F334051

General Info

Members Datasets Scaffolds Average Seq Length
222 177 111 390

Family's Representative Sequence

Representative Sequence 3300003775|Ga0055524_1009440|Ga0055524_10094402
Length 412
Sequence LISQSEISIDYLASDHALLGEKEDTMKDLTHCVVTPSVKTEGFVPLGIGVHRASTIVFQTAEDYADRGRRGPDGYSYGLYGTPTTRTLETKLTALEKGARTFLVPSGQAANTIAMLPFLKAGDRVLIADSVYPPVRDFANMELVRFGIEVVYYDPVDPSDLEAKINARTKIVWCESPGSTTMEIQDLPAITDIAHRHGALVGCDNTWATPLNYKPLTLGADIVTEGLTKYISGHSDVLLGSLTVRDEKLTVPIRSVLGRMGISVSPDDASLVLRGFETLGVRMNHASQGALQLIERIQAADIVDRVIHPALPTDPGHSVWKRDFHGASGVFGVVFRQGLSDRVSPALNVLKTFAIGASWGGTRSLVAPMPVKAYRTVRRWDADDLVLRISVGLEDHQDLVDDIEALLEEISR

Samples

Sample ID Description Type Environment
1 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
2 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
3 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
4 2551306084 Sinorhizobium meliloti 5A14 Isolate Nodule
5 2551306085 Sinorhizobium meliloti AE608H Isolate Nodule
6 2551306087 Sinorhizobium meliloti A0643DD Isolate Nodule
7 2551306090 Sinorhizobium meliloti A0641M Isolate Nodule
8 2551306091 Sinorhizobium meliloti C0431A Isolate Nodule
9 2551306093 Sinorhizobium meliloti C0438LL Isolate Nodule
10 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
11 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
12 2643221558 Rhizobium sp. Root149 Isolate Unclassified
13 2643221618 Ensifer sp. Root231 Isolate Unclassified
14 2643221626 Ensifer sp. Root31 Isolate Unclassified
15 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
16 2643221655 Ensifer sp. Root1252 Isolate Unclassified
17 2643221659 Ensifer sp. Root127 Isolate Unclassified
18 2643221668 Ensifer sp. Root423 Isolate Unclassified
19 2643221688 Rhizobium sp. Root482 Isolate Unclassified
20 2643221698 Ensifer sp. Root142 Isolate Unclassified
21 2643221712 Ensifer sp. Root258 Isolate Unclassified
22 2643221719 Rhizobium sp. Root274 Isolate Unclassified
23 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
24 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
25 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
26 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
27 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
28 2838074704 Sinorhizobium terangae SEMIA 6460 Isolate Unclassified
29 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
30 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
31 2848992105 Sinorhizobium fredii CCBAU 25509 Isolate Unclassified
32 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
33 2855730933 Achromobacter sp. HZ28 Isolate Nodule
34 2855767633 Achromobacter sp. HZ34 Isolate Nodule
35 2855825444 Sinorhizobium meliloti CXM1-105 Isolate Nodule
36 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
37 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
38 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
39 2916007675 Sinorhizobium meliloti USDA1289 Isolate Nodule
40 2916014648 Sinorhizobium meliloti USDA1583 Isolate Nodule
41 2916068649 Sinorhizobium meliloti USDA1220 Isolate Nodule
42 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
43 2921237296 Sinorhizobium meliloti USDA1508 Isolate Nodule
44 2921289301 Sinorhizobium meliloti USDA1730 Isolate Nodule
45 2921296804 Sinorhizobium meliloti USDA1200 Isolate Nodule
46 2924158325 Sinorhizobium meliloti USDA1146 Isolate Nodule
47 2924186466 Sinorhizobium meliloti USDA1389 Isolate Nodule
48 2924207177 Sinorhizobium meliloti USDA1589 Isolate Nodule
49 2924221636 Sinorhizobium meliloti USDA1416 Isolate Nodule
50 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
51 2937002841 Sinorhizobium meliloti USDA1006 Isolate Nodule
52 2937063883 Sinorhizobium meliloti USDA1808 Isolate Nodule
53 2937098957 Sinorhizobium meliloti USDA1519 Isolate Nodule
54 2937113482 Sinorhizobium meliloti USDA1180 Isolate Nodule
55 2941499720 Ensifer sp. 4252 Isolate Rhizosphere
56 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere
57 2957388812 Sinorhizobium meliloti USDA1195 Isolate Nodule
58 2957422303 Sinorhizobium meliloti USDA1497 Isolate Nodule
59 2957430029 Sinorhizobium meliloti USDA1590 Isolate Nodule
60 2957437181 Sinorhizobium medicae USDA1694 Isolate Nodule
61 2957450854 Sinorhizobium meliloti USDA1655 Isolate Nodule
62 2957471148 Sinorhizobium meliloti USDA1204 Isolate Nodule
63 2957484790 Sinorhizobium meliloti USDA1464 Isolate Nodule
64 2957491536 Sinorhizobium meliloti USDA1804 Isolate Nodule
65 2957498199 Sinorhizobium meliloti USDA1561 Isolate Nodule
66 2957505466 Sinorhizobium meliloti USDA1696 Isolate Nodule
67 2960591022 Sinorhizobium medicae USDA1066 Isolate Nodule
68 2960597568 Sinorhizobium meliloti 3085 Isolate Nodule
69 2960603979 Sinorhizobium meliloti USDA1580 Isolate Nodule
70 2960624210 Sinorhizobium meliloti USDA1415 Isolate Nodule
71 2960631154 Sinorhizobium medicae USDA1629 Isolate Nodule
72 2960667422 Sinorhizobium meliloti USDA1170 Isolate Nodule
73 2960674078 Sinorhizobium meliloti USDA1666 Isolate Nodule
74 2960687367 Sinorhizobium meliloti USDA1462 Isolate Nodule
75 2964663802 Sinorhizobium meliloti USDA1688 Isolate Nodule
76 2964678106 Sinorhizobium meliloti USDA1210 Isolate Nodule
