300046462 Bacteria 4425
144 Ga0495665_0015503 3300046531 Bacteria 4104
145 Ga0495613_0097238 3300046689 Bacteria 2128
146 Ga0495624_0011694 3300046690 Bacteria 6028
147 Ga0495676_0004940 3300047321 Bacteria 12227
148 Ga0495602_0037675 3300048088 Bacteria 4483
149 Ga0496105_0031754 3300048908 Bacteria 4331
150 Ga0496105_0089002 3300048908 Bacteria 2550
151 Ga0496108_0034592 3300048911 Bacteria 4199
152 Ga0496109_0079711 3300048912 Bacteria 3017
153 Ga0496110_0059136 3300048913 Bacteria 3377
154 Ga0496111_0021568 3300048914 Bacteria 4501
155 Ga0496111_0107142 3300048914 Bacteria 2057
156 Ga0496112_0077316 3300048915 Bacteria 3291
157 Ga0496113_0035052 3300048916 Bacteria 3667
158 Ga0496114_0040766 3300048917 Bacteria 3845
159 Ga0501031_0074499 3300049568 Bacteria 2210
160 Ga0501032_0028254 3300049569 Bacteria 3854
161 Ga0501034_0194255 3300049571 Bacteria 1991
162 Ga0501036_0006638 3300049572 Bacteria 9403
163 Ga0501037_0156663 3300049573 Bacteria 1625
164 Ga0501038_0022165 3300049574 Bacteria 5692
165 Ga0501040_0017080 3300049576 Bacteria 4814
166 Ga0501040_0033214 3300049576 Bacteria 3494
167 Ga0501041_0026361 3300049577 Bacteria 3496
168 Ga0501042_0008403 3300049578 Bacteria 6811
169 Ga0501046_0023349 3300049580 Bacteria 5089
170 Ga0501046_0036561 3300049580 Bacteria 3951
171 Ga0501046_0040955 3300049580 Bacteria 3699
172 Ga0501048_0008719 3300049582 Bacteria 7645
173 Ga0501067_0014346 3300049583 Bacteria 4386
174 Ga0501068_0022659 3300049584 Bacteria 3674
175 Ga0501068_0026769 3300049584 Bacteria 3401
176 Ga0501070_0014203 3300049586 Bacteria 6700
177 Ga0501071_0012384 3300049587 Bacteria 5786
178 Ga0501071_0017654 3300049587 Bacteria 4925
179 Ga0501071_0051472 3300049587 Bacteria 2968
180 Ga0501072_0005951 3300049588 Bacteria 9293
181 Ga0501073_0021438 3300049589 Bacteria 4659
182 Ga0501075_0009067 3300049591 Bacteria 6947
183 Ga0501076_0027260 3300049592 Bacteria 4431
184 Ga0501076_0052929 3300049592 Bacteria 3216
185 Ga0501076_0148498 3300049592 Bacteria 1906
186 Ga0501077_0006692 3300049593 Bacteria 7085
187 Ga0501079_0013957 3300049741 Bacteria 6127
188 Ga0501079_0035966 3300049741 Bacteria 3813
189 Ga0501079_0057955 3300049741 Bacteria 2988
190 Ga0501080_0035385 3300049742 Bacteria 4661
191 Ga0501081_0011276 3300049743 Bacteria 5847
192 Ga0501081_0038639 3300049743 Bacteria 3262
193 Ga0501083_0002782 3300049744 Bacteria 12094
194 Ga0501035_0120225 3300049822 Bacteria 2297
195 Ga0501044_0137017 3300049823 Bacteria 2439
196 Ga0501045_0019991 3300049824 Bacteria 4780
197 Ga0501045_0054958 3300049824 Bacteria 2912
198 nmdc:mga05p37_107219_c1 3300050507 Bacteria 3437
199 nmdc:mga0n895_34066_c1 3300050512 Bacteria 4900
200 nmdc:mga0rr50_34899_c1 3300050513 Bacteria 3606
201 Ga0495612_0001095 3300053078 Bacteria 11097
202 Ga0495619_0028797 3300053085 Bacteria 3585
203 Ga0495619_0030251 3300053085 Bacteria 3504
204 Ga0501084_0087909 3300054114 Bacteria 2609
205 Ga0501082_0007727 3300060353 Bacteria 9283
206 Ga0501082_0046041 3300060353 Bacteria 3761
207 Ga0530510_0061549 3300061734 Bacteria 2717
208 Ga0530510_0095487 3300061734 Bacteria 2172
209 2555469076 2554235283 Bacteria 3683090
210 2644739941 2643221735 Bacteria 3676263
211 2686996834 2684623153 Bacteria 3878815
212 2687498137 2687453109 Bacteria 3860091
213 2812315975 2811994870 Bacteria 3776934
214 2819724734 2818991468 Bacteria 3723169
215 2823527974 2823526263 Bacteria 3765752
216 2857453866 2857453340 Bacteria 8090534
217 2908665749 2908665501 Bacteria 3678115
218 2919094052 2919093281 Bacteria 3660974
219 2919729041 2919726948 Bacteria 3696050
220 2954774526 2954773129 Bacteria 3741715
221 2971417028 2971410472 Bacteria 8311090
222 8056536559 8056533031 Bacteria 8964429
223 Ga0075434_100059547
224 JGI25151J46595_10000012
225 rootH2_10030236
226 Ga0006562J51391_1001108
227 Ga0070658_10007768
228 Ga0070683_100073544
229 Ga0070670_100097327
230 Ga0068869_100017703
231 Ga0070682_100022311
232 Ga0070682_100036471
233 Ga0068868_100009122
234 Ga0070660_100002662
235 Ga0070691_10008182
236 Ga0070661_100004700
237 Ga0070675_100041547
238 Ga0070674_100025759
239 Ga0070673_100018041
240 Ga0070659_100040013
241 Ga0070659_100072623
242 Ga0070709_10000166
243 Ga0070713_100000050
244 Ga0070710_10000177
245 Ga0070701_10016315
246 Ga0070711_100003077
247 Ga0070694_100014228
248 Ga0070708_100000185
