F334116

General Info

Members Datasets Scaffolds Average Seq Length
222 145 444 412

Family's Representative Sequence

Representative Sequence 3300005331|Ga0070670_100127054|Ga0070670_1001270542
Length 447
Sequence MLKSRLIFATNCRRFFHIIESDSTDMNDQRPGVKTLFQLLLILLLTTGNKVQAQDGASIFQQNCASCHSVNKDLTGPKLAGVESRGPWSDRKNLYAWIHNPVKFMQSNPYTQGLKQQFGGAMMTGFPQLSEKEIDAIVTYINKSASQVTAPAAGGGAAEGVKVDDSDSNILYGILTLILAIVALIMLQVNANLRKLADDKEGIPAREPIPFYRNKSYITLLTLLLFVVGGYFVVKGAINLGRTQGYEPEQPIYYSHKVHAGKNQISCLYCHGGAFEGKQANIPSLNTCMNCHMTINEYTGEKLFRADGTEVDGTAEIQKIYEHTGWDPTSRAYTGEGKPVEWIRIHNLPDHVYFNHSQHTVAGQVQCQTCHGEIQKMDEVKQFTELSMGWCINCHRETKVNFIDSSGTKGNQFYSIYEKYHDEIKRGVRDSVTVNDIGGTECQKCHY