77 2964691889 Sinorhizobium meliloti USDA1379 Isolate Nodule
78 2964712639 Sinorhizobium meliloti USDA1616 Isolate Nodule
79 2967678726 Sinorhizobium meliloti USDA1467 Isolate Nodule
80 2967693043 Sinorhizobium meliloti USDA1183 Isolate Nodule
81 2967699805 Sinorhizobium meliloti USDA1695 Isolate Nodule
82 2967706974 Sinorhizobium meliloti USDA1206 Isolate Nodule
83 2967742019 Sinorhizobium meliloti USDA1676 Isolate Nodule
84 2970019648 Sinorhizobium meliloti USDA1603 Isolate Nodule
85 2970047711 Sinorhizobium meliloti USDA1793 Isolate Nodule
86 2970061556 Sinorhizobium meliloti USDA1810 Isolate Nodule
87 2970076120 Sinorhizobium meliloti USDA1706 Isolate Nodule
88 2970109326 Sinorhizobium meliloti USDA1186 Isolate Nodule
89 2970129317 Sinorhizobium meliloti USDA1008 Isolate Nodule
90 2970136068 Sinorhizobium meliloti USDA1699 Isolate Nodule
91 2970149975 Sinorhizobium meliloti USDA1215 Isolate Nodule
92 2970164137 Sinorhizobium meliloti USDA1018 Isolate Nodule
93 2970170962 Sinorhizobium meliloti USDA1571 Isolate Nodule
94 2970177841 Sinorhizobium meliloti USDA1533 Isolate Nodule
95 2970191845 Sinorhizobium meliloti USDA1187 Isolate Nodule
96 2977537788 Sinorhizobium meliloti USDA1184 Isolate Nodule
97 2977551784 Sinorhizobium meliloti USDA1035 Isolate Nodule
98 2977572785 Sinorhizobium meliloti USDA1767 Isolate Nodule
99 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
100 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere
101 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
102 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
103 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
104 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
105 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
106 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
107 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
108 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
109 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
110 3300009766 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule Metagenome Nodule
111 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
112 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
113 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
114 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
115 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
116 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
117 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
118 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
119 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
120 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
124 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
125 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
126 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
127 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
128 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
129 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
130 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
131 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
132 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
133 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
134 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
135 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
136 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
137 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
138 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
139 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
140 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
141 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
142 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
143 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
144 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
145 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
146 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
147 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
148 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
149 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
161 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
162 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
163 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
164 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
167 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
168 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
169 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
170 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
171 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
172 648276728 Sinorhizobium meliloti BL225C Isolate Nodule
173 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
174 8005289223 Rhizobium bangladeshense 1002 Isolate Nodule
175 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
176 8005688590 Rhizobium bangladeshense 1024 Isolate Nodule
177 8054002106 Azospirillum lipoferum 59b Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 50
Metatranscriptomes 0
Isolates 50