249 Ga0070708_100002352
250 Ga0070708_100022413
251 Ga0070708_100088454
252 Ga0070663_100028920
253 Ga0070678_100078768
254 Ga0070681_10022097
255 Ga0070681_10116874
256 Ga0068867_100028630
257 Ga0070685_10049439
258 Ga0070706_100007653
259 Ga0070707_100004082
260 Ga0070707_100027106
261 Ga0070699_100031337
262 Ga0070699_100052528
263 Ga0070679_100030486
264 Ga0070693_100024450
265 Ga0070665_100086842
266 Ga0070704_100107100
267 Ga0068855_100088278
268 Ga0070664_100023185
269 Ga0068854_100002544
270 Ga0068856_100050553
271 Ga0070702_100034970
272 Ga0068852_100040122
273 Ga0068852_100192420
274 Ga0068866_10021103
275 Ga0068861_100021680
276 Ga0070717_10004190
277 Ga0070712_100001526
278 Ga0075428_100004261
279 Ga0068865_100005364
280 Ga0068865_100023531
281 Ga0075435_100043319
282 Ga0111539_10003971
283 Ga0105245_10023427
284 Ga0105242_10027364
285 Ga0105239_10056769
286 Ga0105239_10067529
287 Ga0157369_10052651
288 Ga0163162_10144208
289 Ga0157375_10035557
290 Ga0157380_10098874
291 Ga0157377_10023093
292 Ga0157379_10037119
293 Ga0209025_1000001
294 Ga0207692_10002515
295 Ga0207688_10000576
296 Ga0207699_10000102
297 Ga0207645_10048599
298 Ga0207684_10055819
299 Ga0207684_10123889
300 Ga0207693_10005030
301 Ga0207663_10000170
302 Ga0207657_10035393
303 Ga0207646_10001400
304 Ga0207646_10012982
305 Ga0207646_10024275
306 Ga0207659_10003581
307 Ga0207687_10014378
308 Ga0207700_10000029
309 Ga0207664_10000168
310 Ga0207664_10161935
311 Ga0207706_10014884
312 Ga0207665_10000144
313 Ga0207691_10008282
314 Ga0207691_10022410
315 Ga0207689_10057055
316 Ga0207661_10035794
317 Ga0207651_10065185
318 Ga0207640_10005817
319 Ga0207678_10045872
320 Ga0207678_10053234
321 Ga0207708_10021891
322 Ga0207648_10005403
323 Ga0207674_10004130
324 Ga0207675_100030149
325 Ga0207675_100041133
326 Ga0207683_10101926
327 Ga0209998_10008498
328 Ga0207428_10060200
329 Ga0268265_10076525
330 Ga0265326_10007816
331 Ga0265329_10003461
332 Ga0265342_10011086
333 Ga0316576_10003327
334 Ga0316576_10065333
335 Ga0316578_10021152
336 Ga0316577_10000892
337 Ga0316577_10038061
338 Ga0307409_100040357
339 Ga0307416_100002511
340 Ga0373943_0004228
341 Ga0316574_0026399
342 Ga0373927_0008837
343 Ga0373947_0002470
344 Ga0316582_0010155
345 Ga0316582_0058186
346 Ga0316584_0001433
347 Ga0316584_0004175
348 Ga0373925_0031037
349 Ga0316581_0001356
350 Ga0400485_01983
351 Ga0400483_101579
352 Ga0400483_116826
353 Ga0400483_137592
354 Ga0400483_224702
355 Ga0400483_255075
356 Ga0400483_262613
357 Ga0400489_04481
358 Ga0400489_75307
359 Ga0451853_0629052
360 Ga0453684_0003601
361 Ga0453684_0017344
362 Ga0453684_0115229
363 Ga0453684_0133525
364 Ga0495641_0025882
365 Ga0495651_0027570
366 Ga0495665_0015503
367 Ga0495613_0097238
368 Ga0495624_0011694
369 Ga0495676_0004940
370 Ga0495602_0037675
371 Ga0496105_0031754
372 Ga0496105_0089002
373 Ga0496108_0034592
374 Ga0496109_0079711
375 Ga0496110_0059136
376 Ga0496111_0021568
377 Ga0496111_0107142
378 Ga0496112_0077316
379 Ga0496113_0035052
380 Ga0496114_0040766
381 Ga0501031_0074499
382 Ga0501032_0028254
383 Ga0501034_0194255
384 Ga0501036_0006638
385 Ga0501037_0156663
386 Ga0501038_0022165
387 Ga0501040_0017080
388 Ga0501040_0033214
389 Ga0501041_0026361
390 Ga0501042_0008403
391 Ga0501046_0023349
392 Ga0501046_0036561
393 Ga0501046_0040955
394 Ga0501048_0008719
395 Ga0501067_0014346
396 Ga0501068_0022659
397 Ga0501068_0026769
398 Ga0501070_0014203
399 Ga0501071_0012384
400 Ga0501071_0017654
401 Ga0501071_0051472
402 Ga0501072_0005951
403 Ga0501073_0021438
404 Ga0501075_0009067
405 Ga0501076_0027260
406 Ga0501076_0052929
407 Ga0501076_0148498
408 Ga0501077_0006692
409 Ga0501079_0013957
410 Ga0501079_0035966
411 Ga0501079_0057955
412 Ga0501080_0035385
413 Ga0501081_0011276
414 Ga0501081_0038639
415 Ga0501083_0002782
416 Ga0501035_0120225
417 Ga0501044_0137017
418 Ga0501045_0019991
419 Ga0501045_0054958
420 nmdc:mga05p37_107219_c1
421 nmdc:mga0n895_34066_c1
422 nmdc:mga0rr50_34899_c1
423 Ga0495612_0001095
424 Ga0495619_0028797
425 Ga0495619_0030251
426 Ga0501084_0087909
427 Ga0501082_0007727
428 Ga0501082_0046041
429 Ga0530510_0061549
430 Ga0530510_0095487
431 2555469076
432 2644739941
433 2686996834
434 2687498137
435 2812315975
436 2819724734
437 2823527974
438 2857453866
439 2908665749
440 2919094052
441 2919729041
442 2954774526
443 2971417028
444 8056536559