Samples

Sample ID Description Type Environment
1 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
46 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
59 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
60 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
87 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
88 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
89 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
90 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
91 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
92 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
93 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
94 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
95 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
96 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
97 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
98 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
99 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
100 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
101 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
102 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
103 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
104 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
105 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
108 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
109 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
110 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
111 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
112 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
123 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
124 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
125 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
126 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
127 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
128 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
129 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
130 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
133 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
134 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
135 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
136 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
137 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
138 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
139 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
140 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
141 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
142 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
143 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
144 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
145 2738541278 Niastella sp. CF465 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.1
Metatranscriptomes 0.45
Isolates 0.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.6
Nodule 0
Rhizoplane 1.35
Rhizosphere 87.84
Stem 0
Stem Tuber 0
Unclassified 6.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070670_100127054 3300005331 Unclassified 2201
2 rootH1_10040509 3300003316 Bacteria 2621
3 rootH1_10097678 3300003316 Bacteria 1566
4 rootH2_10005628 3300003320 Bacteria 8853
5 rootL2_10040591 3300003322 Bacteria 3272
6 rootH1_10055464 3300003323 Bacteria 4242
7 Ga0070658_10028009 3300005327 Bacteria 4523
8 Ga0070666_10000126 3300005335 Bacteria 53667
9 Ga0070680_100011059 3300005336 Bacteria 6974
10 Ga0070682_100010831 3300005337 Bacteria 5189
11 Ga0068868_100025226 3300005338 Bacteria 4518
12 Ga0068868_100086553 3300005338 Bacteria 2519
13 Ga0070691_10000640 3300005341 Bacteria 13520
14 Ga0070675_100012602 3300005354 Bacteria 6631
15 Ga0070671_100070389 3300005355 Bacteria 2918