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.61
Nodule 35.14
Rhizoplane 4.95
Rhizosphere 18.47
Stem 0
Stem Tuber 0
Unclassified 28.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1000792 3300002773 Bacteria 15859
2 JGI25151J46595_10000670 3300003187 Bacteria 28986
3 JGI25151J46595_10009014 3300003187 Bacteria 4756
4 Ga0055526_1025310 3300003771 Bacteria 1907
5 Ga0055524_1002852 3300003775 Bacteria 8668
6 Ga0055524_1009440 3300003775 Bacteria 3965
7 Ga0055528_1001230 3300003790 Bacteria 16331
8 Ga0070679_100052820 3300005530 Bacteria 4046
9 Ga0070696_100029686 3300005546 Bacteria 3740
10 Ga0079104_1001544 3300006946 Bacteria 15132
11 Ga0123342_1004047 3300009766 Bacteria 22851
12 Ga0228711_1005756 3300022739 Bacteria 18764
13 Ga0228710_1005951 3300022740 Bacteria 18765
14 Ga0209129_1000828 3300025258 Bacteria 19474
15 Ga0209673_1001911 3300025273 Bacteria 16646
16 Ga0209673_1006912 3300025273 Bacteria 5369
17 Ga0209673_1013388 3300025273 Unclassified 3238
18 Ga0209673_1014770 3300025273 Bacteria 3006
19 Ga0209130_1002998 3300025284 Bacteria 7649
20 Ga0209025_1000055 3300025294 Bacteria 316748
21 Ga0209025_1000062 3300025294 Bacteria 304236
22 Ga0209564_1003138 3300025295 Bacteria 11653
23 Ga0209564_1021653 3300025295 Bacteria 2301
24 Ga0209564_1027146 3300025295 Unclassified 1868
25 Ga0209564_1034294 3300025295 Bacteria 1491
26 Ga0209256_1007622 3300025299 Bacteria 5275
27 Ga0209256_1010254 3300025299 Bacteria 3954
28 Ga0209256_1014845 3300025299 Bacteria 2767
29 Ga0207426_1002023 3300025302 Bacteria 14290
30 Ga0207707_10069032 3300025912 Bacteria 3080
31 Ga0207652_10219254 3300025921 Bacteria 1714
32 Ga0207678_10055608 3300026067 Bacteria 3409
33 Ga0209281_1001362 3300027111 Bacteria 15112
34 Ga0395900_0054641 3300037418 Bacteria 4112
35 Ga0395901_0155957 3300038443 Bacteria 2398
36 Ga0451853_2454348 3300041512 Bacteria 55590
37 Ga0495638_0014456 3300046460 Bacteria 5333
38 Ga0495607_0000130 3300046501 Bacteria 80479
39 Ga0495668_0116370 3300046616 Bacteria 1462
40 Ga0495672_0029839 3300047320 Bacteria 3428
41 Ga0495686_0016549 3300047472 Bacteria 4999
42 Ga0495626_0059319 3300048091 Bacteria 1746
43 Ga0496101_0120632 3300048904 Unclassified 1982
44 Ga0496102_0025765 3300048905 Bacteria 5237
45 Ga0496103_0052567 3300048906 Bacteria 2523
46 Ga0496105_0015502 3300048908 Bacteria 6075
47 Ga0496106_0000155 3300048909 Bacteria 50465
48 Ga0496106_0000365 3300048909 Bacteria 32006
49 Ga0496106_0075989 3300048909 Bacteria 2574
50 Ga0496110_0068748 3300048913 Plasmid 3135
51 Ga0496112_0370487 3300048915 Unclassified 1374
52 Ga0496116_0001589 3300048919 Bacteria 24997
53 Ga0496116_0001693 3300048919 Bacteria 24141
54 Ga0496116_0005490 3300048919 Bacteria 11739
55 Ga0496116_0144625 3300048919 Unclassified 1331
56 Ga0496117_0001170 3300048920 Bacteria 39451
57 Ga0496120_0019119 3300048923 Bacteria 4391
58 Ga0496121_0000001 3300048924 Bacteria 1830318
59 Ga0496121_0001176 3300048924 Bacteria 45820
60 Ga0496121_0011796 3300048924 Bacteria 9630
61 Ga0496121_0019465 3300048924 Bacteria 6786
62 Ga0496121_0041067 3300048924 Bacteria 4049
63 Ga0496122_0002488 3300048925 Bacteria 26045
64 Ga0496122_0004331 3300048925 Bacteria 17757
65 Ga0496122_0028295 3300048925 Bacteria 4761
66 Ga0496122_0035655 3300048925 Bacteria 4041
67 Ga0496122_0046837 3300048925 Bacteria 3344
68 Ga0496123_0002044 3300048926 Bacteria 26045
69 Ga0496123_0002928 3300048926 Bacteria 19964
70 Ga0496123_0030656 3300048926 Bacteria 3932
71 Ga0496124_0000442 3300048927 Bacteria 73411
72 Ga0496124_0000841 3300048927 Bacteria 50089
73 Ga0496124_0002797 3300048927 Bacteria 22104
74 Ga0496124_0007506 3300048927 Bacteria 11581
75 Ga0496124_0009231 3300048927 Bacteria 10172
76 Ga0496124_0044612 3300048927 Unclassified 3803
77 Ga0496125_0000001 3300048928 Bacteria 1766138
78 Ga0496125_0002193 3300048928 Bacteria 26079
79 Ga0496125_0004674 3300048928 Bacteria 15611
80 Ga0496125_0018944 3300048928 Bacteria 6514
81 Ga0496125_0023846 3300048928 Bacteria 5639
82 Ga0496125_0029744 3300048928 Bacteria 4902
83 Ga0496126_0050125 3300048929 Bacteria 3806
84 Ga0496126_0105014 3300048929 Unclassified 2467
85 Ga0501031_0001049 3300049568 Bacteria 16763
86 Ga0501032_0004247 3300049569 Bacteria 10823
87 Ga0501033_0031912 3300049570 Bacteria 3954
88 Ga0501034_0022544 3300049571 Bacteria 6416
89 Ga0501037_0006586 3300049573 Bacteria 8494
90 Ga0501038_0021182 3300049574 Bacteria 5839
91 Ga0501039_0001228 3300049575 Bacteria 18804
92 Ga0501040_0019199 3300049576 Bacteria 4546
93 Ga0501043_0002040 3300049579 Bacteria 17227
94 Ga0501046_0010984 3300049580 Bacteria 7764
95 Ga0501047_0002531 3300049581 Bacteria 17427
96 Ga0501047_0004132 3300049581 Bacteria 13664
97 Ga0501068_0057957 3300049584 Bacteria 2349
98 Ga0501070_0019804 3300049586 Bacteria 5642
99 Ga0501072_0199107 3300049588 Bacteria 1597
100 Ga0501076_0187157 3300049592 Bacteria 1689
101 Ga0501035_0003440 3300049822 Bacteria 15149
102 Ga0501044_0001082 3300049823 Bacteria 32531
103 Ga0501044_0006410 3300049823 Bacteria 13004
104 Ga0501044_0200358 3300049823 Bacteria 1955
105 Ga0501045_0009113 3300049824 Bacteria 6932
106 Ga0500658_0004697 3300053134 Bacteria 5097
107 Ga0500568_0001009 3300053139 Bacteria 19295
108 Ga0500568_0059706 3300053139 Bacteria 1479
109 Ga0500588_0000135 3300053146 Bacteria 9824
110 Ga0500633_0008862 3300053160 Bacteria 2615
111 Ga0530510_0162918 3300061734 Bacteria 1650