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00587

tRNA-synt_2b

tRNA synthetase class II core domain (G, H, P, S and T)

139

499

0.97

PF04073

tRNA_edit

Aminoacyl-tRNA editing domain

300

419

0.96

PF03129

HGTP_anticodon

Anticodon binding domain

515

611

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
2j3m-assembly1.cif.gz_A prolyl-trna synthetase from enterococcus faecalis complexed with atp, manganese and prolinol 0.9371 1 564
2j3m-assembly1.cif.gz_A prolyl-trna synthetase from enterococcus faecalis complexed with atp, manganese and prolinol 0.9323 1 564
2j3l-assembly1.cif.gz_A prolyl-trna synthetase from enterococcus faecalis complexed with a prolyl-adenylate analogue ('5'-o-(n-(l-prolyl)-sulfamoyl)adenosine) 0.9207 1 564
5ucm-assembly1.cif.gz_B crystal structure of prolyl-trna synthetase from pseudomonas aeruginosa 0.918 1 564
1h4s-assembly1.cif.gz_B prolyl-trna synthetase from thermus thermophilus complexed with trnapro(cgg) and a prolyl-adenylate analogue 0.8813 22 564
ID Description Score Start End Superfamily
af_Q2G1Z4_2_243_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9858 3 243 3.30.930.10
5znkA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Anticodon-binding domain 0.9848 464 564 3.40.50.800
af_Q2G1Z4_464_559_3.40.50.800 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Anticodon-binding domain 0.9833 466 561 3.40.50.800
af_Q2G1Z4_2_243_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9777 3 243 3.30.930.10
2j3mA02 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.977 19 463 3.30.930.10
ID Description Score Start End GO Terms
AF-A0A354U3E9-F1-model_v4 deleted 0.9921 43 166
AF-X1CNL6-F1-model_v4 proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) 0.9918 80 229 GO:0004827
GO:0005524
GO:0005829
GO:0006433
AF-A0A7K0YA43-F1-model_v4 Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) 0.9874 1 206 GO:0004827
GO:0005524
GO:0005829
GO:0006433
AF-A0A5C9BIY0-F1-model_v4 Proline--tRNA ligase (EC 6.1.1.15) 0.987 1 205 GO:0004827
GO:0005524
GO:0005829
GO:0006433
AF-A0A7K0YI68-F1-model_v4 deleted 0.9863 1 219

Map