16 Ga0070667_100001797 3300005367 Bacteria 19092
17 Ga0070667_100027416 3300005367 Bacteria 4739
18 Ga0070681_10033532 3300005458 Bacteria 5155
19 Ga0070679_100009298 3300005530 Bacteria 9290
20 Ga0070684_100029015 3300005535 Bacteria 4685
21 Ga0068853_100075608 3300005539 Bacteria 2939
22 Ga0068853_100241785 3300005539 Bacteria 1655
23 Ga0070672_100064428 3300005543 Unclassified 2896
24 Ga0070693_100005484 3300005547 Bacteria 6101
25 Ga0068855_100000081 3300005563 Bacteria 115707
26 Ga0068855_100024714 3300005563 Bacteria 7187
27 Ga0068855_100053756 3300005563 Bacteria 4737
28 Ga0068855_100105187 3300005563 Bacteria 3245
29 Ga0068857_100016702 3300005577 Bacteria 6431
30 Ga0068857_100217050 3300005577 Bacteria 1746
31 Ga0068856_100015259 3300005614 Bacteria 7422
32 Ga0068852_100001315 3300005616 Bacteria 16622
33 Ga0068859_100000003 3300005617 Bacteria 479218
34 Ga0068864_100003471 3300005618 Bacteria 13018
35 Ga0068863_100021438 3300005841 Bacteria 6167
36 Ga0068858_100003985 3300005842 Bacteria 14573
37 Ga0068860_100001337 3300005843 Bacteria 26812
38 Ga0068860_100008404 3300005843 Bacteria 10283
39 Ga0068860_100024345 3300005843 Bacteria 5851
40 Ga0097621_100000092 3300006237 Bacteria 49439
41 Ga0068871_100000032 3300006358 Bacteria 73078
42 Ga0075431_100009031 3300006847 Bacteria 9994
43 Ga0097620_100000003 3300006931 Bacteria 479218
44 Ga0105240_10000106 3300009093 Bacteria 171825
45 Ga0105240_10010519 3300009093 Bacteria 12997
46 Ga0105240_10015259 3300009093 Bacteria 10453
47 Ga0105240_10024820 3300009093 Bacteria 7892
48 Ga0105240_10034550 3300009093 Bacteria 6521
49 Ga0105240_10086595 3300009093 Bacteria 3837
50 Ga0105240_10275845 3300009093 Bacteria 1934
51 Ga0111539_10023829 3300009094 Bacteria 7521
52 Ga0111539_10108547 3300009094 Bacteria 3257
53 Ga0105247_10004291 3300009101 Bacteria 9120
54 Ga0114129_10004788 3300009147 Bacteria 19131
55 Ga0105243_10026686 3300009148 Bacteria 4423
56 Ga0105241_10001117 3300009174 Bacteria 20448
57 Ga0105241_10003737 3300009174 Bacteria 11296
58 Ga0105241_10025195 3300009174 Unclassified 4421
59 Ga0105248_10013398 3300009177 Bacteria 9025
60 Ga0105237_10000855 3300009545 Bacteria 41395
61 Ga0105237_10002380 3300009545 Bacteria 23342
62 Ga0105237_10011076 3300009545 Bacteria 9559
63 Ga0105237_10030133 3300009545 Bacteria 5512
64 Ga0105237_10076030 3300009545 Bacteria 3349
65 Ga0105238_10009716 3300009551 Bacteria 9633
66 Ga0105238_10121836 3300009551 Bacteria 2587
67 Ga0105249_10014849 3300009553 Bacteria 6888
68 Ga0105249_10039090 3300009553 Bacteria 4307
69 Ga0105239_10002300 3300010375 Bacteria 24396
70 Ga0105239_10004005 3300010375 Bacteria 17844
71 Ga0105239_10054838 3300010375 Bacteria 4373
72 Ga0105239_10083061 3300010375 Bacteria 3527
73 Ga0105246_10028372 3300011119 Bacteria 3676
74 Ga0157373_10113170 3300013100 Bacteria 1907
75 Ga0157370_10001381 3300013104 Bacteria 30032
76 Ga0157370_10004529 3300013104 Bacteria 15925
77 Ga0157369_10035020 3300013105 Bacteria 5506
78 Ga0157374_10000011 3300013296 Bacteria 466749
79 Ga0157374_10038258 3300013296 Bacteria 4409
80 Ga0157378_10030001 3300013297 Bacteria 4803
81 Ga0163162_10014954 3300013306 Bacteria 7579
82 Ga0157372_10000171 3300013307 Bacteria 71956
83 Ga0157372_10000463 3300013307 Bacteria 44664
84 Ga0157372_10021254 3300013307 Bacteria 7010
85 Ga0157372_10194113 3300013307 Bacteria 2352
86 Ga0157372_10200166 3300013307 Bacteria 2313
87 Ga0157375_10000253 3300013308 Bacteria 48558
88 Ga0157375_10020759 3300013308 Bacteria 6010
89 Ga0157380_10080915 3300014326 Bacteria 2656
90 Ga0157380_10280650 3300014326 Bacteria 1524
91 Ga0157379_10048882 3300014968 Bacteria 3776
92 Ga0157376_10000714 3300014969 Bacteria 21474
93 Ga0157376_10000961 3300014969 Bacteria 18769
94 Ga0157376_10006794 3300014969 Bacteria 8100