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2840764183 2840768824 353
2 3300048915 Ga0496112_0370487 Ga0496112_0370487_276_1352 358
3 iso_pu_bacteria 2957498199 2957499290 363
4 iso_pu_bacteria 2924158325 2924165192 364
5 iso_pu_bacteria 2937098957 2937099786 364
6 iso_pu_bacteria 2967678726 2967679730 364
7 iso_pu_bacteria 2970019648 2970020692 364
8 iso_pu_bacteria 2977551784 2977558609 364
9 iso_pu_bacteria 2989776772 2989777295 364
10 3300009766 Ga0123342_1004047 Ga0123342_100404725 365
11 3300053139 Ga0500568_0059706 Ga0500568_0059706_332_1465 365
12 3300048909 Ga0496106_0000365 Ga0496106_0000365_19912_21126 366
13 3300048919 Ga0496116_0005490 Ga0496116_0005490_4934_6229 366
14 3300048927 Ga0496124_0009231 Ga0496124_0009231_3221_4516 366
15 3300049568 Ga0501031_0001049 Ga0501031_0001049_6191_7399 366
16 3300049569 Ga0501032_0004247 Ga0501032_0004247_9389_10597 366
17 3300049571 Ga0501034_0022544 Ga0501034_0022544_1294_2502 366
18 3300049573 Ga0501037_0006586 Ga0501037_0006586_4367_5575 366
19 3300049574 Ga0501038_0021182 Ga0501038_0021182_1296_2504 366
20 3300049575 Ga0501039_0001228 Ga0501039_0001228_6710_7918 366
21 3300049579 Ga0501043_0002040 Ga0501043_0002040_6450_7658 366
22 3300049580 Ga0501046_0010984 Ga0501046_0010984_367_1575 366
23 3300049581 Ga0501047_0004132 Ga0501047_0004132_4067_5275 366
24 3300049584 Ga0501068_0057957 Ga0501068_0057957_324_1532 366
25 3300049586 Ga0501070_0019804 Ga0501070_0019804_217_1425 366
26 3300049823 Ga0501044_0006410 Ga0501044_0006410_7509_8717 366
27 3300049824 Ga0501045_0009113 Ga0501045_0009113_4210_5418 366
28 3300053134 Ga0500658_0004697 Ga0500658_0004697_3225_4439 366
29 3300053139 Ga0500568_0001009 Ga0500568_0001009_10854_12068 366
30 3300053160 Ga0500633_0008862 Ga0500633_0008862_284_1498 366
31 3300049570 Ga0501033_0031912 Ga0501033_0031912_2774_3889 367
32 3300048919 Ga0496116_0001589 Ga0496116_0001589_13196_14392 368
33 3300048924 Ga0496121_0011796 Ga0496121_0011796_6949_8145 368
34 3300048925 Ga0496122_0004331 Ga0496122_0004331_1768_2964 368
35 3300048926 Ga0496123_0002928 Ga0496123_0002928_5282_6478 368
36 3300048927 Ga0496124_0007506 Ga0496124_0007506_4137_5333 368
37 3300048928 Ga0496125_0029744 Ga0496125_0029744_2516_3712 368
38 3300037418 Ga0395900_0054641 Ga0395900_0054641_1119_2327 371
39 3300038443 Ga0395901_0155957 Ga0395901_0155957_487_1695 371
40 3300046460 Ga0495638_0014456 Ga0495638_0014456_3270_4475 371
41 3300048923 Ga0496120_0019119 Ga0496120_0019119_1514_2728 371
42 3300048924 Ga0496121_0000001 Ga0496121_0000001_1556164_1557378 371
43 3300048925 Ga0496122_0028295 Ga0496122_0028295_3408_4622 371
44 3300048926 Ga0496123_0030656 Ga0496123_0030656_1017_2231 371
45 3300048928 Ga0496125_0000001 Ga0496125_0000001_1715257_1716471 371
46 3300048925 Ga0496122_0046837 Ga0496122_0046837_909_2096 372
47 3300048929 Ga0496126_0050125 Ga0496126_0050125_363_1577 372
48 3300049823 Ga0501044_0200358 Ga0501044_0200358_222_1451 372
49 3300003187 JGI25151J46595_10000670 JGI25151J46595_1000067016 373