95 Ga0206352_10318252 3300020078 Bacteria 4215
96 Ga0213876_10003744 3300021384 Bacteria 8626
97 Ga0209646_1002862 3300025246 Bacteria 3602
98 Ga0207680_10000385 3300025903 Bacteria 21073
99 Ga0207647_10045369 3300025904 Bacteria 2742
100 Ga0207705_10049734 3300025909 Unclassified 3017
101 Ga0207654_10000620 3300025911 Bacteria 20025
102 Ga0207654_10005253 3300025911 Bacteria 6538
103 Ga0207654_10039637 3300025911 Unclassified 2651
104 Ga0207707_10006526 3300025912 Bacteria 10186
105 Ga0207707_10040368 3300025912 Bacteria 4076
106 Ga0207695_10000087 3300025913 Bacteria 276412
107 Ga0207695_10003167 3300025913 Bacteria 23458
108 Ga0207695_10013294 3300025913 Bacteria 9821
109 Ga0207695_10091615 3300025913 Unclassified 3053
110 Ga0207695_10134127 3300025913 Bacteria 2431
111 Ga0207695_10135472 3300025913 Bacteria 2416
112 Ga0207695_10247407 3300025913 Bacteria 1683
113 Ga0207671_10001454 3300025914 Bacteria 27338
114 Ga0207671_10002324 3300025914 Bacteria 20513
115 Ga0207671_10002511 3300025914 Bacteria 19577
116 Ga0207671_10015685 3300025914 Bacteria 5922
117 Ga0207660_10098838 3300025917 Unclassified 2177
118 Ga0207652_10001428 3300025921 Bacteria 21177
119 Ga0207694_10018759 3300025924 Bacteria 5230
120 Ga0207694_10076227 3300025924 Unclassified 2626
121 Ga0207644_10063245 3300025931 Unclassified 2687
122 Ga0207691_10047968 3300025940 Unclassified 3917
123 Ga0207711_10065668 3300025941 Bacteria 3137
124 Ga0207689_10001807 3300025942 Bacteria 20189
125 Ga0207667_10000584 3300025949 Bacteria 47412
126 Ga0207667_10001242 3300025949 Bacteria 31953
127 Ga0207667_10017427 3300025949 Bacteria 8085
128 Ga0207667_10125367 3300025949 Unclassified 2645
129 Ga0207712_10001674 3300025961 Bacteria 14881
130 Ga0207640_10098239 3300025981 Bacteria 2046
131 Ga0207658_10008661 3300025986 Bacteria 6913
132 Ga0207702_10015087 3300026078 Bacteria 6406
133 Ga0207702_10092356 3300026078 Bacteria 2652
134 Ga0207641_10000026 3300026088 Bacteria 245091
135 Ga0207641_10010966 3300026088 Bacteria 7428
136 Ga0207676_10016775 3300026095 Bacteria 5302
137 Ga0207676_10117488 3300026095 Bacteria 2237
138 Ga0207674_10000453 3300026116 Bacteria 53589
139 Ga0207674_10052169 3300026116 Bacteria 4171
140 Ga0207683_10135828 3300026121 Bacteria 2214
141 Ga0207698_10003345 3300026142 Bacteria 9653
142 Ga0207698_10015899 3300026142 Bacteria 5058
143 Ga0207698_10138401 3300026142 Unclassified 2093
144 Ga0268266_10258189 3300028379 Unclassified 1614
145 Ga0268264_10001210 3300028381 Bacteria 24862
146 Ga0268264_10003832 3300028381 Bacteria 12897
147 Ga0268264_10004316 3300028381 Bacteria 12131
148 Ga0268264_10044940 3300028381 Bacteria 3666
149 Ga0307517_10000268 3300028786 Bacteria 89531
150 Ga0307515_10004954 3300028794 Bacteria 27162
151 Ga0307511_10001580 3300030521 Bacteria 24156
152 Ga0265327_10013631 3300031251 Bacteria 5388
153 Ga0307509_10131614 3300031507 Unclassified 2456
154 Ga0307508_10000111 3300031616 Bacteria 96733
155 Ga0307516_10000159 3300031730 Bacteria 84553
156 Ga0307516_10036432 3300031730 Bacteria 4923
157 Ga0436365_0450427 3300039437 Bacteria 29342
158 Ga0439436_0003152 3300041404 Bacteria 4999
159 Ga0439439_0017639 3300041406 Bacteria 1758
160 Ga0439449_0008621 3300042007 Bacteria 3870
161 Ga0439457_000079 3300042014 Bacteria 21395
162 Ga0439462_0004229 3300042015 Bacteria 3494
163 Ga0451577_0009186 3300042876 Bacteria 9537
164 Ga0466969_0000453 3300044656 Bacteria 22543
165 Ga0466972_0000080 3300044658 Bacteria 89226
166 Ga0466972_0013972 3300044658 Bacteria 4027
167 Ga0466966_0000096 3300044684 Bacteria 54307
168 Ga0466961_0077985 3300044693 Bacteria 2098
169 Ga0453684_0019697 3300044712 Bacteria 10244
170 Ga0453684_0070403 3300044712 Bacteria 4430
171 Ga0466957_0001278 3300044842 Bacteria 13115
172 Ga0466957_0003737 3300044842 Bacteria 8414
173 Ga0466959_0000014 3300045049 Bacteria 150962
174 Ga0495668_0009781 3300046616 Bacteria 5852
175 Ga0495672_0027626 3300047320 Bacteria 3602
176 Ga0496104_0120508 3300048907 Bacteria 2519
177 Ga0496105_0088477 3300048908 Bacteria 2559
178 Ga0496114_0022292 3300048917 Bacteria 5161
179 Ga0501031_0004581 3300049568 Bacteria 8967
180 Ga0501032_0004884 3300049569 Bacteria 10033
181 Ga0501033_0079345 3300049570 Bacteria 2409
182 Ga0501034_0000937 3300049571 Bacteria 42464
183 Ga0501034_0006265 3300049571 Bacteria 12798
184 Ga0501034_0015409 3300049571 Bacteria 7857
185 Ga0501036_0041125 3300049572 Bacteria 3912
186 Ga0501036_0072424 3300049572 Bacteria 2912
187 Ga0501037_0009866 3300049573 Bacteria 7006
188 Ga0501037_0014235 3300049573 Bacteria 5859
189 Ga0501038_0002256 3300049574 Bacteria 17927
190 Ga0501038_0003120 3300049574 Bacteria 15461
191 Ga0501039_0016490 3300049575 Bacteria 5659
192 Ga0501039_0268293 3300049575 Bacteria 1341
193 Ga0501046_0016052 3300049580 Bacteria 6278
194 Ga0501047_0008193 3300049581 Bacteria 9873
195 Ga0501068_0007366 3300049584 Bacteria 6093
196 Ga0501070_0007289 3300049586 Bacteria 9390
197 Ga0501074_0001847 3300049590 Bacteria 14526
198 Ga0501219_000403 3300049703 Bacteria 7211
199 Ga0501225_0001316 3300049705 Bacteria 7706
200 Ga0501080_0038123 3300049742 Bacteria 4488
201 Ga0501083_0007969 3300049744 Bacteria 7500
202 Ga0501241_009478 3300049758 Bacteria 1772
203 Ga0501035_0000916 3300049822 Bacteria 31216
204 Ga0501035_0001762 3300049822 Bacteria 21856
205 Ga0501035_0280118 3300049822 Bacteria 1409
206 Ga0501044_0003029 3300049823 Bacteria 19020
207 Ga0501044_0004698 3300049823 Bacteria 15272
208 Ga0501044_0010844 3300049823 Bacteria 9887
209 Ga0501045_0100209 3300049824 Bacteria 2144
210 Ga0501284_00002 3300050005 Bacteria 220402
211 nmdc:mga0k408_82950_c1 3300050493 Bacteria 1879
212 nmdc:mga05p37_3268_c1 3300050507 Bacteria 18878
213 nmdc:mga08y16_544482_c1 3300050511 Unclassified 1175
214 Ga0500578_0000325 3300053086 Bacteria 58251
215 Ga0500646_0002946 3300053090 Bacteria 4369
216 Ga0500583_0000001 3300053092 Bacteria 241642
217 Ga0500589_004139 3300053147 Bacteria 5394
218 Ga0500622_0066028 3300053156 Bacteria 1837
219 Ga0500570_096299 3300053724 Bacteria 1265
220 Ga0500587_003288 3300053739 Bacteria 2268
221 Ga0501084_0263028 3300054114 Bacteria 1456
222 2738725475 2738541278 Bacteria 9755573
223 Ga0070670_100127054
224 rootH1_10040509
225 rootH1_10097678
226 rootH2_10005628
227 rootL2_10040591
228 rootH1_10055464
229 Ga0070658_10028009
230 Ga0070666_10000126
231 Ga0070680_100011059
232 Ga0070682_100010831
233 Ga0068868_100025226
234 Ga0068868_100086553
235 Ga0070691_10000640
236 Ga0070675_100012602
237 Ga0070671_100070389
238 Ga0070667_100001797
239 Ga0070667_100027416
240 Ga0070681_10033532
241 Ga0070679_100009298
242 Ga0070684_100029015
243 Ga0068853_100075608
244 Ga0068853_100241785
245 Ga0070672_100064428
246 Ga0070693_100005484
247 Ga0068855_100000081
248 Ga0068855_100024714
249 Ga0068855_100053756
250 Ga0068855_100105187
251 Ga0068857_100016702
252 Ga0068857_100217050
253 Ga0068856_100015259
254 Ga0068852_100001315
255 Ga0068859_100000003
256 Ga0068864_100003471
257 Ga0068863_100021438
258 Ga0068858_100003985
259 Ga0068860_100001337
260 Ga0068860_100008404
261 Ga0068860_100024345
262 Ga0097621_100000092
263 Ga0068871_100000032
264 Ga0075431_100009031
265 Ga0097620_100000003
266 Ga0105240_10000106
267 Ga0105240_10010519
268 Ga0105240_10015259
269 Ga0105240_10024820
270 Ga0105240_10034550
271 Ga0105240_10086595
272 Ga0105240_10275845
273 Ga0111539_10023829
274 Ga0111539_10108547
275 Ga0105247_10004291
276 Ga0114129_10004788
277 Ga0105243_10026686
278 Ga0105241_10001117
279 Ga0105241_10003737
280 Ga0105241_10025195
281 Ga0105248_10013398
282 Ga0105237_10000855
283 Ga0105237_10002380
284 Ga0105237_10011076