50 3300025294 Ga0209025_1000055 Ga0209025_100005528 373
51 3300048927 Ga0496124_0000841 Ga0496124_0000841_6496_7728 375
52 3300048928 Ga0496125_0023846 Ga0496125_0023846_3787_4983 377
53 iso_pu_bacteria 2855767633 2855773676 377
54 3300048920 Ga0496117_0001170 Ga0496117_0001170_7297_8511 378
55 3300048928 Ga0496125_0002193 Ga0496125_0002193_20727_21941 378
56 3300048909 Ga0496106_0075989 Ga0496106_0075989_1100_2242 380
57 3300048924 Ga0496121_0041067 Ga0496121_0041067_2281_3423 380
58 iso_pu_bacteria 2617270742 2617385826 381
59 iso_pu_bacteria 2738541317 2738946032 382
60 iso_pu_bacteria 2913308742 2913311385 382
61 iso_pu_bacteria 2510917026 2511173105 383
62 iso_pu_bacteria 2643221668 2644381184 383
63 iso_pu_bacteria 2643221688 2644492750 383
64 iso_pu_bacteria 2854896431 2854896658 383
65 iso_pu_bacteria 2857531043 2857533346 383
66 iso_pu_bacteria 2919171160 2919177414 383
67 iso_pu_bacteria 2937113482 2937113929 383
68 iso_pu_bacteria 2941499720 2941506336 383
69 iso_pu_bacteria 2957491536 2957492593 383
70 iso_pu_bacteria 2960597568 2960601735 383
71 iso_pu_bacteria 2960667422 2960671691 383
72 iso_pu_bacteria 2960674078 2960680495 383
73 iso_pu_bacteria 2964712639 2964714543 383
74 iso_pu_bacteria 2970076120 2970077621 383
75 3300005546 Ga0070696_100029686 Ga0070696_1000296862 384
76 3300053146 Ga0500588_0000135 Ga0500588_0000135_1646_2899 384
77 iso_pu_bacteria 2513237144 2513913857 384
78 iso_pu_bacteria 2643221653 2644297761 384
79 iso_pu_bacteria 2643221719 2644656014 384
80 iso_pu_bacteria 2767802442 2770200043 384
81 iso_pu_bacteria 2775506902 2776267495 384
82 iso_pu_bacteria 2775506904 2776281363 384
83 iso_pu_bacteria 2838074704 2838076054 384
84 iso_pu_bacteria 8005246636 8005247535 384
85 3300005530 Ga0070679_100052820 Ga0070679_1000528203 385
86 3300025912 Ga0207707_10069032 Ga0207707_100690322 385
87 3300025921 Ga0207652_10219254 Ga0207652_102192542 385
88 iso_pu_bacteria 2534681796 2535517588 385
89 iso_pu_bacteria 2551306084 2551681094 385
90 iso_pu_bacteria 2551306085 2551688205 385
91 iso_pu_bacteria 2551306087 2551697461 385
92 iso_pu_bacteria 2551306090 2551719055 385
93 iso_pu_bacteria 2551306091 2551730049 385
94 iso_pu_bacteria 2551306093 2551743066 385
95 iso_pu_bacteria 2643221558 2643810601 385
96 iso_pu_bacteria 2643221688 2644493010 385
97 iso_pu_bacteria 2791355082 2792584979 385
98 iso_pu_bacteria 2848992105 2848998616 385
99 iso_pu_bacteria 2855825444 2855831144 385
100 iso_pu_bacteria 2881412998 2881417518 385
101 iso_pu_bacteria 2916007675 2916009135 385
102 iso_pu_bacteria 2916014648 2916015865 385
103 iso_pu_bacteria 2916068649 2916071719 385
104 iso_pu_bacteria 2919171160 2919177395 385
105 iso_pu_bacteria 2921237296 2921238308 385
106 iso_pu_bacteria 2921289301 2921291199 385
107 iso_pu_bacteria 2921296804 2921303941 385
108 iso_pu_bacteria 2924186466 2924191218 385
109 iso_pu_bacteria 2924207177 2924213947 385
110 iso_pu_bacteria 2924221636 2924222939 385
111 iso_pu_bacteria 2929138655 2929140245 385
112 iso_pu_bacteria 2937002841 2937003475 385
113 iso_pu_bacteria 2937063883 2937065568 385
114 iso_pu_bacteria 2941499720 2941506902 385
115 iso_pu_bacteria 2954011201 2954012738 385
116 iso_pu_bacteria 2957388812 2957394627 385
117 iso_pu_bacteria 2957422303 2957422990 385
118 iso_pu_bacteria 2957430029 2957430421 385
119 iso_pu_bacteria 2957437181 2957438017 385
120 iso_pu_bacteria 2957450854 2957454983 385
121 iso_pu_bacteria 2957471148 2957472531 385
122 iso_pu_bacteria 2957484790 2957485744 385
123 iso_pu_bacteria 2957505466 2957509770 385
124 iso_pu_bacteria 2960591022 2960592916 385
125 iso_pu_bacteria 2960603979 2960604834 385
126 iso_pu_bacteria 2960603979 2960604990 385
127 iso_pu_bacteria 2960624210 2960625424 385
128 iso_pu_bacteria 2960631154 2960634248 385
129 iso_pu_bacteria 2960687367 2960687787 385
130 iso_pu_bacteria 2964663802 2964670775 385
131 iso_pu_bacteria 2964678106 2964679962 385
132 iso_pu_bacteria 2964691889 2964692603 385
133 iso_pu_bacteria 2967693043 2967699474 385
134 iso_pu_bacteria 2967699805 2967700661 385
135 iso_pu_bacteria 2967706974 2967714334 385
136 iso_pu_bacteria 2967742019 2967742920 385
137 iso_pu_bacteria 2970047711 2970048576 385
138 iso_pu_bacteria 2970061556 2970062859 385
139 iso_pu_bacteria 2970109326 2970116229 385
140 iso_pu_bacteria 2970129317 2970135537 385
141 iso_pu_bacteria 2970136068 2970137373 385
142 iso_pu_bacteria 2970149975 2970156782 385
143 iso_pu_bacteria 2970164137 2970170359 385
144 iso_pu_bacteria 2970170962 2970171673 385
145 iso_pu_bacteria 2970177841 2970178312 385
146 iso_pu_bacteria 2970191845 2970199002 385
147 iso_pu_bacteria 2977537788 2977544287 385
148 iso_pu_bacteria 2977572785 2977579556 385
149 iso_pu_bacteria 3005409236 3005413325 385
150 iso_pu_bacteria 3005445848 3005452497 385
151 iso_pu_bacteria 648276728 648741509 385
152 iso_pu_bacteria 8005289223 8005294035 385
153 iso_pu_bacteria 8005542996 8005549614 385
154 iso_pu_bacteria 8005688590 8005693235 385
155 iso_pu_bacteria 8054002106 8054007053 385
156 3300049576 Ga0501040_0019199 Ga0501040_0019199_1822_3003 386
157 3300049588 Ga0501072_0199107 Ga0501072_0199107_368_1549 386
158 3300049592 Ga0501076_0187157 Ga0501076_0187157_292_1473 386
159 3300061734 Ga0530510_0162918 Ga0530510_0162918_48_1229 386
160 3300003775 Ga0055524_1009440 Ga0055524_10094402 387
161 3300025273 Ga0209673_1006912 Ga0209673_10069124 387
162 3300025273 Ga0209673_1014770 Ga0209673_10147703 387
163 3300025295 Ga0209564_1003138 Ga0209564_10031383 387
164 3300025295 Ga0209564_1034294 Ga0209564_10342942 387
165 3300025299 Ga0209256_1010254 Ga0209256_10102543 387
166 3300025299 Ga0209256_1014845 Ga0209256_10148453 387
167 3300041512 Ga0451853_2454348 Ga0451853_2454348_33463_34626 387
168 3300048909 Ga0496106_0000155 Ga0496106_0000155_46188_47351 387
169 3300048927 Ga0496124_0000442 Ga0496124_0000442_58438_59601 387
170 3300048927 Ga0496124_0002797 Ga0496124_0002797_2846_4027 387
171 iso_pu_bacteria 2842775625 2842779115 388