285 Ga0105237_10030133
286 Ga0105237_10076030
287 Ga0105238_10009716
288 Ga0105238_10121836
289 Ga0105249_10014849
290 Ga0105249_10039090
291 Ga0105239_10002300
292 Ga0105239_10004005
293 Ga0105239_10054838
294 Ga0105239_10083061
295 Ga0105246_10028372
296 Ga0157373_10113170
297 Ga0157370_10001381
298 Ga0157370_10004529
299 Ga0157369_10035020
300 Ga0157374_10000011
301 Ga0157374_10038258
302 Ga0157378_10030001
303 Ga0163162_10014954
304 Ga0157372_10000171
305 Ga0157372_10000463
306 Ga0157372_10021254
307 Ga0157372_10194113
308 Ga0157372_10200166
309 Ga0157375_10000253
310 Ga0157375_10020759
311 Ga0157380_10080915
312 Ga0157380_10280650
313 Ga0157379_10048882
314 Ga0157376_10000714
315 Ga0157376_10000961
316 Ga0157376_10006794
317 Ga0206352_10318252
318 Ga0213876_10003744
319 Ga0209646_1002862
320 Ga0207680_10000385
321 Ga0207647_10045369
322 Ga0207705_10049734
323 Ga0207654_10000620
324 Ga0207654_10005253
325 Ga0207654_10039637
326 Ga0207707_10006526
327 Ga0207707_10040368
328 Ga0207695_10000087
329 Ga0207695_10003167
330 Ga0207695_10013294
331 Ga0207695_10091615
332 Ga0207695_10134127
333 Ga0207695_10135472
334 Ga0207695_10247407
335 Ga0207671_10001454
336 Ga0207671_10002324
337 Ga0207671_10002511
338 Ga0207671_10015685
339 Ga0207660_10098838
340 Ga0207652_10001428
341 Ga0207694_10018759
342 Ga0207694_10076227
343 Ga0207644_10063245
344 Ga0207691_10047968
345 Ga0207711_10065668
346 Ga0207689_10001807
347 Ga0207667_10000584
348 Ga0207667_10001242
349 Ga0207667_10017427
350 Ga0207667_10125367
351 Ga0207712_10001674
352 Ga0207640_10098239
353 Ga0207658_10008661
354 Ga0207702_10015087
355 Ga0207702_10092356
356 Ga0207641_10000026
357 Ga0207641_10010966
358 Ga0207676_10016775
359 Ga0207676_10117488
360 Ga0207674_10000453
361 Ga0207674_10052169
362 Ga0207683_10135828
363 Ga0207698_10003345
364 Ga0207698_10015899
365 Ga0207698_10138401
366 Ga0268266_10258189
367 Ga0268264_10001210
368 Ga0268264_10003832
369 Ga0268264_10004316
370 Ga0268264_10044940
371 Ga0307517_10000268
372 Ga0307515_10004954
373 Ga0307511_10001580
374 Ga0265327_10013631
375 Ga0307509_10131614
376 Ga0307508_10000111
377 Ga0307516_10000159
378 Ga0307516_10036432
379 Ga0436365_0450427
380 Ga0439436_0003152
381 Ga0439439_0017639
382 Ga0439449_0008621
383 Ga0439457_000079
384 Ga0439462_0004229
385 Ga0451577_0009186
386 Ga0466969_0000453
387 Ga0466972_0000080
388 Ga0466972_0013972
389 Ga0466966_0000096
390 Ga0466961_0077985
391 Ga0453684_0019697
392 Ga0453684_0070403
393 Ga0466957_0001278
394 Ga0466957_0003737
395 Ga0466959_0000014
396 Ga0495668_0009781
397 Ga0495672_0027626
398 Ga0496104_0120508
399 Ga0496105_0088477
400 Ga0496114_0022292
401 Ga0501031_0004581
402 Ga0501032_0004884
403 Ga0501033_0079345
404 Ga0501034_0000937
405 Ga0501034_0006265
406 Ga0501034_0015409
407 Ga0501036_0041125
408 Ga0501036_0072424
409 Ga0501037_0009866
410 Ga0501037_0014235
411 Ga0501038_0002256
412 Ga0501038_0003120
413 Ga0501039_0016490
414 Ga0501039_0268293
415 Ga0501046_0016052
416 Ga0501047_0008193
417 Ga0501068_0007366
418 Ga0501070_0007289
419 Ga0501074_0001847
420 Ga0501219_000403
421 Ga0501225_0001316
422 Ga0501080_0038123
423 Ga0501083_0007969
424 Ga0501241_009478
425 Ga0501035_0000916
426 Ga0501035_0001762
427 Ga0501035_0280118
428 Ga0501044_0003029
429 Ga0501044_0004698
430 Ga0501044_0010844
431 Ga0501045_0100209
432 Ga0501284_00002
433 nmdc:mga0k408_82950_c1
434 nmdc:mga05p37_3268_c1
435 nmdc:mga08y16_544482_c1
436 Ga0500578_0000325
437 Ga0500646_0002946
438 Ga0500583_0000001
439 Ga0500589_004139
440 Ga0500622_0066028
441 Ga0500570_096299
442 Ga0500587_003288
443 Ga0501084_0263028
444 2738725475

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00034

Cytochrom_C

Cytochrome c

53

145

0.9

PF13442

Cytochrome_CBB3

Cytochrome C oxidase, cbb3-type, subunit III

51

141

0.66

Map