172 3300002773 JGI25152J39213_1000792 JGI25152J39213_100079212 389
173 3300003187 JGI25151J46595_10009014 JGI25151J46595_100090143 389
174 3300003771 Ga0055526_1025310 Ga0055526_10253102 389
175 3300003775 Ga0055524_1002852 Ga0055524_100285211 389
176 3300003790 Ga0055528_1001230 Ga0055528_10012307 389
177 3300006946 Ga0079104_1001544 Ga0079104_10015445 389
178 3300022739 Ga0228711_1005756 Ga0228711_100575622 389
179 3300022740 Ga0228710_1005951 Ga0228710_10059514 389
180 3300025258 Ga0209129_1000828 Ga0209129_10008288 389
181 3300025273 Ga0209673_1001911 Ga0209673_100191118 389
182 3300025273 Ga0209673_1013388 Ga0209673_10133884 389
183 3300025284 Ga0209130_1002998 Ga0209130_10029982 389
184 3300025294 Ga0209025_1000062 Ga0209025_1000062121 389
185 3300025295 Ga0209564_1021653 Ga0209564_10216532 389
186 3300025295 Ga0209564_1027146 Ga0209564_10271462 389
187 3300025299 Ga0209256_1007622 Ga0209256_10076222 389
188 3300025302 Ga0207426_1002023 Ga0207426_10020239 389
189 3300026067 Ga0207678_10055608 Ga0207678_100556084 389
190 3300027111 Ga0209281_1001362 Ga0209281_100136213 389
191 3300046501 Ga0495607_0000130 Ga0495607_0000130_53699_54886 389
192 3300046616 Ga0495668_0116370 Ga0495668_0116370_212_1381 389
193 3300047320 Ga0495672_0029839 Ga0495672_0029839_1072_2283 389
194 3300047472 Ga0495686_0016549 Ga0495686_0016549_327_1526 389
195 3300048091 Ga0495626_0059319 Ga0495626_0059319_17_1204 389
196 3300048904 Ga0496101_0120632 Ga0496101_0120632_404_1573 389
197 3300048905 Ga0496102_0025765 Ga0496102_0025765_3080_4249 389
198 3300048906 Ga0496103_0052567 Ga0496103_0052567_1033_2202 389
199 3300048908 Ga0496105_0015502 Ga0496105_0015502_3535_4704 389
200 3300048913 Ga0496110_0068748 Ga0496110_0068748_1570_2739 389
201 3300048919 Ga0496116_0001693 Ga0496116_0001693_12302_13492 389
202 3300048919 Ga0496116_0144625 Ga0496116_0144625_41_1225 389
203 3300048924 Ga0496121_0001176 Ga0496121_0001176_12550_13740 389
204 3300048924 Ga0496121_0019465 Ga0496121_0019465_1061_2251 389
205 3300048925 Ga0496122_0002488 Ga0496122_0002488_4133_5347 389
206 3300048925 Ga0496122_0035655 Ga0496122_0035655_1783_2952 389
207 3300048926 Ga0496123_0002044 Ga0496123_0002044_4133_5347 389
208 3300048927 Ga0496124_0044612 Ga0496124_0044612_1485_2675 389
209 3300048928 Ga0496125_0004674 Ga0496125_0004674_2690_3886 389
210 3300048928 Ga0496125_0018944 Ga0496125_0018944_4344_5513 389
211 3300048929 Ga0496126_0105014 Ga0496126_0105014_1090_2259 389
212 3300049581 Ga0501047_0002531 Ga0501047_0002531_3522_4706 389
213 3300049822 Ga0501035_0003440 Ga0501035_0003440_8528_9712 389
214 3300049823 Ga0501044_0001082 Ga0501044_0001082_29257_30441 389
215 iso_pu_bacteria 2599185236 2599722762 389
216 iso_pu_bacteria 2643221618 2644106891 389
217 iso_pu_bacteria 2643221626 2644149673 389
218 iso_pu_bacteria 2643221655 2644311280 389
219 iso_pu_bacteria 2643221659 2644331888 389
220 iso_pu_bacteria 2643221698 2644543644 389
221 iso_pu_bacteria 2643221712 2644615819 389
222 iso_pu_bacteria 2855730933 2855736739 389

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01053

Cys_Met_Meta_PP

Cys/Met metabolism PLP-dependent enzyme

30

408

0.94

PF00155

Aminotran_1_2

Aminotransferase class I and II

46

230

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
4itg-assembly1.cif.gz_B p113s mutant of e. coli cystathionine beta-lyase metc 0.9519 24 385
2nmp-assembly1.cif.gz_B crystal structure of human cystathionine gamma lyase 0.9465 24 385
4l0o-assembly2.cif.gz_E structure determination of cystathionine gamma-synthase from helicobacter pylori 0.9434 20 384
4l0o-assembly3.cif.gz_A structure determination of cystathionine gamma-synthase from helicobacter pylori 0.9427 23 384
3qi6-assembly1.cif.gz_C crystal structure of cystathionine gamma-synthase metb (cgs) from mycobacterium ulcerans agy99 0.9427 24 382
ID Description Score Start End Superfamily
af_A0A0P0VYR6_1_109_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9616 145 253 3.40.640.10
af_A4IBL4_19_270_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9544 23 253 3.40.640.10
1pffB01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9543 62 253 3.40.640.10
af_A0A0P0VYR6_1_109_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9446 145 253 3.40.640.10
af_A4HVY9_120_366_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9385 23 251 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A5J4TM11-F1-model_v4 Methionine gamma-lyase 0.9816 56 239 GO:0005737
GO:0016846
GO:0019346
GO:0030170
AF-A0A544VQ81-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9812 64 200 GO:0003962
GO:0004123
GO:0005737
GO:0008483
GO:0009086
GO:0019343
GO:0019346
GO:0030170
AF-A0A162C2Y4-F1-model_v4 Putative Cystathionine gamma-lyase 0.9763 81 219 GO:0004123
GO:0019344
GO:0019346
GO:0019450
GO:0030170
GO:0044540
GO:0047804
GO:0080146
AF-A0A833KQ90-F1-model_v4 deleted 0.9749 67 250
AF-A0A6B3IHU9-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9706 50 185 GO:0003962
GO:0004123
GO:0005737
GO:0008483
GO:0019343
GO:0019346
GO:0030170

Feature Viewer

pLDDT pTM Quality
91.8 0.89 High
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Predicted Structure (AlphaFold2)

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